Sample 3300033491

Basic Information
IMG/M Taxon OID	3300033491 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0136052 \| Gp0348982 \| Ga0326762
Sample Name	Hot spring sediment microbial communities from Norris Geyser Basin, Yellowstone National Park, WY, United States - NOR.PS_S
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Sample Name

Hot spring sediment microbial communities from Norris Geyser Basin, Yellowstone National Park, WY, United States - NOR.PS_S

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	96035301
Sequencing Scaffolds	27
Novel Protein Genes	32
Associated Families	10

Dataset Contents

Total Genome Size

96035301

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Pyrobaculum	2
All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Pyrobaculum → unclassified Pyrobaculum → Pyrobaculum sp.	6
All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae	1
All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Thermoproteus → unclassified Thermoproteus → Thermoproteus sp. CP80	1
All Organisms → Viruses → unclassified archaeal viruses → Nanoarchaeotal virus 1	2
Not Available	15

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Pyrobaculum

All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Pyrobaculum → unclassified Pyrobaculum → Pyrobaculum sp.

All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae

All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Thermoproteus → unclassified Thermoproteus → Thermoproteus sp. CP80

All Organisms → Viruses → unclassified archaeal viruses → Nanoarchaeotal virus 1

Not Available

Ecosystem Assignment (GOLD)
Name	Hot Spring Microbial Communities From Different Geyser Basins In Yellowstone National Park, Wy, United States
Type	Environmental
Taxonomy	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment → Hot Spring Microbial Communities From Different Geyser Basins In Yellowstone National Park, Wy, United States

Ecosystem Assignment (GOLD)

Name

Hot Spring Microbial Communities From Different Geyser Basins In Yellowstone National Park, Wy, United States

Type

Environmental

Taxonomy

Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment → Hot Spring Microbial Communities From Different Geyser Basins In Yellowstone National Park, Wy, United States

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → hot spring → sediment
Earth Microbiome Project Ontology (EMPO)	Unclassified

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

aquatic biome → hot spring → sediment

Earth Microbiome Project Ontology (EMPO)

Unclassified

Location Information
Location	USA: Wyoming
Coordinates	Lat. (^o)	44.7265	Long. (^o)	-110.7091	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

USA: Wyoming

Coordinates

Lat. (^o)

44.7265

Long. (^o)

-110.7091

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F013155	Metagenome / Metatranscriptome	274	Y
F021443	Metagenome / Metatranscriptome	219	Y
F021808	Metagenome / Metatranscriptome	217	Y
F038745	Metagenome / Metatranscriptome	165	Y
F043237	Metagenome / Metatranscriptome	156	Y
F051572	Metagenome / Metatranscriptome	144	N
F075483	Metagenome / Metatranscriptome	119	Y
F080678	Metagenome	115	N
F087443	Metagenome / Metatranscriptome	110	Y
F088087	Metagenome	109	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0326762_1000539	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Pyrobaculum	16737	Open in IMG/M
Ga0326762_1000641	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Pyrobaculum	14931	Open in IMG/M
Ga0326762_1001432	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Pyrobaculum → unclassified Pyrobaculum → Pyrobaculum sp.	7976	Open in IMG/M
Ga0326762_1001908	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Pyrobaculum → unclassified Pyrobaculum → Pyrobaculum sp.	6367	Open in IMG/M
Ga0326762_1002657	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae	4827	Open in IMG/M
Ga0326762_1003732	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Thermoproteus → unclassified Thermoproteus → Thermoproteus sp. CP80	3590	Open in IMG/M
Ga0326762_1004725	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Pyrobaculum → unclassified Pyrobaculum → Pyrobaculum sp.	2903	Open in IMG/M
Ga0326762_1007163	All Organisms → Viruses → unclassified archaeal viruses → Nanoarchaeotal virus 1	1977	Open in IMG/M
Ga0326762_1007874	Not Available	1813	Open in IMG/M
Ga0326762_1008956	Not Available	1602	Open in IMG/M
Ga0326762_1009090	Not Available	1579	Open in IMG/M
Ga0326762_1009356	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Pyrobaculum → unclassified Pyrobaculum → Pyrobaculum sp.	1532	Open in IMG/M
Ga0326762_1009588	Not Available	1496	Open in IMG/M
Ga0326762_1011155	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Pyrobaculum → unclassified Pyrobaculum → Pyrobaculum sp.	1296	Open in IMG/M
Ga0326762_1012385	Not Available	1171	Open in IMG/M
Ga0326762_1013394	Not Available	1086	Open in IMG/M
Ga0326762_1013735	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Pyrobaculum → unclassified Pyrobaculum → Pyrobaculum sp.	1062	Open in IMG/M
Ga0326762_1013803	Not Available	1057	Open in IMG/M
Ga0326762_1015587	Not Available	947	Open in IMG/M
Ga0326762_1015917	Not Available	929	Open in IMG/M
Ga0326762_1017392	Not Available	858	Open in IMG/M
Ga0326762_1021011	Not Available	722	Open in IMG/M
Ga0326762_1021827	Not Available	699	Open in IMG/M
Ga0326762_1022139	Not Available	691	Open in IMG/M
Ga0326762_1027500	Not Available	573	Open in IMG/M
Ga0326762_1030003	Not Available	533	Open in IMG/M
Ga0326762_1031630	All Organisms → Viruses → unclassified archaeal viruses → Nanoarchaeotal virus 1	509	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0326762_1000539	Ga0326762_100053916	F051572	MSRGRAYGGPFAEVWAFADVVLKGGCKKSPQFLDAHLELCVLAALVKAAPAGSMVRLRPEIVRRLVEELAAAAGQDRERIRNALLKKAGETLAQLRRELGDKAPAEALLAKLVELFLKELEA
Ga0326762_1000539	Ga0326762_100053917	F038745	MDKAVVVVCGELMQISLAFSAYYPLCLGGPPCAYAEAVERLIRRAASARGAEELLEAINGRVRLEELGLSAPALEDLAEELGPEPRWLDALAASFFRLYLGLGRRRRVDGRDLALALCLWAQKKRQEDPRNPLWRAAELEPDRLYTEEEAREALKINEALFRRLWRRALAGDKAYGFQLILAALSLMAAPPRSA
Ga0326762_1000641	Ga0326762_100064111	F051572	MSRGRAHGGPFAEVQKIADVVLKGGCKKSVQFLDAHLELCVLAALVKAAPAGSMVRLRPEIVRRLVEELAAAAGRDRERIRNALLKKAGETLAQLRRELGDKAPAEALLAKLAELFLKEL
Ga0326762_1001432	Ga0326762_10014321	F013155	MELYQVVVIAIALANLAVTIWLLRLLIPIWQTLRRIVFALDNFDFDEVSRKFLNNEKPLAESVIVKTSEKKEEGYREISITRVYKKPLDAKDIQEGFVRQMAERLQ
Ga0326762_1001908	Ga0326762_10019083	F075483	MIELLAVQAVTTLALAFFVIKLRRELYPMIATAGPVHAGFWIRSIDVLVLATPQLEAAKTVIKIRRLLEEELFLKYSLKFYDVAMHPTSQHHYRMWKAWMQGDDRYKCEVEKPRGLSRLYNKAVEVFCREKEPPKEVIILPSKVRKRRYKRMLRQLREARRNSAEKPT
Ga0326762_1002657	Ga0326762_10026572	F013155	MELYQVAVIAIALANLAVTVWLLRLLIPIWQTLRKIVFVLDQYDFDKLAKEFLSNEKPLAETIDVKVSEKKEEGYRELTVTRVYRKPLDPREIQENFVRQMAERLQ
Ga0326762_1003732	Ga0326762_10037324	F051572	MTSRTHSGPFAEVRTFADIVLEGGCKKSLQFLNTHFDLCVLTVLIKTAPAGPMVKLRPEMVRRLVEEVAAAVGGGDRERIRNAMLKRAGEMMAQLRRELGDSAPSEAYVAKLAELFLKKLEA
Ga0326762_1004725	Ga0326762_10047251	F038745	MDKAVVVVCGELMQISLAFSAYYPLCSGGPPCAYAEAVERLIRRAASARGAEELVEVMEGRVRLEELGLPDPALEPLAEELGPEPRWLDALAASFFRLYLGVYKRRRVDGRDLAFALCLWAQKKRREDPWNPLWRAAELKPDRLYTEEEAREALKINEALFRRLWRR
Ga0326762_1007163	Ga0326762_10071632	F087443	MVQRKNYWMAFLDSDNVDYIDKEITKIGVDLDLDPSEIRAWIFKAFVYDPEVRAKVIEYIKKNGK
Ga0326762_1007874	Ga0326762_10078741	F021443	YYQINGILSFAVMDLVFKIVNQQKRKSIVLKKRKSIIHLLNYIDTLNFNSNSSKFNIDVRLKNKYKTPLTYNLYLHRSSHRRNYYASFYKDSLNVIERENLCIIKLEDDYANRIQPKNVNLIAVLMHILEQNEINMIDANGMIFYCVFLM
Ga0326762_1007874	Ga0326762_10078742	F021443	MKYLLNSGKLTFRFRPSYVECYNYGYSYYQINGILPFAIIDLVFKIVKQQKRKSIVLKKRKSIIHLLNYIDTLNFNFNSNKLGITFPLKNEYKIPLIYNLYSYRSLYERRYYEDFYKDSLKVIEQENSCIIKLDDDYVGRIQPKNLNLATMLMHILEQKKINMIDANGMIFYCVFLI
Ga0326762_1007874	Ga0326762_10078743	F021443	MKCMLNNKKLTFEFGHPYPPYVTCNNDSYYQINEILSFAVIDLAFKIISQQERKSIVLKKRKSIIHLLNYIDILNFNSNKFEITFPLENKYKALLMYNLFLYRSSHQERYYNDLHKNNLKVIENKNSCIIELKYDYSSRIQPKNVNLTTMLMRILAKKEIDTDLNGIIFYCIFLM
Ga0326762_1008956	Ga0326762_10089561	F043237	MDLEKTAKYIAQLSRHGYKYAVIGELLRYDKELVKRLEYDGFVFYLCRLPSKKEVVSYCLPRTEGPFKVYCLSSKPLEFPNAPLKLHYDEKSQRLRLLAQKSFINDCLNAIEKASEVKYPSPKLYIAQVNKALRQLYSVLAHTYNDKERLSAIKRKVKHWVVEALKNQYGLKPKDAMLDYSRYVL
Ga0326762_1009090	Ga0326762_10090903	F021443	MKCLFNSEKLIFEFACPYPPYVTCYNDNYYQINEILSFAVIDLVFKIINQQKRKSITLKKRKPIIHLLNYIDILNFNFNSNKFEITFPLENEYEMLLIFNLFLYRSSHQERYYNDLHKNNLEVIEHKNSCIIRLKYDGSDIIQPRNLNLATMLMRILKKEEIDVDLNGMIFYCIFLM
Ga0326762_1009356	Ga0326762_10093562	F013155	MELYQVVVISIALANLAVTIWLLRLLIPIWQTLRKVVFALDHYDFDKLAKQFLSNEKPLAENVIVKTSEKKEEGYREISITRVYKKPLDAKEVWEGIVRQMAEKLQ
Ga0326762_1009588	Ga0326762_10095882	F021443	MKCLLNNGKLTFEFRDPYRIDYVTCYNYDYNYYQINGILSFAVMDLAFKIIKQQERKSIILKKGDPIVHLLNYIDTLNFNSNNSKLDITFPLENKYKAQLIFNLYLHRSSYQRRYFKDLYKNNLKVIERENSCIIELDDDYPSRIQPKNVNLIAMLMHILEQKEIDLIDVNGLIFYCVFL
Ga0326762_1009588	Ga0326762_10095883	F021443	MKCLLNDERLTFRFGHSYVTCYNYDNSYYQINEILSFAVIDLAFKIISQQKRKSIILKKRKSIIHLLNYIDTLNFNSNSSKFNIDFRLKNKYKTPLTYNLYLHRSSHRRSYYASFYKDSLNVIERENLCIIKLEDDYVNIIQPKNLNLVAMLMHILKQNEINMIDANGMIFYCVFLM
Ga0326762_1011155	Ga0326762_10111552	F013155	MELYQVVVIAIALANLAVTVWLLRLLIPVWQTLRKVVFVLDQYDFDKLVQQFLSNEKPVAETIDVKVSEKRDEGYKELTVTRVYKKPLDPREIQENFVRQMAEKLQ
Ga0326762_1012385	Ga0326762_10123852	F021443	MKYLLDDERLTFRFGPYYVTCYNYDYSYQINGILSFAVMDLVFKIINQQKRKSIVLKKRKPIIHLLNYIDILNFNSNSSKFNITFRLENKYKTPLIYNLYLHRSSHRRSYYASFYKDSLNVIERENLCIIKLEDDYPSRIQPKNVNLATMLIHILEQKEIDMIDANGIIFYCVFLM
Ga0326762_1013394	Ga0326762_10133941	F043237	MDLEKTARYIAQLSRHGYKYAIIGKLVRYDRELVKRLEYDGFVFYLCRLPSKKEVVSYCLPRTEGPFKVYCLSSKPLEFPNAPLKLHYDEKSQRLRLLAQKSFINDCLNAIEKASEVKYPSPKLYIAQVNKALRQLYSVLAHTYNDKERLFAIKRKVKHWVVEALKSQYGLKPKDAMLDYSRYVLKFSDVLRKKKSFRNL
Ga0326762_1013735	Ga0326762_10137351	F013155	MELYQVVVVAIALANLAVTVWLLRLLIPIWQTLRKVVFALDNFDFDEVSRKFLNNEKPLAENVIVKTSEKKEEGYREISITRVYKKPLDAKEVWEGIVRQMAEKLQ
Ga0326762_1013803	Ga0326762_10138031	F043237	MDLEKTARYIAQLSRHGYKYAIIGKLVRYDRELVKRLEYDGFVFYLCRLPSKKEVVSYCLPRTEGPFKVYCLSSKPLEFPNAPLKLHYDEKTGRLRLLAQKSFINACLNAIEKASEVKYPSPKLYLAHVNKLLRQLYSVLAHTYNDKERLSAIKRKVKHWVIEALKSQYRLKPKDAMLDYSRYVLKFSDVLRKKKSFRNL
Ga0326762_1015587	Ga0326762_10155871	F043237	MDLEKTAKYIAQLSRHGYKYAVIGKLLRYDKELVKRLEYDGFVFYLCRLPSKKEVVSYCLPRTEGPFKVYCLSSKPLEFPNAPLKLHYDEKSQRLRLLAQKSFINDCLNAIEKASEVKYPSPKLYLAHVNKLLRQLYSVLAHTYNDKERLRAIKRKVKHWVVEALKNQYGLKPKDAMLDYSRYVLKFSDVLRKKKSASVASATESGRGRG
Ga0326762_1015917	Ga0326762_10159172	F021443	MKCLLNDERLTLVFKHSYITCFNYDYGYYQSNEILSFAVIDLVFKIISQQKRKKSIILKKRKPIIHLLNYIDILNFGSNSNRFDVAFYLKNKYKVPLIRNLYLYRSSHRKRYYASFYKDSLSVIERENLCIIKLEDDYVNIIQPKNLNLVAMLMHILTKEEIDMLEGDGTIFYCIFL
Ga0326762_1017392	Ga0326762_10173921	F088087	RWSVMKASDGSVWMPVTVSSAPCEVCRRKSKSVVYECTKGKWVGVRVVACPEHAEKAIEQFIAGGEE
Ga0326762_1017392	Ga0326762_10173922	F080678	MFVRKVDAKTTPIEEIYDDWEKIWMGEREIRRFLAYTGLSAPPYNLRVEHFLKFPFLRGISARKFMRKLQKFGVTWSFNRDVVRHGVLQAVGYKWRDIEEFEHMRVFGRKEVSAHAGI
Ga0326762_1021011	Ga0326762_10210111	F021443	MKCMLNNEKLIFEFACPYPPYVTCYNDSYYQINEMLSFAVMDLVFKIINQQKRKSIILKKRKPIIHLLNYIDILNFNSNSSKFEITFPLENEYEMLLIYNLFLYRSSHQERYYNDLHKNNLKVIENKNSCIIELKYDGSDIIQPKNVNLATMLMRILKKEEIDVDLNGMIFYCIFLM
Ga0326762_1021827	Ga0326762_10218271	F021443	MKYLLNNGKLSFRFRDPYRIDYVTCYNYDYSYQINGILSFAVIDLVFKIVKQQERKSIILRKRKPIIHLLNYIDMLNFKSNSNKLAITFPLENKYKAQLIYNLYLHRSSYQRRYFKNLYKNNLKVIERENSCIIELEDDYASRIQPKNVNLATMLMHILEKK
Ga0326762_1022139	Ga0326762_10221391	F021443	MKCMLNNEKLIFEFVHPYPPYVTCYNDNCYQINEILSFAVIDLVFKIINQQKRKSIILKKRKPIIHLLNYIDILNFNLNSNKFNITFPLENEYELRLIFNLYLYRSSHRERYYKNLCKNNLKIIEHENSCIIRPESDSSTRIQPKNVNLTTMLMRILKKEEIDIDLNGIIFY
Ga0326762_1027500	Ga0326762_10275001	F043237	YIAQLSRHGYKYAVIGKLLRYDKELVKRLEYDGFVFYLCRLPSKKEVVSYCLPRTEGPFKVYCLSSKPLEFPNAPLKLHYDEKSQRLRLLAQKSFINDCLNAIEKASEVKYPSPKLYLAHVNKLLRQLYSVLAHTYNDKERLSAIKRKVKHWVVEALKNQYGLKPKDAMLDYSRYVLKFSDVLRKKKSAS
Ga0326762_1030003	Ga0326762_10300031	F021443	KQSKIFFMKCMLNNEKLTFKFAHPYPPYVTCYNYDYSYYQINGILSFAIIDLVFKIVNQQERKSIILKKRKPIIHLLNYIDILNFNSNSNKLAITFPLENEYEPLLIYNLYLHRGLHRERYYKDLYKNNLKVIEHKNLCIIKLEYDCSTRIQPKNVNLVTMLIHILEKKEIDTDLNG
Ga0326762_1031630	Ga0326762_10316302	F021808	MMTEEPPYGTIAWFFYEIDERQRQIYELVFDIDQKIAKVKDLLNEIDILKAQLETNVNV

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300033491: Hot spring sediment microbial communities from Norris Geyser Basin, Yellowstone National Park, WY, United States - NOR.PS_S

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences