| Basic Information | |
|---|---|
| IMG/M Taxon OID | 2236876022 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0050867 | Gp0052623 | Ga0011308 |
| Sample Name | Saline water concentrator pond microbial communities from Bras del Port saltern, Spain - DCM |
| Sequencing Status | Permanent Draft |
| Sequencing Center | GATC-Biotech AG, Konstanz, Germany |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 290618382 |
| Sequencing Scaffolds | 3 |
| Novel Protein Genes | 3 |
| Associated Families | 3 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| Not Available | 2 |
| All Organisms → cellular organisms → Eukaryota → Haptista | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Saline Water Concentrator Pond Microbial Communities From Bras Del Port Saltern, Santa Pola, Spain |
| Type | Environmental |
| Taxonomy | Environmental → Aquatic → Marine → Oceanic → Unclassified → Saline Water Concentrator Pond → Saline Water Concentrator Pond Microbial Communities From Bras Del Port Saltern, Santa Pola, Spain |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | aquatic biome → saline evaporation pond → saline water |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Hypersaline (saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Spain: Bras del Port | |||||||
| Coordinates | Lat. (o) | 38.1875529 | Long. (o) | -0.6338098 | Alt. (m) | N/A | Depth (m) | 3010 | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F030973 | Metagenome / Metatranscriptome | 183 | Y |
| F046986 | Metagenome | 150 | Y |
| F097516 | Metagenome | 104 | N |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| DCM3_p0013975 | Not Available | 534 | Open in IMG/M |
| DCM3_p0048888 | All Organisms → cellular organisms → Eukaryota → Haptista | 502 | Open in IMG/M |
| DCM3_p0935928 | Not Available | 534 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| DCM3_p0013975 | DCM3_00139751 | F046986 | KMSARFNISIRTGHDDYKRAMQLLREEQQGTREELLNQLQALRLATVQRALKRGHYQTVATLLGDMGRVIGEAAPEQLALQVPTLDIRIENENQSQ |
| DCM3_p0048888 | DCM3_00488881 | F030973 | MYQKRMQGEWNAGMLGSRNYSAVRLSEGRHWKGNLYGTTINDQHQGHRNYDCPHIFSKGPEPKFENMDHAMKHKSVYLGFYGN |
| DCM3_p0935928 | DCM3_09359281 | F097516 | MVINSQLAPCQQSYRITLDLTVTEDFNPHQIDFRRVFDLSEWESINTHIEEL |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |