Metagenome / Metatranscriptome Family F102970

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102970
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	88 residues
Representative Sequence	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKLVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKNTVIVGF
Number of Associated Samples	81
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.00 %
% of genes near scaffold ends (potentially truncated)	25.74 %
% of genes from short scaffolds (< 2000 bps)	85.15 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.010 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (32.673 % of family members)
Environment Ontology (ENVO)	Unclassified (65.347 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.317 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.38% β-sheet: 45.05% Coil/Unstructured: 39.56%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF14235	DUF4337	32.67
PF13439	Glyco_transf_4	10.89
PF03949	Malic_M	5.94
PF13505	OMP_b-brl	3.96
PF14076	DUF4258	2.97
PF01972	SDH_sah	1.98
PF01494	FAD_binding_3	1.98
PF02371	Transposase_20	1.98
PF02557	VanY	1.98
PF00390	malic	0.99
PF13539	Peptidase_M15_4	0.99
PF13442	Cytochrome_CBB3	0.99
PF01663	Phosphodiest	0.99
PF04055	Radical_SAM	0.99
PF01738	DLH	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0281	Malic enzyme	Energy production and conversion [C]	6.93
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	5.94
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	3.96
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	3.96
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.98
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.98
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	1.98
COG1876	LD-carboxypeptidase LdcB, LAS superfamily	Cell wall/membrane/envelope biogenesis [M]	1.98
COG2173	D-alanyl-D-alanine dipeptidase	Cell wall/membrane/envelope biogenesis [M]	1.98
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.01 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	69.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.98 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.98 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Nitrospirae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae	64.36 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	2.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.98 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.99 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	64.36 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	2.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.98 %
unclassified Armatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes	0.99 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	64.36 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	2.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.98 %
Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20	0.99 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	64.36 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1.98 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.98 %
Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20	0.99 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	64.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.98 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.99 %
Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20	0.99 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.99 %
Unclassified	root	N/A	0.99 %

Name	Rank	Taxonomy	Distribution
Nitrospirae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	64.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.98 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	0.99 %
Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20	0.99 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.99 %
Unclassified	root	N/A	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10090746	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	926	Open in IMG/M
3300002560\|JGI25383J37093_10133935	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	676	Open in IMG/M
3300002560\|JGI25383J37093_10172903	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	569	Open in IMG/M
3300002908\|JGI25382J43887_10089689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1640	Open in IMG/M
3300002912\|JGI25386J43895_10050281	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1198	Open in IMG/M
3300005167\|Ga0066672_10733020	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	629	Open in IMG/M
3300005171\|Ga0066677_10535244	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	671	Open in IMG/M
3300005174\|Ga0066680_10853854	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	543	Open in IMG/M
3300005181\|Ga0066678_10594780	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	735	Open in IMG/M
3300005186\|Ga0066676_10192547	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300005186\|Ga0066676_10219575	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300005187\|Ga0066675_10802579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20	711	Open in IMG/M
3300005445\|Ga0070708_100100183	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2651	Open in IMG/M
3300005445\|Ga0070708_100712009	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300005446\|Ga0066686_10921478	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	572	Open in IMG/M
3300005447\|Ga0066689_10328614	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300005447\|Ga0066689_10710491	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	628	Open in IMG/M
3300005467\|Ga0070706_100723093	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300005536\|Ga0070697_101244680	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	663	Open in IMG/M
3300005552\|Ga0066701_10267300	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1058	Open in IMG/M
3300005552\|Ga0066701_10579852	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300005555\|Ga0066692_10735774	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	609	Open in IMG/M
3300005557\|Ga0066704_10597340	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	710	Open in IMG/M
3300005558\|Ga0066698_10531895	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	798	Open in IMG/M
3300005559\|Ga0066700_10409566	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300005586\|Ga0066691_10472417	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	749	Open in IMG/M
3300005586\|Ga0066691_10640854	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	630	Open in IMG/M
3300005598\|Ga0066706_10319646	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300006794\|Ga0066658_10074694	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300006796\|Ga0066665_10416424	All Organisms → cellular organisms → Bacteria → Proteobacteria	1110	Open in IMG/M
3300006797\|Ga0066659_11792033	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	519	Open in IMG/M
3300009012\|Ga0066710_103366312	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300009012\|Ga0066710_104056010	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	548	Open in IMG/M
3300009038\|Ga0099829_10216900	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1553	Open in IMG/M
3300009038\|Ga0099829_11458046	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	565	Open in IMG/M
3300009088\|Ga0099830_10327272	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1228	Open in IMG/M
3300009089\|Ga0099828_11298617	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	644	Open in IMG/M
3300009090\|Ga0099827_10529168	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1014	Open in IMG/M
3300009090\|Ga0099827_10902167	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	766	Open in IMG/M
3300010301\|Ga0134070_10268991	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	642	Open in IMG/M
3300010304\|Ga0134088_10046122	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1996	Open in IMG/M
3300010333\|Ga0134080_10427690	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	617	Open in IMG/M
3300010335\|Ga0134063_10534081	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	590	Open in IMG/M
3300010336\|Ga0134071_10318254	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	783	Open in IMG/M
3300011269\|Ga0137392_10542813	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	965	Open in IMG/M
3300012096\|Ga0137389_11481463	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	574	Open in IMG/M
3300012201\|Ga0137365_10091901	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2285	Open in IMG/M
3300012204\|Ga0137374_10011862	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	10186	Open in IMG/M
3300012206\|Ga0137380_10947181	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	738	Open in IMG/M
3300012207\|Ga0137381_10621474	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300012207\|Ga0137381_11362383	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	602	Open in IMG/M
3300012349\|Ga0137387_10375955	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1029	Open in IMG/M
3300012351\|Ga0137386_10639763	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	765	Open in IMG/M
3300012360\|Ga0137375_10123279	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2585	Open in IMG/M
3300012972\|Ga0134077_10086333	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300012977\|Ga0134087_10217080	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	863	Open in IMG/M
3300014154\|Ga0134075_10220323	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300015356\|Ga0134073_10144898	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	746	Open in IMG/M
3300015358\|Ga0134089_10554523	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	509	Open in IMG/M
3300015359\|Ga0134085_10211055	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	838	Open in IMG/M
3300017656\|Ga0134112_10150389	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	895	Open in IMG/M
3300017656\|Ga0134112_10347595	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300017656\|Ga0134112_10434972	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300017657\|Ga0134074_1037547	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1627	Open in IMG/M
3300017659\|Ga0134083_10057559	All Organisms → cellular organisms → Bacteria → Nitrospirae	1474	Open in IMG/M
3300017939\|Ga0187775_10517115	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	511	Open in IMG/M
3300017966\|Ga0187776_10188812	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1290	Open in IMG/M
3300017997\|Ga0184610_1021638	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1737	Open in IMG/M
3300018052\|Ga0184638_1023908	All Organisms → cellular organisms → Bacteria	2177	Open in IMG/M
3300018053\|Ga0184626_10063832	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1549	Open in IMG/M
3300018056\|Ga0184623_10024600	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2690	Open in IMG/M
3300018075\|Ga0184632_10303364	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	691	Open in IMG/M
3300018433\|Ga0066667_10045950	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	2597	Open in IMG/M
3300019259\|Ga0184646_1164051	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	812	Open in IMG/M
3300025910\|Ga0207684_10001218	All Organisms → cellular organisms → Bacteria	28643	Open in IMG/M
3300025910\|Ga0207684_11249286	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	613	Open in IMG/M
3300026296\|Ga0209235_1021172	All Organisms → cellular organisms → Bacteria	3471	Open in IMG/M
3300026296\|Ga0209235_1024437	All Organisms → cellular organisms → Bacteria → Proteobacteria	3195	Open in IMG/M
3300026296\|Ga0209235_1049451	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300026297\|Ga0209237_1076924	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1545	Open in IMG/M
3300026297\|Ga0209237_1088677	All Organisms → cellular organisms → Bacteria → Nitrospirae	1392	Open in IMG/M
3300026298\|Ga0209236_1055894	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300026298\|Ga0209236_1177185	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	850	Open in IMG/M
3300026310\|Ga0209239_1313813	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	543	Open in IMG/M
3300026313\|Ga0209761_1089314	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1571	Open in IMG/M
3300026318\|Ga0209471_1273556	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	566	Open in IMG/M
3300026325\|Ga0209152_10175093	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	806	Open in IMG/M
3300026326\|Ga0209801_1058088	All Organisms → cellular organisms → Bacteria	1741	Open in IMG/M
3300026326\|Ga0209801_1321094	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	547	Open in IMG/M
3300026327\|Ga0209266_1241391	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	589	Open in IMG/M
3300026331\|Ga0209267_1131740	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300026332\|Ga0209803_1013474	All Organisms → cellular organisms → Bacteria	4226	Open in IMG/M
3300026334\|Ga0209377_1159474	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300026528\|Ga0209378_1049933	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300026529\|Ga0209806_1002919	All Organisms → cellular organisms → Bacteria	10450	Open in IMG/M
3300026532\|Ga0209160_1114036	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1342	Open in IMG/M
3300027846\|Ga0209180_10112502	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1558	Open in IMG/M
3300027882\|Ga0209590_11008399	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	519	Open in IMG/M
3300032180\|Ga0307471_100451811	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1424	Open in IMG/M
3300032180\|Ga0307471_100850633	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1079	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.06%
Aquatic	Environmental → Aquatic	5.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.06%
Sediment	Environmental → Aquatic → Sediment	4.95%
Freshwater	Environmental → Aquatic → Freshwater	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.15%
Loam	Environmental → Terrestrial → Soil → Loam	6.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	49.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	32.67%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	16.83%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	15.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.98%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100907461	3300002558	Grasslands Soil	GALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKLVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKNTVIVGF*
JGI25383J37093_101339351	3300002560	Grasslands Soil	MVGALIKLLPEPEHLNAKGKSVPLHSNEWRIESVGYKLVVLKNEQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF*
JGI25383J37093_101729031	3300002560	Grasslands Soil	MNVEQLQTMVGAQIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKIVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKNTVIVGF*
JGI25382J43887_100896891	3300002908	Grasslands Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKLVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKNTVIVGF*
JGI25386J43895_100502811	3300002912	Grasslands Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLHSNEWRIESVGYKLVVLKNEQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF*
Ga0066672_107330201	3300005167	Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKLVPLSSNEWRIESVGYKLVVLKNGQTGHSLTLGESNIRTFEGKKLTVCFKLVLKTKNTVIMGI*
Ga0066677_105352442	3300005171	Soil	MNVEQLQTVVGALVKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIMGI*
Ga0066680_108538542	3300005174	Soil	KLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIMGI*
Ga0066678_105947801	3300005181	Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIMGI*
Ga0066676_101925472	3300005186	Soil	MNVEQLQTVVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIVGS*
Ga0066676_102195751	3300005186	Soil	VGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKIVVLKNGQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF*
Ga0066675_108025792	3300005187	Soil	MNVEQLQTVVGALVKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIMG
Ga0070708_1001001833	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MIGTLVKLLPEPQHLNAKGKPVPLSSNEWRIESVGYKLVVLKNGQTGHSLTLGETNIRDFNNKRLTVRFQLVLKTKNTIIMGF*
Ga0070708_1007120092	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MNVEQLQPMVGAVIKLLPEPEHLNAKRKPVPLHSNEWRIESVGYKFVVLKNGQTGHSLTLGESNIRKFENKKMTVCFKLVLKTKNTVIVGF*
Ga0066686_109214781	3300005446	Soil	MNVEQLQPMVGALIRLLPEPEHLNAKGKSVPLHSNEWRIESVGYKLVVLKNEQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF*
Ga0066689_103286142	3300005447	Soil	MNVEQLQTVVGALVKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIVGS*
Ga0066689_107104912	3300005447	Soil	MNVEQLQTMVGAQIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKH
Ga0070706_1007230932	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MNVEQLQPMVGAVIKLLPEPEHLNAKRKPVPLHSNEWHIESVGYKFVVLKNGQTGHSVTLGESNIRKFENKKMTVCFKLVLKTKNTVIMGF*
Ga0070697_1012446801	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MNVEQLQTMVGAVIKLLPEPEHLNAKRKPVPLHSNEWRIETVGYRLVVLKNEQTGHSVTLGESNIRKFENKKMTVCFKLVLKTKNTVIMGF*
Ga0066701_102673001	3300005552	Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLHSNEWRIESVGYKIVVLKNGQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF*
Ga0066701_105798521	3300005552	Soil	LIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIMGI*
Ga0066692_107357741	3300005555	Soil	MNVEQLQTMVGAQIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKHTVIVGF*
Ga0066704_105973401	3300005557	Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKIVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKNTVIVGF*
Ga0066698_105318952	3300005558	Soil	MNVEQLQTVVGALIKLLPEPEHLNAKGKSVPLRSNEWRIQSVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIMGI*
Ga0066700_104095662	3300005559	Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGHKLVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKHTVIVGF*
Ga0066691_104724172	3300005586	Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKPVPLSSNEWRIESVGYKLVVLKNGQTGHSLTLGESNIRTFEGKKLTVCFKLVLKTKNTVIMGI*
Ga0066691_106408542	3300005586	Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKCVVLKNGQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF*
Ga0066706_103196462	3300005598	Soil	MNVEQLQTVVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIVGF*
Ga0066658_100746943	3300006794	Soil	PEPEHLNAKGKSVPLRSNEWRIESVGYKLVVLKNEQTGHSLTLGESNIRRCERKTMTVCFKLVLKTKNTVIVGF*
Ga0066665_104164243	3300006796	Soil	GYRSMNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKCVVLKNGQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF*
Ga0066659_117920332	3300006797	Soil	KLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKHTVIVGF*
Ga0066710_1033663122	3300009012	Grasslands Soil	EPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIMGI
Ga0066710_1040560102	3300009012	Grasslands Soil	EQLQTMVGAQIKLLPEPEHLNAKGKSVPLRSNEWRIESVGHKLVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKHTVIVGF
Ga0099829_102169002	3300009038	Vadose Zone Soil	MSVEQLQPMIGTLVRLLPEPEHLNAKGKPVPLSPNEWRIESVGYKLVVLKNGQTGHSLTLGETNIRDFDNKKLTVRFKLVLKTKNTIIMGF*
Ga0099829_114580461	3300009038	Vadose Zone Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKLVVLKNEQTGHSLTLGESNIRKFENKKMTVCFKLVLKTKHTVIVGF*
Ga0099830_103272722	3300009088	Vadose Zone Soil	MSVEQLQPMIGSLVKLLPEPQHLNAKGKPVPLSSNEWRIESVGYKLVVLKNGQTGHSLTIGETNLRDFSNKKLTVRFKLVLKTKNTIIMGF*
Ga0099828_112986171	3300009089	Vadose Zone Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKLVVLKNGQTGHSLTLGESNIRRCERKTMTVCFKLVLKTKNTVIVGF*
Ga0099827_105291682	3300009090	Vadose Zone Soil	MSVEQLQPMIGALVKLLPEPEQLNAKGRPVPMSSNEWRIESVGYRLVVLKNGQTGHSLTIGESNLRDFDNKKLTVRFKLVLKTKNTVILGF*
Ga0099827_109021671	3300009090	Vadose Zone Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKLVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKHTVIVGF*
Ga0134070_102689912	3300010301	Grasslands Soil	MNVEQLQTVVGALVKLLPEPEHLNAKGKSVPLRSNEWRIQSVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIMGI*
Ga0134088_100461224	3300010304	Grasslands Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIVGF*
Ga0134080_104276902	3300010333	Grasslands Soil	MNVEQLQTMVGAQIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKNTVIVGF*
Ga0134063_105340811	3300010335	Grasslands Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLHSNEWRIESVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIMGI*
Ga0134071_103182542	3300010336	Grasslands Soil	VGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGHKLVVLKNGQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF*
Ga0137392_105428131	3300011269	Vadose Zone Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKCVVLKNGQTGHSLTLGESNIRRCERKTMTVCFKLVLKTKNTVIVGF*
Ga0137389_114814631	3300012096	Vadose Zone Soil	PEHLNAKGKPVPLSPNEWRIESVGYKLVVLKNGQTGHSLTLGETNIRDFDNKKLTVRFKLVLKTKNTIIMGF*
Ga0137365_100919012	3300012201	Vadose Zone Soil	MSVSVDQFQPMIGALIKLLPEPEHLNAKGKPVPMSSNEWRIESVGYRLVVLKNGQTGHALTLGESNIRDFDGKKLILRFKLVRKTKNTVIMGF*
Ga0137374_100118625	3300012204	Vadose Zone Soil	MSVSVDQFQPMIGALIKLLPEPEHLNAKGKPVPMSSNEWRIESVGYRLVVLKNGQTGHALTLGESNIRDFDGKKLILRFKLVLKTKNTVIMGF*
Ga0137380_109471812	3300012206	Vadose Zone Soil	MNVEQLQTVVGALIKLLPEPEHLNAKGKSVPLRSNEWRIQSVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIVGS*
Ga0137381_106214742	3300012207	Vadose Zone Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIQSVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIVGS*
Ga0137381_113623831	3300012207	Vadose Zone Soil	MSVEQLQPMIGALVKLLPEPEQLNAKGKPVPMSSNEWRIESVSYKLVVLKNGQTGHSLTIGESNLRDFDNKKLTVRFKLVLKTKNT
Ga0137387_103759552	3300012349	Vadose Zone Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKIVVLKNGQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF*
Ga0137386_106397632	3300012351	Vadose Zone Soil	KLLPEPEHLNAKGKSVPLRSNEWRIQSVGYKFVVLKNEQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF*
Ga0137375_101232791	3300012360	Vadose Zone Soil	MSVSVDQFQPMIGALIKLLPEPEHLNAKGKPVPMSSNEWRIESIGYKLVVLKNGQTGHSLTIGESNLRDFDNKKLTVRFKLVLKTKNTVIMGF*
Ga0134077_100863332	3300012972	Grasslands Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKNTVIVGF*
Ga0134087_102170802	3300012977	Grasslands Soil	MNVEQLQTVVGALVKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKIVVLKNGQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF*
Ga0134075_102203232	3300014154	Grasslands Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLHSNEWRIESVGYKIVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKNTVIVGF*
Ga0134073_101448982	3300015356	Grasslands Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLHSNEWRIESVGYKIVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKNTVIVGS*
Ga0134089_105545231	3300015358	Grasslands Soil	TMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKIVVLKNGQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF*
Ga0134085_102110551	3300015359	Grasslands Soil	MNVEQLQTVVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKIVVLKNGQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF*
Ga0134112_101503892	3300017656	Grasslands Soil	MNVEQLQTVVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKIVVLKNGQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF
Ga0134112_103475952	3300017656	Grasslands Soil	EHLNAKGKSVPLRSNEWRIQSVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIVGS
Ga0134112_104349721	3300017656	Grasslands Soil	EPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKNTVIVGF
Ga0134074_10375471	3300017657	Grasslands Soil	VEQLQTMVGALIKLLPEPEHLNAKGKSVPLHSNEWRIESVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNKVIMGI
Ga0134083_100575593	3300017659	Grasslands Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKNTVIVGF
Ga0187775_105171151	3300017939	Tropical Peatland	MSMSVEQLQPMIGALVKLLPEPEQLNSKGKPVPLSSNEWRIESVGYKLVVLKNGQTGHSLTLGETNLRDFSNKKLTLRFKLVLKTKNTVIMGF
Ga0187776_101888121	3300017966	Tropical Peatland	MSMSVEQLQPMIGALVKLLPEPEQLNSKGKPVPMSSNEWRIESVGYKLVVLKNGQTGHSLTLGETNLRDFSNKKLTLRFKLVLKTKNTVIMGF
Ga0184610_10216382	3300017997	Groundwater Sediment	MSMSVEQLQPMIGALVKLLPEPQHLNAKGKPVPMSSNEWRIESVGYKLVVLKNGQTGHSLTLGESNIRDFDNKKLTVRFKLVLKTKNTIIMGF
Ga0184638_10239083	3300018052	Groundwater Sediment	MPISVEQIQPMIGTLVKLLPEPQHLNAKGKPVPLSSNEWRIESVGYKLVVLKNGQTGHSLTLGETNLRDFANKKLTVRFQLVLKTKNTIIMGF
Ga0184626_100638322	3300018053	Groundwater Sediment	MIGTLVKLLPEPQHLNAKGKPVPLSSNEWRIESVGYKLVVLKNGQTGHSLTLGETNLRDFANKKLTVRFQLVLKTKNTIIMGF
Ga0184623_100246003	3300018056	Groundwater Sediment	MSMSVEQLQPMIGARIKLLPEPEHLNAKGKPVPLSSNEWRIESVGYKLVVLKNGQTGHSLTLGESNIRDFDNKKLTVRFKLVLKTKNTIIMGF
Ga0184632_103033641	3300018075	Groundwater Sediment	QPMIGTLVKLLPEPQHLNAKGKPVPLSSNEWRIESVGYKLVVLKNGQTGHSLTLGETNLRDFANKKLTVRFQLVLKTKNTIIMGF
Ga0066667_100459502	3300018433	Grasslands Soil	MNVEQLQTVVGALVKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIMGI
Ga0184646_11640512	3300019259	Groundwater Sediment	MIGALVKLLPEPQHLNAKGKPVPMSSNEWRIESVGYKLVVLKNGQTGHSLTLGETNLRDFANKKLTVRFQLVLKTKNTIIMGF
Ga0207684_1000121828	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MIGTLVKLLPEPQHLNAKGKPVPLSSNEWRIESVGYKLVVLKNGQTGHSLTLGETNIRDFNNKRLTVRFQLVLKTKNTIIMGF
Ga0207684_112492862	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MNVEQLQPMVGAVIKLLPEPEHLNAKRKPVPLHSNEWHIESVGYKFVVLKNGQTGHSVTLGESNIRKFENKKMTVCFKLVLKTKNTVIVGF
Ga0209235_10211724	3300026296	Grasslands Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLHSNEWRIESVGYKLVVLKNEQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF
Ga0209235_10244375	3300026296	Grasslands Soil	MNVEQLQTMVGAQIKLLPEPEHLNAKGKSVPLRSNEWRIESVGHKLVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKHTVIVGF
Ga0209235_10494514	3300026296	Grasslands Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKIVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKNTVIVGF
Ga0209237_10769244	3300026297	Grasslands Soil	MVGALIKLLPEPEHLNAKGKSVPLHSNEWRIESVGYKLVVLKNEQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF
Ga0209237_10886773	3300026297	Grasslands Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLHSNEWRIESVGYKIVVLKNGQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTV
Ga0209236_10558941	3300026298	Grasslands Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLHSNEWRIESVGYKIVVLKNGQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF
Ga0209236_11771852	3300026298	Grasslands Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGHKLVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKHTVIVGF
Ga0209239_13138132	3300026310	Grasslands Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLHSNEWRIESVGYKLVVLKNEQTGHSLTLGESNIRRLDSKKLTLCFKLVLKTKNTVIVGF
Ga0209761_10893142	3300026313	Grasslands Soil	MNVEQLQTMVGAQIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNGQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTV
Ga0209471_12735562	3300026318	Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKLVPLSSNEWRIESVGYKLVVLKNEQTGHSLTLGESNIRRFDSKKLT
Ga0209152_101750931	3300026325	Soil	MNVEQLQTVVGALVKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNT
Ga0209801_10580882	3300026326	Soil	MNVEQLQTMVGAQIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNGQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF
Ga0209801_13210941	3300026326	Soil	MNVEQLQTVVGALIKLLPEPEHLNAKGKSVPLRSNEWRIQSVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIMGI
Ga0209266_12413911	3300026327	Soil	MNVEQLQTVVGALVKLLPEPEHLNAKGKSVPLRSNEWRIQSVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIMGI
Ga0209267_11317402	3300026331	Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNEQTGHSLTLGESNIRRFERKIMTVCFKLVLKTKNTVIMGI
Ga0209803_10134744	3300026332	Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKIVVLKNGQTGHSLTLGESNIRRFDSKKLTLCFKLVLKTKNTVIVGF
Ga0209803_12766521	3300026332	Soil	SNEWRIESVGYKFVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKHTVIVGF
Ga0209377_11594742	3300026334	Soil	MNVEQLQTMVGAQIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKHTVIVGF
Ga0209378_10499331	3300026528	Soil	MNVEQLQTVVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKFVVLKNGQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKNTVIVGF
Ga0209806_100291910	3300026529	Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKLVPLSSNEWRIESVGYKLVVLKNGQTGHSLTLGESNIRTFEGKKLTVCFKLVLKTKNTVIMGI
Ga0209160_11140363	3300026532	Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLHSNEWRIESVGYKLVVLKNEQTGHSLTLGESNIRRFDSKKLTLC
Ga0209180_101125022	3300027846	Vadose Zone Soil	MSMSVEQLQPMIGTLVRLLPEPEHLNAKGKPVPLSPNEWRIESVGYKLVVLKNGQTGHSLTLGETNIRDFDNKKLTVRFKLVLKTKNTIIMGF
Ga0209590_110083992	3300027882	Vadose Zone Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGKSVPLRSNEWRIESVGYKLVVLKNEQTGHSLTLGESNIRRFERKTMTVCFKLVLKTKNTVIVGF
Ga0307471_1004518112	3300032180	Hardwood Forest Soil	MIGSLVKLLPEPEHLNAKGKPVPLSSNEWRIESVGYKLVVLKNGQTGHSLTLGETNLRDFTNKKLTVRFKLVLKTKNTIIMGF
Ga0307471_1008506332	3300032180	Hardwood Forest Soil	MNVEQLQTMVGALIKLLPEPEHLNAKGRLVPLSSNEWRIESVGYKLVVLKNGQTGHSLTLGESNIRKFESRKLTICFKLVLKTKNTVIMGF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102970

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences