NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300010410

3300010410: Aquatic microbial communities from North Sea petroleum storage tank - Cell4b



Overview

Basic Information
IMG/M Taxon OID3300010410 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0111382 | Gp0155436 | Ga0136992
Sample NameAquatic microbial communities from North Sea petroleum storage tank - Cell4b
Sequencing StatusPermanent Draft
Sequencing CenterShell Corporation
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size496831771
Sequencing Scaffolds13
Novel Protein Genes15
Associated Families15

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae1
Not Available5
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin0092
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium CG07_land_8_20_14_0_80_40_91
All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula → Desulfobacula toluolica → Desulfobacula toluolica Tol21

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameSubsurface Hydrocarbon Microbial Communities From Various Worldwide Shell Locations
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Aquatic → Subsurface Hydrocarbon Microbial Communities From Various Worldwide Shell Locations

Alternative Ecosystem Assignments
Environment Ontology (ENVO)aquatic biome → oil tank → oil
Earth Microbiome Project Ontology (EMPO)Free-living → Saline → Water (saline)

Location Information
LocationNorth Sea
CoordinatesLat. (o)60.9Long. (o)1.8Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F025288Metagenome / Metatranscriptome202N
F026446Metagenome / Metatranscriptome198Y
F029294Metagenome189Y
F031475Metagenome / Metatranscriptome182N
F036294Metagenome / Metatranscriptome170Y
F037711Metagenome / Metatranscriptome167Y
F044014Metagenome155Y
F051532Metagenome / Metatranscriptome144Y
F055749Metagenome / Metatranscriptome138N
F072352Metagenome / Metatranscriptome121Y
F086646Metagenome / Metatranscriptome110Y
F091299Metagenome107Y
F095523Metagenome / Metatranscriptome105N
F099327Metagenome103Y
F103315Metagenome / Metatranscriptome101N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0136992_10000089All Organisms → cellular organisms → Bacteria33340Open in IMG/M
Ga0136992_10000124All Organisms → cellular organisms → Bacteria27444Open in IMG/M
Ga0136992_10000996All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae8563Open in IMG/M
Ga0136992_10002625Not Available4488Open in IMG/M
Ga0136992_10005006All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin0092885Open in IMG/M
Ga0136992_10005334All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin0092762Open in IMG/M
Ga0136992_10008305Not Available2052Open in IMG/M
Ga0136992_10016371All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium CG07_land_8_20_14_0_80_40_91339Open in IMG/M
Ga0136992_10040719Not Available779Open in IMG/M
Ga0136992_10043036Not Available754Open in IMG/M
Ga0136992_10045427Not Available731Open in IMG/M
Ga0136992_10050123All Organisms → cellular organisms → Archaea → DPANN group → Nanoarchaeota → unclassified Nanoarchaeota → Nanoarchaeota archaeon690Open in IMG/M
Ga0136992_10060793All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula → Desulfobacula toluolica → Desulfobacula toluolica Tol2614Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0136992_10000089Ga0136992_1000008926F031475MGANTSDSSQDSLNANPQKQREKLTQLDFLTLEMMGISLEELRALLDEEELQAYFAFLRRQSSDLDSTSP*
Ga0136992_10000089Ga0136992_1000008927F025288MKNIWIWITLTVIVIFGLIAGAGLLGYQVGLRSANALAPQIDEDRALPRQLMPWLRTAPDGGIIRRPTGFIGYFFLFPLGLLLRLAILVLVVWLVVKVAKAAWNSGNHKPQPAEAVITQTPEKTPEATVSAAPPEEAAPPSEATQGGEK*
Ga0136992_10000124Ga0136992_100001248F086646MDFIFSIKNHYFEKGTPWVELDKIKQRSWFLSVDIEDDEAVPCYDTEHELRISQGIAFKSVKILTGKTQETHPYWEALLDMSYAYSTELRDITLKDLPAESGIYSLSIWFDEDGINFGTFKKLCEYRHKWDDGWVCSRCGVRRADWVEADIKGSHYEN*
Ga0136992_10000996Ga0136992_1000099613F037711PACKRTTLSQQIDAKKRMGFGAGRGQGEGRLKYLTLKKLVVID*
Ga0136992_10002625Ga0136992_100026253F091299MSEKDKLENIAGSGMPVTIKGKEYMLGIFDMRDLADFRQYIKGQRIKVIQETISDSAERIELINKIIEGNVDEMKELRTTDGVCFMLWKSLQKYQPEITLKDADELIDLDNVNEITNIIMKIGGQVKNPPERAKKK*
Ga0136992_10005006Ga0136992_100050061F055749MNLIIAIAIGILTLIAVFSVIPVVGGSIDNAMPELDENSSWADPDLPSGASMWSQLGPLLVLAVLALVIGLVIMYFRNAAG*
Ga0136992_10005006Ga0136992_100050063F103315MITVEIYIFLAAVVAAAFIYIFLDLDNRLYGNLFAAAFAGILSGLLALWSFNENTVTITTVPQTAIAVQHYLNDTLANVTTTYAYQTHIVPIVDPALGYFWMLVMVFMWFLVGYFVLEIMHESRMPDDEEAYE*
Ga0136992_10005334Ga0136992_100053342F095523MGVSIPIEYLYLTVGLLVVAVIYIINDKNNARLYNPEGPLFVKARKKEIPILRVIDPGTNHARHVLGDKERDDDPVYAKDMWGLHADPAYIEGDASPERHPGGLLIYNISPNVTFPISPRNVLAQQTILRHRRDLPEFADLDFLSDRDLLVLLSSPSDHLPHDAQIFTDNYKPTIVEIDESGQPVEVEMNATDLVDRITAFKKYATTLPVEGGGFAYHEYFRNNPYGHSSQTTQRINYLFQKIADRKSAMADKLWTYGLIAMGLLGAVGVTIYIISIAAG*
Ga0136992_10008305Ga0136992_100083051F072352MNPPKTAFSDVKRAPTIYTLPECPNGCGEMLAQDDGWQS
Ga0136992_10016371Ga0136992_100163711F026446MKVAGEIFSFVLKRIRSRRGKILNVSKLSGKRTVTGQNFGELYTKKHRRGNS*
Ga0136992_10040719Ga0136992_100407191F099327MAQEGYIQGTSGEEISVLVDGIKLMALQILSWKASQSKSLIRGAGYRKAHGIGRGPKEYELDFEVKELNQAVIAEGVNSPRSSEEKIKTFSVGGQEFEDLLDLRNATILIMYPPKNNAQRVIRFTGFEFTDVEGGFAFDDESVGRKLSGIAMDAEGLV*
Ga0136992_10043036Ga0136992_100430361F029294LRRIDMVQETGETRDAIIEDDNKRIQKIINANKSLTDLYWIVVFAKPSKFELEGKPTLIKHIKAYKTKPPPQVGMIVGEVANSNGTVNWDVNMPQRPFDFDALQIYGAKPCNEVITETTSIPGAYITK*
Ga0136992_10045427Ga0136992_100454271F044014MNDEYKPRFSFEITDEQKERADRLITTYGLRKAMFGQVLDDILDLIDEYGGVVIGIIASSKLKPREIIPSLKKAEEVGKHGNKR*
Ga0136992_10050123Ga0136992_100501232F051532MKILTCYSARFYGRRGGRKKKNTTENESNESNGI*
Ga0136992_10060793Ga0136992_100607931F036294AIVGVKPAADEDAVTYPRIKLLESDKDVGAEGWNM*
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