| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300001374 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0085351 | Gp0055455 | Ga0012436 |
| Sample Name | Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY88_21 |
| Sequencing Status | Permanent Draft |
| Sequencing Center | J. Craig Venter Institute (JCVI) |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 284463924 |
| Sequencing Scaffolds | 7 |
| Novel Protein Genes | 7 |
| Associated Families | 7 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| All Organisms → Viruses | 1 |
| All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp. | 1 |
| Not Available | 5 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Macroalgal Surface Microbial Communities |
| Type | Host-Associated |
| Taxonomy | Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Surface (saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Botany Bay, Sydney, NSW, Australia | |||||||
| Coordinates | Lat. (o) | -33.966629 | Long. (o) | 151.166614 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F005940 | Metagenome / Metatranscriptome | 386 | N |
| F005967 | Metagenome / Metatranscriptome | 385 | Y |
| F009188 | Metagenome / Metatranscriptome | 322 | Y |
| F013379 | Metagenome / Metatranscriptome | 272 | N |
| F015683 | Metagenome / Metatranscriptome | 253 | Y |
| F043156 | Metagenome / Metatranscriptome | 157 | Y |
| F092935 | Metagenome / Metatranscriptome | 107 | Y |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| BBAY8821_1000040 | All Organisms → Viruses | 20131 | Open in IMG/M |
| BBAY8821_1045755 | All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp. | 1025 | Open in IMG/M |
| BBAY8821_1079925 | Not Available | 568 | Open in IMG/M |
| BBAY8821_1685045 | Not Available | 960 | Open in IMG/M |
| BBAY8821_1689719 | Not Available | 1060 | Open in IMG/M |
| BBAY8821_1690171 | Not Available | 962 | Open in IMG/M |
| BBAY8821_1690576 | Not Available | 668 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| BBAY8821_1000040 | BBAY8821_100004014 | F015683 | MKKKIIKKMRKILQKIAWKTNLWTTKISLFNLYLGGDNHKFGFQILNIDKGIKWSGSLFEITWYFPTITHAGELTIDILFLFEKWDNWCIDMTDRVMWGSGLSRWERINRVIHSKFKSIR |
| BBAY8821_1045755 | BBAY8821_10457551 | F043156 | FEGYTTSILPIQEGIKYEEPLNIFEVDLQVQSGDCVSTPSGSFDATQRTIQVTQRTSYDGLCLDNLNPKYLGISALDAGSYNETFKLASVYTEQIVNQMKKSDDAFLWNTTNGLGLLTSGSTAGVVTPSGANIPVVVADILAIIDELIINLPDDVADRSDLTVWMSVASFRKYVTALRTLNNFYFDPGSIENRTGILQMAYPFQNVKVVGTSGISGERIALMPDAYAVVGTDLLSDVDNFSLWYDINADQLKHRLKSKLGVQVAFPEYIVSNDRN* |
| BBAY8821_1079925 | BBAY8821_10799251 | F009188 | FLVGDTGQIYEGRGFGNRSAAQGGNNREEINYNNKHYVAVCWLGGSNPTDKPSDKAIASVKWLYEQVGGELRPHSSFKQTQCPGDAWRQWIIEEQTPSIDNKSPDKVYIPDSFESKLDKILGKLENIERKLKLGKLIQ* |
| BBAY8821_1685045 | BBAY8821_16850452 | F092935 | MKKETKDSRMNSLILERKLAFANLVRAYLKFNVSDALNIVVEEEGNISINGNYYKFDVSDYTGCTENYIFLNPSSGRMLIQKDNVKKIYKLDVHLYDE* |
| BBAY8821_1689719 | BBAY8821_16897191 | F013379 | LTRMDDFVRCTTKGEVLSRFDEIKKQFSELKFRMKKNKSYTVTNSPCGWVTKTTGSPCLKPGFVEHNGRCQLHGKLLNVVTPGKVMRISKKNPCHVTFIGDDDTTTIVEDAGGRVGVELEVQGLFTGDYKQWKPEMGAGAIEWLKMRPNKFSELSWKNKSSYSLVKLESPTLADYMWKKETKKLGSVICNGHIYRVKYQKFRVEGRDNMNPRGKRNVKRHNEKMKGYKWYAFSTALVTNPHSHTYTPIEKR* |
| BBAY8821_1690171 | BBAY8821_16901711 | F005967 | MSISISSLPYGDRRPDLFIDAMVKSAAVLNRFRLIDGVKAKVNVPIFDASLTFGNDLCVFDSQSTASVGEKEMTVETYKWAFLNCKDALESSYRGLLLKQGQHNPETMDAEFKDWVFDYFAKLSAQKALELAGTEITTELAADADVLDYDTNAAISSTNILDLMEGAYGTM |
| BBAY8821_1690576 | BBAY8821_16905761 | F005940 | QGRWMSVKLTITTSDTSKTPEMLSFAVRGFQLVNDLVVDMPINISDQVERPFRKALRVNGQGELIYQALRNKEGQNVQLEIFRPDTLLRGIIENVSSPVEEISARGSVTTYCLVRFRGSKVISTSSSGEGLGIGLLGVKRLG* |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |