NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300009897

3300009897: Microbial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S10



Overview

Basic Information
IMG/M Taxon OID3300009897 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0120440 | Gp0149072 | Ga0131750
Sample NameMicrobial communities of marine sponge Stylissa flabelliformis from Great Barrier Reef, Australia - S10
Sequencing StatusPermanent Draft
Sequencing CenterUniversity of New South Wales
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size36822250
Sequencing Scaffolds17
Novel Protein Genes20
Associated Families13

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available17

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameSponge Microbes In A High Co2 World
TypeHost-Associated
TaxonomyHost-Associated → Porifera → Sponge → Unclassified → Unclassified → Marine → Sponge Microbes In A High Co2 World

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Host-associated → Animal → Animal corpus

Location Information
LocationDavies Reef, Great Barrier Reef, Australia
CoordinatesLat. (o)-18.833Long. (o)147.683Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F007683Metagenome / Metatranscriptome346Y
F010384Metagenome / Metatranscriptome304Y
F013612Metagenome / Metatranscriptome269Y
F020857Metagenome / Metatranscriptome221Y
F022150Metagenome / Metatranscriptome215Y
F038110Metagenome / Metatranscriptome166Y
F041044Metagenome / Metatranscriptome160Y
F041611Metagenome / Metatranscriptome159Y
F076933Metagenome / Metatranscriptome117Y
F083784Metagenome112Y
F085218Metagenome111Y
F093358Metagenome / Metatranscriptome106N
F100481Metagenome102N

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0131750_103676Not Available1235Open in IMG/M
Ga0131750_104138Not Available1150Open in IMG/M
Ga0131750_106660Not Available874Open in IMG/M
Ga0131750_107156Not Available842Open in IMG/M
Ga0131750_108157Not Available785Open in IMG/M
Ga0131750_108717Not Available760Open in IMG/M
Ga0131750_108906Not Available752Open in IMG/M
Ga0131750_108933Not Available751Open in IMG/M
Ga0131750_110001Not Available710Open in IMG/M
Ga0131750_111191Not Available671Open in IMG/M
Ga0131750_111192Not Available671Open in IMG/M
Ga0131750_111326Not Available667Open in IMG/M
Ga0131750_112110Not Available646Open in IMG/M
Ga0131750_113868Not Available603Open in IMG/M
Ga0131750_115573Not Available567Open in IMG/M
Ga0131750_117755Not Available530Open in IMG/M
Ga0131750_117767Not Available530Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0131750_103676Ga0131750_1036761F010384IQPQLGIRKRFIRSLLGVDRCSLSWGSGRGLLGVYQGWTDAASAGDLKEVY*
Ga0131750_104138Ga0131750_1041382F038110MVERCSPAVSEDRGHTSKVDGPESLAISICDVSYKLMNLKIILFLIHCLMDMPTSQARLSYLAMSDIAVRVVSEDR*
Ga0131750_106660Ga0131750_1066602F010384MQPQLAIWKRRIISLLVVNRCSLSWGSGKGLLEVYQRWTDAASAGDLKEVD*
Ga0131750_107156Ga0131750_1071562F041044MPKRIEMALPVPTKPLLKTSPDAAMLFAPFECTHSPPPVLPFLLTQNLSPKDVAGSDIMKLKVS*
Ga0131750_108157Ga0131750_1081572F013612MKITRSSQLKLFRAHSRYIHHETFSFMMSRLAMSLGLRFCVSRKDRTRGGGWVHLKGANSMAAFGLIFRGDLVGTGKAIFVLFGINGVGNKRSHLVGPPFPEFKAHFSATAGWHFSRDL
Ga0131750_108717Ga0131750_1087171F007683LKGISFMHDTFSLMMSLPAMSFGDRFCFCRKGGIGGGGWVHPKDANSMATSGLVSRRNLVGTGRDISVHFSVNGVTNK*
Ga0131750_108906Ga0131750_1089061F020857MLSTIKDYSGDIFVLFLQDYCALLESPMKMNFTLAVAPPFVHPMTSLPATPTHSVQKYGFFGEPTRRRQVAKYGNLKRCESVIFW*
Ga0131750_108933Ga0131750_1089331F038110PAVSEDRGHMLKVDGPESLAISNRDVSYKLMNLKIILLLIHCLVDMPTSQARLSYLVMAERYRTVRMMVSEDR*
Ga0131750_110001Ga0131750_1100011F020857VLFLQDYCALQELPMKMNFTIAVAPPFVHPITLLPATPTHSVWKYDLFSEPTRRRQVAKYGNLKRCESLSFCGDIESLEPSKF*
Ga0131750_111191Ga0131750_1111911F020857MKMNFTLAVAPPFGHPMMSLPATPTLSVRKYGFLSEPTRWRQVAKYGNLERCESLSFSGDIESLEPSKF*
Ga0131750_111192Ga0131750_1111922F093358PESLAISIRDVSYKLMNLKIILLLIHSLVDMPTSQARLSYLVMAERYRTVRVMVSEDR*
Ga0131750_111326Ga0131750_1113261F010384MQPQLGIRKRFIRSLLRVDRCSLSWASGRGLLEVYWGWTDAASAGNLEEV*
Ga0131750_112110Ga0131750_1121102F010384MQPQLGMWKRFIRSLLGMDRCSFSWGSGRDLLEVYQRWTDAASAGDLEEVY*
Ga0131750_112624Ga0131750_1126242F100481VADIVSVTMPLLSIKDLAVAISTRAGPAEDDPPLYKLGSKPVQAVCKGESGALN*
Ga0131750_113868Ga0131750_1138681F010384MQPQLGIWKRFISSLLGVDRCSLSWGSGRGLLEVYQGWTDAASAGD
Ga0131750_114596Ga0131750_1145961F041611MLELKFAIYYRAVSLPSQASYAVLAEESQAFFKHSLHTKSISNSAILRNDYISLLSDLCACVHIKKMASQGSHSSSERFESPCVTSNLEKAMGWCTAQ*
Ga0131750_115573Ga0131750_1155731F083784MDFNDTPFNVTMEAETTVVSAEIPILNDEINEAEEEFVVVLEVVSDTTNSEEFTTNVTVCRIPASDCKCRAECLHGLN*
Ga0131750_117631Ga0131750_1176311F076933MIYANCGAIAVITSTTYMTIVKLFDEYFAPFSPEVIRPLIMTPTSILNDIILSMETERSVKACC*
Ga0131750_117755Ga0131750_1177552F085218YRAESLPSQASYAVLAEESLTRPDFLQTLPAHQQYF*
Ga0131750_117767Ga0131750_1177671F022150LVGPPFPEFKARFSATVGWHFSRDLTRRLLIGGCGQSHVFAKHG*
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