Sample 3300023552

3300023552: Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300023552 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128948 \| Gp0290769 \| Ga0247551
Sample Name	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	12682223
Sequencing Scaffolds	85
Novel Protein Genes	92
Associated Families	81

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → Narnavirus	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7
Not Available	58
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	5
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → unclassified Narnaviridae → Botrytis cinerea binarnavirus 5	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1
All Organisms → cellular organisms → Bacteria → Acidobacteria	2
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → rhizosphere → soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Czech Republic: South Bohemian Region
Coordinates	Lat. (^o)	49.0448	Long. (^o)	13.618	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000218	Metagenome / Metatranscriptome	1552	Y
F000968	Metagenome / Metatranscriptome	818	Y
F001024	Metagenome / Metatranscriptome	803	Y
F001380	Metagenome / Metatranscriptome	709	Y
F002988	Metagenome / Metatranscriptome	515	Y
F003336	Metagenome / Metatranscriptome	493	Y
F003384	Metagenome / Metatranscriptome	490	Y
F003427	Metagenome / Metatranscriptome	487	Y
F003812	Metagenome / Metatranscriptome	467	Y
F004178	Metagenome / Metatranscriptome	449	Y
F005215	Metagenome / Metatranscriptome	408	Y
F005244	Metagenome / Metatranscriptome	407	Y
F005356	Metagenome / Metatranscriptome	403	Y
F006559	Metagenome / Metatranscriptome	370	Y
F006591	Metagenome / Metatranscriptome	369	Y
F007311	Metagenome / Metatranscriptome	353	Y
F007725	Metagenome / Metatranscriptome	346	Y
F009017	Metagenome / Metatranscriptome	324	Y
F009606	Metagenome / Metatranscriptome	315	Y
F010305	Metagenome / Metatranscriptome	305	Y
F010621	Metagenome / Metatranscriptome	301	Y
F011395	Metagenome / Metatranscriptome	291	Y
F011567	Metagenome / Metatranscriptome	289	Y
F012875	Metagenome / Metatranscriptome	276	Y
F015340	Metagenome / Metatranscriptome	255	Y
F018722	Metagenome / Metatranscriptome	233	Y
F019067	Metagenome / Metatranscriptome	231	Y
F019691	Metagenome / Metatranscriptome	228	Y
F020134	Metagenome / Metatranscriptome	225	Y
F021919	Metagenome / Metatranscriptome	216	Y
F022206	Metagenome / Metatranscriptome	215	Y
F022483	Metagenome / Metatranscriptome	214	Y
F023505	Metagenome / Metatranscriptome	209	Y
F023657	Metagenome / Metatranscriptome	209	Y
F023797	Metagenome / Metatranscriptome	208	Y
F024050	Metagenome / Metatranscriptome	207	Y
F025098	Metagenome / Metatranscriptome	203	N
F025284	Metagenome / Metatranscriptome	202	Y
F025750	Metagenome / Metatranscriptome	200	Y
F026569	Metagenome / Metatranscriptome	197	Y
F028056	Metagenome / Metatranscriptome	192	Y
F028342	Metagenome / Metatranscriptome	192	Y
F029165	Metagenome / Metatranscriptome	189	Y
F030305	Metagenome / Metatranscriptome	185	N
F030619	Metagenome / Metatranscriptome	184	Y
F030627	Metagenome / Metatranscriptome	184	Y
F030865	Metagenome / Metatranscriptome	184	Y
F031388	Metagenome / Metatranscriptome	182	Y
F036354	Metagenome / Metatranscriptome	170	Y
F036818	Metagenome / Metatranscriptome	169	Y
F038944	Metagenome / Metatranscriptome	164	Y
F040634	Metagenome / Metatranscriptome	161	N
F044295	Metagenome / Metatranscriptome	154	Y
F047359	Metagenome / Metatranscriptome	150	Y
F050385	Metagenome / Metatranscriptome	145	Y
F058585	Metagenome / Metatranscriptome	134	N
F060406	Metagenome / Metatranscriptome	133	N
F060503	Metagenome / Metatranscriptome	132	N
F060530	Metagenome / Metatranscriptome	132	Y
F062326	Metagenome / Metatranscriptome	130	Y
F062337	Metagenome / Metatranscriptome	130	N
F062493	Metagenome / Metatranscriptome	130	Y
F064310	Metagenome / Metatranscriptome	128	Y
F065302	Metagenome / Metatranscriptome	127	Y
F067292	Metagenome / Metatranscriptome	125	N
F067447	Metagenome / Metatranscriptome	125	N
F068527	Metagenome / Metatranscriptome	124	N
F069404	Metagenome / Metatranscriptome	124	Y
F069578	Metagenome / Metatranscriptome	123	Y
F070391	Metagenome / Metatranscriptome	123	N
F073807	Metagenome / Metatranscriptome	120	N
F074242	Metagenome / Metatranscriptome	119	N
F074807	Metagenome / Metatranscriptome	119	Y
F080954	Metagenome / Metatranscriptome	114	Y
F084660	Metagenome / Metatranscriptome	112	N
F086433	Metagenome / Metatranscriptome	110	Y
F089654	Metagenome / Metatranscriptome	108	Y
F092084	Metagenome / Metatranscriptome	107	N
F095180	Metagenome / Metatranscriptome	105	Y
F098405	Metagenome / Metatranscriptome	103	Y
F105999	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0247551_100071	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → Narnavirus	2129	Open in IMG/M
Ga0247551_100420	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1165	Open in IMG/M
Ga0247551_100517	Not Available	1083	Open in IMG/M
Ga0247551_100550	Not Available	1065	Open in IMG/M
Ga0247551_100564	Not Available	1056	Open in IMG/M
Ga0247551_100586	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
Ga0247551_100668	Not Available	1008	Open in IMG/M
Ga0247551_100676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1004	Open in IMG/M
Ga0247551_100995	Not Available	900	Open in IMG/M
Ga0247551_101156	Not Available	855	Open in IMG/M
Ga0247551_101164	Not Available	854	Open in IMG/M
Ga0247551_101214	Not Available	841	Open in IMG/M
Ga0247551_101353	Not Available	816	Open in IMG/M
Ga0247551_101361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
Ga0247551_101403	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	810	Open in IMG/M
Ga0247551_101417	Not Available	808	Open in IMG/M
Ga0247551_101471	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	802	Open in IMG/M
Ga0247551_101486	Not Available	799	Open in IMG/M
Ga0247551_101499	Not Available	797	Open in IMG/M
Ga0247551_101511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	796	Open in IMG/M
Ga0247551_101514	Not Available	796	Open in IMG/M
Ga0247551_101519	Not Available	795	Open in IMG/M
Ga0247551_101565	Not Available	788	Open in IMG/M
Ga0247551_101590	Not Available	785	Open in IMG/M
Ga0247551_101795	Not Available	757	Open in IMG/M
Ga0247551_101841	Not Available	749	Open in IMG/M
Ga0247551_101894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
Ga0247551_101955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
Ga0247551_101956	Not Available	732	Open in IMG/M
Ga0247551_101965	Not Available	731	Open in IMG/M
Ga0247551_102178	Not Available	705	Open in IMG/M
Ga0247551_102180	Not Available	705	Open in IMG/M
Ga0247551_102195	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae → unclassified Narnaviridae → Botrytis cinerea binarnavirus 5	704	Open in IMG/M
Ga0247551_102481	Not Available	673	Open in IMG/M
Ga0247551_102533	Not Available	669	Open in IMG/M
Ga0247551_102601	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	664	Open in IMG/M
Ga0247551_102840	Not Available	649	Open in IMG/M
Ga0247551_102922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	643	Open in IMG/M
Ga0247551_103091	Not Available	629	Open in IMG/M
Ga0247551_103322	Not Available	615	Open in IMG/M
Ga0247551_103365	Not Available	612	Open in IMG/M
Ga0247551_103730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
Ga0247551_103740	Not Available	591	Open in IMG/M
Ga0247551_103886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	584	Open in IMG/M
Ga0247551_103920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	583	Open in IMG/M
Ga0247551_103931	Not Available	583	Open in IMG/M
Ga0247551_103937	Not Available	582	Open in IMG/M
Ga0247551_103947	Not Available	582	Open in IMG/M
Ga0247551_104096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	576	Open in IMG/M
Ga0247551_104104	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	576	Open in IMG/M
Ga0247551_104107	Not Available	576	Open in IMG/M
Ga0247551_104261	Not Available	570	Open in IMG/M
Ga0247551_104330	Not Available	567	Open in IMG/M
Ga0247551_104364	Not Available	566	Open in IMG/M
Ga0247551_104450	Not Available	563	Open in IMG/M
Ga0247551_104462	Not Available	562	Open in IMG/M
Ga0247551_104485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	561	Open in IMG/M
Ga0247551_104512	Not Available	561	Open in IMG/M
Ga0247551_104544	Not Available	559	Open in IMG/M
Ga0247551_104564	Not Available	559	Open in IMG/M
Ga0247551_104565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	558	Open in IMG/M
Ga0247551_104597	Not Available	557	Open in IMG/M
Ga0247551_104612	Not Available	556	Open in IMG/M
Ga0247551_104738	Not Available	552	Open in IMG/M
Ga0247551_104875	Not Available	547	Open in IMG/M
Ga0247551_104928	Not Available	545	Open in IMG/M
Ga0247551_104985	Not Available	543	Open in IMG/M
Ga0247551_105065	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	541	Open in IMG/M
Ga0247551_105100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
Ga0247551_105145	Not Available	539	Open in IMG/M
Ga0247551_105149	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
Ga0247551_105171	Not Available	538	Open in IMG/M
Ga0247551_105242	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
Ga0247551_105262	Not Available	535	Open in IMG/M
Ga0247551_105286	Not Available	534	Open in IMG/M
Ga0247551_105489	Not Available	529	Open in IMG/M
Ga0247551_105649	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	524	Open in IMG/M
Ga0247551_105799	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
Ga0247551_105822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
Ga0247551_105889	Not Available	517	Open in IMG/M
Ga0247551_105921	Not Available	517	Open in IMG/M
Ga0247551_106111	Not Available	511	Open in IMG/M
Ga0247551_106150	Not Available	509	Open in IMG/M
Ga0247551_106163	Not Available	509	Open in IMG/M
Ga0247551_106300	Not Available	505	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0247551_100071	Ga0247551_1000711	F030619	LERNTYKRLTLLVKSLPTEQSGTPSRKGARAHRHRGGDMSPLQQVWTTCWSGLVLSGWDSLCHNVRGSALHSKRWKNVPCNIRKNVVDTLCHLAVRQPENGFAFTRLSRSLPEPPQRECVRHLQAAKLMASAEFPTSVAALDSLRSFVALTPGVSGNGVLRHPRRLPSSSSSCLEWPATRGGIDGYLEHLGHMCEEAGATQSSFHAYAGDSLGAFCLRKASVVLRPCAGVAADLRESYRCAGLLYLRSQGKPFGMKATALRTPGYKVRVVGVPDCLTFVEGSWVRSSLRWLAPGHWRIDGESRKIPGGLHYRAGRRFASLDLSKATDGLSHPAVRVVIEGLALRGLIRLADLAMSMRSLGLERGATWSFPDLGDKIGEGSFLRGSPMGTPLSFVVLSWVNAWATSTFSRALTHGDDAVGRYTPGSLELDLYASRVASVGAALNREKTFKADHAWTACEIFALPRSHGEDKMTLFYPPSIPPPALRAPVEADQRLENLWLRRMERVMKSRFPWIVKDPRLHLPVQVGGLGYTGRGLAVGVSVRRRLGALVSRGPSAVIAADLIGKKPFREVGLYPRPLCRVVRPGSYWKAVRATEQWFQAGGDTHVPLESLLSFKSCLIEDEVRLLEGDKFKRKRVAGRPDRTRAGAVFRRLGVAPCRPLTRRWGCSALIRWASLSRESEVTVPEDIASEIRERIPDPT
Ga0247551_100420	Ga0247551_1004201	F022206	QLQAEQAREQDLLLTAVSLARRADLLAKDLLERLP
Ga0247551_100517	Ga0247551_1005171	F060530	FSGWCGVRDSSVVTLFMKMSREGEQGSIAKRWSRRTGSPVKGRIEFRGVA
Ga0247551_100550	Ga0247551_1005501	F030305	MPLQFIGSCIVPFGFLVPVPSFLFPALSDLARRCSSGRPVPRVSDRTGDEASSCPDSSVFSAVPADGSSSRPDSRILQLGYPQIARLPRLSTSCLAVDERPGCPDRSIIWLYRRRRFRVAPNLTSFGGTVSNSPSRPGSSLLQPLPLMVLRVAPGAPSSGFAGGDSSGCPEALIPRLCRLVALRVSPNLPPSDICRFRSSGLPQIGFLGGSMMNPRFARTLHPRSIQLTSLQVAPKLPLPAAPRMNLQTHSGLAFLPTLRCSLNLYPLFACRRTGLLRTTINQFRIACRAGLQSAQYSRCCVLQLPQWPLSSFRWCLVPLAAPAHSFRLASVACTPARPVANLPARIGFVSFGS
Ga0247551_100564	Ga0247551_1005641	F080954	SELERTFPATQEDEGPKEVGDSPRGASCGMQDSREIGRPIPGRAGDAKFGSSRSFVAD
Ga0247551_100586	Ga0247551_1005863	F070391	MTEAALWAGREVEVRACCGRLRWALLDAVGSLPVGARVAALRWGPAEIPVDVEVGADEARAVDAILAAAQRQLGAGASCYAGRGALLIGAG
Ga0247551_100668	Ga0247551_1006682	F007311	SWRYIVRTSGLSVPSCWPPHFAVAPVTDYSMLDALRSPLRSDCSALRFLRPVPASDLTRRPTLSTPRLVQIAPHSTLCARAVHGSPRATDCSVVQHLELCPACGSLRPRWLTFHDALGLLLAHRFPPYGVPGLLRDRRVTLHAGLRIAPYSDALRPWPVHGFLRARS
Ga0247551_100676	Ga0247551_1006762	F022206	GVFAGRVAVLRRAEQAREQDLVTAVSLAKRADLLAKDLIERLP
Ga0247551_100863	Ga0247551_1008632	F005244	IFDENYRVISVEADRLLVRGVHTGEILTIVSPEPEIPLSGDEYPIGKLIALTNPADADTLPN
Ga0247551_100995	Ga0247551_1009951	F068527	YSFLFENARDRSLWRLNLDDQVVQPAVASLGYPSGEPAAFAAAPSSGCADALLSACAYSPAPRLDRRPTSPARIGVFSPGSTGGKHPAFTVCYALPADWLPTSQLALVSSLQLGLRLLPTHIWRRPSARLARTTSGFRRLLLQLPACAFCRCNLQACARLLPPFAKPVVILRLASAVSPSGFTGFDSPGLRLALHTSGWAFDTPLTSTEPCIAG
Ga0247551_101156	Ga0247551_1011561	F025284	QLPSYGITRDVRLRFQATAAALTNITFQNLLDTVLVATSATTAADLFEAVRVNSVELWAIAALGTPATVILAFDGMTVGAAGDQKTHTDTSMGVEPAHVRAQPDKLTQAGQFQTSSANVAFILDVPAGTVIDVSMTLRQPVFGTVVASQNVLVGATAGAVVYRGLDGKTTALTNFPVLGAASVA
Ga0247551_101164	Ga0247551_1011641	F011395	MAAWKRAVFSGERKAVARCRFQLGWTQATSKALIRSSQKGRRGAEELPPVIWLQSSEPCMPASGQAELRIT
Ga0247551_101190	Ga0247551_1011902	F105999	MNCNEIRERMPDVAAGFSEASPDDGKHLETCAACAEALKGMKATMAVL
Ga0247551_101214	Ga0247551_1012142	F006591	RHTLFPMRRSLGAPPSQVGGRLLDASSRGNAELSVSWQDRRPDCSKRLLGEAFQHDSQVPCRGTVPYKVMRLLRRNLVTAVLEVGPRELPPERWPKGTGLASYPSIDI
Ga0247551_101353	Ga0247551_1013531	F006591	IRRSLGAPPLQVGGRLLDASPRGNAEFSVSWQDRRPDCSKRLLGEAFQRGSHGPCRGSVPHKVMRPLRHGLVTAVRQVGPRELPPERWPDGTGLASYPSSDI
Ga0247551_101361	Ga0247551_1013612	F036818	DMKNILLSSVAGVGLLVFSLGAVAQDRDQDAYHSDRDAYFHDQHWRGHLFERVREDVQHVQAATWPGGGDQYRLGSTIDQLNVLQDKLANHVYDERDLDAVIGTLSRVVTDNRMAPRDRDILTDDLSRLRDYRANHADWDR
Ga0247551_101403	Ga0247551_1014031	F038944	MRSRPSHAAKSCVGEHTARESESAQRYAPGKSVWRAP
Ga0247551_101417	Ga0247551_1014171	F067447	SRVAGPNPPHFAPRRNYFLLDTYTKRYTRIAPWLTLSACAGRRLLRAQHFSALPRSRIAPRSTLGFQRQARIAPYPALPALMLHPDCSVFSTCRSVPCTDCSALVPSRSAPATNYFVLDTWPFRPAPGCLRALDVLPCAVYRSLGVQHLALAPVTNYFVLDTWPSVQRPDASVLSTSRPALPADCSALTALRCASYGLLHAWHLALAPVKDYSSLDT
Ga0247551_101471	Ga0247551_1014711	F004178	MRSKTSHAAKSGVGEHTARESESAQRVRRERVRGEHP
Ga0247551_101486	Ga0247551_1014862	F074242	VLGGGGRRSSLQPPAFIPTLSLSHKFRYENGGNSGTFNITRGNLLNQILIANSTTTTVRIIEAIRLKSVEVWGSPPALGSAPTDIQVEWLGENSPSTVISDTSMGIRPSHVATSPPPSSSNKWWSISGTSESDVLFSITLPTESVIDVNCELRLVEKETPTAGDAAVAATLGQVYGDYLDGIASGKLVPSGFTVLP
Ga0247551_101499	Ga0247551_1014991	F067292	ESVVQPLLRPSAPPAAGPQLALATASTGCAGFEPPTCVGCPTSGSTGGQPSDSDRCSVIRLDRWQAPGFHRLLCASVRPGADLPACAGVHPPARPATNCRLTPGADSSARLVPNFRLSPVVVAAFGLRLLLLRLLQLALGVARLPHRRRTSDSHRLLRRPASPVSTHSTCVGCFYFRLGLRCTPCFDWTLHRRTSRR
Ga0247551_101511	Ga0247551_1015112	F030865	MDAEAVACHIKQRFPNLPIILLSAYSDMPERILWLVDEYVMKSELSERLLPIIQQVAERSTRSGRIKPHSSERYEHGSAVA
Ga0247551_101514	Ga0247551_1015141	F009606	NESGRGPNVVRTKAKPKVNPVTGANFDYVSESRIGDSFVVVMAGPSGVQSFTFHHPIGVTDVDAEDWVCTPTGDIPSLLARRDDPDEADRKAKRDKHRLNLVVHAGLLEKPGGDGLLTYPGTDVNRQDALAKARAEAKDAVKAEKGKPSPDLYIRFLPKEVQEAESAVRNLLADEQTIRAAETKFPSSGYRTRSGPLADRDQEEVEYLSGLSRPQAQDAVVKRIFGQDTDDDN
Ga0247551_101519	Ga0247551_1015191	F003427	MAKTRIRSHKRVFTWFASRRPQSPAEASLEASLEIQRPQGAGRPCYEAETTPLAVENGVGKLAANARQMPAWERESGEL
Ga0247551_101565	Ga0247551_1015651	F010305	LKRAEKPHSKFSDRKALDGPATRPKTPLDVENGVGKPAAPEKGAPNAGSGKRD
Ga0247551_101590	Ga0247551_1015901	F069404	SGEERVSCARGPSRGTDAGNERPIRPAGHVAAHPGHDIDPGPVHAGRPRLLAGLLGPLPLLPRHGRLRRNAVSPHGVRLSGASGAPLWIGCSSANRALAGELLWDGIVAVPKVFDTGCPVAFSAEEHGQPAGSVRSGDAGERYSRPGAPRLISLACGHIATHGGTQGVAGIVDIRRLTEQRESTLAPRGAAVPGRRA
Ga0247551_101795	Ga0247551_1017952	F024050	GRSSCPERRMPLALPVSASFRVTPENLAFSYPACDEGLGSPLVLHLRLYRRWTIESPRCSHHSAVPTYQSPGFPKSQPFGIADDSLSESPRTLNPPAPIDGYPSYLGSRTIRFALVRSPSCPGHLPSATAIDQFPGCPKSWVSHRSPIPRASSCPESWFLG
Ga0247551_101841	Ga0247551_1018412	F015340	VSLPGSPAGVRKRQPKRAQRPHSKFSDRKALDGPAMRPATPLAVENGVGKLAA
Ga0247551_101894	Ga0247551_1018941	F006559	ISQAGQPEGQPNLKKPTALRGAVGVWDCESSDRTQVTGEKGKGF
Ga0247551_101955	Ga0247551_1019551	F047359	KIPYGGFSPVRLQGWRISGRLPAKGAHVSRPLGLLPAFVPTAASVTFSAQCRSTLCAQAPPFKRLRRSTPGALAPVRVMLSRSIYTYPAPSDPLAGTARFHCSAAYTPCLRCALPPRRPTTGSVLSLRILSQHVALCDSGESGGCVHPVPSPPTLAFVPLVQTRHSHPSRKSVSRGGHLSELHYGSLALQPADLFTLLTDRTGFTPSPRGFLLPGFRRVGHPPRRRLLLRWQLGNFHRRDLHP
Ga0247551_101956	Ga0247551_1019561	F023797	MPGKPLMLSPFSIRRFGAARVDTIPLLDRTSHRPAVRRMRLPMSLESSLPQLAPQAIFRLRSNLSSSCVAGNVDFQ
Ga0247551_101965	Ga0247551_1019652	F060406	LGELNSTTGCRVLRLPQRPTSRFRLRSRPLAALAPNLRLASPASHSSSTGGRLRRLGSTFCRSARTVANLRLSPALRASVRPLADLPTFVGVLPQARPRTNFRFAPDFDPSTRLVSNFRFAPVVVATSACAFCCCGLWLAPVPPVCQTGGEPPTRIGCPSSGFTGFDSLGLRLVLLPPAGFLMHP
Ga0247551_101991	Ga0247551_1019911	F000218	DSVLSLGGLLVPICAILVGGAIAITGMVHRHNERLAKIERGIDPDASPRA
Ga0247551_102178	Ga0247551_1021781	F010621	LTWFAGRWRNHQPKRAEKPHSIIRNRKNPDGPATRPITPLAVENGVGK
Ga0247551_102180	Ga0247551_1021801	F058585	VSFGSTGCKPPTCVECSALPLVLRRSIWLAPDDPGFIGLAPDNPGSTRLAPHGPFLRLGRQPTSDSHRCRPLTRLAASSGLRLVLPLPLGWLRFQFAPAASPSVLTGREPLGLRLAAPTPAEPLMHSLFQLNLASAAKPSMSILYPPALASSGIFQLNNFRLASAFALLVRPAIPLR
Ga0247551_102195	Ga0247551_1021951	F019067	TDSSIWNPLDYLFEEEVADTLDLNEIFQLGRRTASIAIEQGVPLLGRGTKVLGREVGDDRVDLSRTPDALCATLVVQEDVIKMVTSPEDTSVRMKSWNFCEVTSGPLTDPSQGFDHVRKNGDFSNLGFNDSVILRIILDVQKGEGEEHSSTPPGKMSMLGSRLATPRRENRGMWMIASVFQDSMLCTHKATEPKYLPSVMGGTGVTALFDNSNNVFLYTLAYRGGTYRRIYATA
Ga0247551_102481	Ga0247551_1024811	F002988	VRIQDKIARIDQRKLSGETWKEIDQSTLPIPEQWFSSPIRTSPLKVALLAFERENPGNMTLRVALKS
Ga0247551_102533	Ga0247551_1025331	F073807	VSNKFGQYMILAVGALGLAALPAAADTPCATAALSSYLVSGFTCSVGDLDFSAFSFNTGGTDPLTAGGVGVTPVTSPDGPGLDFDPSGFVSGDAKSQDVMVGFTVTAAPGVFIDDIYMGFGNVTTSGTGTALYTENFCGGPEDACSLFVEAPVTSDTNAVNLSSTDLGGPVSSLTITKDLTLQSGTDGLAATSSFLNEYSTVPEPRAVSLVL
Ga0247551_102591	Ga0247551_1025911	F062337	STAGQPSGSDRRCLAWLGQWQVPGFRLELRASDRLAADLPTCVGVRHPARPAITPDSHLALSFSSARVQLPVRTSCCCNLGLRLLLLRPLTCASFRPSAIPAVNFRLASACSTHRLHRFRPTRLAPCASTSGWAFDAPLTSTEPCIAGKPSMSIPYPPVRASSGSASLTTFDLRRLLQLLAQPAIPLWLSPQVSPSGWAGGDFPILIGFSFHQPFRQPTPD
Ga0247551_102601	Ga0247551_1026011	F004178	MRSISSHAAESGVGEHTARESECAQCVRRERVCGEYPPPNL
Ga0247551_102840	Ga0247551_1028401	F001380	GFTVRFSDPSACGRSLCNKMLRKNSSSLSAAAFQPATGHSNQRILIGLSTLPEPESRYGLSLAHNDAFATIARSMFLACTFVSTSKTFANPFDSQLFRSVRFRGRTGATSMPGTRFPLLSSTLRILSRSPLPFRPSFENPLDQSVRPVPNPKARLTRRPIVPYSPLLLLAIPLRISARNSLRLSLTYRSARIWRRSGGHSREYARMWRLLFYLA
Ga0247551_102922	Ga0247551_1029221	F022483	DYDSYGLERRLDSDRAPDAAGYWFLAAVLFAFLAAGIIVYRAGNTETQTAANYSSHPAAQSDPVASPPIVPR
Ga0247551_103091	Ga0247551_1030911	F028056	PGFTARLSEPPACSAFDPQPNTPDSTFAARRRRFSARAGSVQQTFPQRTCIRPEPETRNGLSLARNDAFATITRSTFLACPFDSTYKLCADPFHRKLSARFGFEAETGRIHHLRPVIHAPLMRSHDATPSPLPFGLFLPSGSKRSTGFITGSSPYRTPDLPFTPRCAFFRLRFGSVLKTPLRPVWLSFLRSLLSQSQTPTTPRRAVGFF
Ga0247551_103322	Ga0247551_1033221	F001024	MRPVTPLAVENGVGKLAANGRQMPARERECGELPSP
Ga0247551_103365	Ga0247551_1033651	F025750	MEKADAHRSIDPWPAKTGGGEQRAHVTPSSDAKFRPCMPVGERADRRVTWNELID
Ga0247551_103730	Ga0247551_1037301	F005215	AATLMLMAPFLIPNHTRAAAQDNDKSTSTDKVAVIAQLPLPGSPVRQILMQEENGKEYLYLQQNVHFTVVDVTDPKNPRIVDRLESHGKLTDVGAGLAISVQSDQSGDSVPTQTVRLVDLKDPKNPRTVKTLTGVTSVYSDNGRKLIFAANNQGLWIIKHYETFRLPYCTSESEANTVAQCQ
Ga0247551_103740	Ga0247551_1037401	F098405	VSPLLPAAGFVPAADHCSGARPRFSVPIEARLSMRPFTLRQRRPTFQSAPAARSTLLAYIFEAISRSASGPFGFALPPPHRLLWPCEARSPPETRCQIRSRNSLPVFRLSLPVGISQSLRIVALSLTPTREACPCRLPDLPSLPAAPEIITYHVSASDHRSGSATSCQACCPSN
Ga0247551_103886	Ga0247551_1038862	F003812	VKFRQILTYLFIAFVIWWVIQQPTNAAHLVHNIGTLLTSAANGLSHFVSSI
Ga0247551_103920	Ga0247551_1039201	F036818	RLLLSSVAGAGLLVFGMTATAQDRDRDPDSYRSERDARFNDQHWRGRLFDNIREDVEHVRSVTWPGGGDSYRLDRTVDQLNQLQSKLADHVYDERDLDDVIGVLSRVVSDNRMAPRDRDILTDDLTRLREYRDHHADWDR
Ga0247551_103931	Ga0247551_1039311	F065302	QGSRYDSATRLHADVRFAARCPGRTTHRSPSPLFSLPWVIAIRSPHHASLSDFSILPEPESRYGLSLAHNDAFATIARSTFLACTFGSLSETLANPFDSWLFRSVRFRGRTGATSMPGTRYPRQSPIFLIFRRSPLPLRSSFENPPDQSVQPVPFQETRLAKRSIAHHSPLLPLSIPHRITA
Ga0247551_103937	Ga0247551_1039371	F009017	SDPISSLAHHGHATVLSIAFQIAVRLACPLHGHRFGGYRFNAFTRAAALYPKLDRSLVTAFPSPATAPAFADSIPGSMVLACYFAVSLAGFHARSVFRLRRRNWFAPIPAASTLQTRCTFAGNLIRLLSPSPLPSRSFSSLGIKAFNGRHRRPVRLPNPPDLRSLPAAISIARWRLRIIVHGSLRFRRLAVPQT
Ga0247551_103947	Ga0247551_1039471	F092084	VSSCYHSDIKDKMSRPLKVKTVIVPKGQNEYGRDVVRFTADYAASDLFEQCIGCYPLVQHDLNDSFLEKESPSPPLMIDPDVMTDEEVERWMAKYVRGNTNAFVQNAGQNVPGGRN
Ga0247551_104096	Ga0247551_1040961	F020134	MTPARGAGDIALPAVARLKGRAAPAATFLSPVARDYPNRALGGVFRPPRCD
Ga0247551_104104	Ga0247551_1041042	F064310	NYVTHVEADESTSDPRAAGRTGASSHEYTERACHDGE
Ga0247551_104107	Ga0247551_1041072	F025098	MVATSKIILPYEPGYVANKEADKRRKETKERLRQREREFAERQQPPSIVPERLRACSVGGFVTVEVSKSAHTAQASA
Ga0247551_104261	Ga0247551_1042612	F044295	RTGCGERAEIGRIRKADRTAATPIERFDPEGAKIPGGEWRWRERPDEFAGENATGLRRGSGGNWGKPVPAAEPKDRTGKATGDRDSEVAGQDL
Ga0247551_104330	Ga0247551_1043301	F012875	PGFTARLSEPPACSALDPQPDTPDSTFAARRRRFSARAGSVQQTLPQRICIRPEPETRNGLSLARNDAFATITRSTFLACPFESTYKLCADPFDRRLSTRFGFEAATGRIHHPRPVIHALLTRSHDATPSPLPFGRFCPPDQSVQRASSQEARLTGHPICLSLPATLSFDRAADQCSKLRFVPLGYRS
Ga0247551_104364	Ga0247551_1043641	F028342	MKLRWLASAIALAAFSVGPWTFAQVSDQDKDQPKSGDVQNAPAQAPASLPTADDSQIKHDGGATDVDAVGNRNVGCGRGVGNWYTVEHQVADGRKFSTRLVQRPGPKRSHSAASQDEK
Ga0247551_104450	Ga0247551_1044501	F003384	MKAETMNPITQDRLATGEEIRRATSSTQDRMLELCHSQGNYCQMDSDIGGIIRYPAEEFEFF
Ga0247551_104462	Ga0247551_1044621	F062326	RVHGTIERTTGMLGVRSATGRSGFVVFRSPATPFGTRRVSAKNASSRLASRRSRKLGTAFRSPVTMLSPPLRGQRSRPAPSLPRRCFFAYPLDQKLLRSVRFRSRNRANSSPSTRCPRRSPALLRCHPVSTPLRAFPPSGSKRSTGFIATSSPRLTPDMSFAPRGAIFRFRPGSTLETRFVLLGYR
Ga0247551_104485	Ga0247551_1044852	F086433	NSRRKVVWTEPGLPSFVKINPGSPPGSAEGLQPGDITMTTVAQQFLEADEPDTPLSTTVM
Ga0247551_104512	Ga0247551_1045121	F062493	VCRKASIPGQRNRPRGSGTARHPELLNAMFYAEHAGREQG
Ga0247551_104544	Ga0247551_1045441	F001380	PGLTVRFSDPSACGRSLCGKMLRINSSSLSAAAFQPATGHSNQQILIGYSILPELESRYGLSLAHNDAFATIARSTFLACTFVSISKTFANPFDCVLFRSARFRGRCGAMSTPATRFPRQFPTFLTRPQSPLPFGSSCENPPDQSVRPVQNPEARLTRRSIVSCSPPLPLSIPPRINARNSLPSK
Ga0247551_104564	Ga0247551_1045641	F089654	RVRGTIQRPVCMRTFALRPDGSDDRQSLAIATFQPATGHSDQRALNELNILPEPETRYGLSLAHNDAYATIARSMFLACTFVSLSKTCANPFDTGLFRSVRFRGRSGAMSLPDTRFPRRSPTLPIYPRSPLPFRSSMKTLRIEVFNRFPMREARLARHPIAVSSPPLPLSIPLRISASNSLRPAR
Ga0247551_104565	Ga0247551_1045652	F000968	GIVDGRSECCRYEPSLEDLLADEVMEPVLRSAGLEPQEFRQMMMETARRIEDRERRSEAEAG
Ga0247551_104597	Ga0247551_1045971	F084660	GLEGFPSSGSSTQKRPPEKRGRGLSQNEAGLLDSDLLPIRTAVENLPAMCEAAPTGCPVVICFASFVGSSRVLELSTNGKSAPFPAR
Ga0247551_104612	Ga0247551_1046121	F018722	MLPAIAVARTEGRTAPAAVALSPVARDYPSRALEGFFR
Ga0247551_104641	Ga0247551_1046411	F050385	MHGQNMASENGVTLALCSSPPVLAGCGSMLGCASAFPVPVEAHSSMRSFTLRQRWLILRPVSTAGSTLPTCIFEVIPKSSPGPFGSALPPPLWLFVALRGTFDVRNPLPSSISEFPGCPQVAAPLRDLSIPPDRSAQPDFNQRGLPLRVARFSFAPRCARNNHLSPAQRINVPD
Ga0247551_104738	Ga0247551_1047382	F029165	VGSYFDGSQSGPFGGDPRMSGRVPGSAGSSPSGFMGLQTSSFADFLASHSPDLLPGRTVPGDAIQGTP
Ga0247551_104875	Ga0247551_1048751	F060530	MGLTLIQFSGWCGVRDSSTFTLITKVTREGKQGSIAKRWSRRTRRNVEG
Ga0247551_104928	Ga0247551_1049282	F069578	KSFLATSAMLLSLAAIGSAKSWEIIVDSNTKAGGVSLPAGNYTVKLDNNQALFTSDSGKKFTVPVKIDNGSAKKFSQTEVKTLKEGDTNVIHEIDLSGTTEELQFSE
Ga0247551_104985	Ga0247551_1049851	F023505	LDVGGGRKKAASFPEIIPGDWAKVESGWLAQPLEDRFARSGNRRHNSPVPLSAFARRQ
Ga0247551_105065	Ga0247551_1050651	F020134	LRAVPRSKGRAAPAAAYLSPVTRDYPSRALGVFFSPP
Ga0247551_105100	Ga0247551_1051001	F003336	MSVNATAAYGMYPRTVALPEVVHALNRAGFENQDICMVLSPAHPVATVVRDAKIVDSDRAESATSARMIGWFSEFGAVVIPTVGFFIRSQAFFHALVTEQNFPSMSRGSRTLMGLGFCEDEAKRLGHQLCDVGAMVYVSCREKGKTNSAIELLRREGAREA
Ga0247551_105145	Ga0247551_1051451	F030627	AVSDRFCGDLLPARARLGPLSVRHFLRIASGRRFCCGSFRRSNHPTGWHGGFPAGRPWDFAAERRKIAPTDKGWRSLPALPFPGPAPRIGLASSAVTGSIDLPWVQCTGVEGLSPRDPDASLAATLTPIAHPAFWRRLVRGGLVAGRRLPPCPRLFASHG
Ga0247551_105149	Ga0247551_1051492	F036354	EVIAKRKGVIARWGLKEAWSKDASRWTRTGYEAYGAGRAGK
Ga0247551_105171	Ga0247551_1051711	F031388	GDPQPNTSNRNGGGEREEIGRIRKVSRKAAESVERFDPEGCKSPGGEWRQRKQLRVPARRAATGLKRRSCPQLGQTSEGRGVEGGPGSEPSWEVAKWQVRTVDPGMEASEKEQPLRARERPLRATGSVEKRDAVWPEGTDPGAEKSSLGERNGEAPRTS
Ga0247551_105242	Ga0247551_1052421	F019691	MTGLLHEKEFSRKTFVRGGGSLIVGFSLLGTGFAGAASAAPS
Ga0247551_105262	Ga0247551_1052621	F040634	TEHRISDCRAYSPQAPRLLAYPASASSPLDAPQLIFPKRDRSLAAAFPSSRTPSACADSTLRSMVLACYFAHSLAVRPARSAFWLPRHGLVSPSFRRHPRLKPVAFCTGPLCQLCHQVPLPFRSFRSLRIKALHGLATVRSAFRNCPIFVRSPQPFLLKFGCGS
Ga0247551_105286	Ga0247551_1052861	F021919	TAQSLAARIAGCFPFRSPQPFLEGYRSMLPGSPASFPSWNWHLEAAFHSPETTARFRATISRSKLPTCYFDTLPFVRPARSDFDSLTRSGSPRYAPDRYRNPVARLALSTSSPSSNLHSPLGPFGPFRIKAFDPIPGRKVRFPSAPDCLLLPSFNSILLASMPDHRSRLAKRSVACCS
Ga0247551_105346	Ga0247551_1053462	F000218	MIDCLRLAEALVSRFMDSVMALGGLLVPIVALIVGGAVAITQLILRHQERLAKIERGIDPDASGPQQR
Ga0247551_105489	Ga0247551_1054891	F026569	MHGTEHRISERRALSPLAPRQPVSPATASSPSGTPQLFSKTGPFARNGLSLARNGLRLRGSHSRVNGPGLLLRSFACRSSCPFGFLAPPPDAGSPQFLVASSPQARCIPYRPTLPTVPPASAPRRECSLPPDQSLNWLRNRSVRLPESPDLRSLPAAFPFKVR
Ga0247551_105649	Ga0247551_1056492	F095180	GVKFRVQEHVLLRVDFLDYITTFPRRQIMPAPHNTARGMFQQFTPLFGISYTF
Ga0247551_105799	Ga0247551_1057991	F074807	IDKNDIKRGIDDVAAHLKDAVDRIAEKTGEAREKTHEKARELGRKTGDQMIETGQKLKAASSEPVSE
Ga0247551_105822	Ga0247551_1058221	F000968	NIMDERLDCCRYRPSLDDLIADAVMEPVLRSAGLDQHGLREMMVETARRIEDRDRQNDGAADPADE
Ga0247551_105889	Ga0247551_1058891	F007725	MRFRTVLTLATLFMACFTLAVFAQPLPAKDAGLGAGRAPENQSVSGQIASVGDAVFTISTKKDNQKAQSVEFLVDDKTKVEGKLTIGAQALVEYRSDSGKNVAVHVVVTPGSGVSPY
Ga0247551_105921	Ga0247551_1059211	F011567	LRLVPVTGSTLLAYIFEAILKPTPQPVRFQTPVPVRPFYCLARYDPRLKPVARAKLPDFLPVFESPLPSRTFLSFGIKALNSTPFRDACLDESPDLPSLPVSRK
Ga0247551_106111	Ga0247551_1061111	F001380	DPSACGRSLCNKMLRINSSSLSATAFQHATGHSNQHIFVGLSTLPEPESRYGLSLAHNDAFATIARSMFLACTFVSTSKTFANPFDSRLFRSVRFRGRTGAMSTPGTRFPLPPSTLRILPRSPLPFRPSFENPLDQSVRPVPNPEARLTRRPIVPCSPLLPLSIPLRISA
Ga0247551_106150	Ga0247551_1061502	F023657	MATSGNLPSRAWSWRESYVAALMEPENHKMSARIADAEGAILERARELFKASGDNIQEEEALDDALYALRALKTCLEVHGGFATAA
Ga0247551_106163	Ga0247551_1061631	F005356	MSANAMTMQDLELESAELLPARETLCCSYSHSGGSSFAQVGYGNTAQAGLVNISAGNGDLNNVLSFGSGNIG
Ga0247551_106300	Ga0247551_1063001	F060503	GFTSTTLAHRRHARPEPRQSGRWDNICSAPRTQLSSQVRISALQPICAPFPIGTDISKRPFARSERQPASRPPFRGQCSRPTGSISTGPSPNPIQSDVPDRLSGLRSSSGVFMPLRILAFNRSSAPEAHLLKLPDVPSLPAAITHKCVGRGSTFQVRYFSPSPLLP
Ga0247551_106322	Ga0247551_1063223	F000218	VRLIDAITSLGGLLVPIVAIIVGGAIAITTMILRHQERIAKIERGIDPDGPRT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300023552: Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences