| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300000977 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0085351 | Gp0056453 | Ga0011750 |
| Sample Name | Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY70 |
| Sequencing Status | Permanent Draft |
| Sequencing Center | J. Craig Venter Institute (JCVI) |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 859331921 |
| Sequencing Scaffolds | 5 |
| Novel Protein Genes | 5 |
| Associated Families | 4 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes | 2 |
| All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda | 2 |
| All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Siphonostomatoida → Caligidae → Lepeophtheirus → Lepeophtheirus salmonis | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Macroalgal Surface Microbial Communities |
| Type | Host-Associated |
| Taxonomy | Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface → Macroalgal Surface Microbial Communities |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Surface (saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Botany Bay, Sydney, NSW, Australia | |||||||
| Coordinates | Lat. (o) | -33.966629 | Long. (o) | 151.166614 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F002829 | Metagenome / Metatranscriptome | 527 | Y |
| F028441 | Metagenome / Metatranscriptome | 191 | Y |
| F052608 | Metagenome / Metatranscriptome | 142 | Y |
| F059045 | Metagenome / Metatranscriptome | 134 | Y |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| BBAY70_10000030 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes | 146103 | Open in IMG/M |
| BBAY70_10002834 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes | 7671 | Open in IMG/M |
| BBAY70_10110884 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda | 891 | Open in IMG/M |
| BBAY70_10246726 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Podoplea → Siphonostomatoida → Caligidae → Lepeophtheirus → Lepeophtheirus salmonis | 513 | Open in IMG/M |
| BBAY70_12479908 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda | 548 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| BBAY70_10000030 | BBAY70_100000306 | F028441 | MTLKQLIKLEDKAKEVWVISPTLHYDVENKEFSEIVSVNLGEKTKYRYIVPATATVEKNIKLYKSMYKVSAKDIATNFLFLPVSDFVPFFTECAIYNATSKTPVALAAPATDDSNEIIKFNKKTTKAMVRAYKALWKKYKRTNP* |
| BBAY70_10002834 | BBAY70_100028343 | F028441 | MTLKQLIKLEDRAKEVWVVSPTLHYDVENKDFNELVSVNLGQKTKYRYIVPATSTVKKNMGLYKKMYNLTEEEMFNNFLLLPASEFNPFVTEVAVYNGSSKSPIAVTAPAREDSKDVIRFKKASAVQMAKEFKSLWKRYMRKNP* |
| BBAY70_10110884 | BBAY70_101108842 | F059045 | LAADEIPKEDTVALLAELADPEDEDGFFPYTPFIDRLTGKA* |
| BBAY70_10246726 | BBAY70_102467261 | F002829 | ADEWVKKVETLVKEWQLLDSTVTELNSWVADDRAKETEQQFSLEKMESTLGELKNIFKEKEKLVENL* |
| BBAY70_12479908 | BBAY70_124799081 | F052608 | KIFGDSKSTIENLYKSIQENYDIMTMTLPDDKKDFVKKEVKAITEKLECVGKFEEKVKKIEDFVENLKEFDNSLKGMDKWMTDSEQQLKDIKDSSDKMTPEDRVSYTMELQEDVGSKVRLIEELIKKEEGLLPQGDKVPQDAEDFKIELKRIHDFVKELQKKVMTECDNFSEDVKYWAEYKT |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |