NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300007322

3300007322: Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_D6L_HD (Metagenome Metatranscriptome)



Overview

Basic Information
IMG/M Taxon OID3300007322 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0103597 | Gp0123884 | Ga0099790
Sample NameActive sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_D6L_HD (Metagenome Metatranscriptome)
Sequencing StatusPermanent Draft
Sequencing CenterDOE Joint Genome Institute (JGI)
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size117978073
Sequencing Scaffolds8
Novel Protein Genes9
Associated Families6

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
Not Available6
All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameActive Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria
TypeEngineered
TaxonomyEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria

Alternative Ecosystem Assignments
Environment Ontology (ENVO)Unclassified
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Water (non-saline)

Location Information
LocationAustria: Klosterneuburg
CoordinatesLat. (o)48.3Long. (o)16.2Alt. (m)N/ADepth (m)N/A
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F002779Metagenome / Metatranscriptome530Y
F025291Metagenome / Metatranscriptome202N
F052619Metagenome / Metatranscriptome142Y
F061655Metagenome / Metatranscriptome131Y
F070166Metatranscriptome123N
F091427Metagenome / Metatranscriptome107Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
Ga0099790_1118575Not Available949Open in IMG/M
Ga0099790_1119002Not Available949Open in IMG/M
Ga0099790_1241908All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage1280Open in IMG/M
Ga0099790_1258797Not Available919Open in IMG/M
Ga0099790_1279902Not Available788Open in IMG/M
Ga0099790_1283479Not Available760Open in IMG/M
Ga0099790_1302434All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora889Open in IMG/M
Ga0099790_1326930Not Available1225Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
Ga0099790_1118575Ga0099790_11185751F070166MNLDNYIVQIHRRTKRITLQRFLVSKIAYGKDFSLTELAALFHNQLWLQVKCETDVHFKEKFGGTLEALAKILKECNFSRGLQPGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGIEISKLPPKSFIGKGYRDHGTAPSPEIDGSPSWQEVGSEFSNLEREHTEAFLFLLKVIDNDPNVSIQERL
Ga0099790_1119002Ga0099790_11190021F070166MNLDNYIVQIHRRTKRITLQRFLVSKIAYGKDFSLIELAALFHNQLWLQVKCETDIHFKEKFGGTLEVLAKILKECNFSRGLQPGTISRMKTKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGIEINKLPPKSFIGKGYRDHGTAPSPEIDGTPSWQEVGSEFSNLEREHTEAFLFLLKVIDNDPNVSIQERL
Ga0099790_1234863Ga0099790_12348631F061655LKVIDTLKLMFSEYEVSPESSLRVQPASYEVATGEKVEYPLFRNKAGTFYGSKAYLNTENWNLTLKPLPAGTRGVGAFLQFSVPKNYYGSNYFSVGEAGTRAALKKVEGELD*
Ga0099790_1241908Ga0099790_12419081F002779PNKNMKNLKLELFNFKQSLDFDRSDIAYIVEGHMNACNDLSEKTIIFSLNEKLKSFTYDDDVNTLLEGLNDDMSKYQLLYELKNLYSVLNSKNQGELYRQPINVLLQTINLDTDEDRMSKVLNELAIYDWVPEIKLFVYNLTKSPEQRSNLLSGGKSEVVYTIVEQVEDGHLAYIKDSWFLLTDDSIEKTLLENHVKDDNRMKTLRSLQTAMQFATINESRIDFRISEYLTIGLSVNDSTIFINEDELSEDTSLENLFSSPIVPIVNRNFYPLLVEVSNNIDSFVELDVVKRVSNLISPTLEVFAFNYKKNTFIYRCDERYGNSFFKYESALELVNEVRNELNYDLTFFYDNKLSKEIVAKKQLEDKERQITLKLEDVNFNISKLNGSVKVLGSTDVLTEALSNLEKRRDLLVDDLRAVKEVQDKE
Ga0099790_1258797Ga0099790_12587971F052619SSFTMNTPVYRPVHKFSRTVEGAYDIICDGITPSLSGLIFQLSSLPSFTDFTNLFDMYRITKIEIDWVPEYTELTDAALVSNAVNVRFNSVVDISDAAAPLAVNDLLQYETVKSTSITKGHSRSWKPCFLMNALVPCSCWLPTSAPNERHYAIKVAVPPTGVAMTFRSRVKFFVECANVN
Ga0099790_1279902Ga0099790_12799021F025291RKQPNQRRKQVTNGKTKHHMVNLQREINIFRESAWRVITYNYHLGDHSSTGLYTLNVGADQRYMSFQTLLTTDEFQNMSVVYNEYKIHKAVFTSLPTTNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSARIFAPKALTAQSCEWNLKGLGPNFGIWLDTGATIPGQFQIGNYIFGSIPMNLGWEVKFQLVVEFTNPK*
Ga0099790_1283479Ga0099790_12834791F025291GKNKHHMVNLYKEINIFRDRAWRVITYNYHLGDHSSTGLYTLNVGADQRYMTFQTVLTTDEFQNMAIVYNEFKIHKAVFTSLPTTNSNRLPYLYVDIEPTTSAGVNPNNVRVCADDSARIFAPKALSAQSCEWNLKGIGTHFNVWIDTGSVSGLPGQFQIGNYIFGSIPVNLGWEVKFQLVVEFTNPK*
Ga0099790_1302434Ga0099790_13024342F091427MLILGVYYAGISTTISVFNLLATRRNLAIPGLRNRRILLPFVSISILLMLRALFVITPVLGSAMLMLILDRH*
Ga0099790_1326930Ga0099790_13269301F070166MNLNNYIVQIHRRSKRITLQRFLVSKIAYGKDFSLIELAALFHNQLWLQVKCETDVHFKEKFGVSLEEIAKILKECNFSRGLQPGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGVEINKLPPKSFIGKGYRDHGTAPSPEKDGSPSWQEVGSEFSNLEREHTENLLFLLKVIDNEPNISNQEKLQGLRRSLEIKARIERIDPNWRNSQITEASKGRIVDAKSIKQVKP*
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