Metagenome Family F087483

Basic Information
Family ID	F087483
Family Type	Metagenome
Number of Sequences	110
Average Sequence Length	45 residues
Representative Sequence	IARQGGQHVLYGSALALAAALQAWSRHAGTPLIDLARTVIR
Number of Associated Samples	96
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.91 %
% of genes near scaffold ends (potentially truncated)	96.36 %
% of genes from short scaffolds (< 2000 bps)	84.55 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Most Common Taxonomy
Group	Bacteria (62.727 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.818 % of family members)
Environment Ontology (ENVO)	Unclassified (37.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (41.818 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 50.72% β-sheet: 0.00% Coil/Unstructured: 49.28%
Feature Viewer

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Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01695	IstB_IS21	9.09
PF08751	TrwC	2.73
PF13604	AAA_30	2.73
PF08281	Sigma70_r4_2	1.82
PF01209	Ubie_methyltran	1.82
PF00665	rve	1.82
PF13683	rve_3	1.82
PF13676	TIR_2	1.82
PF04851	ResIII	0.91
PF01979	Amidohydro_1	0.91
PF00583	Acetyltransf_1	0.91
PF00400	WD40	0.91
PF03050	DDE_Tnp_IS66	0.91
PF01243	Putative_PNPOx	0.91
PF03824	NicO	0.91
PF02371	Transposase_20	0.91
PF12728	HTH_17	0.91
PF13006	Nterm_IS4	0.91
PF02803	Thiolase_C	0.91
PF13613	HTH_Tnp_4	0.91
PF13546	DDE_5	0.91
PF13271	DUF4062	0.91
PF07676	PD40	0.91
PF12762	DDE_Tnp_IS1595	0.91
PF10282	Lactonase	0.91
PF13649	Methyltransf_25	0.91
PF08044	DUF1707	0.91
PF13374	TPR_10	0.91
PF07883	Cupin_2	0.91
PF08241	Methyltransf_11	0.91
PF07690	MFS_1	0.91
PF01266	DAO	0.91
PF02467	Whib	0.91
PF03807	F420_oxidored	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	9.09
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	1.82
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	1.82
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	1.82
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	1.82
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	1.82
COG4584	Transposase	Mobilome: prophages, transposons [X]	1.82
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.91
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.91
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.73 %
Unclassified	root	N/A	37.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.73 %
Unclassified	root	N/A	37.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.73 %
Unclassified	root	N/A	37.27 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	52.73 %
Unclassified	root	N/A	37.27 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50.91 %
Unclassified	root	N/A	37.27 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	40.00 %
Unclassified	root	N/A	37.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.27 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.73 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.73 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.82 %
Jatrophihabitantales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales	0.91 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	0.91 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.91 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.91 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.91 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.27 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.82 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.82 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.82 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Jatrophihabitantaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae	0.91 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	0.91 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.91 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.91 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.91 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.91 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.27 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	1.82 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.82 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.82 %
Jatrophihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans	0.91 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.91 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.91 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.91 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.91 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.27 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.82 %
Amycolatopsis tolypomycina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis tolypomycina	0.91 %
Nakamurella panacisegetis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella panacisegetis	0.91 %
Streptomyces humicola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces humicola	0.91 %
unclassified Jatrophihabitans	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → unclassified Jatrophihabitans	0.91 %
unclassified Actinomadura	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura	0.91 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.91 %
Mycobacterium kansasii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kansasii	0.91 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.91 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.27 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.82 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.82 %
Jatrophihabitans sp. GAS493	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → unclassified Jatrophihabitans → Jatrophihabitans sp. GAS493	0.91 %
Actinomadura sp. HBU206391	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. HBU206391	0.91 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.91 %
Amycolatopsis tolypomycina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis tolypomycina	0.91 %
Nakamurella panacisegetis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella panacisegetis	0.91 %
Streptomyces humicola	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces humicola	0.91 %
Mycobacterium kansasii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kansasii	0.91 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.91 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.91 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.91 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.91 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_118565032	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300004268\|Ga0066398_10091445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	692	Open in IMG/M
3300004479\|Ga0062595_101566046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	612	Open in IMG/M
3300005179\|Ga0066684_10262513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1137	Open in IMG/M
3300005439\|Ga0070711_100303239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1271	Open in IMG/M
3300005468\|Ga0070707_101514619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	637	Open in IMG/M
3300005554\|Ga0066661_10246936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1105	Open in IMG/M
3300005559\|Ga0066700_10032236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3077	Open in IMG/M
3300005614\|Ga0068856_100276583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1695	Open in IMG/M
3300006046\|Ga0066652_100015730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium kansasii	5043	Open in IMG/M
3300006176\|Ga0070765_101474692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	640	Open in IMG/M
3300006176\|Ga0070765_101582214	Not Available	616	Open in IMG/M
3300009137\|Ga0066709_100857478	Not Available	1321	Open in IMG/M
3300009521\|Ga0116222_1536786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jatrophihabitantales → Jatrophihabitantaceae → Jatrophihabitans → unclassified Jatrophihabitans → Jatrophihabitans sp. GAS493	513	Open in IMG/M
3300009522\|Ga0116218_1507215	Not Available	538	Open in IMG/M
3300009524\|Ga0116225_1541030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	517	Open in IMG/M
3300009525\|Ga0116220_10530784	Not Available	536	Open in IMG/M
3300010041\|Ga0126312_11247408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	549	Open in IMG/M
3300010048\|Ga0126373_10099509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2686	Open in IMG/M
3300010326\|Ga0134065_10172892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	767	Open in IMG/M
3300010361\|Ga0126378_11585686	All Organisms → cellular organisms → Bacteria → Terrabacteria group	743	Open in IMG/M
3300010362\|Ga0126377_11882737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300010366\|Ga0126379_12337966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	634	Open in IMG/M
3300010379\|Ga0136449_103412668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	608	Open in IMG/M
3300010379\|Ga0136449_103739401	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300012206\|Ga0137380_10031520	Not Available	4887	Open in IMG/M
3300012206\|Ga0137380_11750598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300012207\|Ga0137381_10653454	Not Available	915	Open in IMG/M
3300012349\|Ga0137387_10086809	Not Available	2161	Open in IMG/M
3300012349\|Ga0137387_10383666	Not Available	1018	Open in IMG/M
3300012351\|Ga0137386_10119453	Not Available	1875	Open in IMG/M
3300012359\|Ga0137385_10026618	Not Available	5183	Open in IMG/M
3300012359\|Ga0137385_11287246	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300012362\|Ga0137361_11215218	Not Available	677	Open in IMG/M
3300014493\|Ga0182016_10163376	All Organisms → cellular organisms → Bacteria	1481	Open in IMG/M
3300014838\|Ga0182030_10276193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1885	Open in IMG/M
3300015245\|Ga0137409_11087710	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300015356\|Ga0134073_10221796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	638	Open in IMG/M
3300016404\|Ga0182037_10210563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1514	Open in IMG/M
3300016404\|Ga0182037_11166405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella panacisegetis	676	Open in IMG/M
3300017924\|Ga0187820_1107445	Not Available	808	Open in IMG/M
3300017946\|Ga0187879_10852138	Not Available	509	Open in IMG/M
3300017999\|Ga0187767_10009881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1846	Open in IMG/M
3300017999\|Ga0187767_10173730	All Organisms → cellular organisms → Bacteria → Terrabacteria group	662	Open in IMG/M
3300018001\|Ga0187815_10321816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	656	Open in IMG/M
3300018007\|Ga0187805_10215879	Not Available	877	Open in IMG/M
3300018018\|Ga0187886_1214104	Not Available	738	Open in IMG/M
3300018025\|Ga0187885_10219957	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300018034\|Ga0187863_10535559	Not Available	657	Open in IMG/M
3300018047\|Ga0187859_10494701	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300018057\|Ga0187858_10645169	Not Available	635	Open in IMG/M
3300026530\|Ga0209807_1029633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis tolypomycina	2634	Open in IMG/M
3300026538\|Ga0209056_10068590	Not Available	3057	Open in IMG/M
3300026552\|Ga0209577_10612761	Not Available	646	Open in IMG/M
3300026908\|Ga0207787_1001534	All Organisms → cellular organisms → Bacteria	2884	Open in IMG/M
3300027817\|Ga0209112_10004328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3751	Open in IMG/M
3300028801\|Ga0302226_10036244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2444	Open in IMG/M
3300028808\|Ga0302228_10035162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2480	Open in IMG/M
3300030007\|Ga0311338_10263772	All Organisms → cellular organisms → Bacteria	1927	Open in IMG/M
3300030057\|Ga0302176_10077994	Not Available	1283	Open in IMG/M
3300030737\|Ga0302310_10727279	Not Available	514	Open in IMG/M
3300031525\|Ga0302326_10951653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1213	Open in IMG/M
3300031543\|Ga0318516_10587968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300031544\|Ga0318534_10075676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1909	Open in IMG/M
3300031546\|Ga0318538_10114484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1404	Open in IMG/M
3300031546\|Ga0318538_10389476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. HBU206391	754	Open in IMG/M
3300031546\|Ga0318538_10547590	Not Available	627	Open in IMG/M
3300031573\|Ga0310915_10542057	Not Available	826	Open in IMG/M
3300031640\|Ga0318555_10353514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	796	Open in IMG/M
3300031670\|Ga0307374_10061042	Not Available	3725	Open in IMG/M
3300031671\|Ga0307372_10088968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2552	Open in IMG/M
3300031680\|Ga0318574_10064189	Not Available	1966	Open in IMG/M
3300031682\|Ga0318560_10730340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300031708\|Ga0310686_101186235	Not Available	622	Open in IMG/M
3300031708\|Ga0310686_108549327	Not Available	519	Open in IMG/M
3300031736\|Ga0318501_10801668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	521	Open in IMG/M
3300031747\|Ga0318502_10183084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1207	Open in IMG/M
3300031747\|Ga0318502_10993354	Not Available	512	Open in IMG/M
3300031751\|Ga0318494_10172565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1224	Open in IMG/M
3300031770\|Ga0318521_11015424	Not Available	509	Open in IMG/M
3300031778\|Ga0318498_10428257	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300031782\|Ga0318552_10147580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1180	Open in IMG/M
3300031796\|Ga0318576_10277652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	791	Open in IMG/M
3300031797\|Ga0318550_10022025	Not Available	2655	Open in IMG/M
3300031805\|Ga0318497_10681006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300031819\|Ga0318568_11008946	Not Available	514	Open in IMG/M
3300031821\|Ga0318567_10292753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	917	Open in IMG/M
3300031880\|Ga0318544_10311991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	610	Open in IMG/M
3300031894\|Ga0318522_10031886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1788	Open in IMG/M
3300031910\|Ga0306923_11872897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	613	Open in IMG/M
3300031912\|Ga0306921_10332394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces humicola	1778	Open in IMG/M
3300031942\|Ga0310916_10773359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	810	Open in IMG/M
3300031954\|Ga0306926_10877039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1076	Open in IMG/M
3300031954\|Ga0306926_11063276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	959	Open in IMG/M
3300031996\|Ga0308176_11612017	Not Available	692	Open in IMG/M
3300032008\|Ga0318562_10532173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	680	Open in IMG/M
3300032009\|Ga0318563_10064735	Not Available	1892	Open in IMG/M
3300032035\|Ga0310911_10285757	Not Available	948	Open in IMG/M
3300032041\|Ga0318549_10257478	Not Available	785	Open in IMG/M
3300032041\|Ga0318549_10302685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300032052\|Ga0318506_10519559	Not Available	527	Open in IMG/M
3300032054\|Ga0318570_10605538	Not Available	500	Open in IMG/M
3300032065\|Ga0318513_10603912	Not Available	537	Open in IMG/M
3300032066\|Ga0318514_10333937	Not Available	802	Open in IMG/M
3300032089\|Ga0318525_10617963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	552	Open in IMG/M
3300032091\|Ga0318577_10522846	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300032180\|Ga0307471_102585811	Not Available	643	Open in IMG/M
3300032205\|Ga0307472_100064972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2351	Open in IMG/M
3300032805\|Ga0335078_10010646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13621	Open in IMG/M
3300032805\|Ga0335078_12719963	Not Available	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.09%
Host-Associated	Host-Associated	0.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.91%
Aquatic	Environmental → Aquatic	8.18%
Plants	Host-Associated → Plants	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.45%
Freshwater	Environmental → Aquatic → Freshwater	8.18%
Peat	Environmental → Terrestrial → Peat	5.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.91%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	71.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.18%
Loam	Environmental → Terrestrial → Soil → Loam	6.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.45%
Clay	Environmental → Terrestrial → Soil → Clay	1.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.91%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.18%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.64%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.82%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.27%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.45%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.45%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.64%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.82%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.82%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.82%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.82%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.82%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.91%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026908	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 77 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030057	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_1	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031671	Soil microbial communities from Risofladan, Vaasa, Finland - OX-1	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F087483

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1185650324	3300000956	Soil	LIARQGGKHVLYGSALTLAAAAQTWAANSDTPVRELARAAVR*
Ga0066398_100914452	3300004268	Tropical Forest Soil	SLIARQGGQHVLYGSALALAAALQAWSRHARTALPGLARTVIR*
Ga0062595_1015660461	3300004479	Soil	LDSLIARQGGQHVLYGSALAFAAAVQAWAAQTGTPVTDLARAAVR*
Ga0066684_102625133	3300005179	Soil	LALAGKGQAFLSLGPLIARQGGQHVLYGSALALTAAIRTWSNETGTPVPQLARTAIR*
Ga0070711_1003032393	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	IARQGGKHVLYGSALTLAATIQAWAAHTDTPASELARTAVR*
Ga0070707_1015146191	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LNTLITRQGGKHVLYGSALTLAAAIQTWATGTDTPVHDLVRAAVH*
Ga0066661_102469363	3300005554	Soil	SSLDTLIAKQGGKHVLHGAALTLAAAVQTWAADTNTPARDLARTALR*
Ga0066700_100322361	3300005559	Soil	KGRAFASLDALIARQGGQHVLYGSALALAAALQAWSRHAGTPLTDLARTVIR*
Ga0068856_1002765831	3300005614	Corn Rhizosphere	QGGKHVLYGSALTLAATIQAWAAHTDTPASELARTVVR*
Ga0066652_1000157301	3300006046	Soil	GGQHVLYGCAIVLAAALQAWARHAGTPLSNLARTVVG*
Ga0070765_1014746921	3300006176	Soil	MIRQGGQDVLYRSAPILARSLQAWARHADTPVIHL
Ga0070765_1015822141	3300006176	Soil	SLGTLIARQGGEQVLYGSALTLTAATQTWATRTRTPLGAITRAAVR*
Ga0066709_1008574781	3300009137	Grasslands Soil	LNRVIARQGGRHVLFGSALALTAAIQAWSDHGGDPVPDLARTAIR*
Ga0116222_15367861	3300009521	Peatlands Soil	NPLIARQGGRHVLYGSALPLAAALQAWSRHAGTPLTDLARTVIR*
Ga0116218_15072151	3300009522	Peatlands Soil	HVLYGSALALAAALQAWSRHAGTPLTDLARTTIR*
Ga0116225_15410301	3300009524	Peatlands Soil	RAFASLDSLIARQGGRHVLYGSALALAAALQAWSRHAGTPLTDLARTTIR*
Ga0116220_105307842	3300009525	Peatlands Soil	SLITRHGGRHVLYGSALALAAALQAWSRHAGTPLTDLARTTIR*
Ga0126312_112474083	3300010041	Serpentine Soil	LIARQGGRHVLYGSALALAAVIQTWSRSTGTPVPDLARTTIR*
Ga0126373_100995094	3300010048	Tropical Forest Soil	VTFGRQGGQHVLYDSALVLAATLQAWARHADTTVIDLARAVIR*
Ga0134065_101728921	3300010326	Grasslands Soil	IARQGGQHVLYGCAIVLAAALQAWARHAGTPLSNLARTVVG*
Ga0126378_115856861	3300010361	Tropical Forest Soil	QHVLYGSALTLTAALQAWSRHAGTPVPDLARGVIR*
Ga0126377_118827372	3300010362	Tropical Forest Soil	CKGRAFASLDPLIARQGGQHVLYGSVLALAAALQAWSQQAGTALIDLARTVIR*
Ga0126379_123379662	3300010366	Tropical Forest Soil	IARQGGKHVLYGSALTLAAAAQAWAANSDTPVRELARAAVR*
Ga0136449_1034126681	3300010379	Peatlands Soil	RQGGEHVLYGSALTLTAAAQTWAASTDTPIRELIQAKVR*
Ga0136449_1037394012	3300010379	Peatlands Soil	GRAFASLDALIARQGGQHVLYGSALVLAAALQAWARHADIPLIELARTAVR*
Ga0137380_100315206	3300012206	Vadose Zone Soil	AFASLDSLIVRQGGQHVLYGSALVLAAALQSWARHTETPLTGLARTVVR*
Ga0137380_117505981	3300012206	Vadose Zone Soil	AFASLDSLIVRQGGQHVLYGSALVLAAALQSWARHTETPLIDLARTVVR*
Ga0137381_106534541	3300012207	Vadose Zone Soil	RQGGRHVLYGSALALAAALQARARHAETPVIDLARTVIR*
Ga0137387_100868091	3300012349	Vadose Zone Soil	SLIVRQGGQHVLYGSALVLAAALQSWARHTETPLTGLARTVVR*
Ga0137387_103836662	3300012349	Vadose Zone Soil	DSLIARQGGRHVLYGSALALAAALQARARHAETPLIDLARTVIR*
Ga0137386_101194531	3300012351	Vadose Zone Soil	RQGGQHVLYGSALVLAAILQAWARHAGTPLNELARTVVR*
Ga0137385_100266181	3300012359	Vadose Zone Soil	FASLDSLIVRQGGQHVLYGSALVLAAALQSWARHTETPLTGLARTVVR*
Ga0137385_112872461	3300012359	Vadose Zone Soil	SLDSLIARQGGQHVLYCSALALAAALQAWSRHAGTPLIDLARTVIR*
Ga0137361_112152181	3300012362	Vadose Zone Soil	IVRQGGQHVLYGSALVLAAALQSWARHTETPLIDLARTVVR*
Ga0182016_101633763	3300014493	Bog	SLIARQGGRHVLYGSALTLAAALQAWSRHTGTPLIDLARTAIR*
Ga0182030_102761931	3300014838	Bog	GRHVLYGSALTLAAALQAWSRHTGTPLIDLARTALR*
Ga0137409_110877101	3300015245	Vadose Zone Soil	KCLPGRGGKHVLYGSTLTLAAATWTWAAGTDTPVRDLTCTAVR*
Ga0134073_102217962	3300015356	Grasslands Soil	LGPLIARQGGQHVLYGSALALTAAIRTWSNETGTPVPQLARTAIR*
Ga0182037_102105631	3300016404	Soil	HHLLYGSALALAAALQAWAAQTNTPVSDLAHAAVH
Ga0182037_111664051	3300016404	Soil	AFASLDSLIARQGGQHVLYGCAIVLGAALQAWARHAQTPLIDLARTIVR
Ga0187820_11074451	3300017924	Freshwater Sediment	FASLDALIARQGGQHVLYGSALILAAALQAWARHAGIPLIELARTVVR
Ga0187879_108521381	3300017946	Peatland	IARQGGQHVLYGSALALAAALQAWSRHAGTPLIDLARTVIR
Ga0187767_100098812	3300017999	Tropical Peatland	ARQGGQHVLYGSALALAAALRAWARHAGTPLIDLARTVIR
Ga0187767_101737301	3300017999	Tropical Peatland	RQGGQHVLYGSTLALTAALQAWSRHAGTPLIDLARTVIR
Ga0187815_103218161	3300018001	Freshwater Sediment	MHVLYGSALTLAATIQAWAAQTDTPVSDLARTAVR
Ga0187805_102158792	3300018007	Freshwater Sediment	ASLDTLIARQGGMHVLYGSALTLAATIQAWAAHTDTTVSHLARTAVR
Ga0187886_12141042	3300018018	Peatland	RAFASLNALIARQGGQHVLYGSALTLAAALQAWSQHAGTPLPELARMTIR
Ga0187885_102199572	3300018025	Peatland	ATDILTLARKRRAFASLDSLIARQGGRHVLYGSALALAAALQAWSRHAGTPLTDLARTVI
Ga0187863_105355592	3300018034	Peatland	GRHVLYGSALTLAAALQAWSRHAGTPLIDLARTAIR
Ga0187859_104947011	3300018047	Peatland	LDSLIARQGGRHVLYGSALALAAALQAWSRHAGTPLTDLARTVIR
Ga0187858_106451691	3300018057	Peatland	RAFASPDSLIARQGGRHVLYGSALTLAAALQAWSRHAGTPLIDLARTAIR
Ga0209807_10296331	3300026530	Soil	QLAGDILALAGKGQAFLSLGPLIARQGGQHVLYGSALALTAAIRTWSNETGTPVPQLARTAIR
Ga0209056_100685901	3300026538	Soil	LDTLIARQGGEHVLYGSALTLAAAAQTWAADSDTPVREVARAAVR
Ga0209577_106127611	3300026552	Soil	GQHVLYGSALALAAALQAWSRHAGTPLIDLARTVIR
Ga0207787_10015341	3300026908	Tropical Forest Soil	LIARQGGQHVLYGSALVLAAALQAWARHASTPLIELARTAVR
Ga0209112_100043281	3300027817	Forest Soil	VVASLDSLIARQGGQHVLYGSALALAAALQAWSRHAGTPLTDLARTIIR
Ga0302226_100362441	3300028801	Palsa	IARQGGRHVLYGSALTLAAALQAWSRHTGTPLIDLARTAIR
Ga0302228_100351621	3300028808	Palsa	DSLIARQGGRHVLYGSALTLAAALQAWSRHTGTPLIDLARTAIR
Ga0311338_102637722	3300030007	Palsa	SLDSLIARQGGQHVLYGSALALAAALQAWSRHAATPLTDLARTVIR
Ga0302176_100779942	3300030057	Palsa	QGGRHVLYGSALTLAAALQAWSRHTGTPLIDLARTAIR
Ga0302310_107272792	3300030737	Palsa	GRAFASLDSLIARQGGRHVLYGSALTLAAALQAWSRHTGTPLIDLARTALR
Ga0302326_109516531	3300031525	Palsa	LIARQGGRHVLYGSALTLAAALQAWSRHTGTPLIDLARTALR
Ga0318516_105879681	3300031543	Soil	RAFASLDTLIARQGGKHVLYGSALTLAAAAQTWAANTDTPVRELARAAVR
Ga0318534_100756761	3300031544	Soil	GRAFASLDSLIARQGGQHVLYGSALALAAALQAWAAQTGTPVSDLARTAVR
Ga0318538_101144842	3300031546	Soil	SLDSLIARQGGQHVLYGSALALAAALQAWAAQTGTPVSDLARTAVR
Ga0318538_103894763	3300031546	Soil	QHVLYGSALVLAAALQAWARHAGTPLIELARAVVR
Ga0318538_105475902	3300031546	Soil	AVEDVLAALALAAALQAWAAQTDTPVTDLARAAVR
Ga0310915_105420572	3300031573	Soil	GGQHVLYGSALVLAAALQAWARHAGTPLIELARAVVR
Ga0318555_103535141	3300031640	Soil	LIARQGGQHVLYGSALALTAALQAWSRHAGTPVPDLARGIIR
Ga0307374_100610423	3300031670	Soil	VQQLTSWSWPGRGRCFRSLDTLIARQGGKHVLYGSALALAAVTQAWTASTGEPTAELVRGIVR
Ga0307372_100889685	3300031671	Soil	TRQGGEHVLYGSALALAAATQAWSASTGEPASDLVRAIVR
Ga0318574_100641891	3300031680	Soil	QGGQHVLYGSALALAAALQAWAAQTDTPVTDLARAAVR
Ga0318560_107303402	3300031682	Soil	GMHVLYGSALTLAATTQAWAAQTNTPVSDLARTAIR
Ga0310686_1011862351	3300031708	Soil	KGRAFASLDSLIARQGGQHVLYGSALALAAALQAWSRHAGTPLIDLARTVIR
Ga0310686_1085493271	3300031708	Soil	GRAFASLDSLIARQGGQHVLYGSALALAAALQAWSRHAGTPLIDLARTVIR
Ga0318501_108016681	3300031736	Soil	AFASLDSLIARQGGQHVLYGSALALAAALQAWAAQTDTPVTDLARAAVR
Ga0318502_101830841	3300031747	Soil	GGKHVLYGSALTLAAAAQTWAANTDTPVRELARAAVR
Ga0318502_109933541	3300031747	Soil	ASLDTLIARQGGKHVLYGSALTLAAAAQTWAANSDTPVRELARAAVR
Ga0318494_101725652	3300031751	Soil	GRHVLYGSALALAAALQPWARHAGTPLTELARTAIR
Ga0318521_110154241	3300031770	Soil	GRAFASLDALIARPGGRHVLYGSALGLAAALQAWARHAGSPLTELARTVVR
Ga0318498_104282572	3300031778	Soil	GRAFASLDALIARQGGQHVLYGSALVLAAALQAWARHAGTPLIEIARTVVR
Ga0318552_101475802	3300031782	Soil	FASLDSLIARQGGQHVLYGSALALAAALQAWAAQTDTPVTDLARAAVR
Ga0318576_102776521	3300031796	Soil	AIDALIARQGGQHVLYGSALALAAALQAWSRHAGTPVPDLARSTIR
Ga0318550_100220252	3300031797	Soil	EGGQHVLYGSALALAAALQAWAAQTDTPVTDLARAAVR
Ga0318497_106810061	3300031805	Soil	LDSLIARQGGQHVLYGSALALAAALQAWSRHAGTSLIDLARNIIR
Ga0318568_110089461	3300031819	Soil	KHVLYGSALTLAAAIQAWAAQTDTPVSDLARTTVR
Ga0318567_102927532	3300031821	Soil	EGQGGQHVLYGSALALAAALQAWAAQTDTPVTDLARAAVR
Ga0318544_103119912	3300031880	Soil	AFASLDSLIARQGGQHVLYGSALALAAALQAWAAQTGTPVSDLARTAVR
Ga0318522_100318861	3300031894	Soil	KGRAFAALDSLIARQGGQHVLYGSALALAAALQAWAAQTDTPVTDLARAAVR
Ga0306923_118728971	3300031910	Soil	ILTLARKRRAFASLDALIARQGGRHVLYGSALALAAALQPWARHAGTPLTELARTAIR
Ga0306921_103323941	3300031912	Soil	GGQHVLYGSALALAAALQAWSRHAGTPVPDLARSTIR
Ga0310916_107733591	3300031942	Soil	KGRAFASLDALIARQGGRHVLYGSALVLAAALQAWARHAGSPLTELARTVVR
Ga0306926_108770392	3300031954	Soil	GKHVLYGSALTLAATIQAWAAQTDTPVSDLARTTVR
Ga0306926_110632761	3300031954	Soil	SLIARQGGQHVLYGSALALAAALRAWAAQTGTPVSDLARAAVR
Ga0308176_116120171	3300031996	Soil	GGQHVLYGSALALAAALQAWARHAGTPLTELARTAIR
Ga0318562_105321731	3300032008	Soil	RAFASLDSLIARQGGQHVLYGSALALAAALQAWAAQTGTPVSDLARTAVR
Ga0318563_100647353	3300032009	Soil	ILTLAHKGRAFASLDSLIARQGGHHVLYGSALALAAALQAWAVQTDTPVSDLARAAVR
Ga0310911_102857571	3300032035	Soil	ARQGGQHVLYGSALALAAALQAWAAQTGTPVSDLARTAVR
Ga0318549_102574782	3300032041	Soil	KGRAFASLDSLIARQGGQHVLYGSALALAAALQAWAAQTGTPVSDLARTAVR
Ga0318549_103026852	3300032041	Soil	LDSLIARQGGQHVLYGSALALAAALQAWAAQTDTPVTDLARAAVR
Ga0318506_105195591	3300032052	Soil	LTLAHKGRAFASLDSLIARQGGHHVLYGSALALAAALQAWAAQTDTPVTDLARAAVR
Ga0318570_106055381	3300032054	Soil	LAHKGRAFASLDSLIARQGGHHVLYGSALALAAALQAWAVQTDTPVSDLARAAVR
Ga0318513_106039121	3300032065	Soil	GKGRAFSSLDALIARQGGQHVLYGSALALTAALQAWSRHAGTPVPDLARGIIR
Ga0318514_103339371	3300032066	Soil	GEDVGGRAFASLDSLIARQGGQHVLYGSALALAAALQAWSRHAGTSLIDLARTIIR
Ga0318525_106179631	3300032089	Soil	SLDSLIGRQGGQHVLYGSALALAAALQAWAAQTGTPVSDLARTAVR
Ga0318577_105228462	3300032091	Soil	ASLDALIARQGGRHVLYGSALALAAALQAWARHAGTPLTELARTAIR
Ga0307471_1025858111	3300032180	Hardwood Forest Soil	RASASLGTLIARQGGKHVLYGSALTLAATIQAWAAHTDTPASELARTAVR
Ga0307472_1000649721	3300032205	Hardwood Forest Soil	KGRAFASLDALIARQGGQHVLYGSALALAAALQAWSRHAGTPFIDLARTVIR
Ga0335078_1001064612	3300032805	Soil	MARQGGQQVLYGSALALAATLQAWSRHAGTPIVDLARTVIR
Ga0335078_127199631	3300032805	Soil	RQGGQHVLYGSALALAAALQAWSRHAGTPLPDLARMTIR

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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