| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300011281 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0103597 | Gp0123893 | Ga0138295 |
| Sample Name | Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_T0_6R (Metagenome Metatranscriptome) (version 2) |
| Sequencing Status | Permanent Draft |
| Sequencing Center | DOE Joint Genome Institute (JGI) |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 16169583 |
| Sequencing Scaffolds | 7 |
| Novel Protein Genes | 7 |
| Associated Families | 6 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| Not Available | 5 |
| All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium | 1 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Xylanimonas → Xylanimonas oleitrophica | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria |
| Type | Engineered |
| Taxonomy | Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Austria: Klosterneuburg | |||||||
| Coordinates | Lat. (o) | 48.3 | Long. (o) | 16.2 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F000344 | Metagenome / Metatranscriptome | 1257 | Y |
| F017318 | Metagenome / Metatranscriptome | 241 | Y |
| F051952 | Metatranscriptome | 143 | N |
| F052619 | Metagenome / Metatranscriptome | 142 | Y |
| F090071 | Metagenome / Metatranscriptome | 108 | N |
| F105419 | Metagenome / Metatranscriptome | 100 | Y |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| Ga0138295_107683 | Not Available | 903 | Open in IMG/M |
| Ga0138295_116232 | All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium | 527 | Open in IMG/M |
| Ga0138295_121388 | Not Available | 528 | Open in IMG/M |
| Ga0138295_125889 | Not Available | 1132 | Open in IMG/M |
| Ga0138295_130809 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Xylanimonas → Xylanimonas oleitrophica | 565 | Open in IMG/M |
| Ga0138295_130956 | Not Available | 734 | Open in IMG/M |
| Ga0138295_135700 | Not Available | 672 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| Ga0138295_107683 | Ga0138295_1076832 | F017318 | MGIPLLAAPLKFERTVEGLFDISCDGINPSVGLFNFSLSDLPNNSDFTNLFDMYRIDKIEVAWYPEYTVLSDSGLVSNAVDVQVNTAIAQISNTPTVVSDVLQYKTCVGTGITQIHKRSFQPSYLMDGICPCSCFLSCNNATANWYGVVYGVAPTGTAMLFKSRAKFFMSFVQSR* |
| Ga0138295_116232 | Ga0138295_1162321 | F105419 | MRKFFALGALMVAAAVSNGCISNTMYGCEITETLAPGASEGEVVMKHGAPDNIVYLGNQYCNPQTGECGEVDKYLYEYRIGGGTTLLGWLFASDEFHNIAYLIEGGRVMGGGYVGEGKGSIILGNNFGVVSTPLGVFDMNFG |
| Ga0138295_121388 | Ga0138295_1213881 | F000344 | MRPRHPHAAESGVGKHTARESERVQACAAGKERVTNAHSHKLA |
| Ga0138295_125889 | Ga0138295_1258893 | F051952 | PKNPRQTIAPDHFTSTALSENSWRILGKVTENEVTLVRYFLSKIVYTDEIVTLEETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRSIFTSLEDVVSANPQDRLIRMREVFGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTNLGTSDTSRFDYLEFLFRNFNTSRVQLFPQKKPGEKLHSSSN* |
| Ga0138295_130809 | Ga0138295_1308092 | F090071 | VTGVRRILDNVVDRALATRHAEAWYVATILATAAASWALLTIARALTATTKETP* |
| Ga0138295_130956 | Ga0138295_1309561 | F051952 | RMPKNPRQTIAPDHFTSTALSENSWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGPEVFTFRAVFTSLEDVVSANPQDRLIRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKDMAYDGSPSWQEVAMADTNLGTSDTSKTDYLEFLFRNFNTNRVQLFPQKKPGEKLHSSSN* |
| Ga0138295_135700 | Ga0138295_1357001 | F052619 | MNTPVYRPVHKFSRTVEGAYDIICDGITPSLSGLIFQLSSLPSFTDFTNLFDMYRITKIEIDWVPEYTELTDAALVSNAVNVRFNSVVDISDAAAPLAVNDLLQYETVKSTSITKGHSRSWKPCFLMNALVPCSCWLPTSAPNERHYAIKVAVPPTGVA |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |