Metagenome Family F083018

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083018
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	104 residues
Representative Sequence	VGTIRGWFWGFVFVAMAVCFYWLGPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEFRAIRPGESDPNQRFDSVLISWVKKSD
Number of Associated Samples	74
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	52.21 %
% of genes near scaffold ends (potentially truncated)	40.71 %
% of genes from short scaffolds (< 2000 bps)	90.27 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (74.336 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.009 % of family members)
Environment Ontology (ENVO)	Unclassified (42.478 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.372 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 16.41% β-sheet: 25.00% Coil/Unstructured: 58.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00072	Response_reg	12.39
PF04392	ABC_sub_bind	1.77
PF07045	DUF1330	1.77
PF00550	PP-binding	0.88
PF00248	Aldo_ket_red	0.88
PF13676	TIR_2	0.88
PF05532	CsbD	0.88
PF01272	GreA_GreB	0.88
PF00982	Glyco_transf_20	0.88
PF12770	CHAT	0.88
PF01068	DNA_ligase_A_M	0.88
PF00036	EF-hand_1	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.77
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	1.77
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.88
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.88
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.88
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.88
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.34 %
All Organisms	root	All Organisms	25.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.34 %
cellular organisms	root	All Organisms → cellular organisms	25.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.34 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.34 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.85 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.65 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.65 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.88 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.88 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.65 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.88 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.88 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.65 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.88 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.88 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.88 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.34 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.65 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	0.88 %
Rhizobiales bacterium GAS188	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	0.88 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.88 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1097184	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300001867\|JGI12627J18819_10337046	Not Available	609	Open in IMG/M
3300005332\|Ga0066388_100228768	Not Available	2491	Open in IMG/M
3300005332\|Ga0066388_101179627	Not Available	1306	Open in IMG/M
3300005332\|Ga0066388_101365914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS188	1227	Open in IMG/M
3300005332\|Ga0066388_101865143	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300005332\|Ga0066388_105375127	Not Available	649	Open in IMG/M
3300005332\|Ga0066388_105523797	Not Available	640	Open in IMG/M
3300005536\|Ga0070697_100269196	Not Available	1460	Open in IMG/M
3300005587\|Ga0066654_10774870	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300005713\|Ga0066905_101511642	Not Available	612	Open in IMG/M
3300005764\|Ga0066903_100083672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4186	Open in IMG/M
3300005764\|Ga0066903_100496010	Not Available	2066	Open in IMG/M
3300005764\|Ga0066903_102859826	Not Available	936	Open in IMG/M
3300005764\|Ga0066903_103080957	Not Available	902	Open in IMG/M
3300005764\|Ga0066903_104692734	Not Available	727	Open in IMG/M
3300006041\|Ga0075023_100296043	Not Available	665	Open in IMG/M
3300006059\|Ga0075017_100666105	Not Available	799	Open in IMG/M
3300006175\|Ga0070712_101649938	Not Available	561	Open in IMG/M
3300006791\|Ga0066653_10637748	Not Available	544	Open in IMG/M
3300006806\|Ga0079220_10065353	Not Available	1772	Open in IMG/M
3300006806\|Ga0079220_11847040	Not Available	534	Open in IMG/M
3300006954\|Ga0079219_10445284	Not Available	881	Open in IMG/M
3300010046\|Ga0126384_10101962	Not Available	2120	Open in IMG/M
3300010046\|Ga0126384_10505100	Not Available	1043	Open in IMG/M
3300010048\|Ga0126373_10054097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3576	Open in IMG/M
3300010048\|Ga0126373_10076191	Not Available	3043	Open in IMG/M
3300010048\|Ga0126373_10748777	Not Available	1037	Open in IMG/M
3300010048\|Ga0126373_10992371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	905	Open in IMG/M
3300010358\|Ga0126370_10673858	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300010358\|Ga0126370_11647968	Not Available	615	Open in IMG/M
3300010359\|Ga0126376_11298397	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300010359\|Ga0126376_11448226	Not Available	713	Open in IMG/M
3300010359\|Ga0126376_12224413	Not Available	593	Open in IMG/M
3300010360\|Ga0126372_10916779	Not Available	880	Open in IMG/M
3300010361\|Ga0126378_10924503	Not Available	978	Open in IMG/M
3300010361\|Ga0126378_12757625	Not Available	561	Open in IMG/M
3300010362\|Ga0126377_11525856	Not Available	742	Open in IMG/M
3300010366\|Ga0126379_11956876	Not Available	689	Open in IMG/M
3300010366\|Ga0126379_13429018	Not Available	531	Open in IMG/M
3300010366\|Ga0126379_13602139	Not Available	519	Open in IMG/M
3300010376\|Ga0126381_100215492	Not Available	2577	Open in IMG/M
3300010376\|Ga0126381_103060563	Not Available	663	Open in IMG/M
3300010376\|Ga0126381_103996153	Not Available	574	Open in IMG/M
3300010376\|Ga0126381_104223741	Not Available	557	Open in IMG/M
3300016270\|Ga0182036_11565442	Not Available	554	Open in IMG/M
3300016270\|Ga0182036_11706510	Not Available	532	Open in IMG/M
3300016294\|Ga0182041_10233627	Not Available	1486	Open in IMG/M
3300016319\|Ga0182033_10330141	Not Available	1269	Open in IMG/M
3300016319\|Ga0182033_11178908	Not Available	686	Open in IMG/M
3300016357\|Ga0182032_10577599	Not Available	933	Open in IMG/M
3300016357\|Ga0182032_10926418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	741	Open in IMG/M
3300016371\|Ga0182034_10226308	Not Available	1461	Open in IMG/M
3300016387\|Ga0182040_11714836	Not Available	536	Open in IMG/M
3300016404\|Ga0182037_10410708	Not Available	1117	Open in IMG/M
3300016404\|Ga0182037_10794366	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300016422\|Ga0182039_10405014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1159	Open in IMG/M
3300016445\|Ga0182038_11843881	Not Available	546	Open in IMG/M
3300017823\|Ga0187818_10052586	Not Available	1751	Open in IMG/M
3300017924\|Ga0187820_1048970	Not Available	1138	Open in IMG/M
3300017928\|Ga0187806_1034417	Not Available	1507	Open in IMG/M
3300017933\|Ga0187801_10217501	Not Available	760	Open in IMG/M
3300017943\|Ga0187819_10027752	All Organisms → cellular organisms → Bacteria	3327	Open in IMG/M
3300017993\|Ga0187823_10016008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1837	Open in IMG/M
3300018482\|Ga0066669_12308592	Not Available	513	Open in IMG/M
3300020581\|Ga0210399_10176107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1775	Open in IMG/M
3300021420\|Ga0210394_10125901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2220	Open in IMG/M
3300021420\|Ga0210394_10547333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1018	Open in IMG/M
3300021560\|Ga0126371_10517274	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300021560\|Ga0126371_13315890	Not Available	544	Open in IMG/M
3300027050\|Ga0209325_1009916	Not Available	1059	Open in IMG/M
3300027090\|Ga0208604_1012637	Not Available	803	Open in IMG/M
3300027898\|Ga0209067_10391412	Not Available	777	Open in IMG/M
3300027910\|Ga0209583_10381032	Not Available	666	Open in IMG/M
3300027911\|Ga0209698_11281614	Not Available	537	Open in IMG/M
3300031474\|Ga0170818_111267079	Not Available	1322	Open in IMG/M
3300031543\|Ga0318516_10205082	Not Available	1139	Open in IMG/M
3300031545\|Ga0318541_10610614	Not Available	610	Open in IMG/M
3300031573\|Ga0310915_10223687	Not Available	1320	Open in IMG/M
3300031573\|Ga0310915_10434859	Not Available	932	Open in IMG/M
3300031668\|Ga0318542_10410533	Not Available	700	Open in IMG/M
3300031682\|Ga0318560_10817419	Not Available	503	Open in IMG/M
3300031718\|Ga0307474_11502296	Not Available	530	Open in IMG/M
3300031719\|Ga0306917_10227539	Not Available	1422	Open in IMG/M
3300031744\|Ga0306918_10561699	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300031753\|Ga0307477_10765733	Not Available	643	Open in IMG/M
3300031754\|Ga0307475_10572210	Not Available	905	Open in IMG/M
3300031795\|Ga0318557_10607124	Not Available	502	Open in IMG/M
3300031820\|Ga0307473_10057544	Not Available	1880	Open in IMG/M
3300031833\|Ga0310917_10175116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1427	Open in IMG/M
3300031890\|Ga0306925_10406664	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300031910\|Ga0306923_10929663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	950	Open in IMG/M
3300031910\|Ga0306923_11898466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300031912\|Ga0306921_11400095	Not Available	769	Open in IMG/M
3300031941\|Ga0310912_10196909	Not Available	1539	Open in IMG/M
3300031941\|Ga0310912_10417366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1045	Open in IMG/M
3300031942\|Ga0310916_10894602	Not Available	745	Open in IMG/M
3300031942\|Ga0310916_11168258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	637	Open in IMG/M
3300031945\|Ga0310913_10837249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300031947\|Ga0310909_10054580	Not Available	3083	Open in IMG/M
3300031947\|Ga0310909_10244382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1499	Open in IMG/M
3300031947\|Ga0310909_10686964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	851	Open in IMG/M
3300031954\|Ga0306926_11695083	Not Available	721	Open in IMG/M
3300031962\|Ga0307479_10113074	All Organisms → cellular organisms → Bacteria → Proteobacteria	2642	Open in IMG/M
3300032001\|Ga0306922_11010199	Not Available	858	Open in IMG/M
3300032059\|Ga0318533_10197332	Not Available	1440	Open in IMG/M
3300032059\|Ga0318533_11255077	Not Available	542	Open in IMG/M
3300032076\|Ga0306924_10793870	Not Available	1056	Open in IMG/M
3300032076\|Ga0306924_11605503	Not Available	685	Open in IMG/M
3300032076\|Ga0306924_11635488	Not Available	677	Open in IMG/M
3300032205\|Ga0307472_100152907	Not Available	1689	Open in IMG/M
3300032261\|Ga0306920_101164165	Not Available	1116	Open in IMG/M
3300032261\|Ga0306920_101776012	Not Available	871	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.27%
Aquatic	Environmental → Aquatic	9.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.27%
Freshwater	Environmental → Aquatic → Freshwater	5.31%
Sediment	Environmental → Aquatic → Sediment	4.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.22%
Loam	Environmental → Terrestrial → Soil → Loam	15.04%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.42%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	48.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.27%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.01%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.62%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.31%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10971842	3300000655	Forest Soil	VGTIKGWILCSIFVVIFAYIFWVGPNVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHAKGVREIHPGAGDPNEQFDSVLISWIKKSD*
JGI12627J18819_103370462	3300001867	Forest Soil	VGTIRGWFWGFVLVAIAACSYWLGPGVYSIKYAVSADKIYVDPKPADCDFWHAPVGKKGCHYQRIVIARDAKEVRKIRPGESDPNERFDSILISWVKKSD*
Ga0066388_1002287683	3300005332	Tropical Forest Soil	VGTIRGWIWASVFVAITACFYWVGPSVYSIKYALSADKIYLDPKPPDCDFWHTPVGNKGCRYQNVVIARDGKDVREIRRGDGDPNRRFDSVVISWVKKSD*
Ga0066388_1011796273	3300005332	Tropical Forest Soil	VGTIRRWIWAAVFVAITACFSRVGPSVYSIKYALSADKIYLDPKPPDCDFWHAPVGNKGCHYQSVVIARDAKEVREIRRGDGDPNRRFDSVLISWVKKSD*
Ga0066388_1013659143	3300005332	Tropical Forest Soil	VGTIRGWFWGFVFVAMAACFYWLGPSVYSIKYAVSADKIYIDPKPTDCDFWHAPVGKKGCHYQRIVIARDAREVRAMRPGESDPSQRFDSVLISWVKKSD*
Ga0066388_1018651432	3300005332	Tropical Forest Soil	VGTIKGWIRYSIFLAIFACIYWVGPSVYSIKYAVSADKIYLDQKPRDCDFWRAPLGTKGCHYQRVVIAQHAKEIRQIRPGEGDPNEQFDSVLITWVKKSD*
Ga0066388_1053751272	3300005332	Tropical Forest Soil	SWSGYLYRPNGVGMVALAQTGNPLIRVWPRERLTSDRALNPEFVGHRGDNVGTIRGWFWGFVFVAMAACFYWLGPSVYSIKYAVSAEKIYVDPKPTDCDFWHAPLGRKGCHYQRVVIARYAREIREIRPGESDPNERFDSVLISWVKKSN*
Ga0066388_1055237971	3300005332	Tropical Forest Soil	VASRRLTSDRALTPEFVRAEGGNVGTIRGWFWGFVFVAMAVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHTPVGKKGCHYQRVVIARDAKEVRAIRPGESDPNQRFDSVLISWVKKS
Ga0070697_1002691964	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VGTIRGWIRVSFFVAITACFYWFGPSVYSIKYAVSADKIYLDPKPPDCDFWHAPVGNKGCHYQSVVIARDAKDVREIRPGEGDPNRRYDSVLISWVKKSD*
Ga0066654_107748702	3300005587	Soil	GDNVGTIKGWIRCSIFLAGFGCICWFGPSVYSIKYAVSAQKIYLDPKPKDCDFWRVPLGMKRCHYQRVVIAQYAKGVREVRPGEGNPSEQFDSVLISWVKKSD*
Ga0066905_1015116421	3300005713	Tropical Forest Soil	VDLEPPHFRQSFDPRIQNRAEGGNVGTIRGWIRGAVFVAIGVCFYWFGPSVYSIKYAVSADKIYVDSKPIDCDFWHAPLGKKGCHYQRVVIARSAKGIREIRPGETDPDVRYDSVRISWVKKSD*
Ga0066903_1000836722	3300005764	Tropical Forest Soil	VGTIKGWILCSIFVVIFAYIFWVGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCRYQRVVIAQHAKGVRETHPGAGDPNEQFDSVLISWIKKSD*
Ga0066903_1004960101	3300005764	Tropical Forest Soil	VGTIRGWFWGFVFVAMAACFYWLGPSVYSIKYAVSADKIYIDPKPTDCDFWHAPVGKKGCHYQRIVIARDAKEVRALRPGERDPN*
Ga0066903_1028598261	3300005764	Tropical Forest Soil	LRTIRGWFWGFVFVAMAACFYWLEPSVYSIKYAVSADKIYIDPKPTDCDFWHAPVSKKGCHYQRIVIGRDAKEVRAIRPGESDPNQRFDSLLISWVKKSD*
Ga0066903_1030809572	3300005764	Tropical Forest Soil	VGTIKGWILCSIFVVIFACIFWVGPSVYAIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHATGVREIHPGAGDPNEQFDSVLISWIKKSD*
Ga0066903_1046927342	3300005764	Tropical Forest Soil	VSTIRGWIWGLVVVAIFACVYWVGPIVYAVSADKIYVDPKPTDCDFWSRPLGKKGCHYQRVVIARYAKWIREIRPGESDPNERFDSVLISWVKKSD*
Ga0075023_1002960431	3300006041	Watersheds	FWGFVLVAIAACSYWLGPGVYSIKYAVSADKIYVDPKPADCDFWHAPVGKKGCHYQRIVIARDAKEVRKIRPGESDPNERFDSILISWVKKSD*
Ga0075017_1006661052	3300006059	Watersheds	MATCFYWVGPSVYSIKYAVSADKIYVDPKPTDCDFWHAPLGKKGCHYQRVVIARYAKGIREIRPGEGDPNERFDSVLISWVKKSD*
Ga0070712_1016499381	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VGTIRGWFWGFVLVAIAACSYWLGPGVYSIKYAGSADKIYVDPKPADCDFWHAPVGKKGCHYQRIVIARDAKEVREIRPGESDPNERFDSILISWVKKSD*
Ga0066653_106377481	3300006791	Soil	VGTIRGWFWGIAIVACFCWFGPSVYSIKYAVSAEKIYLDPKPTDCDFWHVPVGTKGCHYQRAVIARRGAKEVRPIRPGESDHNQRFDSVLISWVKESD*
Ga0079220_100653532	3300006806	Agricultural Soil	VGTIKAWIRCSFFLTVVVCIYWVGPSVYSIKYAVSANKVYLDPKPKDCDFWRVPLGTKGCHYQRVVIGQYAKGVREMRPGEADPEQFESLLISWVKKTD*
Ga0079220_118470401	3300006806	Agricultural Soil	FVLVAIAACSYWLGPGVYSIKYAGSADKIYVDPKPADCDFWHAPVGKKGCHYQRIVIARDAKEVRKIRPGESDPNERFDSILISWVKKSD*
Ga0079219_104452841	3300006954	Agricultural Soil	VGTIKGWIRCSIFLAILACIYSFGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKRCHYQRVVIAQHAKMIREIRPGEGDPNEQFDSVLISW
Ga0126384_101019624	3300010046	Tropical Forest Soil	VGTIRGWIRGAVFVAMAVCFYWFGPSVYSIKYAVSADKIYVDSKPIDCDFWHAPLGKKGCHYQRVVIARSAKGIREIRPGETDPDVRYDSVRISWVKKSD*
Ga0126384_105051001	3300010046	Tropical Forest Soil	VGTIRGWFWGFVFVAMAVCFYWLGPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEFRAIRPGESDPNQRFDSVLISWVKKSD*
Ga0126373_100540975	3300010048	Tropical Forest Soil	VGTIKGWILCSIFVVIFACIFWVGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHAKGVREIHPGAGDPNEQFDSVLISWIKKSD*
Ga0126373_100761913	3300010048	Tropical Forest Soil	MVALAQTGNPLIRVWPRERLTSDRPLNPEFVGQGGDNVGTIRGWCWGFVFVAIAACFYWFGPSVYSIKYAVSAEKIYVDPKPKDCDFWHAPLGRKGCHYQRVVIARYAKEIREIRPGESDPNERFDSVLISWVKKPN*
Ga0126373_107487772	3300010048	Tropical Forest Soil	LRTIRGWFWSFVFVATAVCFYWLGPSVYSIKYAVSADKIYLDPKPTDCDFWHAPVGKKRCHYQRVVIARDAKEVRAIRPRESDPN
Ga0126373_109923711	3300010048	Tropical Forest Soil	VGIIRGWFWGFVFVTMAGCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEVRAIRPRESDPNQRFDSVLISWVKKSD*
Ga0126370_106738582	3300010358	Tropical Forest Soil	VGTIKGWILCSIFVVIFACIFWVGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHAKGVRETHPGAGDPNEQFDSVLISWIKKSD*
Ga0126370_116479681	3300010358	Tropical Forest Soil	RRLTSDRALTPEFVRPEGGNVGTIRGWFWGFVFVAMAVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHTPVGKKGCHYQRVVIARDAKEVRAIRPGESDPNQRFDSVLISWVKKSD
Ga0126376_112983972	3300010359	Tropical Forest Soil	VGTIKGWILCSIFVVIFAYIFWVGPSVNSIKYAVSDDKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHAKGVREIHPGAGDPNEQFDSVLISWIKKSD*
Ga0126376_114482261	3300010359	Tropical Forest Soil	VGTIRGWIRGAVFVVMAVCFYWFGPSVYSIKYAVSADKIYVDSKPIDCDFWHAPLGKKGCHYQRVVIARSAKGIREIRPGETDPDVRYDSVRISWVKKSD*
Ga0126376_122244131	3300010359	Tropical Forest Soil	SFDPRIRRAEGGNVGTIKGWFWGFVFVAVAVCFYWLGPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRAVIARDAKEVRAIRPGESDPNQRFDSVLISWVKKSD*
Ga0126372_109167791	3300010360	Tropical Forest Soil	VGIIRGWFWGFVFVAMAVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHAPLGKKGCHYQRVVIARDAKEVRAIRPGESDPNQRFDSVLISWVKKSD*
Ga0126378_109245032	3300010361	Tropical Forest Soil	LNPEFVEQRGDNVGTIRGWFWGFVFVAMAACFYWLGPSVYSIKYAVSAEKIYVDPKPTDCDFWHAPLVRKGCHYQRVVIARYAREIREIRPGESDPNERFDSVLISWVKKSN*
Ga0126378_127576251	3300010361	Tropical Forest Soil	IRGWFWGFVFVAMAVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHTPVGKKGCHYQRVVIARDAKEVRAIRPGESDPNQRFDSVLISWVKKSD*
Ga0126377_115258561	3300010362	Tropical Forest Soil	MAVVALAQTGNPLIRVWPRERLTSDRALNPEFVGQRGDDNVGTVRGWFWGFVFVAMAVCFYWLDPSVYSIKYTVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIAGDAKEVRA
Ga0126379_119568762	3300010366	Tropical Forest Soil	VASRRLTSDRALTPEFVRAEGGNVGTIRGWFWGFVFVAMAVCFYWLGPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEVRAIRPGESDPNQRFDSVLISWVKKSD*
Ga0126379_134290182	3300010366	Tropical Forest Soil	QRGDNVGTIRGWFWGFVFVAMAACFYWLEPSVYSIKYAVSADKIYIDPKPTDCDFWHAPVSKKGCHYQRIVIGRDAKEVRAIRPGESDPNQRFDSLLISWVKKSD*
Ga0126379_136021392	3300010366	Tropical Forest Soil	GNVGTIRDWFWGFVFIVMAACFYWLGPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVIIARDTKEVRAIRPSESDPNQRFDSVLISWVKKSD*
Ga0126381_1002154922	3300010376	Tropical Forest Soil	VGTIKGWILCSIFVVIFACIFRVGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHAKGVREIHPGAGDPNEQFDSVLISWIKKSD*
Ga0126381_1030605632	3300010376	Tropical Forest Soil	VGTIRGWIRGSVFVAILACIYWVGPSVYSIRYAVSADKIYVDPKPSDCDFWHAPLGKKNCHYQRVVIGRYAKGFREIRPGECDPNERFDSVVISWAKKSD*
Ga0126381_1039961531	3300010376	Tropical Forest Soil	EGGNVGTIRGWFWGFVFVAMAVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHTPVGKKGCHYQRVVIARDAKEVRAIRPGESDPNQRFDSVLISWVKKSD*
Ga0126381_1042237411	3300010376	Tropical Forest Soil	VGTIKGWILCSIFVVIFAYIFWVGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHAKGVREIHPGAGDPNEQFDSVLISWIKKSD*
Ga0182036_115654421	3300016270	Soil	VPLVAHLTPEFVRAEGGNVGTIRGWFWGFVFVAMAVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEVRAIPPGESDPNQRFDSVLISWVKKSD
Ga0182036_117065101	3300016270	Soil	AACFYWLGPSVYSIKYAVSADKIYIDPKPTDCDFWHAPVGKKGCHYQRIVIARDAKEVRAIRPGESDPNQRFDSVLISWVKKSD
Ga0182041_102336272	3300016294	Soil	MFAKPPRAWPRGLTSDRALTPEFVRAEGGNVGTIRSWFWGFVFVAMAVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEVRAIPPGESDPNQRFDSVLISWVKKSD
Ga0182033_103301411	3300016319	Soil	MWPRAASLPTELLIHNPNRAEGDNVATIKSWIRCSIFLAIFACIYWIGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHAKGIREIRAGEGDPDGQLDSVLISWVKKSD
Ga0182033_111789082	3300016319	Soil	GPLIRVWPRERLTSDRALNPEFVGHRGDNVGTIRGWFWGFVFVAMAACFYWLGPSVYSIKYAVSAEKIYVDPKPTDCDFWHAPVGKKGCHYQRIVIGRDVKAIREIRLAAGDPNERFDSVTISWVKKSD
Ga0182032_105775992	3300016357	Soil	MFAKPPRAWPRGLTSDRALTPEFVRAEGGNVGTIRGWFWGFVFVAMAVCFYWLDPSVYSIKYTVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEVRAIPPGESDPNQRFDSVLISWVKKSD
Ga0182032_109264181	3300016357	Soil	RNVLRGDNVGTIRGWIWGSVFVALAAWFYWFGPSVYSIKYAVSADNIYVDQKPTDCDFWHALLGKKGCHYQRVVIARHAKEISEIHPRQSDPNKRFDSVLISWAKKSD
Ga0182034_102263081	3300016371	Soil	VFVAMAVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEVRAIPPGESDPNQRFDSVLISWVKKSD
Ga0182040_117148361	3300016387	Soil	VGTIRGWFWGFVFVAMAACFYWLGPSVYSIKYAVSAEKIYVDPKPTDCDFWHAPLGRKRCHYQRVVIARYAREIREIRPGESDPNERFDSVLISWVKKSN
Ga0182037_104107081	3300016404	Soil	MFAKPPRAWPHGLTSDRALTPEFVRAEGGNVGTIRGWFWGFVFVAMAVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEVRAIPPGESDPNQRFDSVLISWVKKSD
Ga0182037_107943662	3300016404	Soil	VGDPSWSGYLYRPNGVGMVALAQTGNPLIRVWPRERLTSDGALNPEFVGQRGDNVGTIRGWFWGFVFVAMAACFYWLGPSVYSIKYAVSAEKIYVDPKPTDCDFWHAPLGRKGCHYQRVVIARYAREIREIRPGESDPNERFDSVLISWVKKSN
Ga0182039_104050142	3300016422	Soil	VATIKSWIRCSIFLAIFACIYWIGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHAKGIREIRAG
Ga0182038_118438811	3300016445	Soil	VGTIRGWFWGFVFVAMAVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEVRAIRPGESDPNERFESVLLSWVKKSD
Ga0187818_100525862	3300017823	Freshwater Sediment	LGSIKGCIWGSVFVAIAACFYWVGPSVFSIKYAVSADKIYVDPKPTDCDFWHAPLGKKECHYQRIVIARYVKDIREIRPGESDPNERFDSVLISWVKKSD
Ga0187820_10489703	3300017924	Freshwater Sediment	LGSIKGCIWGSVFVAIAACFYWVGPSVFSIKYAVSADKIYVDPKPTDCDFWHAPLGKKGCHYQRVVIARYVKDIREIRPGESD
Ga0187806_10344172	3300017928	Freshwater Sediment	CIWGSGFVAIAACFYWVGPSMFSIKYAVSADKIYVDPKPTDCDFWHAPLGKKGCHYQRVVIAHYAKEIRELRPGESDPNEQFDSVLISWVKKSD
Ga0187801_102175012	3300017933	Freshwater Sediment	LGTIKGCIWGSGFVAIAACFYWVGPSMFSIKYAVSADKIYVDPKPTDCDFWHAPLGKKECHYQRIVIARYVKDIREIRPGESDPNERFDSVLISWVKKSD
Ga0187819_100277525	3300017943	Freshwater Sediment	LGTIKGCIWGSGFVAIAACFYWVGPSMFSIKYAVSADKIYVDPKPTDCDFWHAPLGKKGCHYQRVVIAHYAKEIRELRPGESDPNEQFDSVLISWVKKTD
Ga0187823_100160084	3300017993	Freshwater Sediment	LGSIKGCIWGSVFVAIAACFYWVGPSVFSIKYAVSADKIYVDPKPTDCDFWHAPLGKKECHYQRIVIARYVKDIREIRPGESDPNERFDSVLISWVKKTD
Ga0066669_123085921	3300018482	Grasslands Soil	VGTIRGWFWGIAIVACFCWFGPSVYSIKYAVSAEKIYLDPKPTDCDFWHVPVGTKGCHYQRAVIARGGAKEVRPIRPGESDHNQRFDFC
Ga0210399_101761073	3300020581	Soil	VGTIRGWFWGFVVVAIAACSYWLEPGVYSIKYAVSADKIYVDPKPADCDFWHAPVGKKGCHYQRIVIARDAKEVREIRPGESDPNERFDSILISWVKKSD
Ga0210394_101259014	3300021420	Soil	EGGNVGTIRGWIRVSFFVAITACFYWFGPSVYSIKYAVSADKIYLDPKPPDCDFWHAPVGNKGCHYQSVVIARDAKDVREIRPGEGDPNRRYDSVLISWVKKSD
Ga0210394_105473331	3300021420	Soil	GTIRGWFWGFVVVAIAACSYWLEPGVYSIKYAVSADKIYVDPKPADCDFWHAPVGKKGCHYQRIVIARDAKEVRKIRPGESDPNERFDSILISWVKKSD
Ga0126371_105172742	3300021560	Tropical Forest Soil	VGTIKGWILCSIFVVIFACIFRVGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHAKGVREIHPGAGDPNEQFDSVLISWIKKSD
Ga0126371_133158901	3300021560	Tropical Forest Soil	LYRPNGVGMVALAQTGNPLIRVWPRERLTSDRPLNPEFVGQGGDNVGTIRGWCWGFVFVAIAACFYWFGPSVYSIKYAVSAEKIYVDPKPTDCDFWHAPLGRKGCHYQRVVIARYAREIREIRPGESDPNERFDSVLISWVKKPN
Ga0209325_10099162	3300027050	Forest Soil	VGTIRGWFWGFVLVAIAACSYWLGPGVYSIKYAVSADKIYVDPKPADCDFWHAPVGKKGCHYQRIVIARDAKEVRKIRPGESDPNERFDSILISWVKKSD
Ga0208604_10126371	3300027090	Forest Soil	VGTIRRWICASAFVAITACFYWVGPSVYSIKYAVSADKIYLDPKPPDCDFWHAPVGNKGCHYQNVVIVRDAKDVREIRRGDGDPNRRFDSVLISWVKKSD
Ga0209067_103914121	3300027898	Watersheds	LGTIKGWIRCSVFVAMATCFYWVGPSVYSIKYAVSADKIYVDPKPTDCDFWHAPLGKKGCHYQRVVIARYAKGIREIRPGEGDPNERF
Ga0209583_103810321	3300027910	Watersheds	FWGFVLVAIAACSYWLGPGVYSIKYAVSADKIYVDPKPADCDFWHAPVGKKGCHYQRIVIARDAKEVRKIRPGESDPNERFDSILISWVKKSD
Ga0209698_112816141	3300027911	Watersheds	MATCFYWVGPSVYSIKYAVSADKIYVDPRPTDCDFWHAPLGKKGCHYQRMVVARYAKRIREIRPGENDPNERFDSVLISWVKKSD
Ga0170818_1112670792	3300031474	Forest Soil	LSTIKGWIRCSVLVATAACFYWLGPSVYSIKYAVSADKIYVDPKPTDCDFWHAPLGKKECHYQRVVIARYAKEIRDLRPGESDPNEQFDSVLISWVKKI
Ga0318516_102050823	3300031543	Soil	CFYWLGPSVYSIKYAVSAEKIYVDPKPTDCDFWHAPLGRKGCHYQRVVIARYAREIREIRPGESDPNERFDSVLISWVKKSN
Ga0318541_106106142	3300031545	Soil	VASGARLTSDRALNPEFVGQRGDNVGTIRGWFWGFVFVAMAACFYWLGPSVYSIKYAVSAEKIYVDPKPTDCDFWHAPLGRKGCHYQRVVIARYAREIREI
Ga0310915_102236872	3300031573	Soil	VASGARLTSDRALNPEFVGQRGDNVGTIRGWFWGFVFVAMAACFYWLGPSVYSIKYAVSAEKIYVDPKPTDCDFWHAPLGRKGCHYQRVVIARYAREIREIRPGESDPNERFDSVLISWVKKSN
Ga0310915_104348592	3300031573	Soil	VATIKSWIRCSIFLAIFACIYWIGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHAKGIREIRAGEGDPDGQLDSVLISWVKKSD
Ga0318542_104105331	3300031668	Soil	VGTIRGWFWGFVFVAMAACFYWLGPSVYSIKYAVSAEKIYVDPKPTDCDFWHAPLGRKGCHYQRVVIARYAREIREIRPGESDPNERFDSVLISWVKKSN
Ga0318560_108174192	3300031682	Soil	EFVGQRGDNVGTIRGWFWGFVFVAMAACFYWLGPSVYSIKYAVSAEKIYVDPKPTDCDFWHAPLGRKGCHYQRVVIARYAREIREIRPGESDPNERFDSVLISWVKKSN
Ga0307474_115022961	3300031718	Hardwood Forest Soil	ALTSEFGIGAEGGNVGTIRGWIRVSFFVAITACFYWFGPSVYSIKYAVSADKIYLDPKPPDCDFWHAPVGNKGCHYQSVVIARDAKDVREIRPGEGDPNRRYDSVLISWVKKSD
Ga0306917_102275392	3300031719	Soil	VATIKSWIRCSIFLAIFACIYWIGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHGKGIREIRPGEGDPNEQFDSVLISWVKKSD
Ga0306918_105616992	3300031744	Soil	VATIKSWIRCSIFLAIFACIYWIGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHAKGIREIRAGEGDPDEQLDSVLISWVKKSD
Ga0307477_107657331	3300031753	Hardwood Forest Soil	ALTPKFSIGQRGDNVGNIRRWIWAAIFLAITACFSWVGPGVYSIKYTVSADKIYLDPKPPDCDFWHAPVGNKGCHYQSVVIARDAKDVREIQRDDGDFNRRFDSVLISWVKKSD
Ga0307475_105722102	3300031754	Hardwood Forest Soil	VGTIRGWFWGFVVVAIAACSYWLEPGVYSIKYALSADKIYVDPKPADCDFWHAPVGKKGCHYQRIVIARDAKEVREIRPGESDPNERFDSILISWVKKSD
Ga0318557_106071241	3300031795	Soil	FWGFVFVAMAVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEVRAIPPGESDPNQRFDSVLISWVKKSD
Ga0307473_100575441	3300031820	Hardwood Forest Soil	VGTIRGWIRVSFFVAITACFYWFGPSVYSIKYAVSADKIYLDPKPPDCDFWHAPVGNKGCHYQSVVIARDAKDVREIRPGEGDPNRRYDSVLISWVKKSD
Ga0310917_101751161	3300031833	Soil	VATIKSWIRCSIFLAIFACIYWIGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHAKGIREIRPGEGDPNEQFDSVLISWVKKSD
Ga0306925_104066642	3300031890	Soil	VGTIKSWIRCSIFLAIVACIYWVGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHGKGIREIRPGEGDPNEQFDSVLISWVKKSD
Ga0306923_109296633	3300031910	Soil	IFLAIVACIYWVGPSVYSIKYAVSADKIYLDPKPKDCDFWRAPLGTKGCHYQRVVIAQHAKGIREIRPGEGDPNEQFDSVLISWVKKSD
Ga0306923_118984662	3300031910	Soil	MFAKPPRAWPRGLTSDRALTPEFVRAEGGNVGTIRGWFWGFVFVAMAVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEVRAIPPGES
Ga0306921_114000952	3300031912	Soil	VGTIKSWIRCSIFLAIVACIYWVGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHAKGIREIRPGEGDPNEQFDSVLISWVKKSD
Ga0310912_101969092	3300031941	Soil	VPIMFAKPPRAWPRGLTSDRALTPEFVRAEGGNVGTIRGWFWGFVFVAMAVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEVRAIPPGESDPNQRFDSVLISWVKKSD
Ga0310912_104173662	3300031941	Soil	VATIKSWIRCSIFLAIFACIYWIGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHAKGIREIRAGEGNPDGQLDSVLISWVKKSD
Ga0310916_108946021	3300031942	Soil	VWPRERLTSDRALNPEFVGQRGDNVGTIRGWFWGFVFVAMAACFYWLGPSVYSIKYAVSAEKIYVDPKPTDCDFWHAPLGRKGCHYQRVVIARYAREIREIRPGESDPNERFDSVLISWVKKSN
Ga0310916_111682582	3300031942	Soil	VGTIRGWFWGFVFVAMAVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEVRAIRPGESDPNQRFESV
Ga0310913_108372492	3300031945	Soil	MFAKPPRAWPRGLTSDRALTPEFVRAEGGNVGTIRGWFWGFVFVAMAVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEVRAIPPGESDP
Ga0310909_100545803	3300031947	Soil	MAACFYWLGPSVYSIKYAVSAEKIYVDPKPTDCDFWHAPLGRKGCHYQRVVIARYAREIREIRPGESDPNERFDSVLISWVKKSN
Ga0310909_102443824	3300031947	Soil	VATIKSWIRCSIFLAIVACIYWVGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHGKGIREIRPGEGDPNEQFDSVLISWVKKSD
Ga0310909_106869642	3300031947	Soil	MFAKPPRAWPRGLTSDRALTPEFVRAEGGNVGTIRGWFWGFVFVAMAVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEVRAIPPGESDPNQRFDSVLISWVKKSD
Ga0306926_116950831	3300031954	Soil	YRSNGVDMLALAQTGNPLIRVWPRERLTSDGALNPEFVGQGGNVGTIRGWFWGFVFVAMAACFYWLGPSVYSIKYAVSAEKIYVDPKPTDCDFWHAPLGRKGCHYQRVVIARYAMDIREIRPRESDPNERFDSVLISWVKKSD
Ga0307479_101130742	3300031962	Hardwood Forest Soil	MAALARPKSDCFDPKIFNRAAGDNVGTIRRWIWAAVFVAITACFSWVGPGVYLIKYAVSADKIYLDPKPPDCDFWHAPVGNKGCHYQSVVIARDAKDVREIRRGDGDPNRRFDSVLNLMGQKI
Ga0306922_110101992	3300032001	Soil	VGAIRGWFWGFVFVAMAACFYWLGPSVYSIKYAVSAEKIYVDPKPTDCDFWHAPVGKKGCHYQRIVIGRDVKAIREIRLAAGDPNERFDSVTISWVKKSD
Ga0318533_101973322	3300032059	Soil	GNVGTIRGWFWGFVFVAMGVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEVRAIPPGESDPNQRFDSVLISWVKKSD
Ga0318533_112550771	3300032059	Soil	VATIKSWIRCSIFLAIFACIYWIGPSVYSIKYAVSADKIYLDPKPKDCDFWRVPLGTKGCHYQRVVIAQHAKGIREIRPGEGDPN
Ga0306924_107938701	3300032076	Soil	TIRGWFWGFVFVAMAVCFYWLGPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEVRAIRPGESDPNQRFDSVLISWVKKSD
Ga0306924_116055032	3300032076	Soil	VGTIRGWFWGFVFVAMAACFYWLGPSVYSIKYAVSADKIYIDPKPTDCDFWHAPLGKKGCHYQRIVIARDAKKVRAIRPGESDPNQRFDSVLISWVKKSD
Ga0306924_116354881	3300032076	Soil	MFAKPPRAWPRGLTSDRALTPEFVRAEGGNVGTIRGWFWGFVFVAMAVCFYWLDPSVYSIKYAVSADKIYVDPKPTDCDFWHAPVGKKGCHYQRVVIARDAKEVRAIRPGESDPNERFESVLLSWVKKSD
Ga0307472_1001529073	3300032205	Hardwood Forest Soil	VGTIRRWICASVFLAITACFYWVGPSVYSIKYALSADKIYLDPKPPDCDFWHAPVGNKGCHYQSVVIARDAKDVREIRPGEGDPNRRYDSVLISWVKKSD
Ga0306920_1011641651	3300032261	Soil	VGTIRGWFWGFVFVAMAACFYWLGPSVYSIKYAVSAEKIYVDPKPTDCDFWHAPLGRKGCHYQRVVIARYAMDIREIRPRESDPNERFDSVLISWVKKSD
Ga0306920_1017760121	3300032261	Soil	VGTIRGWFWGFVFVAMAACFYWLGPSVYSIKYAVSADKIYIDPKPTDCDFWHAPVGKKGCHYQRIVIARDAREVRAIRPGESDPSQRFDSVLISWVKKSD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083018

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences