Sample 2022920003

Basic Information
IMG/M Taxon OID	2022920003 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0045212 \| Gp0051291 \| Ga0026296
Sample Name	Hot spring microbial communities from Yellowstone National Park, Wyoming, USA - YNP5 Bath Lake Vista Annex
Sequencing Status	Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	Y
Use Policy	Open

Basic Information

IMG/M Taxon OID

2022920003 Open in IMG/M

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Gs0045212 | Gp0051291 | Ga0026296

Sample Name

Hot spring microbial communities from Yellowstone National Park, Wyoming, USA - YNP5 Bath Lake Vista Annex

Sequencing Status

Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	31324257
Sequencing Scaffolds	21
Novel Protein Genes	25
Associated Families	24

Dataset Contents

Total Genome Size

31324257

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	12
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria	6
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halobacteriaceae → Haladaptatus → Haladaptatus paucihalophilus → Haladaptatus paucihalophilus DX253	1
All Organisms → Viruses → Predicted Viral	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

Not Available

All Organisms → cellular organisms → Bacteria → Proteobacteria

All Organisms → cellular organisms → Bacteria

All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halobacteriaceae → Haladaptatus → Haladaptatus paucihalophilus → Haladaptatus paucihalophilus DX253

All Organisms → Viruses → Predicted Viral

Ecosystem Assignment (GOLD)
Name	Hot Spring Microbial Communities From Yellowstone National Park, Wyoming, Usa
Type	Environmental
Taxonomy	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Hot Spring Microbial Communities From Yellowstone National Park, Wyoming, Usa

Ecosystem Assignment (GOLD)

Name

Hot Spring Microbial Communities From Yellowstone National Park, Wyoming, Usa

Type

Environmental

Taxonomy

Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring → Hot Spring Microbial Communities From Yellowstone National Park, Wyoming, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → hot spring → spring water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

aquatic biome → hot spring → spring water

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Water (non-saline)

Location Information
Location	Yellowstone National Park, WY
Coordinates	Lat. (^o)	44.96507	Long. (^o)	-110.71215	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

Yellowstone National Park, WY

Coordinates

Lat. (^o)

44.96507

Long. (^o)

-110.71215

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F002970	Metagenome / Metatranscriptome	517	N
F002978	Metagenome / Metatranscriptome	516	Y
F003460	Metagenome / Metatranscriptome	485	Y
F004367	Metagenome / Metatranscriptome	441	Y
F005302	Metagenome / Metatranscriptome	405	Y
F005631	Metagenome / Metatranscriptome	394	N
F015737	Metagenome / Metatranscriptome	252	N
F025895	Metagenome / Metatranscriptome	199	Y
F031513	Metagenome / Metatranscriptome	182	N
F035323	Metagenome / Metatranscriptome	172	Y
F036493	Metagenome	170	N
F060939	Metagenome / Metatranscriptome	132	N
F061617	Metagenome / Metatranscriptome	131	N
F064295	Metagenome / Metatranscriptome	128	N
F073601	Metagenome / Metatranscriptome	120	Y
F075804	Metagenome / Metatranscriptome	118	N
F079731	Metagenome / Metatranscriptome	115	Y
F081941	Metagenome / Metatranscriptome	114	N
F085749	Metagenome / Metatranscriptome	111	N
F087679	Metagenome	110	Y
F093913	Metagenome / Metatranscriptome	106	Y
F097407	Metagenome / Metatranscriptome	104	N
F097413	Metagenome / Metatranscriptome	104	N
F101227	Metagenome / Metatranscriptome	102	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
YNPsite05_CeleraDRAF_100727	Not Available	738	Open in IMG/M
YNPsite05_CeleraDRAF_102295	All Organisms → cellular organisms → Bacteria → Proteobacteria	690	Open in IMG/M
YNPsite05_CeleraDRAF_103017	Not Available	511	Open in IMG/M
YNPsite05_CeleraDRAF_109678	Not Available	787	Open in IMG/M
YNPsite05_CeleraDRAF_80696	Not Available	648	Open in IMG/M
YNPsite05_CeleraDRAF_93769	Not Available	575	Open in IMG/M
YNPsite05_CeleraDRAF_deg1119010629743	Not Available	834	Open in IMG/M
YNPsite05_CeleraDRAF_deg1119010629926	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
YNPsite05_CeleraDRAF_deg1119010631771	Not Available	967	Open in IMG/M
YNPsite05_CeleraDRAF_scf1119010633382	Not Available	11518	Open in IMG/M
YNPsite05_CeleraDRAF_scf1119010633654	Not Available	18013	Open in IMG/M
YNPsite05_CeleraDRAF_scf1119010634677	All Organisms → cellular organisms → Bacteria	12224	Open in IMG/M
YNPsite05_CeleraDRAF_scf1119010634922	Not Available	3096	Open in IMG/M
YNPsite05_CeleraDRAF_scf1119010635133	All Organisms → cellular organisms → Bacteria	21664	Open in IMG/M
YNPsite05_CeleraDRAF_scf1119010635237	Not Available	5430	Open in IMG/M
YNPsite05_CeleraDRAF_scf1119010635513	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
YNPsite05_CeleraDRAF_scf1119010635633	All Organisms → cellular organisms → Bacteria	16498	Open in IMG/M
YNPsite05_CeleraDRAF_scf1119010636115	All Organisms → cellular organisms → Bacteria	6696	Open in IMG/M
YNPsite05_CeleraDRAF_scf1119010636345	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales → Halobacteriaceae → Haladaptatus → Haladaptatus paucihalophilus → Haladaptatus paucihalophilus DX253	1422	Open in IMG/M
YNPsite05_CeleraDRAF_scf1119010637341	All Organisms → Viruses → Predicted Viral	1435	Open in IMG/M
YNPsite05_CeleraDRAF_scf1119010638092	Not Available	5574	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
YNPsite05_CeleraDRAF_100727	YNPsite05_CeleraDRAFT_99870	F079731	TQISASGVFNGQVSAPNFGVMWGGGLQELYPGLTPSNRPTCLISFPVSEGPDRQIIFRLNGNNSMTILGEGRVQVGALPNNAFSLIERSRFGVVMDLHRANYVTPVNGRVFEGGAIVFQGSTGSIINGADFISTIRSRFDTNSNITQYRFANYFSVARYDPSPRIFMNAAFDSVIWCWVPQGFTLPPGYQKSVNTNRGLSHVALNIYSNTVGPGGYPNVPPITVPSGINSLIKGIEIVFDQSQMF
YNPsite05_CeleraDRAF_102295	YNPsite05_CeleraDRAFT_474090	F087679	DPGEWVCLEVHASLNPDPSSSTGALLEVWKGDILVQRFDDTGPLGYWIRVKFCPAGADGSECTNSPAPADTILDLQMRSTTALRLNAFWPQNYITEGPEGSVQYDHMVVATRRVGCLR
YNPsite05_CeleraDRAF_103017	YNPsite05_CeleraDRAFT_140290	F073601	MLQAKATCLVMALPAKRREGQRMFWVLHFAWCCAIKIMACGSIIRPLPVEKKALAGMGVLLQQG
YNPsite05_CeleraDRAF_109678	YNPsite05_CeleraDRAFT_157290	F002978	MGSLRDWRVILRPWADRRLWFLQARRGGRVVWGVVYDAADPESVALARRAVATLRSAGADCSALPSVLPGAPGAR
YNPsite05_CeleraDRAF_109678	YNPsite05_CeleraDRAFT_157300	F031513	RGWLLLWDELGGWRALSATYGDSGIVADGVTYPASLPVVRVGRDLVWIARCDSAALVEHQALERARESAALASLWRGGGQWLDFLRVVGVVLPAVFAYATWSQVAALQSLVAQILSLVGEGK
YNPsite05_CeleraDRAF_69076	YNPsite05_CeleraDRAFT_403810	F085749	MTEIVMNQSELAAEIAARLRDEVAAAVKAQRVGVATELDEEGADVGASFGDFLKSVAYNDTRRLRAIYKSAKALDETTGAGGGFLVPTQFEQRIRA
YNPsite05_CeleraDRAF_80696	YNPsite05_CeleraDRAFT_47440	F036493	MLKCGLNASVKRVRVMLLSSIALSSTLVWVLTVAVAVVASIKVRQSSVFNALIAIASTLVWATVAPGVSLHVRYWPTIAFALLGIL
YNPsite05_CeleraDRAF_93769	YNPsite05_CeleraDRAFT_01570	F073601	MLQAKATCLVMVLPAKRREGQRMFWRLHIAWRCAIKIMACGSIIRTLPVEQKALAGMGVLLQQG
YNPsite05_CeleraDRAF_deg1119010629743	YNPsite05_CeleraDRAFT_318980	F035323	MRVRQIGTLVFDANTNIVVDADAQDAPGVGFHVTRLDDLQPFAVEIAFKRDTRQQALEAVNALARELFSYAQRRQDNYLAIAGGAPVFIEDATGGATLRSYLRDSSVTLLGVETTATGVIARARVLGTLINSLLNYSSTQTTVSSLLPYERRSVTLSGSSDAHLYKNSVALNVYDMSGLYNALLAIEELESATATSRISVVNPAGDPLESTCRH
YNPsite05_CeleraDRAF_deg1119010629926	YNPsite05_CeleraDRAFT_386750	F005631	MKLNVAVDIDNALRKLLPQTQRIEAALDAGAAAAHSVMQVYPPPPANSRYRRTGNLRQKLRIKKLSRTSRIVENTASYAQYVYGMPQARIHRGRWATVEDAAEAARAEAEKVLRGR
YNPsite05_CeleraDRAF_deg1119010631771	YNPsite05_CeleraDRAFT_189530	F005302	MAHSGVISGLYAGNFAVEISTDGTNWTAVSDATVKIDDVEMTRPSGEAYVGGSSDYATITIGKREPVEITLTFLYSEATGAAATAIYDQFESATPRLGVRWSPTGLVASARAYATSNDGNATGLGVITGVTLSALDPSEAEPYVMMVTVRTPTLRQYAIAATNPTNLA
YNPsite05_CeleraDRAF_deg1119010631771	YNPsite05_CeleraDRAFT_189540	F064295	MSEPAKIFDVDALRVDRTALTIREAATLLNRELTPEVIARLVRKAIGNQADQFPIRALKAVYERALPKIFEPDEAIRSKVAGLTPNVTT
YNPsite05_CeleraDRAF_scf1119010633382	YNPsite05_CeleraDRAFT_57310	F015737	MLLGQLYYYNKLLNSLSFPLTKEQLLHLELAGTSKLELNSLYHLSLNDLIRKLKDLFSYSYGQLLQQESLAFATQFWSNLVSATIPTEKTKLNPKTAFQQTLLNWQEKQFTTELIPEILKEGELTTDLEDFALFYGIKVLAILNQDILNTQLGSTEWQLPETTTTPGSLSTKPNILVLTSEIYAPLFINLNCEYLPISEDLPELLKAVTQIITNNPEIKLILINSDNEKIETYLHKHLTSNVLITTIEFTKFAQDAFFDNLVRKTLGVRLT
YNPsite05_CeleraDRAF_scf1119010633654	YNPsite05_CeleraDRAFT_333700	F097407	LLGGQIVFLMSSDFPSLKEEYHHLYEYVSTLAWMQYEQMKKKGKEYTGYVYFFGRTVHRLLHPLYFFHQTEEPKFWFEEQTFDPNNPAETFPTWEAKKAYLLARFREKKFEIYDANFSRKVLSRYNHQIIQWLVKNNYHRLIEFDRCLGFYLDILNWTEEHFISFYENRLVNLLVTDYSPKTLSTTESWCQVV
YNPsite05_CeleraDRAF_scf1119010634677	YNPsite05_CeleraDRAFT_356740	F061617	MAKTLNALANRKKVRTRQILNQSNLYYLNNRRLSFLPKIFLGFSIVLVICGLLWYLNVFDLQTVVGQPVSHQSEQLTALDLIRQLNSNTTSQANTTDEQTANWQSLNSDKLVLLTAQNGATCALSLQPNPPENIKPIVQNQPQGWWLPSHCAVSELVAVQIVRLNSTEANKLAQAANLIQVQNLDGLDTYAIIYFNQPSKTSFDLKKYLKSLTANIFTDRFYFNTTSAHDTKKIGDWIYYLDGECAGPSSYRDPCKLWRSDRNTGTIELLKKKRR
YNPsite05_CeleraDRAF_scf1119010634922	YNPsite05_CeleraDRAFT_98250	F025895	MNELIAWIIAAAVILLLANTTIADSLLDALDLSDNLKRAADWARGVRDVPAAVSAICFFVLAYVFGALAYRYDLLPTYRFIQPVAQDVLASGAEWLTLFALFLTLLPTLIELASVGLVQRSIKALEYMTYFFIFFDLVTDYTEAAALVEVWQRSGLFDPLPSLIAGAAVVLAKISWTFAASFAFEFLAILFAMTGLLLAANVRAPTAGGGMR
YNPsite05_CeleraDRAF_scf1119010635133	YNPsite05_CeleraDRAFT_312610	F101227	MTPKSVSAYYVAILFTTVLFQLDGLRWLVISIQQWLISGLQSVTTLPITATIYWIVLFLVTAIITSLFKFFIIDPLELHANDDQTRDWWVWLFALLVFGLFIYTLNLNFNQSMPLELPKFLVKIFQGSRNTPGAEINSLAESNFYSIFPWLWQVGPVIFMYYYASQEKSKKASSS
YNPsite05_CeleraDRAF_scf1119010635237	YNPsite05_CeleraDRAFT_416300	F097413	LHACRSTLEDPHNCKVFLGVSREGGHIIGHFPIFDIESIKIDYDIVSKGKNKINYAGPKVAAGENGVGIISVDQFGRDEWSFETRFWDGESETYSDRAYRIFTDDYFLFVARVAYYKGNWIAIAPIEREYKVANLGPDLKKKGNINQIEWKTFESDQVTYGGHAELITNRDFTELYAIFGARGDNSQIITIMKYKEATNNEATGTFEKIAEINTRDTNVGVCYRPSGALDSQGNLHFTCDDTGGSLYYYTNANPKGSWEKQLLTNNGISGVLRIDEKDGIHVGFLTFKPSGPAYMYSSDGKTWTRPIVANEIVNPKYVYTANMIGGVALHGQNPYXXXXXX
YNPsite05_CeleraDRAF_scf1119010635513	YNPsite05_CeleraDRAFT_189750	F093913	MRFYVKSVGTNIALVDIDTGDKVSVPTTALQKLFGVTPQQDEVWEFRAVRLDDIAESFRRWQVVQQALQQQGAQAQ
YNPsite05_CeleraDRAF_scf1119010635633	YNPsite05_CeleraDRAFT_312830	F081941	MVILALYIIFNIFLFGILKIESTNYIISQFFSSLEILGILSLSLFIISGFHFILIQLSNLPYSDYKLEITTAIFFVLNFLLSIPTGFTATQFELSPSLKLLLDTIYMMTGSIYLVLAAGVFYMDLEVNKILAKRYTRWSVIVFSIFFYLISLETERYSMELNILLTFTGINSLLILVIMFADLKSLLNPYPNYQGKTNSIEIISFLLLSTTILIGKTLHLVLVLNIFG
YNPsite05_CeleraDRAF_scf1119010636115	YNPsite05_CeleraDRAFT_294090	F075804	MLKHISSSLSHSKKYRLWQEAYWLVLLNQALKTFTEQHLQLKNPEIRAFVRLQGQVLHVKIAAKEPTVLAALKIAQKALLDFLHQNLLQKAQLVTQLKISFLVK
YNPsite05_CeleraDRAF_scf1119010636345	YNPsite05_CeleraDRAFT_21540	F004367	MGGTTTSNGRDGEMAWVEGLLTGAGASIGRVLDERQVHAVELALEVFAYLLAAMPAERAPVADIIRLLKFYSNGVRNAKSES
YNPsite05_CeleraDRAF_scf1119010636345	YNPsite05_CeleraDRAFT_21560	F003460	MPKASRDERYFHDLQHAYGVLHEVLAPRGLYAEASLMLMVNLRRPGELRDVTVELIIRARAGGSPVWRAYESLKVPGRMKLRSIAGVLFGLMMRATYDVEAQISLPGEGRPHHQGGA
YNPsite05_CeleraDRAF_scf1119010637341	YNPsite05_CeleraDRAFT_17910	F002970	MSYSTVVDIIELLAGLAVQYNSVTVPVQRLATQATWSDAAQLPVRIIPVLGGLRLIEGGVYTATRATRAVWEIDDLLLVRDVGMGRGLADIAAALAGYIEDYVAKLRFAWLARGDVQLFNVSGIIDVVRYGERAYEGVTMTVRFAHLVCSPSV
YNPsite05_CeleraDRAF_scf1119010638092	YNPsite05_CeleraDRAFT_269840	F060939	MLWRLRVWFQDASGTTSYTGAWLRSPNETAIFAFVDALRGLSNAQITHVDISRRFPYTSQVPSGRDRGVAMFVQPAYNPDAPGVVSDAFPMWVPESELYAVRDLWGYPITVRGFVSRAGYNMDEVVPEDGEPQSLDNEYPDSTDDYYLVAIRRNFWHRLLRDARAYNTLSMTLPDEKARRVRLDIRDLFLGVPMREVIERLDTIIEILQEGSVNTDEVEMLLMQLIEALGAP

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

2022920003: Hot spring microbial communities from Yellowstone National Park, Wyoming, USA - YNP5 Bath Lake Vista Annex

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences