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Sample 2010484004
2010484004: Acid Mine Drainage (ARMAN) microbial communities from Richmond mine, Iron Mountain, CA, sample from Ultra Back A BS
Overview
| Basic Information |
| IMG/M Taxon OID | 2010484004 Open in IMG/M |
GOLD Reference
(Study | Sequencing Project | Analysis Project) | Gs0053288 | Gp0051182 | Ga0026418 |
| Sample Name | Acid Mine Drainage (ARMAN) microbial communities from Richmond mine, Iron Mountain, CA, sample from Ultra Back A BS |
| Sequencing Status | Permanent Draft |
| Sequencing Center | DOE Joint Genome Institute (JGI), University of California, Berkeley |
| Published? | Y |
| Use Policy | Open |
| Dataset Contents |
| Total Genome Size | 20656958 |
| Sequencing Scaffolds | 2 |
| Novel Protein Genes | 2 |
| Associated Families | 1 |
| Dataset Phylogeny |
| Taxonomy Groups | Number of Scaffolds |
|---|
| Not Available | 1 |
| All Organisms → cellular organisms → Bacteria → Proteobacteria | 1 |
Ecosystem and Geography
| Ecosystem Assignment (GOLD) |
| Name | Acid Mine Drainage (Amd) Microbial And Viral Communities From Richmond Mine, Iron Mountain, Ca |
| Type | Environmental |
| Taxonomy | Environmental → Aquatic → Freshwater → Groundwater → Acid Mine Drainage → Acid Mine Drainage (Amd) → Acid Mine Drainage (Amd) Microbial And Viral Communities From Richmond Mine, Iron Mountain, Ca |
| Location Information |
| Location | Iron Mountain California |
| Coordinates | Lat. (o) | 40.678099 | Long. (o) | -122.515068 | Alt. (m) | N/A | Depth (m) | N/A |
Location on Map |
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Associated Families
| Family | Category | Number of Sequences | 3D Structure? |
|---|
| F026917 | Metagenome | 196 | Y |
Sequences
| Scaffold ID | Protein ID | Family | Sequence |
|---|
| UBABS_BWON22702_y1 | UBABS_240240 | F026917 | MIHAADMCDAERQIRQKVIMVVADETRFGTLSTGERIAVALVLERYDLLQRAWGRMLESVHRLGPLWTEAALRVQRQGWEEDPTS |
| UBABS_C202 | UBABS_04730 | F026917 | MTELDAAARQILEKVRMFLADETRFGVLSSGERIAVAVVLDRHDLIQRAWGTIAEAVDRLGPTWTAAALRVQRNGWQEDATE |
