Sample 3300001763

Overview

Basic Information
IMG/M Taxon OID	3300001763 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0094242 \| Gp0056764 \| Ga0012996
Sample Name	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Beebe Supr51
Sequencing Status	Permanent Draft
Sequencing Center
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	76082151
Sequencing Scaffolds	17
Novel Protein Genes	17
Associated Families	14

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	3
Not Available	9
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2
All Organisms → cellular organisms → Archaea	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium → Corynebacterium mastitidis	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Hydrothermal Vent Plume Microbial Communities From The Cayman Rise, Cayman Islands
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume → Hydrothermal Vent Plume Microbial Communities From The Cayman Rise, Cayman Islands

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine hydrothermal vent biome → marine hydrothermal plume → hydrothermal fluid
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline)

Location Information
Location	Beebe Vents, Mid Cayman Rise
Coordinates	Lat. (^o)	18.35	Long. (^o)	-81.85	Alt. (m)	N/A	Depth (m)	4000
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F001651	Metagenome / Metatranscriptome	657	Y
F009892	Metagenome / Metatranscriptome	311	Y
F012464	Metagenome / Metatranscriptome	280	Y
F032684	Metagenome / Metatranscriptome	179	Y
F034189	Metagenome / Metatranscriptome	175	Y
F041257	Metagenome / Metatranscriptome	160	N
F052659	Metagenome / Metatranscriptome	142	N
F057445	Metagenome / Metatranscriptome	136	N
F058220	Metagenome / Metatranscriptome	135	N
F063069	Metagenome	130	Y
F076171	Metagenome	118	N
F089023	Metagenome	109	Y
F096028	Metagenome	105	Y
F101330	Metagenome / Metatranscriptome	102	N

Family

Category

Number of Sequences

3D Structure?

F001651

Metagenome / Metatranscriptome

657

F009892

Metagenome / Metatranscriptome

311

F012464

Metagenome / Metatranscriptome

280

F032684

Metagenome / Metatranscriptome

179

F034189

Metagenome / Metatranscriptome

175

F041257

Metagenome / Metatranscriptome

160

F052659

Metagenome / Metatranscriptome

142

F057445

Metagenome / Metatranscriptome

136

F058220

Metagenome / Metatranscriptome

135

F063069

Metagenome

130

F076171

Metagenome

118

F089023

Metagenome

109

F096028

Metagenome

105

F101330

Metagenome / Metatranscriptome

102

Scaffold	Taxonomy	Length	IMG/M Link
supr51_1000210	All Organisms → cellular organisms → Bacteria	21512	Open in IMG/M
supr51_1000258	Not Available	34734	Open in IMG/M
supr51_1000933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	6746	Open in IMG/M
supr51_1001159	All Organisms → cellular organisms → Bacteria	5892	Open in IMG/M
supr51_1002132	Not Available	3959	Open in IMG/M
supr51_1006063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1993	Open in IMG/M
supr51_1007571	All Organisms → cellular organisms → Archaea	1721	Open in IMG/M
supr51_1008795	Not Available	1556	Open in IMG/M
supr51_1012359	Not Available	1231	Open in IMG/M
supr51_1013353	Not Available	1168	Open in IMG/M
supr51_1013426	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
supr51_1016852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	991	Open in IMG/M
supr51_1020777	Not Available	853	Open in IMG/M
supr51_1023799	Not Available	774	Open in IMG/M
supr51_1029539	Not Available	659	Open in IMG/M
supr51_1031719	Not Available	622	Open in IMG/M
supr51_1040105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium → Corynebacterium mastitidis	500	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

supr51_1000210

All Organisms → cellular organisms → Bacteria

21512

Open in IMG/M

supr51_1000258

Not Available

34734

Open in IMG/M

supr51_1000933

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique

6746

Open in IMG/M

supr51_1001159

All Organisms → cellular organisms → Bacteria

5892

Open in IMG/M

supr51_1002132

Not Available

3959

Open in IMG/M

supr51_1006063

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique

1993

Open in IMG/M

supr51_1007571

All Organisms → cellular organisms → Archaea

1721

Open in IMG/M

supr51_1008795

Not Available

1556

Open in IMG/M

supr51_1012359

Not Available

1231

Open in IMG/M

supr51_1013353

Not Available

1168

Open in IMG/M

supr51_1013426

All Organisms → cellular organisms → Bacteria

1163

Open in IMG/M

supr51_1016852

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium

991

Open in IMG/M

supr51_1020777

Not Available

853

Open in IMG/M

supr51_1023799

Not Available

774

Open in IMG/M

supr51_1029539

Not Available

659

Open in IMG/M

supr51_1031719

Not Available

622

Open in IMG/M

supr51_1040105

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium → Corynebacterium mastitidis

500

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
supr51_1000210	supr51_10002104	F057445	LSKAAVNEILPKAVSLILIKERLENKRKKDFLDLSDLFSVAPDVIKIM*
supr51_1000258	supr51_10002583	F052659	MLLSGNPGTETRSAVFIDGRLISSLPELNYQSIDKLQQGGVPDKVSWMKPSLRGRLRLVKLQAQERNLTIEDLNQSIRSKWVFLWAEV*
supr51_1000933	supr51_10009338	F032684	MILLCTLRVLALIDKFKSNFSVFKVMFLPFGIITKNTLKNIIQPKITPTDKNANLDPKNFVKQNEITAPIMSSTTIKIILLFINLD
supr51_1001159	supr51_10011597	F001651	LPKGHSKWMTIGGKPIPEGGYIVPLQNGKKIALAQRRHRVIQAKIEGRSEAQIAEQEGVVQYTIWKDIRAYLGEVRREDKAAVQAEYDLQRARYERLLLRWWDHAIGEDSDHAARATGIVLDILRRLDTIGGLIPEKPLIQLQQQNVMVGGVTFADLLREAMDGAGA*
supr51_1002132	supr51_10021325	F096028	VSHITISVDFRVDWASFELIDGDFHSHSFGGSVKGNDSMLEEN*
supr51_1006063	supr51_10060634	F063069	LKLNKPIKKLWPILEKKVKTNPKIIILKLDLTISIIIL*
supr51_1007571	supr51_10075712	F089023	VQPYAIGSVSLGSAEEPYDSDMTHSYRLTEGRLIRYPVIQW*
supr51_1008795	supr51_10087951	F096028	VSHITISVDFRVDWASFELIDGDFHSHSFGESVKRNDSMLEEN*
supr51_1012359	supr51_10123591	F101330	MWLQNNYTVSFCGFIGVCIGYFTGHKEICIMIGVGIGILIRIVQSKSK*
supr51_1013353	supr51_10133532	F012464	LGARQSATAVTSPVDDTVGTDALDVAHVTVGLAIVLLFASFTVGTSVVVSPHDVKLRLVGASVTLDTT*
supr51_1013426	supr51_10134261	F034189	RIMTKLVKWASNDGQIIKSGLSDGRRAKFLPSVVGFAYDWLRIEGHLGNVG*
supr51_1016852	supr51_10168522	F058220	MQIFVDCDDTLVLYDSHTGIHPYGSHTAIHPYGVRHGEPWRPNQPLVDALLETEHPVFVWSGGGAWYAEIVAGKLGLDFPCLDKDETAFELIQEGDVVIDDQDLGGRRTHNPFEWPETKGRLNPDQL*
supr51_1020777	supr51_10207773	F009892	TRSQFLTKLEQNGISLDESRMHEVNYYFNLWCDTQKQSGKGAMDESGFPAFITWMKKQ*
supr51_1023799	supr51_10237992	F012464	VSSPTVTEADPLAEPDVAMIEIDPVATEVTNPADETVATAGFVDDHVTVAPGIVAPSASVTVGVSVAVSANEENERLVGDSVTEDAT*
supr51_1029539	supr51_10295392	F076171	FFEKLAIAFPDLNVSWFLTGEGEMFTENLDYAEKTILENYRKLPDEGKIGFEVRTNLYEREYLEHKELMGNIVDVAMNNENKLPFMSWELYNCLQVLQNSRVNKIISIQKKPSKMAVFDTSELKSQLKSQLENTEADIQKLISLDAEYIKEFLT*
supr51_1031719	supr51_10317191	F041257	PSGSEEGDVVDPRSEQPEGPFDHERFQTLTVLAHVAGQVMDRYAIKGFEGFTNRQANWACKLQSFFNLSNPFETLVLLLFTFQFSQNERFDLEMGKTEPIDRSHPLSQALMAWVWWDPSSETSRVDRFYPWEYGEERTSRMVAIASGLLPEPIDVTSPGDIPPSPPGTQ*
supr51_1040105	supr51_10401051	F041257	VIDPWSEVTDGLFDHGRIKTLTVLAHVAGQVMDRYSIKGFEGFTKRQADWACKLQEFFNLSNQSEALVQLLFTFQFSQKERFELEMRKSTTVDRSDPLSKALMAWVWWDPGSETSREDRFYPWEYGEEQTSRMVAIASGLLPEPIDITPVPGERTKVPPLDPQISP

Scaffold ID

Protein ID

Family

Sequence

supr51_1000210

supr51_10002104

F057445

LSKAAVNEILPKAVSLILIKERLENKRKKDFLDLSDLFSVAPDVIKIM*

supr51_1000258

supr51_10002583

F052659

MLLSGNPGTETRSAVFIDGRLISSLPELNYQSIDKLQQGGVPDKVSWMKPSLRGRLRLVKLQAQERNLTIEDLNQSIRSKWVFLWAEV*

supr51_1000933

supr51_10009338

F032684

MILLCTLRVLALIDKFKSNFSVFKVMFLPFGIITKNTLKNIIQPKITPTDKNANLDPKNFVKQNEITAPIMSSTTIKIILLFINLD

supr51_1001159

supr51_10011597

F001651

LPKGHSKWMTIGGKPIPEGGYIVPLQNGKKIALAQRRHRVIQAKIEGRSEAQIAEQEGVVQYTIWKDIRAYLGEVRREDKAAVQAEYDLQRARYERLLLRWWDHAIGEDSDHAARATGIVLDILRRLDTIGGLIPEKPLIQLQQQNVMVGGVTFADLLREAMDGAGA*

supr51_1002132

supr51_10021325

F096028

VSHITISVDFRVDWASFELIDGDFHSHSFGGSVKGNDSMLEEN*

supr51_1006063

supr51_10060634

F063069

LKLNKPIKKLWPILEKKVKTNPKIIILKLDLTISIIIL*

supr51_1007571

supr51_10075712

F089023

VQPYAIGSVSLGSAEEPYDSDMTHSYRLTEGRLIRYPVIQW*

supr51_1008795

supr51_10087951

F096028

VSHITISVDFRVDWASFELIDGDFHSHSFGESVKRNDSMLEEN*

supr51_1012359

supr51_10123591

F101330

MWLQNNYTVSFCGFIGVCIGYFTGHKEICIMIGVGIGILIRIVQSKSK*

supr51_1013353

supr51_10133532

F012464

LGARQSATAVTSPVDDTVGTDALDVAHVTVGLAIVLLFASFTVGTSVVVSPHDVKLRLVGASVTLDTT*

supr51_1013426

supr51_10134261

F034189

RIMTKLVKWASNDGQIIKSGLSDGRRAKFLPSVVGFAYDWLRIEGHLGNVG*

supr51_1016852

supr51_10168522

F058220

MQIFVDCDDTLVLYDSHTGIHPYGSHTAIHPYGVRHGEPWRPNQPLVDALLETEHPVFVWSGGGAWYAEIVAGKLGLDFPCLDKDETAFELIQEGDVVIDDQDLGGRRTHNPFEWPETKGRLNPDQL*

supr51_1020777

supr51_10207773

F009892

TRSQFLTKLEQNGISLDESRMHEVNYYFNLWCDTQKQSGKGAMDESGFPAFITWMKKQ*

supr51_1023799

supr51_10237992

F012464

VSSPTVTEADPLAEPDVAMIEIDPVATEVTNPADETVATAGFVDDHVTVAPGIVAPSASVTVGVSVAVSANEENERLVGDSVTEDAT*

supr51_1029539

supr51_10295392

F076171

FFEKLAIAFPDLNVSWFLTGEGEMFTENLDYAEKTILENYRKLPDEGKIGFEVRTNLYEREYLEHKELMGNIVDVAMNNENKLPFMSWELYNCLQVLQNSRVNKIISIQKKPSKMAVFDTSELKSQLKSQLENTEADIQKLISLDAEYIKEFLT*

supr51_1031719

supr51_10317191

F041257

PSGSEEGDVVDPRSEQPEGPFDHERFQTLTVLAHVAGQVMDRYAIKGFEGFTNRQANWACKLQSFFNLSNPFETLVLLLFTFQFSQNERFDLEMGKTEPIDRSHPLSQALMAWVWWDPSSETSRVDRFYPWEYGEERTSRMVAIASGLLPEPIDVTSPGDIPPSPPGTQ*

supr51_1040105

supr51_10401051

F041257

VIDPWSEVTDGLFDHGRIKTLTVLAHVAGQVMDRYSIKGFEGFTKRQADWACKLQEFFNLSNQSEALVQLLFTFQFSQKERFELEMRKSTTVDRSDPLSKALMAWVWWDPGSETSREDRFYPWEYGEEQTSRMVAIASGLLPEPIDITPVPGERTKVPPLDPQISP

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300001763: Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Beebe Supr51

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences