Sample 3300003890

3300003890: Hot spring sediment microbial communities from Chocolate Pots, Yellowstone National Park, Wyoming that are Fe(III) reducing - Chocolate Pots Core 3, 1cm

Overview

Basic Information
IMG/M Taxon OID	3300003890 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0113905 \| Gp0109530 \| Ga0063162
Sample Name	Hot spring sediment microbial communities from Chocolate Pots, Yellowstone National Park, Wyoming that are Fe(III) reducing - Chocolate Pots Core 3, 1cm
Sequencing Status	Permanent Draft
Sequencing Center	University of Wisconsin, Madison
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	235094518
Sequencing Scaffolds	66
Novel Protein Genes	86
Associated Families	82

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	31
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1
All Organisms → cellular organisms → Bacteria → Acidobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	12
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1
Not Available	8
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Acaryochloridaceae → Acaryochloris → Acaryochloris marina	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis methanolica group → Amycolatopsis thermoflava	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Hot Spring Sediment Microbial Communities From Chocolate Pots, Yellowstone National Park, Wyoming That Are Fe(Iii) Reducing - Cp Core 3 , 1Cm
Type	Environmental
Taxonomy	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Sediments → Hot Spring Sediment Microbial Communities From Chocolate Pots, Yellowstone National Park, Wyoming That Are Fe(Iii) Reducing - Cp Core 3 , 1Cm

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → hot spring → sediment
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Sediment (non-saline)

Location Information
Location	Yellowstone National Park, Wyoming, USA
Coordinates	Lat. (^o)	44.427936	Long. (^o)	-110.588466	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000266	Metagenome / Metatranscriptome	1417	Y
F001012	Metagenome / Metatranscriptome	806	Y
F001115	Metagenome / Metatranscriptome	774	Y
F001186	Metagenome / Metatranscriptome	754	Y
F001269	Metagenome / Metatranscriptome	734	Y
F001564	Metagenome / Metatranscriptome	670	Y
F002140	Metagenome / Metatranscriptome	590	Y
F003912	Metagenome / Metatranscriptome	462	Y
F005988	Metagenome / Metatranscriptome	384	N
F006247	Metagenome / Metatranscriptome	378	Y
F007094	Metagenome / Metatranscriptome	358	Y
F007245	Metagenome / Metatranscriptome	355	Y
F007341	Metagenome / Metatranscriptome	353	Y
F008282	Metagenome / Metatranscriptome	336	Y
F009012	Metagenome / Metatranscriptome	324	Y
F009635	Metagenome / Metatranscriptome	315	Y
F009686	Metagenome / Metatranscriptome	314	Y
F009854	Metagenome / Metatranscriptome	312	Y
F013460	Metagenome / Metatranscriptome	271	Y
F013593	Metagenome / Metatranscriptome	270	Y
F013621	Metagenome	269	N
F013841	Metagenome	268	Y
F014829	Metagenome / Metatranscriptome	259	Y
F015187	Metagenome / Metatranscriptome	256	Y
F015199	Metagenome	256	Y
F018543	Metagenome / Metatranscriptome	234	Y
F019455	Metagenome	229	Y
F021375	Metagenome / Metatranscriptome	219	Y
F022735	Metagenome / Metatranscriptome	213	Y
F028464	Metagenome / Metatranscriptome	191	Y
F031713	Metagenome	182	Y
F033584	Metagenome	177	Y
F033997	Metagenome / Metatranscriptome	176	Y
F034766	Metagenome / Metatranscriptome	174	Y
F036462	Metagenome / Metatranscriptome	170	Y
F038776	Metagenome / Metatranscriptome	165	Y
F040218	Metagenome	162	N
F040370	Metagenome	162	Y
F041062	Metagenome / Metatranscriptome	160	Y
F042607	Metagenome	158	Y
F043249	Metagenome / Metatranscriptome	156	Y
F044025	Metagenome / Metatranscriptome	155	Y
F047896	Metagenome / Metatranscriptome	149	Y
F048656	Metagenome / Metatranscriptome	148	Y
F053117	Metagenome	141	Y
F053864	Metagenome / Metatranscriptome	140	Y
F053867	Metagenome / Metatranscriptome	140	Y
F059928	Metagenome / Metatranscriptome	133	Y
F064476	Metagenome / Metatranscriptome	128	Y
F064868	Metagenome / Metatranscriptome	128	Y
F064893	Metagenome / Metatranscriptome	128	Y
F065185	Metagenome	128	Y
F065824	Metagenome	127	Y
F066105	Metagenome / Metatranscriptome	127	Y
F067222	Metagenome	126	N
F067507	Metagenome	125	Y
F068995	Metagenome	124	Y
F069394	Metagenome	124	Y
F071164	Metagenome	122	Y
F073601	Metagenome / Metatranscriptome	120	Y
F073914	Metagenome	120	Y
F074102	Metagenome	120	Y
F076441	Metagenome / Metatranscriptome	118	Y
F076996	Metagenome / Metatranscriptome	117	Y
F078802	Metagenome / Metatranscriptome	116	Y
F082320	Metagenome / Metatranscriptome	113	N
F082323	Metagenome / Metatranscriptome	113	Y
F085272	Metagenome / Metatranscriptome	111	Y
F085609	Metagenome	111	Y
F085880	Metagenome / Metatranscriptome	111	Y
F088433	Metagenome	109	N
F091043	Metagenome	108	Y
F091441	Metagenome / Metatranscriptome	107	Y
F091530	Metagenome / Metatranscriptome	107	Y
F091546	Metagenome / Metatranscriptome	107	Y
F094469	Metagenome	106	Y
F095101	Metagenome / Metatranscriptome	105	Y
F096147	Metagenome	105	Y
F096549	Metagenome / Metatranscriptome	104	Y
F096811	Metagenome	104	Y
F097852	Metagenome / Metatranscriptome	104	Y
F100014	Metagenome / Metatranscriptome	103	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0063162_1000020	All Organisms → cellular organisms → Bacteria	237114	Open in IMG/M
Ga0063162_1000045	All Organisms → cellular organisms → Bacteria	188469	Open in IMG/M
Ga0063162_1000144	All Organisms → cellular organisms → Bacteria	95036	Open in IMG/M
Ga0063162_1000349	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	490794	Open in IMG/M
Ga0063162_1000668	All Organisms → cellular organisms → Bacteria	41932	Open in IMG/M
Ga0063162_1001178	All Organisms → cellular organisms → Bacteria → Acidobacteria	1890	Open in IMG/M
Ga0063162_1001679	All Organisms → cellular organisms → Bacteria	54429	Open in IMG/M
Ga0063162_1001741	All Organisms → cellular organisms → Bacteria	13854	Open in IMG/M
Ga0063162_1001891	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	23799	Open in IMG/M
Ga0063162_1002153	All Organisms → cellular organisms → Bacteria	57146	Open in IMG/M
Ga0063162_1002741	All Organisms → cellular organisms → Bacteria	66418	Open in IMG/M
Ga0063162_1003207	All Organisms → cellular organisms → Bacteria	56427	Open in IMG/M
Ga0063162_1003624	All Organisms → cellular organisms → Bacteria	27211	Open in IMG/M
Ga0063162_1003812	All Organisms → cellular organisms → Bacteria	19050	Open in IMG/M
Ga0063162_1004234	All Organisms → cellular organisms → Bacteria	46213	Open in IMG/M
Ga0063162_1004272	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1162	Open in IMG/M
Ga0063162_1004934	All Organisms → cellular organisms → Bacteria	56284	Open in IMG/M
Ga0063162_1004986	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
Ga0063162_1004991	All Organisms → cellular organisms → Bacteria	14002	Open in IMG/M
Ga0063162_1008210	All Organisms → cellular organisms → Bacteria	26814	Open in IMG/M
Ga0063162_1008931	All Organisms → cellular organisms → Bacteria	60182	Open in IMG/M
Ga0063162_1009025	All Organisms → cellular organisms → Bacteria	39047	Open in IMG/M
Ga0063162_1009781	All Organisms → cellular organisms → Bacteria	19639	Open in IMG/M
Ga0063162_1009822	All Organisms → cellular organisms → Bacteria	82523	Open in IMG/M
Ga0063162_1013119	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2258	Open in IMG/M
Ga0063162_1015125	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3059	Open in IMG/M
Ga0063162_1016154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5459	Open in IMG/M
Ga0063162_1016597	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1278	Open in IMG/M
Ga0063162_1017579	All Organisms → cellular organisms → Bacteria	43564	Open in IMG/M
Ga0063162_1018315	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	887	Open in IMG/M
Ga0063162_1019931	All Organisms → cellular organisms → Bacteria	4126	Open in IMG/M
Ga0063162_1020072	All Organisms → cellular organisms → Bacteria	11958	Open in IMG/M
Ga0063162_1031556	Not Available	522	Open in IMG/M
Ga0063162_1034735	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
Ga0063162_1036573	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
Ga0063162_1036602	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	987	Open in IMG/M
Ga0063162_1036692	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
Ga0063162_1036693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Acaryochloridaceae → Acaryochloris → Acaryochloris marina	1211	Open in IMG/M
Ga0063162_1036821	Not Available	1271	Open in IMG/M
Ga0063162_1045994	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
Ga0063162_1046535	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
Ga0063162_1047711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	968	Open in IMG/M
Ga0063162_1051333	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
Ga0063162_1052051	Not Available	1388	Open in IMG/M
Ga0063162_1068251	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	857	Open in IMG/M
Ga0063162_1070900	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	609	Open in IMG/M
Ga0063162_1083510	Not Available	2476	Open in IMG/M
Ga0063162_1083555	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	2281	Open in IMG/M
Ga0063162_1087314	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
Ga0063162_1089538	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	571	Open in IMG/M
Ga0063162_1093230	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
Ga0063162_1094415	All Organisms → cellular organisms → Bacteria → Terrabacteria group	616	Open in IMG/M
Ga0063162_1096238	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	977	Open in IMG/M
Ga0063162_1106438	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	770	Open in IMG/M
Ga0063162_1107052	Not Available	790	Open in IMG/M
Ga0063162_1110871	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
Ga0063162_1118953	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	781	Open in IMG/M
Ga0063162_1120581	Not Available	684	Open in IMG/M
Ga0063162_1121814	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	768	Open in IMG/M
Ga0063162_1126697	Not Available	908	Open in IMG/M
Ga0063162_1156289	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	848	Open in IMG/M
Ga0063162_1165782	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
Ga0063162_1166366	All Organisms → cellular organisms → Bacteria → Proteobacteria	664	Open in IMG/M
Ga0063162_1196808	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	825	Open in IMG/M
Ga0063162_1202811	Not Available	522	Open in IMG/M
Ga0063162_1214005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis methanolica group → Amycolatopsis thermoflava	513	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0063162_1000020	Ga0063162_1000020126	F091530	MKKTKPKQDAIMHAWVKAPERWQQLWDACEKGAGRYTHGLFVLEGKRLEPPKKTQGQLIAELLRSEPMGYLS*
Ga0063162_1000020	Ga0063162_1000020181	F091546	MRTYAHYRRAYDEMFARLEAEYDSLSLQEKSRRVLGKDNPLLYSSRAVAEKMDGPHLSRQAMERGLGRQTSQFESIAYHMLVQAPLRRIPLPDARWIFLDFSGQAGGWRYQRAEAVRKFCEAIAGKAPEAVCRFLSGGVASADILDRLLWEEFSQPGSSFRTTARHIHCRFQLWVAQSRSAIPEGECVQIV*
Ga0063162_1000020	Ga0063162_1000020207	F064868	MKAYRTESSYYFSSRQLLAAGTLVFFSEKQRRYVHPTAGVLLDPHPRLLALSDEESRKLEKEWQGALASL*
Ga0063162_1000045	Ga0063162_1000045124	F015199	VIWDRVFNVPGALKSEFDRTAAGLTVQVDYLVLEPIMLSTRFDQLWAGGLRDEKRDGTVLSFQVRYYPWPNLSFFVRDSVNLRAFVEENPLRSWRNQFFVGIDWNF*
Ga0063162_1000144	Ga0063162_100014420	F047896	MDTEEKINGSPAITDEPPLTNILNTHARIETQVGEIYVNFAVAFGQNPELRGLWSAMALEEGGHAALIRAVNKGLLAGAFQAKSFLLPLDIINDLVHRVEEYHRQAQAGVSLDQALRITWELECSELDFMRELLVASSNIAELGFPTNLESKDQHVSRLRELIQRYSSDEGLRREVKFLSAERFPR*
Ga0063162_1000349	Ga0063162_1000349312	F065185	MKITFDDKSFIECKKSDNPGKVVITISAKDHTDPLKKITNAVEITTDEFKKLISEI*
Ga0063162_1000349	Ga0063162_1000349325	F085609	MQDKVVAEAVRIEYEEKTGKLYIVFEVKDEKYKQDIKANWTKDIEFRLVDKSLVMG*
Ga0063162_1000349	Ga0063162_1000349357	F040370	MSSNNFFRSDLFGIYNIIQASMIVYPKEIVIATLRDFFSKDSYYHFSKDQWGFPNTVDHTDLPPGADLPYGPGAQPELNPHPILPTRLFIGENYRYDGIFYPAVLVKSGGSRYVPISINRDQGLVKYDNILYVDGYGNETIVRKPIAFLTSGAWEGSIIIDVMSRSLRARDDLVELIGMCFTEVHFDTLHEIGIVVKPISIGAPSETDDRNDKLFRQSLTLDIRTEWAREIPISNTIDAILFTASFGDLSKPNSPIAANLTVNTEVNTSDMLLKL*
Ga0063162_1000349	Ga0063162_1000349403	F069394	MIKKSYSVQMSYDVTDSERHQAERALVYFKAAEKYLTQASDHLNIMKTPFKDNPDMTPDDVMKARAVIRRFRDKAIENFDRFKKVAFDCVNLMQTFSSDTQTLKLMKSFISSVDDLEVSVNQFADLFNDLQSKDFVKDVVSAIESIQKQCDEIDEIIDERIKSHIQTNILATSWVDSISNDLQMKIEKKTPLIVDLYNQRQEQLNEAVEERSTGSSQEKW*
Ga0063162_1000349	Ga0063162_1000349417	F094469	MNKNALKKILEHPDKDEIIAKLVLDYPPKDIHEWLAGKYTNVSEAKFVVAEKSIKVFKDNYLDVYSMIREDMMKTKQAVATSTEEQLELAVKNNSTYKSKMLELAGKEIDVRQMVAHLCIAIETRLGQVFDEIQEDPRNINTKIDRVLIEYGELLGGLLEKYYKFTENPADMVIQHNVTLQAVDQHISVFHDVIRDVLSQLDLESSMLFMELFQAKMAKLKAPTQEKPLNTDMKLAEAKLLNETINQKLNNQ*
Ga0063162_1000349	Ga0063162_1000349418	F071164	MRISELLNAMASWLESPNNEALLLAEADEKCMQVVAESCVLAAALLKKAADEVDVLEPPSASAITPESVEETAALAQALDESGDPQLKRVASVLDELLLTIAAPPNAYAERKDLVDSRAEEIRKKYEGPRKDLHKYNQIEKSEKAIENSGFTKEYKILEAPLSSRYCPDHPGAQIARVGEHVWQCELDKKTYNFETGFELANGSKVPGGDVSQQTNGLDTPFHAIFDTREGRLGYNK*
Ga0063162_1000349	Ga0063162_1000349421	F038776	MPKFNIDYSGLANQITKRAYRLSDVKDQLETVAFDVVRFKDGDKGAELWQVQSADDGDYIVALYDEEEVEKTASANPWGVYVSKNGHDLQVSYKGDPLVRFAASKLGIPSSELHKAEQYLPEKLATNKKLVKALLSELSETARLEVSKRYPELV*
Ga0063162_1000349	Ga0063162_1000349431	F036462	MSQPVRLGDVLGSNLEEDFKNFDLTEIQKVLEQLRDADAIDLAHAELLQQQALRGADILADYLAKMVKTVAYLESKVNSTKNKVSLDYVAPDGSRTTVDMKKWAGESSPEVEAVQIKLAEAKGGKMALDRKYEILIKAHHHFKDIAGGLRKTILGYSSGAGNAPGEGYE*
Ga0063162_1000349	Ga0063162_1000349432	F042607	MAVRVVDNKKLEMTDDEWDMYQKICKSYTDMTGKGEDLFMDLFETNDDGIIVFLKPPSKRRTSLEVFLFLMSLMQHQHLRLMHQQIDEAVAEIKKNNKATK*
Ga0063162_1000349	Ga0063162_1000349444	F096147	LSDHTQNFLIEKAINTFVYAQMSVEALKKNFVPKYLATGEQKFYRFLILYALNKLIYIEKGSFKGKSPELEFLDYYDQFIILYRREGEDVYLELARVFRKAAHKVYRVMLKKNMTERNAKFLNLV*
Ga0063162_1000349	Ga0063162_1000349465	F091043	MDVFHRNISSFFEELLNDLQCQRDTKAYIVSIYGKFKTAEFDLSKDSVTLLFAQARDKQDFLVYQNLGDWIFFANTIAPQHLQFASKEYYDTVARLSYYSCYKLINREWKLFEELADDFLFLEEQVRQRLPKLNMKTSEGIYIDPFGS*
Ga0063162_1000349	Ga0063162_1000349481	F074102	MKKQKTIVPFHFKDMTHQQMVDYLNEVYPVSLKHNEDLVNRVHARYPVLDKSEVGIIVKAVFASFRDLLVLGKILNFNSLFFDTKLHFFDHRRGGRILPSLKVRISTPPKLRKHDK*
Ga0063162_1000349	Ga0063162_1000349486	F031713	MSNKNVTIDLKARKDIDGQTFYVGKIKAPVLIDCSMGAVFLVFVSDKGDEQLQIALMDNKELDD*
Ga0063162_1000349	Ga0063162_100034997	F009686	MTEREMFEKSFQRPKNYFKLSAREQWDIDARLGILDWNGDGLTEEDLKRFDEHYEK*
Ga0063162_1000668	Ga0063162_10006682	F013460	MNQPQEMDVGKTRHCLEVLHAVQTDSRTSAWYWGDVRGKAAVGAATTALWRRDLICARVGPPPFQLTAKGEAFLQAHKKEWEAFLANPERRELVEHFSQALQQLPEVQEARDVS*
Ga0063162_1000856	Ga0063162_100085649	F007341	VKSEGNESREGAAALASTVFADSAFKHGDTEEDFYELLAGRYLKDRSRRGVDAVYELLERNFAGNYLHVVYRILPDGRVRVFHMARMTSTQKRLYRRRLHR*
Ga0063162_1001178	Ga0063162_10011781	F097852	LIAKPLSIEGMGCKSGGCALKAVKLTSGDLPLVLDTGLRIERLVLTGRQKSAADEVVRRRTKVQTVLRKEGKGKGK*
Ga0063162_1001679	Ga0063162_100167920	F008282	MRRTRSVVGFLLCAALAVAFVASAMAGAASTAKVMPYEGQIKAIKVDKCGLQPGSCEGSIILARAGGAGEVTLAIKPGTWLKRGDQFVTIDELGVGNYVKVEAIQIPGIELQQISVLSTGGGD*
Ga0063162_1001741	Ga0063162_10017415	F048656	MFEKTREVIRKDRYGFPEEEFPHRAIIVGNPHANLSRKELSHIAGFDPILAGDIRDNPAYKSHLPPSKDNYLFTVTVTADLLGGTRNLVFDGTRLYLVHGDRKYHLGDEGLIRRRMAHLGIKARDLAKLFESLEEQILHAVATVRGPRVAPEEEAIRQ*
Ga0063162_1001891	Ga0063162_100189117	F043249	MPKIVGTRERIHQPFYDSLLRVDGSGDLRQANVGVFGAVQSRSQLFTKQGADIAVSNLTTGGFFPSDQTFVTLAVRVWTYFRFNWESPRSTQGADQQFASINAGAATPVGADTTSGSVVGDRIARVHKLYNQTQNQLFWQFQAGDKPQLTTYTAYTPFAGGLDGFFADSRLPRANNGIPTSSALMRLARPILIPPRQGFVVIAIASSIGQATGASVVEQFNGLVPNNDIWGNGPNGTITGNIGTTGLSVSGRDDIEKDVKYLIDGIHSRDVL*
Ga0063162_1002153	Ga0063162_10021531	F078802	MFMTEVLGRCSQLEQRLADIYSQFAGSLNDEKELESFWLGMAEEEKHHAKILAAEKAALEVDSDAGYFMPEFPAKLAEMDTLLKLIEEKARMGVTKEEAFELALQLEQSELNTIYRDLVLMGRAAVKLMARHMDESLSLPRHQQGLLAGTKRFLPPGPVRQRAEAWATQRHMA*
Ga0063162_1002741	Ga0063162_10027413	F064476	MGQTHNEITQNLAERLCWEVARRDDSRVARRQYRRQLVDGVYRLDEGALLDDFFTSCRPSA*
Ga0063162_1003207	Ga0063162_100320710	F076996	MKIDKILAVYKSSPLLLVVESEEGKLCELSFKDLKDAGHNFSDAAWKSLVEDYQIFDCQHASR*
Ga0063162_1003624	Ga0063162_100362412	F014829	VRVRERIAGTLHQYVGLRAGAGWAQDSLRGTASLSGRRKFNKFFYDGELVLRYPVRAGVGSVIPYVLGGAGAVTLHRLDTSTSEDFTKFAGNFGAGLEYRYQRIGVRAEGRDLVYKFDRFGFDKTQHGIVWDAGVTVSF*
Ga0063162_1003812	Ga0063162_100381213	F033997	MSKVLELPEETYERLLALAQQRQCTPEELIHIFLIDYDQARYYHANQQMLAQGILVSIPRTPCGIENPFTPVEIPGPPLSRTILDDRR*
Ga0063162_1004234	Ga0063162_100423413	F053864	MHAKGHTTTWGMHIGVGRGRDAKGWYQQLKEWWAAHKVAREEARLAALRAQWDAKRETVMPYRADSAADMAVTQHAVSIATMLYGLNQ*
Ga0063162_1004272	Ga0063162_10042721	F018543	QESEFHDMMPNQCAAANRRPAGQSDGSGNLAATVAADRAFPAAVAELGR*
Ga0063162_1004934	Ga0063162_100493432	F053867	MWRSTRDERMPPRRYDTARIEVRCRVTARHSRQLILEQATIYADGWASWLEDGHVYVGYVQGGRCCDPPEVSTL*
Ga0063162_1004986	Ga0063162_10049861	F096811	ESFARMLKDSDFAAEAKKFLDWDGVTSLSGAELEKKMIDTITQPPGLIKRIKDVLAES*
Ga0063162_1004991	Ga0063162_100499112	F082323	MKSARVSMGLIVALALVMGAGVGLAHITPPVLLVSERDAVLGMTGGSTRFFVREVRLTSEERDVIERQWGWRPEDEVYRFYLGRDEAGQLVAAVTFLTEYTIHGPVRVAVGIGSGGKIKGAHVVELTEETYPWLKPLLDQAFTQDYIGRDSRASFGLGERVRRANPESMPQFYAQIVASLIQRGAILFDVAILKRGGGKA*
Ga0063162_1008210	Ga0063162_100821016	F095101	MAVTCDFYGLEEEKVTLEVEERFLQEHQLFDFEGERYIILSVVWAKDGPKANVMPYWEYTSLQEKTQRGIAWTAEDEPEPPLVREIDRRRRTS*
Ga0063162_1008931	Ga0063162_10089315	F041062	MPEFIVAIDRITYYAVRAADEVTAIDRVLEGQGQEIASETRDAYIAEYQTRDS*
Ga0063162_1009025	Ga0063162_10090253	F009635	MLSDGRYITDEEAARQIQVAPITFRRWLTVGTMPQFEFEGTSYVLQSDVDAFIEGCQCRNQRRYS*
Ga0063162_1009781	Ga0063162_10097815	F000266	MDRCRHIIAVSVGVMLTIFPVAIAGEGIPRLTFAQLVDSIKAELEVTQKIKSYAGKEVEIHGFIVPAGLPDLSFFLLSRVSSIGNYCCEAPVGQDETVYVFTAKAPRITYDPLKVYKVRGIFEAGLERDQVYGLSLFRIRQASVEEAVGAKILKVEGVNTAPIRQ*
Ga0063162_1009822	Ga0063162_100982223	F100014	MMERDTHDKPLKRNKGFIFQNADKRRVLDFTEGRDPKKFLHRQMQDFSEAELQELQHKIETWVKSPRVMPTYPETVIEEY*
Ga0063162_1013119	Ga0063162_10131193	F013593	MDINYNLETLTGKHGGLLEVVESIISDGRLILILTDEDVLQHRDAPLKGVFYRLILPLAPATMNVKGEAFGLIRESLKFTEDGASLEKLARGIGR*
Ga0063162_1015125	Ga0063162_10151251	F001186	MTPQDSRTTRLKEYIANVLPWAPGHQLKGMTTFVDAIIEKQTGAQAKLARGLGNQGAAVKRRSRLLHKARLAPHRVADAVVAQALRQLPPKGKVRLAIDWTSEGSQHLLVVSLITGGR
Ga0063162_1016154	Ga0063162_10161542	F034766	MPDAPRKYKLITEEQVRAARRYWPQVSDKTWTLTLKRTDEPLVLNRAAHKGVGFVTITVPAPEQTRDGMFYRKDIDVLILVSGETQPAQ*
Ga0063162_1016597	Ga0063162_10165972	F044025	MAKKWKSVWVFLLAAFILAGCQHNYYTSKAKNKDCGCPNKKGMVGY*
Ga0063162_1017579	Ga0063162_101757918	F082320	MDERKMEIEFEDIPLEEARKMGRGPRMDPILYTALKSKISSLSNNAARMNLPPGVSPVTMKNRILRVAVELRVPVTVRRVPGGLLFWRSTDEDIKQAREVAARLQAAQQRRTGARSRRRRG*
Ga0063162_1018315	Ga0063162_10183151	F053117	YRWKQIYQRGDEFYDWDGHAFHFIGGIPRKGDGSLALYQTKDQEEYLKELQESLKKGAQP
Ga0063162_1019931	Ga0063162_10199312	F068995	MAKRIPPAAVKLTKAVHPARPDWTYHVLEPDKRTVAALAKAPRFLRGCDRPCTKTMTLLPRSQIQGHTGIGYQMINVDGYRWVNAYVISDALNSTNQRGFTLEISFSLHPFVYGVGVVGEARYFFNFDAFYDPGAGSHKLIRVETSDLTSTGGLPHIGGVDLTHILRVPVMGPYLRASVFNEDTVARHATVEAYLTT*
Ga0063162_1020072	Ga0063162_102007210	F053867	MLPRRYEAARVQWRSRVTTAHVRQPIPEHATIYTDGWARGVEDGHVSVGYVQAGCCCDPPEVSAL*
Ga0063162_1020072	Ga0063162_102007215	F085880	MAIQYKVIELKGRPDPRSAGETPEVTAEAIETALNQQGRANWELFTILERFTETSHTEASPYAGIGSSSHQYSARIAVTLIFKKVTA*
Ga0063162_1031556	Ga0063162_10315561	F085272	MTRXXXXXKTEAFYTGVLGFKVAFRHPPGMLFLTTPGSGDLINFVKSAKKSSGTQGLEHIGFKVTTGGLKRLEKTLKKNRIKIDGRRGQEA
Ga0063162_1034735	Ga0063162_10347351	F009012	MSGGFMTLEEGLTYTMNVEVYLQAAVVRGVLTTNQDRLSNFLIVRRGEEVFGLQDASVESIHGKTVSVAADKYLIYLQEVFLIADLSSQGRTRRSGIDNLYVQKDRAKAFLSVGPYLVQGNVHLLPGSALHDLLMEKSQFIPVTEAVLIDRRDIEPRTYLVNRTKVGFMTA
Ga0063162_1036573	Ga0063162_10365732	F007094	MESATHKDESYSIHYNQETFKAAICHRCGAKMFPADLLEAHMDRHELKDMYIQSELKKLQYAMNRMR*
Ga0063162_1036602	Ga0063162_10366022	F091530	MKQKKSKQDELMRAWVNSPERWQQLWDACEKGGGHYTRGVFVLNGKRLAPLEPPRRKTQGQLIAELLKSEPMGYLS*
Ga0063162_1036692	Ga0063162_10366924	F001564	REELCDPGLCPDAPVDGGRCDHCPLDRLDTAQSSEAGLLLRRALDLRAALKLGVQIGLDEIRADEFRAMLTVEEERERLDRERFEDRRP*
Ga0063162_1036693	Ga0063162_10366931	F001564	HRRARRRLRGVFGPKLTCGEWPEKPSLRFLIHWALRREELCDPGLCPDAADDGGRCDHCPLDRLDAAQSSEAGLLLRRALDLRAALKMGVRICLDEIRADEFAALVKLEGEQAEFEREKAAMPPH*
Ga0063162_1036821	Ga0063162_10368211	F073601	AGCPLLGVSLAWGRAMLQAKVTCLVMALPAKRREGQRMFWLLHFAWRCAIKIMACGSIIRTLPVEKKALAGMGV
Ga0063162_1045994	Ga0063162_10459941	F003912	APAPMRYASILRCIGQSVEAMDLKAIEVRTHGDDFIVQAWHRGTSMAMDLEKHYTPEEIRKLEAEGRKRRRPFAGPPNLLSLSQVLRWGGNYVDRMGGRLLRVSWQDQSDRIQSLTVQWEAVQPGKPTGESQTATVDELCIHIYKRRKKINLVTERQARRPFVSVSRT
Ga0063162_1046535	Ga0063162_10465352	F013621	MISQEEAKDFIRRYREVILETPFGEIHVCGSKEVYEELIGQGKLAFSPIELFQLQKATENGSLETIVKIKNSVPGARIKDIIPVDKKPDSTQKQS*
Ga0063162_1046535	Ga0063162_10465353	F067222	MDKPFLQTLNLYRSKSALQISPSPELALVFVSLASVIPGMENKMPDKNTKKYLWDKKLTASFNFEGALEVAAAATALAEGKESLVADSKGTLPSWYRDPAKCGRDGNAKIIGFYRPKDPPTGSKVRYFLGITENNKSKDGQ
Ga0063162_1047711	Ga0063162_10477112	F091441	MTLAELQERREEIVRSLGVTRVQFGERSVEYGRQREALELIDREIAKLTQAGEQRVFTIKTSRGLE*
Ga0063162_1051333	Ga0063162_10513332	F073914	MNLKERTYLWYLSVLRIYIGYYLLWQGIRKYQRDFPKGDWIGRQIGDIGTLDLYPWYKSFLQHYVV
Ga0063162_1052051	Ga0063162_10520513	F078802	MFMTEVLRRCSELEQRVSDIYSQFAGSLNDDKQLESFWLGMAEEEKHHGKILAAEKAALEVDSDTGYFMPEFPAKLAEMDALLKRAEEKARIGVTKDEAFSLAMELEQSELNTIYRDLVLMGRAAVKLMARHMDQSLSLPKHQEGLLEGIKRFTPSEAIRQRAELWAKENRVA*
Ga0063162_1068251	Ga0063162_10682512	F059928	DADAVKSAGFAVIISKAPVLGREVTPQVIVMVHELPEPPGDLVAACERLRTGMSEPETVTPTQVVRLDGRSAARLDFKGLVDGVLVRATALCTFRDRRAFVVVGQALAAEFEAEASTFDAVLQSFRLR*
Ga0063162_1070900	Ga0063162_10709001	F065824	MKRNKQLALAALGFFLSGCTGMTKNQAALVGAATCGAMGAAGG
Ga0063162_1083486	Ga0063162_10834863	F040218	MQGSDVVIWVWPVFLTFTPAHRALGRKREESGTQLHEARLKPYHVYFEGNAGLLARDYAKFPNKVLWKLAEKVRDVVAAGRVVRLEDSLGTNLTATYDGARLYGMQFRAGDPPGRCHFPWGRCGVFNGEGQADGEVYLSCVQGVAGMLPEPMRWKVKDNIITEVDGGGEVGEE
Ga0063162_1083510	Ga0063162_10835102	F033584	VVARFRKVIHATPTNLPDREYGPKLVCDKCEGNGFYLTEKKQIKKPCTACEETGKILEPKLGFPCSTCRFKNHCWPGATLQFDGKKPVWVVPREVAEMTPVLHLHEHLNGNSVGNSSAKSLPGNDQPDDVELF*
Ga0063162_1083555	Ga0063162_10835552	F015187	LKKLQDEVYIQQRTPLDKPYPKVDSILIVANGNSATQRIMEEVIPLFVDRLKKRGVASTSIFVSYSDQRINEATFDNRKYSYTFWIYEQNKKMQQLDGYDYLVPLAMKLTDNKNADNVWIATSIYNNMVKKPYYRERYAGTLMFLFRANGMVQ*
Ga0063162_1087314	Ga0063162_10873142	F028464	GTPRKHPNFRHIDGSVFNARLYIDGRLLVDRHGMLDRALLYHPEVLEVASEFGDPYQVLAPVSHEAHGSGTLW*
Ga0063162_1089538	Ga0063162_10895381	F006247	MKKARRLVLLVVAWTLWTRTQTPTSDSWLPAPGLPSLEKCEASIKEKLDLWRQFKDAKFSGNSVTFTSNNSTMTYLCLPENEDPRKAPPAKPVKPK*
Ga0063162_1093230	Ga0063162_10932301	F001269	RVVKTVRIERKREVAVRPEGDRLNKCKSEVAEESTNFYATNFDLGAIPPLFIHQLSRSRWRIDAEVFQTLTTDCHLKHPAVHQSTALVVLTMIRVLAYTLSLVFYHRQVRSHARGPCASFHEFAKRLAYVFAALAPDTS*
Ga0063162_1094415	Ga0063162_10944151	F076441	MSLLLIAVFSFLSAVSLVVILFMLPMAVQETPQARIKRRLTSIGRLQHASRAEIQNLLKTSV
Ga0063162_1095298	Ga0063162_10952982	F019455	MVSNSLKMDQGEVVAALKRLRANHSDDPEYQRLRKDLPRSWPI*
Ga0063162_1096238	Ga0063162_10962382	F064893	MSKIIRYEFMGSWFRFWLMCLTVIGIPFAVLYLIDGTLRIEHEIDDPERFVEAFRSGKLTKKS*
Ga0063162_1106438	Ga0063162_11064381	F001012	MTPPTGPVAKLVQLLADEARVDERIRDTQAALASVKKRISESLAQHYIATREPRIQLPEDLMREEQSYERLLQALKDMKNEIAKQIRPVEEQIIQANIDHLRQTFNQESRRLSKCLEEIDDNILACRQYVQDYERIRSGLFALNEKLTQLGAESXXSPRQGRKRHVRNRA*
Ga0063162_1107052	Ga0063162_11070521	F088433	VILAHSELEAMYAYLGMVLQGEMIQALFTGLRPLVFLLLVIGIVWAIGSMMVRGRAQNILLYLVLAVASLVLLKQTMVADSQALITGNSGSSIAQANTGARVNTIFFAVVRAYDAVLSSLMKILDRGFGKNVAFETAPFASTRGMMWAMAQTMDDAETIREAGKFLSQCLAPAETRLQNANQKGSISGIFGGLGDLVTRPDDQATANTRAALQEIVPVDGPATCLEWANQIKSRFGTWL
Ga0063162_1110871	Ga0063162_11108713	F066105	MAESSTKNPAQRFSRLFRKGGVFLGKGQLPEALAAFREGEALAVSLGDEQRLTLFREEIARCLEQLSRKPH*
Ga0063162_1118953	Ga0063162_11189531	F002140	VDDVKSQMEGVTRVYMELDNKISDKGGVQNLFGMNRKIRQALESITIGELDSMLAEIHRAKEGLTRLQEDVVEIRLLKEVLSAPVSRGNGQGRA*
Ga0063162_1120581	Ga0063162_11205811	F013841	MKLLLATMFRKVPVRNTKQRATLCKRCGTRIYSLSFLKAHLEAHNKRSQ*
Ga0063162_1121814	Ga0063162_11218142	F001115	MKNDLQNLTEDISRLYEDITQKADSLGQIDSITRLYDELQAQLQAISLEDVDLLQSQIKSTLEQMIGISKSLAVIKTLKITLNGHDELAEFAKKLTGGKETRRALEDR*
Ga0063162_1126697	Ga0063162_11266972	F005988	EQFAFHRALRSEEVRIQFRGDALDLSEFENVEVSPGEVTIIPLGIAHSVISIPPEDENFLRLNFYSKLRWRVPIDPTKHCFDSQFEVTTTVHQQAEWRKKLAASR*
Ga0063162_1156289	Ga0063162_11562891	F009854	MSENETRAELFVALRELSEIVSEMRAGQLMAAVGELCADLHGRGLWDATDAELLEAVWQFRRNFKAAKVSPAKGLANG*
Ga0063162_1165782	Ga0063162_11657822	F021375	KPKTFNIPANLVESVRRKIEMRRRFDAAAAAICGINLKRFLQEKEDQ*
Ga0063162_1166366	Ga0063162_11663661	F007245	MPPVRALLIALVLATAATSPARGIASVTVFGLKAPEEVGGFTLNDSTNFERSKPGDGYGLDYSQPGWKLDVFIYDLKRVAIPDDPKSAIVRAEFERSREDAFLAQPRGIYKQVYLRRNFTIEDGAKRTRFQCAAFHLTRDGAKPQDGFMCVTAWNNKFVKLRLTTLSDRDSEASARKHVAAWI
Ga0063162_1196808	Ga0063162_11968082	F067507	PSRAGIAVIKSFLDKNEPAVRRLSIDDQIDDQFVRELEESGFFANLQRGK*
Ga0063162_1202811	Ga0063162_12028112	F096549	MMGYCEFFDTEEEAIAACREVNRGLNSKNPACCVVVDGPEDNYAVVDLETAKDLLDFGGESPLPCLVVTD*
Ga0063162_1214005	Ga0063162_12140051	F022735	MAKISRSNPDNIAKPFSNYSHVVTVEGAQKLVFCAGQVAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300003890: Hot spring sediment microbial communities from Chocolate Pots, Yellowstone National Park, Wyoming that are Fe(III) reducing - Chocolate Pots Core 3, 1cm

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences