| Basic Information | |
|---|---|
| Taxon OID | 3300029314 Open in IMG/M |
| Scaffold ID | Ga0239302_102018 Open in IMG/M |
| Source Dataset Name | Activated sludge microbial communities from Sewage Treatment Plant in Aalborg, Denmark - MBR_Gel1 |
| Source Dataset Category | Metagenome |
| Source Dataset Use Policy | Open |
| Sequencing Center | Aalborg University |
| Sequencing Status | Permanent Draft |
| Scaffold Components | |
|---|---|
| Scaffold Length (bps) | 9814 |
| Total Scaffold Genes | 15 (view) |
| Total Scaffold Genes with Ribosome Binding Sites (RBS) | 10 (66.67%) |
| Novel Protein Genes | 1 (view) |
| Novel Protein Genes with Ribosome Binding Sites (RBS) | 1 (100.00%) |
| Associated Families | 1 |
| Taxonomy | |
|---|---|
| Not Available | (Source: ) |
| Source Dataset Ecosystem |
|---|
| Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Comammox Microbial Communities From Various Environments And Locations In Europe |
| Source Dataset Sampling Location | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location Name | Denmark: Aalberg | |||||||
| Coordinates | Lat. (o) | 57.049957 | Long. (o) | 9.865377 | Alt. (m) | Depth (m) | Location on Map | |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F085731 | Metagenome | 111 | Y |
| Protein ID | Family | RBS | Sequence |
|---|---|---|---|
| Ga0239302_1020182 | F085731 | GGA | MSQQLFPLLVRVHVMVQMACRNLRVRTRDAWLSRHEEDGVDEAVTKMIWLAVGIVVAIAATSFFTAKFNQARDNVPDPVAP |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |