NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Sample 3300001768

3300001768: Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Deep Background Supr62



Overview

Basic Information
IMG/M Taxon OID3300001768 Open in IMG/M
GOLD Reference
(Study | Sequencing Project | Analysis Project)		Gs0094242 | Gp0056360 | Ga0012998
Sample NameHydrothermal vent plume microbial communities from the Mid Cayman Rise - Deep Background Supr62
Sequencing StatusPermanent Draft
Sequencing Center
Published?N
Use PolicyOpen

Dataset Contents
Total Genome Size116341812
Sequencing Scaffolds25
Novel Protein Genes28
Associated Families26

Dataset Phylogeny
Taxonomy GroupsNumber of Scaffolds
All Organisms → cellular organisms → Bacteria3
Not Available13
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium1
All Organisms → cellular organisms → Bacteria → Proteobacteria1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium AD-802-F09_MRT_200m1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium Pan2161
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium1
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon2

Ecosystem and Geography

Ecosystem Assignment (GOLD)
NameHydrothermal Vent Plume Microbial Communities From The Cayman Rise, Cayman Islands
TypeEnvironmental
TaxonomyEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume → Hydrothermal Vent Plume Microbial Communities From The Cayman Rise, Cayman Islands

Alternative Ecosystem Assignments
Environment Ontology (ENVO)marine hydrothermal vent biome → marine hydrothermal plume → hydrothermal fluid
Earth Microbiome Project Ontology (EMPO)Free-living → Non-saline → Subsurface (non-saline)

Location Information
LocationDeep Background, Mid Cayman Rise
CoordinatesLat. (o)18.35Long. (o)-81.85Alt. (m)N/ADepth (m)4000
Location on Map
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Associated Families

FamilyCategoryNumber of Sequences3D Structure?
F001651Metagenome / Metatranscriptome657Y
F002030Metagenome601Y
F002745Metagenome533Y
F005883Metagenome / Metatranscriptome387Y
F006640Metagenome / Metatranscriptome368Y
F007053Metagenome / Metatranscriptome359Y
F007771Metagenome / Metatranscriptome345Y
F015147Metagenome / Metatranscriptome257Y
F015945Metagenome / Metatranscriptome251Y
F020787Metagenome / Metatranscriptome222N
F027865Metagenome193Y
F034336Metagenome / Metatranscriptome175N
F042379Metagenome / Metatranscriptome158Y
F049640Metagenome / Metatranscriptome146Y
F053395Metagenome141Y
F054932Metagenome / Metatranscriptome139N
F058220Metagenome / Metatranscriptome135N
F062154Metagenome / Metatranscriptome131N
F065861Metagenome / Metatranscriptome127Y
F071317Metagenome / Metatranscriptome122N
F076171Metagenome118N
F077389Metagenome / Metatranscriptome117Y
F078613Metagenome / Metatranscriptome116N
F085813Metagenome111N
F095626Metagenome / Metatranscriptome105N
F096028Metagenome105Y

Associated Scaffolds

ScaffoldTaxonomyLengthIMG/M Link
supr62_1002341All Organisms → cellular organisms → Bacteria5913Open in IMG/M
supr62_1003740Not Available3967Open in IMG/M
supr62_1003824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis3901Open in IMG/M
supr62_1004143Not Available3615Open in IMG/M
supr62_1004313All Organisms → cellular organisms → Bacteria3801Open in IMG/M
supr62_1005641Not Available3149Open in IMG/M
supr62_1006650All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium2441Open in IMG/M
supr62_1009798All Organisms → cellular organisms → Bacteria → Proteobacteria2449Open in IMG/M
supr62_1011087Not Available1636Open in IMG/M
supr62_1012612Not Available1479Open in IMG/M
supr62_1013001Not Available1745Open in IMG/M
supr62_1013954All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1368Open in IMG/M
supr62_1019814Not Available1027Open in IMG/M
supr62_1020059Not Available1017Open in IMG/M
supr62_1022485Not Available924Open in IMG/M
supr62_1023085Not Available905Open in IMG/M
supr62_1025448All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium AD-802-F09_MRT_200m836Open in IMG/M
supr62_1025764All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium Pan216828Open in IMG/M
supr62_1026302All Organisms → cellular organisms → Bacteria814Open in IMG/M
supr62_1027655Not Available782Open in IMG/M
supr62_1027862All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium776Open in IMG/M
supr62_1028238All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon767Open in IMG/M
supr62_1030359Not Available721Open in IMG/M
supr62_1039155All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon565Open in IMG/M
supr62_1042502Not Available515Open in IMG/M

Sequences

Scaffold IDProtein IDFamilySequence
supr62_1002341supr62_10023418F001651LPKGHSKWMTIGGKPIPEGSYIVPLQNGKKIALAQRRHRVIQAKIEGRSEAQIAEQEGVVQYTIWKDIRAYLGEVRREDKAAVQAEYDLQRARYERLLLRWWDHAIGEDSDHAARATGIVLDILRRLDTIGGLIPEKPLIQLQQKNVMVGGVTFADLLREAMDGAGA*
supr62_1003740supr62_10037405F096028SHITISVDFRVDWASFELIDGDFHSHSFGGIVKRNDSMLEEN*
supr62_1003824supr62_10038242F058220MQIFVDCDDTLILYDSHTGVHPYGVLNGEPWRPNQPLVDALLETEQPVFVWSGGGAWYAGIIAGKLGLDFPCLDKDETTFEVIQEGDVVIDDQDLGGRRTHNPFEWPETKGRLNPNQL*
supr62_1004143supr62_10041432F065861MGIIIVIRRKISLIYRENSFIFAVPLRVVLYRIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLNCLT*
supr62_1004313supr62_10043131F071317MLKKITAVGLITLFAVTAAPLIHLDECNMPCCAGLATSCCDMDQEVACPTISDCGSSIFVLIVLGPFHKSELKSSDSISQRFVTDLDIFKIETNYVTSFGNYDPGPMASLNLPLLI*
supr62_1005641supr62_10056412F085813MDQFEIIWILATVIGALNYGLNAYQKGFRRLLKWDVIFLIILNTLMFVPLSLIVGVR*
supr62_1006650supr62_10066502F062154MQSRRNAVDANGVKVLSVVNARPEQPVNSVANGVRAPSVVNARPERLVNRVVNGVRVPSVVNVRPEQAVSVVRVDHSSVAAVVREAQVVFCGCSQ*
supr62_1009798supr62_10097983F042379MEMKELTFAPGWVQTIDPATESQDLLSYISDTHKSVYGFRPRGWETGSWSKRLEADVHASIARARAEEAYRQSEMAAHHIAVSTAKKPVARTFKPFANLKELLV*
supr62_1011087supr62_10110872F002030MIGFLIFGLVVLSTVCLWLLIEERKSWKFLVWFIPVFLVLVTSTYVTYTSILGFPKVGIPEKGLYLRHYIDEPNWIYLWVLSKKNVPMSYQLVYSREKHNALEGVKGQAAEGAFMVLGEDESLGPGDGEGDQKGGRSGEGYTIGGDISFYKWDFTDNMPPKNTQE*
supr62_1012612supr62_10126123F095626LVLGRTTNAQPILLSIIYDLNMDLQRRLKRLRCTAFPYFLDTISPISILELLLYLNDKSLKYRDFEAFIILENPDEESEYFN*
supr62_1013001supr62_10130011F071317VTAAPLIHLDECNMPCCAGLATSCCDMDQEIPCPTMSDCGSSIFVVIVSGPFHKSEAKSSDSISRRFVTDLDIINIETNYVTSFGKYDPGPITFLNLPLLI*
supr62_1013954supr62_10139543F006640MIEVLVFGLVALSTICLWLLIEGRKSPKFLIWFIPLLLILVSSTYVTYTSILGFPRVTTPSKGLYLKHYIDEPYWIYLWIL
supr62_1016466supr62_10164662F020787MPKVRFEIYSTERGKKLIDLGELLVESGYLQSFVLDEEGTEVVFNFEVNAGFDVEKGETDMEELRSYFDAADDIGKKFTDELLRSVFDLDDTGHIWKS*
supr62_1019814supr62_10198141F005883MNVRKKVKNPGTSGIRFRRGQQIVLENEKSTEHVAVKVVLYDSLQGWLAENADGDYQWYREHKQEHDAKETDYWKYIKKVGT*
supr62_1020059supr62_10200591F034336MKINVKVLSAFLLIVNLYAVENPEDVKPTIQNGKGLFVLLDDTSWISQIVAEAYILGTIDGIITRKRPLRALCGNKVDKALLTIPNGIEIERIISIVHQFIKDNPENLYKPSIALIRQSLLRAFDQYDIAGY*LSYVKIIQTVNSPNFQNI
supr62_1022485supr62_10224852F078613MEYSDWIESPKSARVWLEDSMTTLCQFAYVTPLHKVMHWDDINKRRTLCYQGKYEKCTTCDRGIPQIHDYTYGIYTSSGDKSIRYLSTALSSHTNFQTIFRDYLKANTNPCDLLFQIRKGDIVTPKGYETKGYDIEVMEDEPFVAEADRPSPFQEGKWVIPRMVAEALLDIDGHPMNLLDLYTEMKERFPNIEDRDIKEYAILLGEGGVVDLRNAKEKEWAI*
supr62_1023085supr62_10230851F002745LTEFAIQSTSDYVFNAGSDSSALKIPISGPMFKRIWPDTIRTTVFHATDLKGLANLKKLEGGKKSISAFFSMMSRYMETGVATEGGGIVAEMDADVLVSARDDIMSEVDKQGRRWVMMSWFEYQTRERSKFSKVEKDLNTLIANLVKKHIPKDKEIQQTKHFGKDAGAVFEIWGNMKKHLKGDGRKIAAVIKDYFDGVEKIIKKNKEVMGDIFYGYTKSKRMTDNSWDEQIVNNIDIYKIHVIKPHPSSDVWGPDEIKQHITDVHKWPMKVWDVAIDLEIYTREVVNAEIRTMGGWSKK*
supr62_1025448supr62_10254482F058220MQIFVDCDDTLVLYDSHTGVHPYGVRHGEPWHPNQPLVDSLLETEHPVFVWSGGGAWYAEIVAGKLGLDFPCLDKDETAFELIQEGDVVIDDQDLGGRRTHNPFEWPETKGRLNPDRL*
supr62_1025764supr62_10257641F049640MDRNIQLELLPHERDALLKWNFTSEVRRQLEAYASSDDAETIVIDATDLRWLASDLTHAIVKGGCRDADVIDLSERLD
supr62_1026302supr62_10263022F076171SAKIDSSQFFRVINGFQKPGFGFFEKLAIAFPDLNLSWLLIGEGEMILDRVNDAEKTILENYRKLPDEGKIGFEVRTNLYEREYLEHKELMGNIVDVAMNNENKLPFMSWELYNCLQVLQNSRVNKIISIQKKPSKMAVFDTSELKSQLKSQLENTEADIQKLISLDAEYIKEFFTNTNE
supr62_1027655supr62_10276552F007771METIIHAKNIDKKVRLALYGMLHHSATKLFPRRMKYVSIKLHLKHYVYDGVAMIEEDTKITNPRNFKIIIDPYRLEKDDWGRERNYSEWVSELLRALAHEMVHVKQYIMGELTFKKGQMCWKKQKVDFKSEDNYYRSPHEVEAYGLEKWLQLGYTATWNKIESGEI*
supr62_1027767supr62_10277673F053395VVKVRLHSTAAASRLPALLLGHILPVFSLVASYQTGASPVSVPRRTFTTDC*
supr62_1027862supr62_10278622F015945MMPDTPTEAEIAGHFSAMDDSVTLIHATIADDTDALKMMDAAEVKLMVTRNTDHLEIQSAKDWYSESSNSKTPYTEAVTAGKAYVAE*
supr62_1028238supr62_10282383F077389MKNYKEAMIRYYYVPIIGFLLVLAIVCGFVIGFDEVWRYWRVVGLNLL*
supr62_1030359supr62_10303591F027865YLKITLNSMDLYDMKFCKLTRKFEEKSVTEYKNVYNDLKRGTFTAHTGMYTSLF*
supr62_1038865supr62_10388651F054932LHARAAVKAGATLAQVLQVIQYIELTGMVKWVMVGHDALTAAEAEVPEAQRVDATRDAWNGQEQRFQDIQQYLQRDGHGEISAQWQKLAEVAPAILDGYITMRENFVKPDPLGAVPKKLMELAIIAADIIQSHPWGAVRHTHRYISDGGTVPELLEAVALAMIEDGVQCYKACGLDVIEAAESA*
supr62_1039155supr62_10391553F015147LYLTFNPNCETIIPVMRDINKLKWLIEDLGLNELDAWLWMIGGAALTAAVLVLLTGEGPEVYRYWRVFFLNLM*
supr62_1042502supr62_10425022F007053MANSIINSNQRSVLHIDTTDGAITLAELKATGEATPTKAHIVDIYWQTAGSLTIDRGGTAVHAFTGTGHWNLSQSGCELGGTQTADIGLTVSGDTYAIIVVHKSYELV*
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