| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300013902 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0118445 | Gp0134420 | Ga0116620 |
| Sample Name | Baboon gut microbial communities from fecal samples in Kenya - F11 |
| Sequencing Status | Permanent Draft |
| Sequencing Center | Duke University |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 95218814 |
| Sequencing Scaffolds | 2 |
| Novel Protein Genes | 2 |
| Associated Families | 2 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Dorea → Dorea formicigenerans | 1 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Ruminococcaceae bacterium D5 | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Baboon Gut Microbial Communities From Fecal Samples In Kenya |
| Type | Host-Associated |
| Taxonomy | Host-Associated → Mammals → Digestive System → Large Intestine → Fecal → Baboon Gut → Baboon Gut Microbial Communities From Fecal Samples In Kenya |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Animal → Animal distal gut |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | ||||||||
| Coordinates | Lat. (o) | 2.717 | Long. (o) | 37.1 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F056682 | Metagenome | 137 | Y |
| F067844 | Metagenome | 125 | N |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| Ga0116620_1001472 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Dorea → Dorea formicigenerans | 5273 | Open in IMG/M |
| Ga0116620_1010222 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Ruminococcaceae bacterium D5 | 1182 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| Ga0116620_1001472 | Ga0116620_10014724 | F067844 | MNTLAAETASAWYLILNRKLQTLPIYITQLSSYLPRPLTMGTQQVSAGAAVITPQHRSYRVPQGSPQVFGGP* |
| Ga0116620_1010222 | Ga0116620_10102222 | F056682 | MKTQSRAGKVANQPIGQGKMYSASFSAFPSKNRTIFPIQELRKIHENQEVL* |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |