Sample 3300029310

Overview

Basic Information
IMG/M Taxon OID	3300029310 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0121306 \| Gp0151717 \| Ga0134545
Sample Name	Human fecal microbial community of Hadza hunter-gatherer populations from Tanzania - 10010
Sequencing Status	Permanent Draft
Sequencing Center	University of Bologna
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	213429984
Sequencing Scaffolds	13
Novel Protein Genes	13
Associated Families	12

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	6
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	1
Not Available	1
All Organisms → Viruses → Predicted Viral	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Human Fecal Microbial Community Of Hadza Hunter-Gatherer And Regular Subjects From Tanzania And Italy
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Human Fecal → Human Fecal Microbial Community Of Hadza Hunter-Gatherer And Regular Subjects From Tanzania And Italy

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal distal gut

Location Information
Location	Tanzania
Coordinates	Lat. (^o)	-3.6347588	Long. (^o)	35.0828588	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F032286	Metagenome / Metatranscriptome	180	Y
F039198	Metagenome	164	Y
F047755	Metagenome	149	Y
F051935	Metagenome	143	N
F056682	Metagenome	137	Y
F062845	Metagenome	130	N
F067720	Metagenome	125	Y
F067844	Metagenome	125	N
F068855	Metagenome	124	N
F074899	Metagenome / Metatranscriptome	119	N
F087335	Metagenome	110	N
F096729	Metagenome	104	N

Family

Category

Number of Sequences

3D Structure?

F032286

Metagenome / Metatranscriptome

180

F039198

Metagenome

164

F047755

Metagenome

149

F051935

Metagenome

143

F056682

Metagenome

137

F062845

Metagenome

130

F067720

Metagenome

125

F067844

Metagenome

125

F068855

Metagenome

124

F074899

Metagenome / Metatranscriptome

119

F087335

Metagenome

110

F096729

Metagenome

104

Scaffold	Taxonomy	Length	IMG/M Link
Ga0134545_1000160	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	57183	Open in IMG/M
Ga0134545_1002846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium	8204	Open in IMG/M
Ga0134545_1003610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	6948	Open in IMG/M
Ga0134545_1005032	All Organisms → cellular organisms → Bacteria	5417	Open in IMG/M
Ga0134545_1006817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	4270	Open in IMG/M
Ga0134545_1009331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3346	Open in IMG/M
Ga0134545_1010363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii	3070	Open in IMG/M
Ga0134545_1022776	Not Available	1641	Open in IMG/M
Ga0134545_1037097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1108	Open in IMG/M
Ga0134545_1038733	All Organisms → Viruses → Predicted Viral	1067	Open in IMG/M
Ga0134545_1040702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1024	Open in IMG/M
Ga0134545_1060440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	725	Open in IMG/M
Ga0134545_1067482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	656	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0134545_1000160

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes

57183

Open in IMG/M

Ga0134545_1002846

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium

8204

Open in IMG/M

Ga0134545_1003610

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales

6948

Open in IMG/M

Ga0134545_1005032

All Organisms → cellular organisms → Bacteria

5417

Open in IMG/M

Ga0134545_1006817

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales

4270

Open in IMG/M

Ga0134545_1009331

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes

3346

Open in IMG/M

Ga0134545_1010363

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Faecalibacterium → Faecalibacterium prausnitzii

3070

Open in IMG/M

Ga0134545_1022776

Not Available

1641

Open in IMG/M

Ga0134545_1037097

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales

1108

Open in IMG/M

Ga0134545_1038733

All Organisms → Viruses → Predicted Viral

1067

Open in IMG/M

Ga0134545_1040702

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales

1024

Open in IMG/M

Ga0134545_1060440

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales

725

Open in IMG/M

Ga0134545_1067482

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales

656

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0134545_1000160	Ga0134545_10001607	F067720	MSSTTYEHFVDANKMYAAREQFRHLTKMVCDFVKVNKIDHLGNVTVMVRNAGQLPQPFWLGAACGGGSHSLSASVARA
Ga0134545_1002846	Ga0134545_10028467	F087335	MIELCFNDANFLPENREEEQYAEAALNNMLAVKTADMGMCILPCFYDAPLHRGMLCHLDDGTTLRIRPILNEVGEPELLIRCVMEETAEEMYQKVLNYDFDEPCAGNVPS
Ga0134545_1003610	Ga0134545_10036107	F056682	MKMQSRAGKVANQSVGQSEMYPASFWAFPSKNRSTIPIQELGKIYEKQEVL
Ga0134545_1005032	Ga0134545_10050325	F074899	MSGRKQWNKQAATSSFLNKKTPQSLIQHGLEGSTAVGKDEVGSSNLPSSSNKTL
Ga0134545_1006817	Ga0134545_10068173	F067844	MNTLAAETASAWYLILNRKLQTLPIYITQLSSYLPRPLTMGTQQVSAGAAVITPQHRSYRVPQGSPQVFGGP
Ga0134545_1009331	Ga0134545_10093311	F032286	VTPIRHRALVFNTRLFAGTAADDALVTGSTLSFCRLMCLCVKRRNIMLNDKRRSLLNSALFRAYNRTERKTISLFSLALIFTFDFAALSERRSCPEDRSRRFVLLGALDAALRQRTYPVRTVMQFSRFRCDCKTILAKNIALSRISKRSENAPKNANFHAYGQGRKRAEF
Ga0134545_1010363	Ga0134545_10103631	F062845	MEKTPFILHEKFRSDNNEQRKEHFQKKFERYIVDELSDTVPSKSCA
Ga0134545_1022776	Ga0134545_10227762	F096729	VEDSRNVGVFASGFASSPGSFFRRRWLRGGRRRSDGDFASESALVVDLIRSGSATRGFVNVWWFVVAAWFRETSAGSGFVAAEVARNTDLVVFA
Ga0134545_1037097	Ga0134545_10370972	F051935	MKRLLGLLMAVMVMMGGISCAVAENANPIVSDWLTELKSKRLIQIVEDEIGEGWTLYQPNGREEEENFSSAANLKEMRFLPVVAQKDNQLRLLILRRQGDLWKVSEQNDRALMRDGWMLQNFSAMPYGNSDSTYIYFDFVDENQTEWGLVLNLSAAYVSYFRMIYNAEGYGTTEIVFNYDRGMKFQFDAPFYFRLSYDVDPAERYSFVVEDFDLATCPLSMQDFFVPAVVSCGEEGAGLYIMAKQGIQPILVLNDGEMIEAIPQKEKLDWTIVYYQGNYL
Ga0134545_1038733	Ga0134545_10387332	F039198	MQIRNTEIQGTKYVQIYLTEEELQKKETKDLVKKYKQEKYSVATFVSGKENYPEILEKIITKQVELNKNVC
Ga0134545_1040702	Ga0134545_10407023	F068855	VPTVEAQGPQVRKSLAPQGLQAEKERENANVQNAGWLHSFDADYHYRGSDLHYHVNVSAALSEGGTVW
Ga0134545_1060440	Ga0134545_10604401	F056682	QSRAGKVANQSVGQSEMYSASFWAFPSKKRSTFSIQKLGKIYENQEVL
Ga0134545_1067482	Ga0134545_10674822	F047755	MESEKVKHLIDMINEMDIKDKLRLAICMSQSQWYGLIYNTKENYEKFDTMLKEVDEEYRTTLIYFGQNKYFNINFVMAKLMEMEQADRNKIALY

Scaffold ID

Protein ID

Family

Sequence

Ga0134545_1000160

Ga0134545_10001607

F067720

MSSTTYEHFVDANKMYAAREQFRHLTKMVCDFVKVNKIDHLGNVTVMVRNAGQLPQPFWLGAACGGGSHSLSASVARA

Ga0134545_1002846

Ga0134545_10028467

F087335

MIELCFNDANFLPENREEEQYAEAALNNMLAVKTADMGMCILPCFYDAPLHRGMLCHLDDGTTLRIRPILNEVGEPELLIRCVMEETAEEMYQKVLNYDFDEPCAGNVPS

Ga0134545_1003610

Ga0134545_10036107

F056682

MKMQSRAGKVANQSVGQSEMYPASFWAFPSKNRSTIPIQELGKIYEKQEVL

Ga0134545_1005032

Ga0134545_10050325

F074899

MSGRKQWNKQAATSSFLNKKTPQSLIQHGLEGSTAVGKDEVGSSNLPSSSNKTL

Ga0134545_1006817

Ga0134545_10068173

F067844

MNTLAAETASAWYLILNRKLQTLPIYITQLSSYLPRPLTMGTQQVSAGAAVITPQHRSYRVPQGSPQVFGGP

Ga0134545_1009331

Ga0134545_10093311

F032286

VTPIRHRALVFNTRLFAGTAADDALVTGSTLSFCRLMCLCVKRRNIMLNDKRRSLLNSALFRAYNRTERKTISLFSLALIFTFDFAALSERRSCPEDRSRRFVLLGALDAALRQRTYPVRTVMQFSRFRCDCKTILAKNIALSRISKRSENAPKNANFHAYGQGRKRAEF

Ga0134545_1010363

Ga0134545_10103631

F062845

MEKTPFILHEKFRSDNNEQRKEHFQKKFERYIVDELSDTVPSKSCA

Ga0134545_1022776

Ga0134545_10227762

F096729

VEDSRNVGVFASGFASSPGSFFRRRWLRGGRRRSDGDFASESALVVDLIRSGSATRGFVNVWWFVVAAWFRETSAGSGFVAAEVARNTDLVVFA

Ga0134545_1037097

Ga0134545_10370972

F051935

MKRLLGLLMAVMVMMGGISCAVAENANPIVSDWLTELKSKRLIQIVEDEIGEGWTLYQPNGREEEENFSSAANLKEMRFLPVVAQKDNQLRLLILRRQGDLWKVSEQNDRALMRDGWMLQNFSAMPYGNSDSTYIYFDFVDENQTEWGLVLNLSAAYVSYFRMIYNAEGYGTTEIVFNYDRGMKFQFDAPFYFRLSYDVDPAERYSFVVEDFDLATCPLSMQDFFVPAVVSCGEEGAGLYIMAKQGIQPILVLNDGEMIEAIPQKEKLDWTIVYYQGNYL

Ga0134545_1038733

Ga0134545_10387332

F039198

MQIRNTEIQGTKYVQIYLTEEELQKKETKDLVKKYKQEKYSVATFVSGKENYPEILEKIITKQVELNKNVC

Ga0134545_1040702

Ga0134545_10407023

F068855

VPTVEAQGPQVRKSLAPQGLQAEKERENANVQNAGWLHSFDADYHYRGSDLHYHVNVSAALSEGGTVW

Ga0134545_1060440

Ga0134545_10604401

F056682

QSRAGKVANQSVGQSEMYSASFWAFPSKKRSTFSIQKLGKIYENQEVL

Ga0134545_1067482

Ga0134545_10674822

F047755

MESEKVKHLIDMINEMDIKDKLRLAICMSQSQWYGLIYNTKENYEKFDTMLKEVDEEYRTTLIYFGQNKYFNINFVMAKLMEMEQADRNKIALY

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300029310: Human fecal microbial community of Hadza hunter-gatherer populations from Tanzania - 10010

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences