Sample 3300027091

Basic Information
IMG/M Taxon OID	3300027091 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114663 \| Gp0115665 \| Ga0209873
Sample Name	Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T2_30-Apr-14 (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0114663 | Gp0115665 | Ga0209873

Sample Name

Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T2_30-Apr-14 (SPAdes)

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	138784077
Sequencing Scaffolds	23
Novel Protein Genes	32
Associated Families	31

Dataset Contents

Total Genome Size

138784077

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Opisthokonta	2
Not Available	9
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	2
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Sarcoptiformes → Oribatida → Brachypylina → Oppioidea → Oppiidae → Medioppia → Medioppia subpectinata	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-LBS1	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida → Stentoridae → Stentor → Stentor coeruleus	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → cellular organisms → Eukaryota → Opisthokonta

Not Available

All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica

All Organisms → cellular organisms → Eukaryota

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Sarcoptiformes → Oribatida → Brachypylina → Oppioidea → Oppiidae → Medioppia → Medioppia subpectinata

All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria

All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae

All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-LBS1

All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida → Stentoridae → Stentor → Stentor coeruleus

Ecosystem Assignment (GOLD)
Name	Groundwater Microbial Communities From The Columbia River, Washington, Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Sand → Unclassified → Sand → Groundwater Microbial Communities From The Columbia River, Washington, Usa

Ecosystem Assignment (GOLD)

Name

Groundwater Microbial Communities From The Columbia River, Washington, Usa

Type

Environmental

Taxonomy

Environmental → Terrestrial → Soil → Sand → Unclassified → Sand → Groundwater Microbial Communities From The Columbia River, Washington, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater river biome → microcosm → sand
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

freshwater river biome → microcosm → sand

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Subsurface (non-saline)

Location Information
Location	USA: Columbia River, Washington
Coordinates	Lat. (^o)	46.372	Long. (^o)	-119.272	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

USA: Columbia River, Washington

Coordinates

Lat. (^o)

46.372

Long. (^o)

-119.272

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F000212	Metagenome / Metatranscriptome	1580	Y
F000331	Metagenome / Metatranscriptome	1285	Y
F001799	Metagenome / Metatranscriptome	632	Y
F005176	Metagenome / Metatranscriptome	409	Y
F005672	Metagenome	393	Y
F007402	Metagenome / Metatranscriptome	352	Y
F015696	Metagenome / Metatranscriptome	252	Y
F020000	Metagenome / Metatranscriptome	226	Y
F033776	Metagenome	176	Y
F034156	Metagenome / Metatranscriptome	175	Y
F034611	Metagenome / Metatranscriptome	174	Y
F038918	Metagenome	165	N
F044498	Metagenome	154	N
F046195	Metagenome	151	Y
F050934	Metagenome	144	N
F051728	Metagenome / Metatranscriptome	143	Y
F053809	Metagenome / Metatranscriptome	140	N
F061552	Metagenome / Metatranscriptome	131	N
F062748	Metagenome / Metatranscriptome	130	N
F065810	Metagenome / Metatranscriptome	127	Y
F067428	Metagenome / Metatranscriptome	125	N
F067432	Metagenome / Metatranscriptome	125	Y
F082695	Metagenome / Metatranscriptome	113	N
F085203	Metagenome / Metatranscriptome	111	Y
F088294	Metagenome	109	N
F091422	Metagenome / Metatranscriptome	107	Y
F092936	Metagenome / Metatranscriptome	107	N
F096670	Metagenome	104	Y
F100053	Metagenome / Metatranscriptome	103	N
F100499	Metagenome	102	Y
F104469	Metagenome / Metatranscriptome	100	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0209873_1000444	All Organisms → cellular organisms → Eukaryota → Opisthokonta	6376	Open in IMG/M
Ga0209873_1000778	Not Available	4580	Open in IMG/M
Ga0209873_1000825	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	4436	Open in IMG/M
Ga0209873_1001310	All Organisms → cellular organisms → Eukaryota	3327	Open in IMG/M
Ga0209873_1001327	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Sarcoptiformes → Oribatida → Brachypylina → Oppioidea → Oppiidae → Medioppia → Medioppia subpectinata	3304	Open in IMG/M
Ga0209873_1001432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3155	Open in IMG/M
Ga0209873_1005927	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira oceanica	1411	Open in IMG/M
Ga0209873_1009370	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	1137	Open in IMG/M
Ga0209873_1016334	Not Available	871	Open in IMG/M
Ga0209873_1016338	All Organisms → cellular organisms → Eukaryota → Opisthokonta	871	Open in IMG/M
Ga0209873_1017298	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	849	Open in IMG/M
Ga0209873_1017322	Not Available	848	Open in IMG/M
Ga0209873_1019079	Not Available	809	Open in IMG/M
Ga0209873_1024036	Not Available	725	Open in IMG/M
Ga0209873_1025113	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Synechococcus phage S-LBS1	709	Open in IMG/M
Ga0209873_1027807	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	676	Open in IMG/M
Ga0209873_1028215	Not Available	671	Open in IMG/M
Ga0209873_1030919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	642	Open in IMG/M
Ga0209873_1036092	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida → Stentoridae → Stentor → Stentor coeruleus	596	Open in IMG/M
Ga0209873_1036468	Not Available	593	Open in IMG/M
Ga0209873_1037451	Not Available	585	Open in IMG/M
Ga0209873_1039184	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	572	Open in IMG/M
Ga0209873_1041385	Not Available	557	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0209873_1000444	Ga0209873_10004442	F082695	LFFVLRSFESETGDETDVVKWAHKLMNKSVANRTITKQEAMCELGQLPMVICSEGIETVSITGSTRCSNETSTILSQYKKRPDTQEHLSLHEFFHTKKNKRLPATRSQREIVPHYVGGSGQPVYPLTKQSISYARSEILKHMPWSQKNPLPNDCDWVTLFQDFLNDARCPHSVTIGYERAKLRHELRKKGIEEACQPDTEHSNPTDDLDDDEIGDVIAISESMGYTTDEMDNLEKSGFFIGKDYEWWKRIHTVSCSFMIEMKSSPNEIWIFQNF
Ga0209873_1000778	Ga0209873_10007781	F053809	MMVTMLRQEIYTHYLFHKSNQYNSIMRPYTYTPKSHIRPYIRNTLLLINDQLPLLHLHVNYLSQLQLINRRRLHDFDVLSGKRHTRGAGAIRVAEIGAAYAEDRIRAHLGALIVDNNDLLAEWFRLKTYTDGHTPLICSNRPALQMNTMPFDTDGVCTIQGDGIPHPADMRSTIQIIERILLPHAQSAARCCTITDYRNHNAAYMCVREFVRETKRSLDDVRQRLYFLQYDEIDLWRSVQNFEYNIEDSSTIIRELFANTQPTQPFPQVVTPTTNDVAHDARKSPNYLTR
Ga0209873_1000778	Ga0209873_10007784	F092936	LVIIAAIIIQSHIPLAPGALFTVENPAIVQKWMANGTLPLIFTAQSIKSVLHESELYEIPPVPQSKSQHGFILSGVDITLLNMQVTNINCGGAMCDGLNMYQNSVTADRCPCYNVLDREGKVCLVLSLKVSDPKNNLQFCVHNHTSKSLTQLFMKRIPKGAVAATITGNQKHMGNLSAKVMDMLALGNEYNGFNISGWIKRGTIADSGVVQPPTGSKWDKPQQVDSGGLTYHLTKIAYATPPSDRILGEYQFNAGSLV
Ga0209873_1000825	Ga0209873_10008251	F061552	KGFGNAGCSAEHDIRLITTRHLNLSSSSSSDTATCRYIATVKALTKMKDQEDMKRGVHITGTITMEETHYHSKCIHLETTLVNEKIMGFDCPILDISDSKMGRVGLAILVDMETTMVGNRIKKLVRKNMKCWTQPSIYAWPIVNSGLKIIDGVGLLILNDLAKSVYNFITTVQSEGNGTGSANRS
Ga0209873_1001310	Ga0209873_10013102	F082695	LFVLLSYESQTGDESDVARWAHKLMNRSVANRTITKPEAMCELGQLPMVICSESIETVSITGQTRCSIDTTTSTILSQYKNRPNTQERLSLHEFYHAKRNNHSMATAANHREFVPHYVGGRGQPVYPVTDTKQSISYARSEILKHMPWSQKNPMPNECDWVAIFKEFLQDPSCPAGVKLGFERAKLRYELRRKGIQEVFQPDTEHSNATDDLDDDEIGDVIALTESLGYTEDELDKMEENGFCIGRDYDWGRRVYTVSNICII
Ga0209873_1001327	Ga0209873_10013272	F044498	MPRQFNKRKSSTPNAINCTNIECHCVPPIGFQNMQTDLNKFSYVANNERVLLLSRYSTNCSLTELLELQSPMAEIQSETVSILSFLNGAIQRPLSYEQHIMNQKLTCAKKKFEKSCLLAYREFCDMELEHNLLVMQCCNDEMVLCSKAYDHHCYPCCKPSNEKHSTSDFNDKKTCETNIVFDGLQDEGIMAPDYYPDGLQYIFPTPSIESCLDSVNIECVRLLLSLRHCHKHI
Ga0209873_1001327	Ga0209873_10013273	F038918	MDEMDDYYRNKISLCPKYIEWTRLSDNSEMFYCKTTYRKPDDETKLLAHIKRTIVTNDRAAQKRKKPKSESLTYDELLEKVRNNDVYKEFMKLEPGKQKFYDCKNYEKGNADDEIKLMKRISNRMNCNKRRTSGVDVEIGKRGTVVADSVGVDVEIQTKDAAVALLSLNNPRGGDATSPLNNVVIKEGGGAEAEEEDGGNGNNLGWDKEETTLTDGAIDPGGDVGAD
Ga0209873_1001432	Ga0209873_10014323	F046195	MKVSRRWIEWAHGPGAEDGQPLATSLCDLASAPGAGSIEVADPALIAELVDVAGLYVNPCRGDALHDMGPWWMGQPRRIISEGRASLRAADSAAKSPAVDGQPE
Ga0209873_1005927	Ga0209873_10059271	F050934	MPPEHTLIIEGDITSSRSNTTRQRIDRHLRHRIITTCGDANVMMGSKHIDPALCIYIGAYLICIDNKHLTDKVPRGNGTLCRVLGMKLNENAQSYKCKNYYGKKVWTVNAADVEWVECEHVNKTSFLTQLESQIKELKCQLDLTPNDHKIERKKIKSKLDDLNNKLAKEMTGRKFKLEPEQFSPEVTVKHYQTSSKKVAFRCKMKQIPANSNDATTGHKLQGMSKDAIIVSSWPTGGLAAMFKNWEYVVLSRVRTLSGLYLVKPIDMDKSFQPSPQLASYMDKIRKFEKDMLEKRKQAISKTFS
Ga0209873_1008295	Ga0209873_10082951	F088294	RARHKDLYDEVKGGIMYCPECKQTVSTIDIVNKALQRWKDCLIPGDRAQYNRPDTIIPLSKERLDMAAYTFAYHMNGGCAIENDPFWGDKNVRETLLRYRFEEHSFSHSASCFKKDCECRFLFPFMSTDYTYIHEDKGDKDQNKTSWYFLDGSINTVYPFMVLPKRPMGCQFINAHNKTISDVFNFNTNVQIGDASQVFYSTLYTSKSTQDEDSEKQIRIGRAVIKRIKRVMNDNQEGEPSFGEGLSRVLSGLNAATTRNVISATMAHLIPCNDGSRFVYSHTFSDLLVGQMEATLEGHDISVRIRSNKFENKIITWPDSLADDYIHRPIEHELDQICFYEMTRCYKKGFNAFRNIQGGVKKYKFKETHPGHKFSHLIQLRFPSIPRIALPKGKLCLLDEL
Ga0209873_1009370	Ga0209873_10093701	F000331	HFEHLCDSYGIKRKPTTVRNPQANAILERVHQVIGQMLRTAEIDMAKSVVPDDVDVFIDNAAWAIRSTYHTVLKASPGAAIFGRDMLFDIPFLADWNKIGDYRQSQTDRSAERENSKRIDYDYKVGDKVLIRKDGILRKAESIWKKEPWTITTVHTNGTIRIQCGTKSERINIRRVTPFSEELLI
Ga0209873_1009370	Ga0209873_10093702	F007402	MVPPHHAGKFLPKTKGFFPHDFTLIASVVGESVIGHGIVGKDIPIMARLAEARRWSKR
Ga0209873_1016334	Ga0209873_10163344	F020000	AVAITAVDRFTNALEYTGATMSAVDDWMQVDCHSSSFTFAANVTSSANFTLALEASFNGNGNWFTVDTSKTINSAGQYVYFYDGKPCTKIRMRIASISSGTVTLAPHIVVAYHG
Ga0209873_1016338	Ga0209873_10163382	F100499	NGKQAGKVKGFRVTAETEEKMTNEQRIQLIKGAIDHVDINCSQFSIKNSEIVTKSMVKQWAFKFDKRMIRHASDNEINSLPYGF
Ga0209873_1016748	Ga0209873_10167481	F000212	MKLITKIIVMTFFLMNSTMSLGLRTETQCHPQCSWKCDDPHCPAICDPVCEPPKCHTSCAEPKNAICDVKCEKPECEIKCPDKGCEMFDCPKCVTVCKQPHCVTHCQAPKPECEAVCEEPRCDWKCHKPNCPKPKCELVCENPNCVPKVECCPCAMGAPRVAQPFPFFKETASNPNCCGCNKPLV
Ga0209873_1017298	Ga0209873_10172982	F034611	MLQSKTVLSLTIDLLANNAFNHLKDEEISALHHLILKLQEPLTTIQQNLLLTFWNHAYTGDLPSALLHRCNTVLQQLGRSPMEEVIMEIEMY
Ga0209873_1017322	Ga0209873_10173221	F015696	MKAANAMTKGAKGASPSKSDMPSPARAAAGTTLKKFSPSSPQKKKDDRNKPQIFNLMHPSGTCYGWAFYNFYHAKEYLKGLSNRLGMTTVIGGIEFRPFCNLTTKWAKEAEFNNCIWVIRIDLELDGDENCFPLTAHVAYGNKIARGVTAQNIWEKGEVEVRTVTLSHAEALDLDGHFTVVHDQAADDAFDAAIKEADAELEDLI
Ga0209873_1017781	Ga0209873_10177811	F104469	SESPVESDYSCFTTSQQCVTSLMYLLDDMECPDYGFKSIMDWARQCFEAGFDFNPKCKTRLGNLKWMYDAIHNAEHMLPHLEPIELPEPLPNLKTMNVICYDFVPQLLSILQNKEMMSANNLVLDPNNPLAMYKPHDSRLGEALSGSVYRDMYHHLVSNPSKQLLCPLICYTDGTQVDSLSRFGVEPFLFTPAVLSHAARCKADAW
Ga0209873_1019079	Ga0209873_10190792	F033776	MANANNLTKDRAARSKGLNFTVNIRLSREEIEAARRLGDGNISMGVRWCIRYANGREMKPIKLSTMLRSAAVLAAQLEAA
Ga0209873_1020277	Ga0209873_10202771	F100053	AKVAQKIWGSSVPRLKGSTVRESGHRKPQSLVKVPRELLKLQQKVSIAIDIFFVNGHIFFMTYSRKICFTTVTHLVNRKVNGVWAAMHQIYQMYMLRGFHIVEIAGDGEFVWIADQVASLPTNPTLDLAAANEHVGLIERNIRFLKEKVRSLRHSLPFERIPALMLIRMVLHAVPFMNSFPRKGGLKHYPPSAIMTGAQLHMNHLRLKFGSYCQVAEDVTPRNSLAARTRAAISMGPSGNLSGGHRFLALDTGKIIVRNRW
Ga0209873_1020943	Ga0209873_10209431	F085203	KNALKKWRKYVQDVKDKKLFDGSRSLKLNIVLERIQRRTIKEVAERLKGFIFAAPAIKAVIKKMDSLVKRKPKQAFDKWRKYVQAVNNNELLDGVRSQKLLVVLTRVPVRRMKDATERILGDGSKVKGAIKKIYATMQRMPKTALEKWRKYMQGLRDKSFFDNLRSAKLLNCLSRIPLRKTRDAAQRIIGGGSKIKGALNTLVNGLKNIPKNALRKIRQVIQDIKDKKLYDNARSFKLQNVLEKVQRRTLKEAHERV
Ga0209873_1024036	Ga0209873_10240362	F067428	NSHTKTKLEAYDIDWFDLSATTNECLKHTNIKNLPVTQEGQLTFLLNKFETSDLKTAFADRIGKVGTPARTAFYPLPVRKDKVIRSFLELIYDGRSIIISESKDAFR
Ga0209873_1025113	Ga0209873_10251133	F034156	VDPATLAAVLGLGGAGVSALWKIAGGLGRFEAKTTTILGAMQVMLEDHEDRLRAIERKR
Ga0209873_1027807	Ga0209873_10278071	F065810	LQYPKHSEITSKIFQIEYHEHLSLTAKFILNSFHNKYIYYAIDDILYSLRSNPSERDNLLAVLYSPILSLQNDFLVNFFDIWIRDISLNEISKSNKFLKQEAENLEKVNLITIKLFYKTRVPIKKQESLW
Ga0209873_1028215	Ga0209873_10282151	F062748	TIVQGRYPTLKYFKVGALKSLPGAKSQYVGHGGRLHSDYPQSVEELEPRFRPVSIIVGLNSFNFMWLNDRTSRESEIRQMTVYPGEMIMFTNHCLHAGGENSTNEEQTRLFAYLASDESHFPSGEVTTWDWQREDNNPLISKPSRKANSQFRCKLASYLGGGT
Ga0209873_1030919	Ga0209873_10309191	F091422	EQMMASVRLTHAASDQDFEDVHALATKELGPGLASLAEIKRVDALTGASIWVIRRNSEVTGFLAPLALTAAGVAALVDNTFDAAHIDQKWVARVGEPLAGFYCWCYAGKDQVSRGALVLGLRTLIDRHFPDLPFFGRDSTDAGARIMRHLGFFPFDSTPHLFWRCASVMEMAA
Ga0209873_1036092	Ga0209873_10360921	F051728	QRMPKNALEKWRKYLQGLKDKSFFDNLRSAKLLNCLSRIPTRRTRDAAQRILGGGNKIKGCLQNLVNGLKNIPRNALKRLRQVVQDIKDKKLFDNARSAKLQISLERLQRRTLKEAHERVRGLMFASPAVKAVIKRMDGLLKRKPKQAFDKWRKYVQAVNNKEILDGVKSQKLKALLDKAVRRTLRDATERILGDGSK
Ga0209873_1036468	Ga0209873_10364682	F001799	MDKHLLAQWAKNLLNDDFFKDVIDNLKKEQISVIINTSAEESDRREDAYRHIKTIELITGHLEGLASETVIREKKWKIL
Ga0209873_1037451	Ga0209873_10374512	F005176	VTRGNEDGSGAPLQPPPEQEDEKISLFKRISPFDASMELKFELDTRLTVSCVVAVASAYGLLTVSIALDSIPLAFGNAVILLLILFVLFGWRELLGEFKKRAGN
Ga0209873_1039184	Ga0209873_10391841	F096670	MLWGQRITVYTDHKNLTRDGLGLTSDRVARWRILLEEYAPEIIYIKGIHNTVADAISRLDYDPKLNTTNEYNHATHVMSTKVESNQKWMMFSKFWSCYNETQDQDEINPIKMNQVFANRSEDEEIYPLTVKEIVEAQKADPILTH
Ga0209873_1040475	Ga0209873_10404751	F067432	MFDCPKCVTVCKQPHCVTHCQAPKPECEAVCEEPKCDWKCHKPNCPKPKCELVCENPNCTPKVECCPCATTGAGATPAFPFFKETETNNRCCGCGKTGSGAPTEQGRIVSTNINKGWTNRRKQYELICLY
Ga0209873_1041385	Ga0209873_10413851	F005672	MTYPTHRLDHVTATAADWGLCQPKEHGEDERKRPLTAVATDLNGRLKQCCKSADSPSGAALEMRRHLALFARYGLPNPKATQLVRDLTMKAFTAHKR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300027091: Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T2_30-Apr-14 (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences