| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300007589 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0103597 | Gp0123887 | Ga0099766 |
| Sample Name | Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_T0_2 (Metagenome Metatranscriptome) |
| Sequencing Status | Permanent Draft |
| Sequencing Center | DOE Joint Genome Institute (JGI) |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 55390647 |
| Sequencing Scaffolds | 5 |
| Novel Protein Genes | 6 |
| Associated Families | 5 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| Not Available | 5 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria |
| Type | Engineered |
| Taxonomy | Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Austria: Klosterneuburg | |||||||
| Coordinates | Lat. (o) | 48.3 | Long. (o) | 16.2 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F001758 | Metagenome / Metatranscriptome | 640 | Y |
| F025291 | Metagenome / Metatranscriptome | 202 | N |
| F051952 | Metatranscriptome | 143 | N |
| F059886 | Metagenome / Metatranscriptome | 133 | Y |
| F070166 | Metatranscriptome | 123 | N |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| Ga0099766_1013033 | Not Available | 1095 | Open in IMG/M |
| Ga0099766_1025686 | Not Available | 875 | Open in IMG/M |
| Ga0099766_1028301 | Not Available | 767 | Open in IMG/M |
| Ga0099766_1030288 | Not Available | 546 | Open in IMG/M |
| Ga0099766_1170325 | Not Available | 759 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| Ga0099766_1013033 | Ga0099766_10130332 | F070166 | RTKRITLQRFLVSKIAYGKDFSLTELAALFHNQLWLQVKCETDIHFKEKFGSSLEDLAKILKECNFSRGLQPGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGIEINKLPPKSFIGKGYRDHGTAPSPEIDGTPSWQEVGSEFSNLEREHTEAFLFLLKVIDNDPNVSIQERLQGLKRAIEVAERIKRIHPNWRNSQITEASKGRIIDAKKVKKVIP* |
| Ga0099766_1025686 | Ga0099766_10256861 | F051952 | MPKFPRQTIAPDHFTTTALSENSWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGPEVFTFRAVFTSLEDVVSANPQDRLNRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKDMAYDGSPSWQEVAMADTNLGTSDTSKTDYLEFLFRNFNTNRVQLFPQKKPGEKLHSSSN* |
| Ga0099766_1028301 | Ga0099766_10283011 | F059886 | VIYASRTAFADLRGERHQLSPTIPRSPGIIPAVLSVAPFRPLRFDCS |
| Ga0099766_1030288 | Ga0099766_10302881 | F051952 | WRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRAVFTSLEDVVSANPQDRLIRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKEMAFDGSPSWQEVAMADTNLGTSDTSRFDYLEFLFR |
| Ga0099766_1170325 | Ga0099766_11703251 | F025291 | QPNQRRKQVTNGKTKHHMVNLQREINIFRESAWRVITYNYHLGDHSSTGLYTLNVGADQRYMSFQTLLTTDEFQNMSIVYNEFKIHKAVFTSLPTTNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSARIFAPKATTAQSCEWNLKGLGPNFGIWLDTGATIPGQFQIGNYIFGSIPMNLGWEVKFQLVVEFTNPK* |
| Ga0099766_1177572 | Ga0099766_11775721 | F001758 | GWRGPSQAGAQVPGAEAGFTSSSGTFARVSYAKKELGDQERLETVPSRIK* |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |