| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300001758 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0099419 | Gp0055290 | Ga0013003 |
| Sample Name | M4 |
| Sequencing Status | Permanent Draft |
| Sequencing Center | |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 27991882 |
| Sequencing Scaffolds | 8 |
| Novel Protein Genes | 8 |
| Associated Families | 8 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| Not Available | 2 |
| All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009 | 1 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 1 |
| Methanogenium → Methanogenium cariaci | 1 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium | 1 |
| All Organisms → cellular organisms → Bacteria | 1 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Wastewater Microbial Communities From Belvaux, Luxembourg |
| Type | Engineered |
| Taxonomy | Engineered → Wastewater → Unclassified → Unclassified → Unclassified → Wastewater → Wastewater Microbial Communities From Belvaux, Luxembourg |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | CRP-GL Belvaux Luxembourg | |||||||
| Coordinates | Lat. (o) | 49.506095 | Long. (o) | 5.943536 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F016964 | Metagenome / Metatranscriptome | 243 | Y |
| F025288 | Metagenome / Metatranscriptome | 202 | N |
| F037272 | Metagenome / Metatranscriptome | 168 | Y |
| F039408 | Metagenome / Metatranscriptome | 164 | Y |
| F045124 | Metagenome / Metatranscriptome | 153 | Y |
| F060932 | Metagenome / Metatranscriptome | 132 | N |
| F080011 | Metagenome / Metatranscriptome | 115 | N |
| F103315 | Metagenome / Metatranscriptome | 101 | N |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| CSTRM4_101494 | Not Available | 1590 | Open in IMG/M |
| CSTRM4_103293 | All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009 | 1532 | Open in IMG/M |
| CSTRM4_104251 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi | 2763 | Open in IMG/M |
| CSTRM4_104981 | Methanogenium → Methanogenium cariaci | 2238 | Open in IMG/M |
| CSTRM4_105191 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium | 1002 | Open in IMG/M |
| CSTRM4_105837 | Not Available | 1293 | Open in IMG/M |
| CSTRM4_106486 | All Organisms → cellular organisms → Bacteria | 2170 | Open in IMG/M |
| CSTRM4_106823 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium | 1255 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| CSTRM4_101494 | CSTRM4_1014944 | F080011 | MTWDELEELRDRLSYILERERAEDGFCPIEEGYYVLYRQAARRAVADIDPSHSRDRDHYRILQEIYDAVGEIYDIRSAKLRMAVQDRVVFRRDVDRPENLTVEEQERYDMAISLGGHNAAE* |
| CSTRM4_103293 | CSTRM4_1032931 | F103315 | DNRLYGNLFAAGFAGILSGLLALWSFNENTVYITTVPGTAITVDHYLNDTLANVTTTYAYQTHIVPIVDPALGYFWMLVMVFMWFLVGYFVLEIMHESRMPDDEEAYE* |
| CSTRM4_104251 | CSTRM4_1042514 | F016964 | YNIILINYRWDGELMLERGLRPLSNYFPFPSGSAEAQKTACRWGRVRVRVTVKHYRQEEIRWLVMRKKPY* |
| CSTRM4_104981 | CSTRM4_1049815 | F045124 | VSDDCALRAMIYETRQDVRWIKDTLKEIKDSNQARDELIAEIKARQDRQIGRDGAIAAAISAVVAFFTALASGGWFR* |
| CSTRM4_105191 | CSTRM4_1051912 | F025288 | VILLLGLIAGAGALGYQMGLRNANALALQGDDNAPSPRQQIPGMRDGLIIRRPAAFIGYFFLFPLRLLLGLAGLLLVVWLVVKVAKAAWNGGDHKPKPAEATVSPAATETVITEAPVSSSEPTSTPESDQK* |
| CSTRM4_105837 | CSTRM4_1058372 | F037272 | MTGKQIMRIHTANGVEEIDADRLIVEGDEYVLFQGEEEVLRVPIADILSETDPETGEEAGGIETIYSRS* |
| CSTRM4_106486 | CSTRM4_1064863 | F060932 | MKAKYWVILAASLVLLAGGAFVLTRSQDVAAQSPTPESYPATVTVRNFAPAGEKIQLGISSAQASQDTLTLTLTMSGVDYEEKISNYSFTGFEKLVCNPYIVAKEPVSAMFQGYEVKSGDPTQVVYTYSLKGNTYTELNLTMDWTIGPCAPAFDESNVKAPRNPLLTNYRFEFVVPVK* |
| CSTRM4_106823 | CSTRM4_1068231 | F039408 | MGEPVLERQMAGIALVQPDLAANFTVLPEVDKGAKAXFTRFYQRRKEIKAAAEPKQAIAIALSCVPSWTDAYYFLGAIEDIDTVQAAGEIEQDLITMRGERKGIAWIEKSYLMRIIAKEMQVKV* |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |