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Sample 3300007282
3300007282: Activated sludge microbial communities from bioreactor with dissolved oxygen in CSIR-NEERI, Nagpur, India ? 4ppm of oxygen, sample C
Overview
| Basic Information |
| IMG/M Taxon OID | 3300007282 Open in IMG/M |
GOLD Reference
(Study | Sequencing Project | Analysis Project) | Gs0118053 | Gp0127447 | Ga0104350 |
| Sample Name | Activated sludge microbial communities from bioreactor with dissolved oxygen in CSIR-NEERI, Nagpur, India ? 4ppm of oxygen, sample C |
| Sequencing Status | Permanent Draft |
| Sequencing Center | Xcelris labs Ltd |
| Published? | N |
| Use Policy | Open |
| Dataset Contents |
| Total Genome Size | 79695739 |
| Sequencing Scaffolds | 2 |
| Novel Protein Genes | 2 |
| Associated Families | 2 |
| Dataset Phylogeny |
| Taxonomy Groups | Number of Scaffolds |
|---|
| All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium Pan216 | 1 |
| Not Available | 1 |
Ecosystem and Geography
| Ecosystem Assignment (GOLD) |
| Name | Activated Sludge Process Metagenomes |
| Type | Engineered |
| Taxonomy | Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Aeration Tank Of Activated Sludge Process → Activated Sludge Process Metagenomes |
| Alternative Ecosystem Assignments |
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
| Location Information |
| Location | Nagpur, India |
| Coordinates | Lat. (o) | 21.1458004 | Long. (o) | 79.0881546 | Alt. (m) | N/A | Depth (m) | N/A |
Location on Map |
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Associated Families
| Family | Category | Number of Sequences | 3D Structure? |
|---|
| F049640 | Metagenome / Metatranscriptome | 146 | Y |
| F104576 | Metagenome / Metatranscriptome | 100 | Y |
Sequences
| Scaffold ID | Protein ID | Family | Sequence |
|---|
| Ga0104350_1048445 | Ga0104350_10484452 | F049640 | MEPRKIIVELLPHERAALLRGNFTSGEVREQLEASASSPHIKPITYTATDVNFLAGDLNHAIVKRGCRDADIIDLSARFDYVHDTINGSLDPWH* |
| Ga0104350_1088709 | Ga0104350_10887092 | F104576 | VLVDIEKCIDANRELAYDTGKETTEIDIVSIVTDEGLLKPFGVGEVTLQVRYQVL* |
