Sample 3300009206

Basic Information
IMG/M Taxon OID	3300009206 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0117969 \| Gp0126339 \| Ga0103750
Sample Name	Microbial communities of wastewater sludge from Singapore - Sludge11_b2_February
Sequencing Status	Permanent Draft
Sequencing Center	Singapore Centre on Environmental Life Sciences Engineering (SCELSE)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

3300009206 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0117969 | Gp0126339 | Ga0103750

Sample Name

Microbial communities of wastewater sludge from Singapore - Sludge11_b2_February

Sequencing Status

Permanent Draft

Sequencing Center

Singapore Centre on Environmental Life Sciences Engineering (SCELSE)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	232203882
Sequencing Scaffolds	24
Novel Protein Genes	27
Associated Families	23

Dataset Contents

Total Genome Size

232203882

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1
Not Available	12
All Organisms → cellular organisms → Bacteria	1
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified ssDNA viruses → Circovirus-like genome RW-C	3
All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Vannellidae → Vannella → Vannella robusta	2
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1
All Organisms → cellular organisms → Eukaryota	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora

Not Available

All Organisms → cellular organisms → Bacteria

All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified ssDNA viruses → Circovirus-like genome RW-C

All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Vannellidae → Vannella → Vannella robusta

All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila

All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium

All Organisms → cellular organisms → Eukaryota → Opisthokonta

All Organisms → cellular organisms → Eukaryota

Ecosystem Assignment (GOLD)
Name	Microbial Communities Of Wastewater Sludge From Singapore
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wastewater Sludge → Microbial Communities Of Wastewater Sludge From Singapore

Ecosystem Assignment (GOLD)

Name

Microbial Communities Of Wastewater Sludge From Singapore

Type

Environmental

Taxonomy

Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wastewater Sludge → Microbial Communities Of Wastewater Sludge From Singapore

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

Unclassified

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Water (non-saline)

Location Information
Location	Singapore
Coordinates	Lat. (^o)	1.2	Long. (^o)	103.45	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

Singapore

Coordinates

Lat. (^o)

1.2

Long. (^o)

103.45

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F000203	Metagenome / Metatranscriptome	1619	Y
F000606	Metagenome / Metatranscriptome	993	Y
F001679	Metagenome / Metatranscriptome	653	Y
F004323	Metagenome / Metatranscriptome	443	Y
F007073	Metagenome / Metatranscriptome	358	Y
F008498	Metagenome / Metatranscriptome	332	Y
F009934	Metagenome / Metatranscriptome	311	Y
F011154	Metagenome / Metatranscriptome	294	Y
F014467	Metagenome / Metatranscriptome	263	Y
F014836	Metagenome / Metatranscriptome	259	Y
F025295	Metagenome / Metatranscriptome	202	Y
F026814	Metagenome / Metatranscriptome	196	Y
F030999	Metagenome / Metatranscriptome	183	Y
F037503	Metagenome / Metatranscriptome	168	Y
F039594	Metagenome / Metatranscriptome	163	Y
F042865	Metagenome / Metatranscriptome	157	N
F051952	Metatranscriptome	143	N
F052619	Metagenome / Metatranscriptome	142	Y
F056539	Metagenome / Metatranscriptome	137	Y
F058934	Metagenome / Metatranscriptome	134	N
F061786	Metagenome / Metatranscriptome	131	Y
F091427	Metagenome / Metatranscriptome	107	Y
F098810	Metagenome / Metatranscriptome	103	Y

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0103750_1003687	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1568	Open in IMG/M
Ga0103750_1007210	Not Available	1174	Open in IMG/M
Ga0103750_1008347	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
Ga0103750_1010572	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified ssDNA viruses → Circovirus-like genome RW-C	992	Open in IMG/M
Ga0103750_1011805	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Vannellidae → Vannella → Vannella robusta	946	Open in IMG/M
Ga0103750_1013172	Not Available	902	Open in IMG/M
Ga0103750_1013706	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Chelicerata → Arachnida → Acari → Acariformes → Trombidiformes → Prostigmata → Eupodina → Bdelloidea	888	Open in IMG/M
Ga0103750_1014691	Not Available	863	Open in IMG/M
Ga0103750_1016245	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	828	Open in IMG/M
Ga0103750_1016757	Not Available	817	Open in IMG/M
Ga0103750_1020502	Not Available	751	Open in IMG/M
Ga0103750_1021073	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified ssDNA viruses → Circovirus-like genome RW-C	742	Open in IMG/M
Ga0103750_1021448	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified ssDNA viruses → Circovirus-like genome RW-C	737	Open in IMG/M
Ga0103750_1022279	Not Available	725	Open in IMG/M
Ga0103750_1024143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
Ga0103750_1024957	Not Available	689	Open in IMG/M
Ga0103750_1025964	All Organisms → cellular organisms → Eukaryota → Opisthokonta	678	Open in IMG/M
Ga0103750_1028843	Not Available	646	Open in IMG/M
Ga0103750_1031428	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Vannellidae → Vannella → Vannella robusta	623	Open in IMG/M
Ga0103750_1032294	All Organisms → cellular organisms → Eukaryota	616	Open in IMG/M
Ga0103750_1032534	Not Available	614	Open in IMG/M
Ga0103750_1033353	Not Available	608	Open in IMG/M
Ga0103750_1033361	Not Available	608	Open in IMG/M
Ga0103750_1042376	Not Available	549	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0103750_1003687	Ga0103750_10036872	F091427	MLILGVYYAGISTTISIFNLLSTRRNLSIPGLRNRRILLPFITITVLLMLRALFVITPVLGSTMLMLELDRH*
Ga0103750_1007210	Ga0103750_10072101	F008498	KGSVTYKNQPAINKTKGNVPLAGTSHIYRVQKKLWNDSIEDVLQGLFIGRTLHVCCGKSLLGDVRLDADAENNPDIICDASKMQDFVKDNEFETVICDPPYNGNFQWNHDLLAELSRVASKRIIFQHWFIPANPTGTYKKAQEKFLLSDVLVWQPKTYFGRVQVVSVFDAVS*
Ga0103750_1008347	Ga0103750_10083471	F037503	MPLGAASWLSFEEVELPIGLGGVKSYQIQMNSECFKIYTAVRAWVLRSKSERERTLTNS*
Ga0103750_1010572	Ga0103750_10105721	F052619	LKKVTLQRWGLALLTEVPMATKRNKKSAGSRRTRQDKIPVNSQREIAMRSPVYRPVYKFSRTVTERYDISTDGINPTLVAFVFSLDQLPNYTDFTRLFDMYKIVKIDVQWNPEYTELTDAALVSNAVNVYFNSVIDLTDSSAPSSVDELLQSQQLQQTAITKVHSRKWEPTFLMGGLVPCSCWLPTSSSSERHYAVKVAIPPTGVAMTFRVRAKFSLEFANVN*
Ga0103750_1011805	Ga0103750_10118051	F039594	ITYDLLVEHLHDYILIQPDTHKVSGFELNNWDYDFYYSISPEPQSMRWRVVVTDGQGVLVTVRNHRCPLQATWVKEVWCDAAYYDRPWMCDIEIPTRAAHPGDNAYFVSVYGKNATYSIAFWRGRENCHEFTGAGRNEGLDFCAGLIPYATWRWENYHNLDNEARCFFNELYEHFKCQPCWNGVSLECNATLQAFACYESFKRCDEGGFYTGTCRDSCNAVVYECANWFESVDLEHYNCSSSRYLDSNAGVCTGSSDFSTFNAGTQHFLVEDPDLILFKSSPDSVSSSSAISFSVALSVIALILTLII*
Ga0103750_1013172	Ga0103750_10131721	F007073	KIILVVFGLACAVAALDAVGEGFASTPDQVVNPPNWHGTWTAQGRYGGVMYACPVGERVYGVYSNAGFFIGRINGRELEGTWYEGGRGDRNDWQGAFRITLSADNLEFDGYWHRVTQDGTEYRWNEQRLGAPWPSAPSHEQCLVPYDEELTGTHYTVPGYGREPVSFALCRDRWDQIYGSFGSPDGYVEGWSVDNASGFQGYKYDSNGRSGAFILRNISPTEARGFYWRGRLATQNIATAEEVVLHRTSYISNLEDCERVGPGFLERLRGPTNSAGALSVSLALVAVLFFALF*
Ga0103750_1013706	Ga0103750_10137061	F000606	MKAALALIFFACVAGSMAADARNEMIQQLIQQGQVLAQGVFGQLQQQILALAQQAVGQLSTLFGSFGRFDFNAVLDQFKPLVNQLINQALGGVLGSLSGLIGGRASFDFGAIFNGLFQELSKPLTEMGQHILNQGLAAVLGSFGSRGFADLFAGLQQQIGTAVSAAQGALTGALSNLASLGSSILDASKPHWEQLQEQLIGHGLNALGSISETIGNLHGTITGGR*
Ga0103750_1014691	Ga0103750_10146911	F025295	EIMVSGPGADTELLRRREVPTPDKQKLITRKGNLP*
Ga0103750_1016245	Ga0103750_10162451	F004323	MPPDGLHRLEGRATPAVANLSPVARDYPSRAFSGVFQAVALRL
Ga0103750_1016397	Ga0103750_10163971	F000203	AGPKWGMGVRHALFPVLALGASGAASFPTLFSTASGVFGLVAGPSSASPSLNFE*
Ga0103750_1016757	Ga0103750_10167571	F009934	MRPVTPLAVENSVGKPAANLAPNVGMGKRAWRTPTPTLS
Ga0103750_1016834	Ga0103750_10168342	F000203	KWGMGVRQALFPGLALGAKLAASFPTLFSTASGVIGLVAGPSSSLRALDFE*
Ga0103750_1020502	Ga0103750_10205021	F042865	MSLRVPDYETFLGADDFNKRIWWQFMQSVVNDLPLNGNVAPENIVRANKSCLYIQSTGGTAVLWFNPNGNGSATGWIVK*
Ga0103750_1021073	Ga0103750_10210731	F052619	VNRRARQDKTPVNSQTGILMKCPVYRPVYKFSRNVEARYDISTNGIAAELGAFTFSLDALPSYTDFTNLFDMYRITRIEVCFQPEYTELTDAALVSNAVNCYFNTAIDLVDASPPVNVDDLLQYQQLESTSITKQHVRKWNPTILMGGNIPCSCWLPTSNPSESHYALKYAIPPTGVAMTFRSRVRVHLEFANVN*IFLTPPLIHCLLYCLVNNEN
Ga0103750_1021448	Ga0103750_10214481	F052619	KSAVNRRARQDKTPVNSQTGIVMRCPVYRPVYKFSRVVESVYDIPTNGIAAAVGAFDFRLDVLPAYTDFTSLFDMYRITSIEVCYQPEYTELTDAALVSNAVNVYFNTAIDIADVSAPANVDEVLQYQQLASTPITKQHVRKWTPTILMGGNVPCSCWLPTSNPSERHYALKYGIPPTGVAMTFRSRVRFHLEFANVN*
Ga0103750_1022279	Ga0103750_10222791	F001679	MSWRQEAKKGVEDCDKLGGLVKRELIPRFPNRRGVNS*
Ga0103750_1024143	Ga0103750_10241431	F014467	MKKTTTAVVATIAALALGSSALATMQLQKEYKAKDPKANCASCHTEKMPKKDKADLNDLGKKVKAAKGADGKYDWSKV*
Ga0103750_1024957	Ga0103750_10249571	F014836	VAPRNMRVFLYLALVAIIFGTVECSCPAVQGYCPQEMIYQGCHCFHEWNDANRVGNWTFPENWLQLYEPAWVSFVSIAGDNTVTVDVERRVNELYVGPNRWDTTRLVIDEDLTIVYDDVPVISAVRGYRLPNGVVRLVIQGKGFGFVSDDIQVTVHEYYEIDGDSNVEDREEFVYDCQHVTLTYRDAKIECNIAPTRPMPYTLTVQVAANGMVTDHQFLSKYIE*
Ga0103750_1025964	Ga0103750_10259641	F030999	KMNWSLIILGLVALSSVAIADNSYLIFAPKLFKVGWENQLSVFIASAPQPVEVKYILTVGPKRVEGKITVNAGETRNATLALPSDFPVGPGELIMVATGGLRFEERRDLIVYDNRHVILVQTSASTYRPGDMMDIRVVVTTDELIPVEKGEVLIEIYDAALKLIGRFPQMLIKSGITETVRYPISEHSNIGTWLISATVSNSTSSLEVLVAEPITKAFDLKAIFQ
Ga0103750_1028843	Ga0103750_10288431	F098810	MSVQHRFWWRVVRKYEGDEMWVPILRLAFVHSNGAISLKQGLPHQRKSYRVIQRGLRRYLGLKVSPTRAQQLANEALAHAVFAFYRRALPSNVDRSTVILRLTAVITEGRREKDKTRRVKEKGVHRVADEVHLWLPPKYAGDSADRPNPEPE
Ga0103750_1031428	Ga0103750_10314281	F061786	RMGANNTKGLYYCETIYPPENGISCIPPEKLEKAIKKGLIPPKPADDEEDLDGDMDEIIDKCIKEVWTHYDPKAVGFINKKQTQKFFQDALDLVALRKGVKEKDLFQGRPKGPAFEAAFKKVNTSGDGKVNYEQFEEFINSYDLDEAVALVTGGDTEVSIDTTKVELVDNSSLPAGGGPVKGKIQYRDYSALED*
Ga0103750_1032294	Ga0103750_10322941	F026814	LLVLAFVSAVLASTPLHPRWPASFSTTAIVHFGDRPRPDFTRWFYSKNQNIDRLDGLSEFAGELYFATRFFNHNQQREYAVFYQRDSSVQCYTRAITNPLPQPNFSNFTYIGQALINYVPVYHWAHRRGNDLFQFYDTQDTRQPVRFDAEQRGRPAIQINYSEFDSGSQSPNIFTIPSQILAICTPTQNNNAFSVGF*
Ga0103750_1032534	Ga0103750_10325342	F058934	MRQFSYPNSQFTTILGGASIGWKLNVYNTGTTDKASIYSNLAQTTPTANPVIADADGFLASFYWTGTIDVVLTDENDNIIDSANGIQDLVSTINAVVVAGNISLPYGAASGSGDTITATLPITSDFSDGGMFIVRANAANTGAANTPNLQVNSYASRRIKKIGGVALI
Ga0103750_1033353	Ga0103750_10333531	F051952	MPEFPRQTIAPDHFTTTALSENSWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEEACILFLSFEKMVQKMSQHEAYRAKYGPEIFIFRAVLTGLEDVVSANPLDRLERMREVYGFYQGKLFSRRYYFSVRGQLTRELRLRVLTRFPKKHKPKAFVGKGYGDHGTAKDMAYDGSPSWQEVAMADTN
Ga0103750_1033361	Ga0103750_10333611	F051952	MPKNPRQTIAPDHFTSTALSESSWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRAVLTSLEDVVSANPQDRLIRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLRVLTRFPKKFKPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTN
Ga0103750_1042307	Ga0103750_10423071	F056539	ARMNCKVAIFLLACLSVVSCQLVLLNPPGRGFVGDNARHAPCGITPTTTGNTVAWEQGTVREIEVQILGAGGGGVIEDRYSCVLQGGESNPIEPLFPIEGALKVQVPDWDFQIYRLHVRLPSFVCRGDTTMQLIYSTENGQEYFQCQDIILTYSSSSTLVASLVASIIFVVLVVL*
Ga0103750_1042376	Ga0103750_10423761	F011154	SYPEGIRLLLCISTGGRLGRSPEGDRPNERRRKAGQSERPNREGHAASAGPVKTFREVGGVKNDTADLWTKGNLRVKRRDPWHRANALSQAAAVPALSGEDADPKTQTCLDLVRKPVAQPPVQAS*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300009206: Microbial communities of wastewater sludge from Singapore - Sludge11_b2_February

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences