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Sample 3300031372
3300031372: Leaf surface microbial communities from wheat plants in UC Gill Tract Community Farm, Albany, California, United States - DLSL W.R1 (v2)
Overview
| Basic Information |
| IMG/M Taxon OID | 3300031372 Open in IMG/M |
GOLD Reference
(Study | Sequencing Project | Analysis Project) | Gs0133512 | Gp0294697 | Ga0302347 |
| Sample Name | Leaf surface microbial communities from wheat plants in UC Gill Tract Community Farm, Albany, California, United States - DLSL W.R1 (v2) |
| Sequencing Status | Permanent Draft |
| Sequencing Center | DOE Joint Genome Institute (JGI) |
| Published? | N |
| Use Policy | Open |
| Dataset Contents |
| Total Genome Size | 435636554 |
| Sequencing Scaffolds | 0 |
| Novel Protein Genes | 1 |
| Associated Families | 1 |
| Dataset Phylogeny |
| Taxonomy Groups | Number of Scaffolds |
|---|
Ecosystem and Geography
| Ecosystem Assignment (GOLD) |
| Name | Leaf Surface Microbial Communities From Various Plants In Uc Gill Tract Community Farm, Albany, California, United States |
| Type | Host-Associated |
| Taxonomy | Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Leaf Surface → Leaf Surface Microbial Communities From Various Plants In Uc Gill Tract Community Farm, Albany, California, United States |
| Alternative Ecosystem Assignments |
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant surface |
| Location Information |
| Location | USA: California |
| Coordinates | Lat. (o) | 37.8864 | Long. (o) | -122.2981 | Alt. (m) | N/A | Depth (m) | N/A |
Location on Map |
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Associated Families
| Family | Category | Number of Sequences | 3D Structure? |
|---|
| F081732 | Metagenome / Metatranscriptome | 114 | Y |
Associated Scaffolds
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|
