Metagenome / Metatranscriptome Family F069421

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069421
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	91 residues
Representative Sequence	LPRLEDLDDVDIRIFAPAAGSALGQRTASHPFGVAAGRDALGPELARRVRGEMDHETVRINMARAAALVHLAAGIGGLELDAHDCSVMK
Number of Associated Samples	98
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	38.71 %
% of genes near scaffold ends (potentially truncated)	54.03 %
% of genes from short scaffolds (< 2000 bps)	92.74 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.516 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.032 % of family members)
Environment Ontology (ENVO)	Unclassified (39.516 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.581 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.91% β-sheet: 0.00% Coil/Unstructured: 70.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF12625	Arabinose_bd	30.65
PF12833	HTH_18	12.10
PF06183	DinI	0.81
PF13505	OMP_b-brl	0.81
PF04392	ABC_sub_bind	0.81
PF00230	MIP	0.81
PF13358	DDE_3	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.81
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.52 %
Unclassified	root	N/A	35.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.52 %
Unclassified	root	N/A	35.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.52 %
Unclassified	root	N/A	35.48 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	63.71 %
Unclassified	root	N/A	35.48 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	62.10 %
Unclassified	root	N/A	35.48 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	59.68 %
Unclassified	root	N/A	35.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	59.68 %
Unclassified	root	N/A	35.48 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	59.68 %
Unclassified	root	N/A	35.48 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_123881899	Not Available	1279	Open in IMG/M
3300001545\|JGI12630J15595_10009883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2058	Open in IMG/M
3300001991\|JGI24743J22301_10160581	Not Available	507	Open in IMG/M
3300002239\|JGI24034J26672_10004567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1967	Open in IMG/M
3300002245\|JGIcombinedJ26739_100061088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3455	Open in IMG/M
3300003505\|JGIcombinedJ51221_10112168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1090	Open in IMG/M
3300005093\|Ga0062594_101819502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	642	Open in IMG/M
3300005165\|Ga0066869_10032952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	845	Open in IMG/M
3300005186\|Ga0066676_11116209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300005332\|Ga0066388_105909172	Not Available	618	Open in IMG/M
3300005363\|Ga0008090_15323878	Not Available	552	Open in IMG/M
3300005363\|Ga0008090_15669524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	894	Open in IMG/M
3300005440\|Ga0070705_101778219	Not Available	522	Open in IMG/M
3300005441\|Ga0070700_100002893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8823	Open in IMG/M
3300005444\|Ga0070694_100744531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300005457\|Ga0070662_101321900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	620	Open in IMG/M
3300005459\|Ga0068867_102209162	Not Available	522	Open in IMG/M
3300005467\|Ga0070706_100627127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	998	Open in IMG/M
3300005561\|Ga0066699_10468107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	901	Open in IMG/M
3300005564\|Ga0070664_101622626	Not Available	613	Open in IMG/M
3300005617\|Ga0068859_100450354	Not Available	1383	Open in IMG/M
3300005713\|Ga0066905_100258146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1344	Open in IMG/M
3300005713\|Ga0066905_101340701	Not Available	645	Open in IMG/M
3300005713\|Ga0066905_102188597	Not Available	515	Open in IMG/M
3300005719\|Ga0068861_100029258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4029	Open in IMG/M
3300005764\|Ga0066903_102797693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	946	Open in IMG/M
3300005764\|Ga0066903_102974986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	918	Open in IMG/M
3300005764\|Ga0066903_103582418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300005764\|Ga0066903_105121482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	694	Open in IMG/M
3300005764\|Ga0066903_105232136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	686	Open in IMG/M
3300005764\|Ga0066903_107459951	Not Available	564	Open in IMG/M
3300005764\|Ga0066903_109089737	Not Available	502	Open in IMG/M
3300005843\|Ga0068860_100712877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1013	Open in IMG/M
3300006051\|Ga0075364_10093762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1994	Open in IMG/M
3300006057\|Ga0075026_100783064	Not Available	577	Open in IMG/M
3300006163\|Ga0070715_10014976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2884	Open in IMG/M
3300006172\|Ga0075018_10244457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	867	Open in IMG/M
3300006178\|Ga0075367_11091605	Not Available	510	Open in IMG/M
3300006847\|Ga0075431_100395668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1383	Open in IMG/M
3300006852\|Ga0075433_11969501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300006854\|Ga0075425_101964585	Not Available	655	Open in IMG/M
3300006904\|Ga0075424_101399912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300016294\|Ga0182041_11712293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300016319\|Ga0182033_11681783	Not Available	575	Open in IMG/M
3300016371\|Ga0182034_10126256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1883	Open in IMG/M
3300016387\|Ga0182040_10241947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1351	Open in IMG/M
3300016387\|Ga0182040_10879898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	742	Open in IMG/M
3300017955\|Ga0187817_10655875	Not Available	669	Open in IMG/M
3300018481\|Ga0190271_10409475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1452	Open in IMG/M
3300019876\|Ga0193703_1017586	All Organisms → cellular organisms → Bacteria → Proteobacteria	1091	Open in IMG/M
3300019887\|Ga0193729_1226738	Not Available	614	Open in IMG/M
3300020579\|Ga0210407_10783991	Not Available	736	Open in IMG/M
3300021407\|Ga0210383_10985246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	716	Open in IMG/M
3300021478\|Ga0210402_10022002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5469	Open in IMG/M
3300021478\|Ga0210402_10253108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1626	Open in IMG/M
3300021478\|Ga0210402_10484377	Not Available	1149	Open in IMG/M
3300021478\|Ga0210402_11165525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	698	Open in IMG/M
3300022756\|Ga0222622_10554369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300025915\|Ga0207693_10822500	Not Available	715	Open in IMG/M
3300025916\|Ga0207663_10553533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	899	Open in IMG/M
3300025928\|Ga0207700_11040770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	732	Open in IMG/M
3300025929\|Ga0207664_11029465	Not Available	737	Open in IMG/M
3300025945\|Ga0207679_10963733	Not Available	781	Open in IMG/M
3300026498\|Ga0257156_1119023	Not Available	550	Open in IMG/M
3300027663\|Ga0208990_1095144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	833	Open in IMG/M
3300027909\|Ga0209382_10071454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4101	Open in IMG/M
3300027909\|Ga0209382_10415916	All Organisms → cellular organisms → Bacteria → Proteobacteria	1495	Open in IMG/M
3300028379\|Ga0268266_12255880	Not Available	516	Open in IMG/M
3300028381\|Ga0268264_11621468	Not Available	658	Open in IMG/M
3300028592\|Ga0247822_10587691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	890	Open in IMG/M
3300028712\|Ga0307285_10049031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1050	Open in IMG/M
3300028716\|Ga0307311_10151236	Not Available	668	Open in IMG/M
3300028720\|Ga0307317_10107055	Not Available	928	Open in IMG/M
3300028768\|Ga0307280_10227376	Not Available	665	Open in IMG/M
3300028771\|Ga0307320_10281436	Not Available	659	Open in IMG/M
3300028807\|Ga0307305_10301970	Not Available	728	Open in IMG/M
3300028807\|Ga0307305_10515042	Not Available	536	Open in IMG/M
3300028876\|Ga0307286_10050374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1411	Open in IMG/M
3300028885\|Ga0307304_10528206	Not Available	542	Open in IMG/M
3300031231\|Ga0170824_107864565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	715	Open in IMG/M
3300031543\|Ga0318516_10544089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	665	Open in IMG/M
3300031545\|Ga0318541_10091236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1624	Open in IMG/M
3300031545\|Ga0318541_10206627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1087	Open in IMG/M
3300031561\|Ga0318528_10112049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1438	Open in IMG/M
3300031573\|Ga0310915_10054516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2592	Open in IMG/M
3300031680\|Ga0318574_10171836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1238	Open in IMG/M
3300031719\|Ga0306917_10209255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1480	Open in IMG/M
3300031719\|Ga0306917_10246028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1369	Open in IMG/M
3300031719\|Ga0306917_11032829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300031724\|Ga0318500_10163293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1053	Open in IMG/M
3300031748\|Ga0318492_10786841	Not Available	512	Open in IMG/M
3300031763\|Ga0318537_10086709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1156	Open in IMG/M
3300031763\|Ga0318537_10325285	Not Available	568	Open in IMG/M
3300031769\|Ga0318526_10039490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1763	Open in IMG/M
3300031781\|Ga0318547_10567452	Not Available	703	Open in IMG/M
3300031793\|Ga0318548_10352338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	723	Open in IMG/M
3300031832\|Ga0318499_10187560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	807	Open in IMG/M
3300031860\|Ga0318495_10228827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	834	Open in IMG/M
3300031879\|Ga0306919_10692475	Not Available	785	Open in IMG/M
3300031879\|Ga0306919_11028820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	629	Open in IMG/M
3300031879\|Ga0306919_11049182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300031880\|Ga0318544_10243668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300031890\|Ga0306925_10380025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1515	Open in IMG/M
3300031890\|Ga0306925_10879548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	923	Open in IMG/M
3300031893\|Ga0318536_10241460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	918	Open in IMG/M
3300031897\|Ga0318520_10589697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	690	Open in IMG/M
3300031910\|Ga0306923_10337848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1718	Open in IMG/M
3300031910\|Ga0306923_11228248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	799	Open in IMG/M
3300031912\|Ga0306921_11377669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	776	Open in IMG/M
3300031945\|Ga0310913_10094089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2017	Open in IMG/M
3300031945\|Ga0310913_11210561	Not Available	525	Open in IMG/M
3300031946\|Ga0310910_10465457	Not Available	1003	Open in IMG/M
3300031947\|Ga0310909_10207321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1630	Open in IMG/M
3300032001\|Ga0306922_10517126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1271	Open in IMG/M
3300032043\|Ga0318556_10313613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	820	Open in IMG/M
3300032051\|Ga0318532_10112878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	960	Open in IMG/M
3300032063\|Ga0318504_10656804	Not Available	504	Open in IMG/M
3300032076\|Ga0306924_12573973	Not Available	508	Open in IMG/M
3300032090\|Ga0318518_10190588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1048	Open in IMG/M
3300032090\|Ga0318518_10540930	Not Available	596	Open in IMG/M
3300032261\|Ga0306920_102701266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300032261\|Ga0306920_103214177	Not Available	611	Open in IMG/M
3300033289\|Ga0310914_10719837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	894	Open in IMG/M
3300033290\|Ga0318519_10695621	Not Available	621	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.68%
Host-Associated	Host-Associated	15.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.45%
Plants	Host-Associated → Plants	15.32%
Aquatic	Environmental → Aquatic	3.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.06%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.65%
Sediment	Environmental → Aquatic → Sediment	2.42%
Roots	Host-Associated → Plants → Roots	1.61%
Freshwater	Environmental → Aquatic → Freshwater	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.10%
Loam	Environmental → Terrestrial → Soil → Loam	19.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.42%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.42%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.61%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.61%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.61%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.61%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1238818994	3300000956	Soil	LNCVEDLDGLDMRLLAPANGLALGQRTAFCPFRVAASRDALGPELARRVRGEVDQQTVRINMALAAALVHLAGGIGGLEL
JGI12630J15595_100098833	3300001545	Forest Soil	SGMASHLPRLKDLDGLDTRFLAPAAGFALGQRTASHPFGVPAGRDALGPELARRVRGEVDHDAVRVDVAHAAALVHLAGGICSLELDPHDCSVMK*
JGI24743J22301_101605812	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	SHLPRLKDLDGFDTRFLAPAIGIPFGQRWACCPFGVAAGRDALGPEGARRVRGEMDHETVRINMXRAAALVCLATGIGGLELDAHDYSVMK*
JGI24034J26672_100045675	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	REEVWARQTASHLPRLKDLDGFDTRFLAPAIGIPFGQRWACCPFGVAAGRDALGPEGARRVRGEMDHETVRINMVRAAALVCLATGIGGLELDAHDYSVMK*
JGIcombinedJ26739_1000610885	3300002245	Forest Soil	MASHLPRLKDLDGLDTRFLAPAAGFALGQRTASHPFGVPAGRDALGPELARRVRGEVDHDAVRVDVAHAAALVHLAGGICSLELDPHDCSVMK*
JGIcombinedJ51221_101121681	3300003505	Forest Soil	MASHLPRLKDLDGFDTRFLAPATGFALGQRTAFHPFGVPAGRDALGPELARRVRGEVDHDAVRVDVAHAAALVHLAGGICGLELDPHDCSVMK*
Ga0062594_1018195021	3300005093	Soil	MGSHSLRLNDLDGLDQRILAPAAGFALGQRTASHPLGVAAGRDALGPEVVRRVRGEMDHETVRINVACATALVHLAGGICGLELDPHDCSVMK*
Ga0066869_100329523	3300005165	Soil	MASHLPRLKDLDGLDTRFLAPAAGFALGQRTASHPFGVAAGRDALGPELARRVRGEVDHDAVRVDVAHAAALVHLAGGICSLELDPHDCSVMK*
Ga0066676_111162091	3300005186	Soil	DTRFLAPAIGIAFGQRTACCPFGVAAGRDALGPEVARRVRGEMDYETMRINMACATALVHLAADIGGLELEAHDYSVMK*
Ga0066388_1059091722	3300005332	Tropical Forest Soil	LLFRLKDLDSLDMGLLAPANGLALGQRTAFCPFRVAASRDALGPKFGRRVRGEMDQQTVRINMARAAALVHLAGGIGGLEL
Ga0008090_153238781	3300005363	Tropical Rainforest Soil	ASHLPRLEDLDGLDIRLLAPAAGLSFGRRAASLPFRVAERRDACGPELARRVRGEMDHDAVRVGTPCAAALVHLASGIDGLKLDAHDCSVMK*
Ga0008090_156695241	3300005363	Tropical Rainforest Soil	VPLARERQSHLPCIKDLDSLDIRFLAPTGGFAFGQHTGFCPFRVAASRDAVRPELGRRVRGEMDQETVRINMAHAAALVDLAAGIGGLEFDAHDYSVMK*
Ga0070705_1017782192	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	SARASCSGTASHLNCVEDLDGVDIRLFAPAIGIAFCQRTACCPFGVAAGRDALGPEVARRVRGEMDHETVRINMARAAALVHLAGGIGGLELDPHDCSEVAGSVDT*
Ga0070700_1000028931	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	QTASHLPRLKDLDGFDTRFLAPAIGIPFGQRWACCPFGVAAGRDALGPEGARRVRGEMDHETVRINMVRAAALVCLATGIGGLELDAHDYSVMK*
Ga0070694_1007445311	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	SGMASHLPRLKDLDGLDTRFLAPAIGIAFGQRTACCPFGVAAGRDALGPEVARRVRGEMDYETVRINMACATALVHLAADIGGLELEAHDYSVMK*
Ga0070662_1013219002	3300005457	Corn Rhizosphere	FDTRFLAPAIGIPFGQRWACCPFGVAAGRDALGPEVARRMGSEMDHETVRINMARATALVHLATGIGGLELDAHDYSVMK*
Ga0068867_1022091621	3300005459	Miscanthus Rhizosphere	YGLPARDSKEKASHLPRLKDLDDLDTRFRAPAAGFALGQLTALPPFSVAEGRDARGPELARRVRGEVDYDAVRIDVARAAALVHLAGGIGGLELDPHDCSEVAGSVDT*
Ga0070706_1006271271	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LPRLEDLDGLDIRFLAPAAGLSFGRRRAFLPFGVAERRNACGPEPARRLRGEVDHDAVRVNADCAAALVDLAAGIDGLKLDAHDYSVMK*
Ga0066699_104681071	3300005561	Soil	SGTASHLPRLEDLDGLDIRFLAPAAGLSFGRRRAFLPFGVAERRSACGPEPARWLRGEVDHDAVRVDADCAAALVDLAAGIDGLKLDAHDYSVMKLPAAVTDNVSGR*
Ga0070664_1016226261	3300005564	Corn Rhizosphere	TASHLPRLKDLDGFDTRFLAPAIGIPFGQRWACCPFGVAAGRDALGPEGARRVRGEMDHETVRINMVRAAALVCLATGIGGLELDAHDYSVMK*
Ga0068859_1004503541	3300005617	Switchgrass Rhizosphere	LPRLKDLDGFDTRFLAPAIGIPFGQRWACCPFGVAAGRDALGPEGARRVRGEMDHETVRINMVRAAALVCLATGIGGLELDAHD
Ga0066905_1002581462	3300005713	Tropical Forest Soil	VPLARERHSHLSCIKDLDSLDTRFLAPAGGLAFGQHTGFCPFRVAASRDAVGPELGRRVRGEMDQETVRINMAPAAAPVHLAAGICGLEFDAHDYSVMK*
Ga0066905_1013407011	3300005713	Tropical Forest Soil	LLCVEDLDGLDTRFLAPATGFAFGQRTASHPFGVAVGRDALGPELAWRMCGEVDQDAVRVDVPRAAAFVDLAGGIDGLELDAHACSVMKGPGRADP*
Ga0066905_1021885971	3300005713	Tropical Forest Soil	LPRLKDLDGLDIRVLAPAAGFVFGQRTASHPFGVAVGRDALGPEFAWRMCGEVDHDAVRVDVARGAAFVHLPGGIDGLELDAHAFSVMKGPGRADP*
Ga0068861_1000292581	3300005719	Switchgrass Rhizosphere	ETTSNRREEVWARQTASHLPRLKDLDGFDTRFLAPAIGIPFGQRWACCPFGVAAGRDALGPEGARRVRGEMDHETVRINMVRAAALVCLATGIGGLELDAHDYSVMK*
Ga0066903_1027976932	3300005764	Tropical Forest Soil	MGLLAPADGLAFGQRTAFCPFRVAASRDALGPELGRRVPGEMDQETVRVNMACAAALMHLAAGIGGLEFDAHDDSVMK*
Ga0066903_1029749862	3300005764	Tropical Forest Soil	LLFRLEDLDSLDMGLLAPANGLGLGQRTGFCPFRVAASRDALGPKLGRRVRGEMDQQTVRINMARAATLVHLAAGIGGLEFDAHDYSVMK*
Ga0066903_1035824181	3300005764	Tropical Forest Soil	LNCVEDLDGVDIRLFAPATGIAFGQRTACRPFGVAAGRDALGPEVARRVRGEMDHEAVRINMACAAALVHLAAGIGSLELDAHEYSVMK*
Ga0066903_1051214822	3300005764	Tropical Forest Soil	SHLPCLDDLDGLDIRFLAPAVGLAFGQHTGFCPFRVAASHDAVGPELGRRVRGEMDQETVRINMARAAALVHLAAGIGGLEFDAHDYSVMK*
Ga0066903_1052321362	3300005764	Tropical Forest Soil	LAVELILVVRPSGTPLGTVSHLNCVEDLDGVNIRLFAPAIGIAFGQCVAFCPFGVVAGRDALGPEVARRVRGEMDHETVRINMACAAALVHLATGIGGLELDAHDYSVMK*
Ga0066903_1074599512	3300005764	Tropical Forest Soil	LHRLKDLDGLDIRVLAPAVGFALGQRTASHPFGMAAGRDALWPELAWRMCGEVDHDAVRVDVPRAAAFVDLAGGIDSLELDPHDYSVRK*
Ga0066903_1090897371	3300005764	Tropical Forest Soil	LHRLKDLDGLDIRVLAPAVGFALGQRTAFHPFGVAVGRDALGPELAWRMCGEVDHDAVRVDVARAAAFVHLAGGIGGLERDAHACSV
Ga0068860_1007128772	3300005843	Switchgrass Rhizosphere	LPRLKDLDGFDTRFLAPAIGIPFGQRWACCPFGVAAGRDALGPEGARRVRGEMDHETVRINMVRAAALVCLATGIGGLELDAHDYSVMK*
Ga0075364_100937624	3300006051	Populus Endosphere	VGTPRLKDLDGLDTRFLAPTAGFAFGQRTAFHPFGMAAGRDALGPELARRICGEVDHDAVRVDVGRAAAFVHLAGSFAPAGGQG*
Ga0075026_1007830641	3300006057	Watersheds	LNCVEDLDGVDIRLFAPAIGIAFRQRTACCPFGVAAGRDALGPEVARRVRGEMDHETVRINMARAAALVHLAAGIGGLELDAH*
Ga0070715_100149761	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	RLKDLDGFDTRFLAPAIGIPFGQRWACCPFGVAAGRDALGPEGARRVRGEMDHETVRINMVRAAALVCLATGIGGLELDAHDYSVMK*
Ga0075018_102444572	3300006172	Watersheds	LPRLKDLDGLDTFLAPAIGIAFGQRTACCPFGVAAGRDALGPEVARRVRGEMDYETVRINMACATALVHLAADIGGLELEAHDYSVMK*
Ga0075367_110916052	3300006178	Populus Endosphere	GSASHFNYVEDLDGLDTRLLAPAVGFALGQRTVSHPFGVAAGRDAVGPELARRMRGETDHEAVRINTARAAALVHLAGRIGGLELNAHGYPS*
Ga0075431_1003956683	3300006847	Populus Rhizosphere	LPRLKDLDGLDTRFLTPAAGFALGQRTAFHPFGVAAGRDALGPELAWRMCGEVDHDAVRVDAARTAAFVHLAGGIGGLELDSHGYSVMKESAALAVG*
Ga0075433_119695012	3300006852	Populus Rhizosphere	LPRLKDLDGLDTRFLAPAIGIAFGQRTACCPFGVAAGRDALGPEVARRVRGEMDYETVRINMACATALVHLAADIGGLELEAHDYSVMK*
Ga0075425_1019645851	3300006854	Populus Rhizosphere	LPRLKDLDGLDTRFLAPAIGIAFGQRTACCPFGVAAGRDALGPEVARRVRGEMDYETVRINMACATALVHLAADIDGLELEAHDYSVMK*
Ga0075424_1013999122	3300006904	Populus Rhizosphere	SWPSRVASHLPCLDDLDGLDIRFLAPAVGLAFGQHTGFCPFRVAASPDALGPELGRRVRGEMDQETVRINMARAAALVHLAAGIGGLEFDAHDYSVMK*
Ga0182041_117122932	3300016294	Soil	SGTTSRLPRLEDLDGLDIRFLAPAAGIAFGQLTASRPLGVAAGHDTLGPELARRIRGEVDHDAVRVDTPCAAALVHLAGGIDGLKLDAHDYSVMKLPAALTDNGSGR
Ga0182033_116817831	3300016319	Soil	LNCVEDLDGLDIRIFAPAAGIAFGQRMACRPFGVAAGRDALGPELARWVRGEMDHETVRINMARAAALVHLAAGIGGLELDAHDYSVMK
Ga0182034_101262563	3300016371	Soil	FAPAAGIAFGQRTASHPFGVAAGRDALGPELARRMRGEMDQETVRINTACAAALVHLAGCIGGLKLDAHDYSVMK
Ga0182040_102419471	3300016387	Soil	APAAGIAFGQRTASHPFGVAAGRDALGPELARRMRGEMDQETVRINTACAAALVHLAGCIGGLKLDAHDYSVMK
Ga0182040_108798982	3300016387	Soil	PSGTASHLPRLEDLDGLDIRFFAPTAGIAFSKRTACGPLGVAAGRDALGPELARWVRGEMDHETVRINMARTAALVHVAGRVGGLELDAHDYSVMK
Ga0187817_106558751	3300017955	Freshwater Sediment	LPRLKDLDGLDTRVLAPAAGFALSERIASHPFGVAAGRDALGPELARRVRGEADHDAVRVDVAHAVALVHIAGGIGGLELDSHDCSVMK
Ga0190271_104094751	3300018481	Soil	MPSHLLHVEDLDGLHIRFLAPVAGFAVGHRATFHPFGVAAGRNALPPKVAWRVHNEVDHDAVRVDVGLAAALVHLASGICGLELDPHIPRS
Ga0193703_10175862	3300019876	Soil	FTSSRFSGMASHLPRLKDLDGLDTRFLAPAAGFALGQRTASHPFGVAAGRDALGPEVARRVRGEMDHETVRINVACATALVQLAGGICGLELDPHDCSVMK
Ga0193729_12267381	3300019887	Soil	LAVSGMASHLPRLKDLDGLDTRFLAPAAGFALGQRTASHPFGVAAGRDALGPEVARRVRGEMDHETVRINVACATALVQLAGGICGLELDPHDCSVMK
Ga0210407_107839911	3300020579	Soil	LPRLKDLDGLDTRFLAPAIGIAFGQRTACCPFGVAAGRDALGPEVARRVRGEMDYETVRINMACATALVHLAADIGGLELEAHDYSVMK
Ga0210383_109852461	3300021407	Soil	LPRLKDLDGLDTRFLAPAAGFALGRRPAYHPFSMAAGRDALGPELARRVRGEVDHDAVRVDVAHAAALVHLAGGICGLELDPHDCSVMK
Ga0210402_100220023	3300021478	Soil	MASHLPRLKDLDGLDTRFLAPAAGFALGQRTASHPFGVAAGRDALGPELARRVRGEVDYDAVRVDVVHAAALVHLAGGICGLELDPHDCSVMK
Ga0210402_102531082	3300021478	Soil	MASHLPRLKDLDDLDTRFLAPAAGFALGQRTAPHPFSVAGGRDALGPELARRVRGEVDQDAVRVDVAHAAALVHLAGGIGGLELDPHGCSVMK
Ga0210402_104843771	3300021478	Soil	LPRLKDLDGLDTRFLAPAAGFALGQRTAPHPFSVAAGRAALGPELARRVRGEVDQDAARVDVAYAAALVHLAGGIGGLELDPHDCSVMK
Ga0210402_111655251	3300021478	Soil	LPRLKNLDDLDTRFLAPAAGFALGQRTASHPFGVAAGRDALRPKLARRVRGEVDQNAVRVDAAHAAALMDLAGGIGGLELDPHNYSVMK
Ga0222622_105543692	3300022756	Groundwater Sediment	FSLGTASHLNCVEDLDGVDIRLFAPAIGIAFGQRTACHPFSMAAGRDALGPEGARRMRGEMDHETMRINTARAAALVYLAAGIGGLELDAHDYSVMK
Ga0207693_108225002	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LPRLEDLDGLDIWFLGPAVGLAFGQHTGFCPFRVAASRDAVGPELGRRVRGEMDQDTVRINMARAAALAHLAAGIGGFEFDAHDYSVMK
Ga0207663_105535331	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	SHLPRLEDLDGLDIRFLAPAAGLSFGRRAASFPFGVAERRNACGPELARRLRGEADHDAVRVNADCAAALVDLAAGIDGLKLDAHDYSVMKLPTALTDNGSGR
Ga0207700_110407702	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	QGGARFSQTASRLPRLKDLDGFDTRFLAPAMGLAFGQCWVCCPFGVAAGRDALGPEVARRMGSEMDHETVRINMARAAALVCLATGIGGLELDAHDYSVMK
Ga0207664_110294651	3300025929	Agricultural Soil	LNRLASSWLLTFRNGITLPRLKHLDGLYTRVLAPAAGFALGQRTASHPFGVAAGRDALGPELARRVRGEVDYDAVRVDVAHAAALVHLAGGIGGLELDPHDYSVMK
Ga0207679_109637331	3300025945	Corn Rhizosphere	LPRLKDLDGFDTRFLAPAIGIPFGQRWACCPFGVAAGRDALGPEGARRVRGEMDHETVRINMVRAAALVCLATGIGGLELDAHDYSVMK
Ga0257156_11190231	3300026498	Soil	LPRLKDLDGLDTRFLAPAMGIAFGQRTACCPFGVAAGRDALGPEVARRVRGEMDYETVRINMACATALVHLAADIGGLELEAHDYSVMK
Ga0208990_10951441	3300027663	Forest Soil	MGSHLPRLKDLDGLDTRFLAPAAGFALGQRTASHPFGVAAGRDALGPALAWRVRGEMDHETVRINVACATALVQLAGGICGLELDPHDCSVMK
Ga0209382_100714544	3300027909	Populus Rhizosphere	VGTPRLKDLDGLDTRFLAPTAGFAFGQRTAFHPFGMAAGRDALGPELARRICGEVDHDAVRVDVGRAAAFVHLAGSFAPAGGQG
Ga0209382_104159162	3300027909	Populus Rhizosphere	LPRLKDLDGLDTRFLTPAAGFALGQRTAFHPFGVAAGRDALGPELAWRMCGEVDHDAVRVDAARTAAFVHLAGGIGGLELDSHGYSVMKESAALAVG
Ga0268266_122558801	3300028379	Switchgrass Rhizosphere	LPHLKDLDGLDTRLLAPAAGFALGQRTGSHPFGVAAGRDALGPEFARRMRREMDNEAVRINTAGAAALVHLAGRIGGL
Ga0268264_116214681	3300028381	Switchgrass Rhizosphere	LPRLKDFDGRDTRFLAPAAGFALGQRTASHPFSVAAGREALGPELARQVRGEVDYDAVRIDVHPAAALVHLAGGIGGLELDPHDCSFMK
Ga0247822_105876911	3300028592	Soil	SLYLQSSVQKGARFSQTASHLPPLKDLDGFDTRFLAPAMGLAFGQCWVCCPFGVAAGRDALGPEVARRMGSEMDHETVRINMARATALVHLATGIGGLELDAHDYSVMK
Ga0307285_100490311	3300028712	Soil	HAFSLGTASHLNCVEDLDGVDIRLFAPAIGIAFGQRTACHPFSMAAGRDALGPEGARRMRGEMDHETMRINTARAAALVYLAAGIGGLELDAHYYSVMK
Ga0307311_101512362	3300028716	Soil	SSRFSGMASHLPRLKDLDGLDTRFLAPAAGFALGQRTASHPFGVAAGRDALGPEVARRVRGEMDHETVRINVACATALVQLAGGICGLELDPHDCSVMK
Ga0307317_101070552	3300028720	Soil	LRYQLAFSGMASHLPRLKDLDGLDTRFLAPAAGFALGQRTASHPFGVAAGRDALGPELARRVRGEVDHDAVRVDVAHAAALVHLADGICGLELDPHDCSVMK
Ga0307280_102273762	3300028768	Soil	WGTWRYQLAFSGMASHLPRLKDLDGLDTRFLAPAAGFALGQRTASHPFGVAAGRDALGPELARRVRGEVDHDAVRVDVAHAAALVHLADGICGLELDPHDCSVMK
Ga0307320_102814361	3300028771	Soil	LNCVEDLDGVDIRLFAPAIGIAFGQHTACYPFGVAAGRDALWPEVARRVRGEMDHETVRINMARAAALVYLAAGIGGLELDAHDYSVMK
Ga0307305_103019702	3300028807	Soil	VTSSRFSGMASHLPRLKDLDGLDTRFLAPAAGFALGQRTASHPFGVAAGRDALGPERARRVRGEVDHDAVRVDVAHAAALVHLADGICGLELDPHDCSVMK
Ga0307305_105150422	3300028807	Soil	FAPAIGIAFGQHTACYPFGVAAGRDALWPEVARRVRGEMDHEAMRINMTRAAALVYLAAGIGGLELDAHDYSVMK
Ga0307286_100503742	3300028876	Soil	DIRLFAPAIGIAFGQRTACHPFSMAAGRDALGPEGARRMRGEMDHETMRINTARAAALVYLAAGIGGLELDAHYYSVMK
Ga0307304_105282061	3300028885	Soil	LPRLKYFDGRDTRFLAPAAGFAFGQRTASHPFSVVAGRDALGPALARRVRGEVNHDAVRVDVAQAAALVHLAGGIGGLEFDPHDCSVMK
Ga0170824_1078645652	3300031231	Forest Soil	ASHLPRLKDLDGLDTRFLAPAIGIAFGQRTACCPFGVAAGRDALGPEVARRVRGEMDYETVRINMACATALVHLAADIGGLELEAHDYSVMK
Ga0318516_105440892	3300031543	Soil	LNCVEDLDGLDIRFFAPAANIAFGKRTACRPFGVAAGGDALGPEVAWRVRGEMDHETVRINMACAAALVHLAAGIGGLELDAHDYSVMK
Ga0318541_100912361	3300031545	Soil	GLDIRFFAPTAGIAFGKRTACGPLGVAAGRDALGPELARWVRGEMDHETVRINMARTAALVHVAGRVGGLELDAHDYSVMK
Ga0318541_102066272	3300031545	Soil	LNCVEDLDGVDIRLFAPAIGIAFGQRMAFCPFGVTAGRDALGPEVARRMRGEMDHETVRINTARAAALVHLAAGIGGLELDAHDYSVMK
Ga0318528_101120491	3300031561	Soil	VPAKSHLPRLKDLDGLDIRIFAPAAGIAFGQRTASHPFGVAAGRDALGPELARRMRGEMDQETVRINTARAAALVHLAGCIGGLKLDAHDYSVMK
Ga0310915_100545163	3300031573	Soil	LTCVEDLDGVDIRLFAPAIGIAFGQRTAFCPFGVTAGRDALGPEVARRARGEMDHETVRINMACAAALVHLAAGIGGLELDAHEYSVMK
Ga0318574_101718361	3300031680	Soil	IRIFAPAAGIAFGQRTASHPFGVAAGRDALGPELARRMRGEMDQETVRINTARAAALVHLAGCIGGLKLDAHDYSVMK
Ga0306917_102092551	3300031719	Soil	IFAPAAGIAFGQRTASHPFGVAAGRDALGPELARRMRGEMDHEAARINTARAAALVHLAGRIGGLELNAHDYSVMK
Ga0306917_102460282	3300031719	Soil	LPRRKDLYGLDIRIFAPAAGFALGQRTASHPFGVAAGRNALGPELARRVRGEMDHETVGINMARAAALAHLAAGIGGLELDAHDYSVMK
Ga0306917_110328292	3300031719	Soil	SHLNCVEHLDGLDIRIFAPAAGIAFGQRTASHPFGVAAGRDALGPELARRVRGEMNHETVRINMARAAALVHLAVSIGGLELDAHDYSVMK
Ga0318500_101632932	3300031724	Soil	LDGVDIRSFAPAIGIVLDQRTAFCPFGVAAGRDALGPEVARRVRGEMDHETVRINMACAAALVHLAAGIGGLELDAHDDSVMK
Ga0318492_107868411	3300031748	Soil	GIVRGSWRSQIGGVGTASNLNCVEDLDGVDIRSFAPAIGIVLDQRTAFCPFGVAAGRDALGPEVARRARGEMDHETVRISMACAAALVHLAAGIGGLELDAHEYSVMK
Ga0318537_100867092	3300031763	Soil	LNCVEDLDGVDIRLLAPAIGIAFGQRTACRPFGVTAGRDALGPEVARRVRGEMDHETVRINVARAAALVHLAAGIGGLELDAHDYSVMK
Ga0318537_103252851	3300031763	Soil	LNCVEDLDGVDIRLFAPAIGIAFGQRMAFCPFGVTAGRDALGPEVARRMRGEMDHETVRINTARAAALVHLAAGIGGLELDAHDY
Ga0318526_100394902	3300031769	Soil	ASHLNCVEDLDGVDIRLFAPAIGIAFGQRTAFCPFGVAAGRDALGPEVARRVRGEMDHETVRINMARAAALVHLAAGIGGLELDAHDYSVMR
Ga0318547_105674521	3300031781	Soil	LKQLASSWLLTFENGITLPRIEDLDGLDIRFLAPAAGTPFGNRTACRPFGVAAGRDALGPELARRVRGEMDDDAMRVDVARAAALVHLAAGVGGLELDAHDYSVME
Ga0318548_103523382	3300031793	Soil	LPRLKDLDGLDIRFFAPTAGIAFGKRTACGPLGVAAGRDAPGPELARWVRGEMDHETVRINMARTAALVHVAGRVGGLELDAHDYSVMK
Ga0318499_101875601	3300031832	Soil	IRIFAPAAGIAFGQRTASHPFGVAAGRDALGPELARRVRGEMDHDAMRVDMARAAALVHFAVSIGGLELDAHDYSVMK
Ga0318495_102288271	3300031860	Soil	GSWRSQIGGVGTASHLNCVEDLDGVDIRLFAPAIGIAFGQRTAFCPFGVAAGRDALGPEVARRVRGEMDHETVRINMARAAALVHLAAGIGGLELDAHDYSVMR
Ga0306919_106924752	3300031879	Soil	LNCVNDLDGLDIRFFAPAAGIAFGKRTACGPFGVAAGRDALGPELARRVRGEMNHETVRINMARAAALVHLAVSIGGLELDAHNYYSVMK
Ga0306919_110288201	3300031879	Soil	ASCPGTASHLTCVEDLDGVDIRLFAPAIGIAFGQRTAFCPFGVTAGRDALGPEVARRARGEMDHETVRINMACAAALVHLAAGIGGLELDAHEYSVMK
Ga0306919_110491821	3300031879	Soil	RIFAPAAGIAFGQRTASHPFGVAAGRDALGPELARRVRGEMNHETVRINMARAAALVHLAVSIGGLELDAHDYSVMK
Ga0318544_102436681	3300031880	Soil	LNCVEDLDGLDIRIFAPAAGIAFGQRMACRPFGVAAGRDALGPEFARWVRGEMDHETVRIKMARTAALVHLAGRGGLELDAHNYSVMK
Ga0306925_103800252	3300031890	Soil	LNCVEDLDGLDVRILAPAGGLAFGQRTACRPFSVAAGRDALGPELAWRVRGKMDHDAMRVDVARAAALVHLAVSIGGLELDAHDYCVMK
Ga0306925_108795481	3300031890	Soil	FSPAIGIAFGQRTAFRPFGVVAGRDALGPEVARRVCGEMDHETVRINMARAAALVHLAADIGSLEFEAHDHSVMTSPR
Ga0318536_102414601	3300031893	Soil	VPAKSHLPRLKDLDGLDIRIFAPAAGIAFGQRTASHPFGVAAGRDALGPELARRMRGEMDQETVRINTACAAALVHLAGCIGGLKLDAHDYSVMK
Ga0318520_105896971	3300031897	Soil	IFAPAAGIAFGQRTASHPFGVAAGRDALGPELARRMRGEMDQETVRINTARAAALVHLAGCIGGLKLDAHDYSVMK
Ga0306923_103378481	3300031910	Soil	LNCVEHLDGLDIRIFAPAAGIAFGQRTASHPFGVAAGRDALGPELARRVRGEMNHETVRINMARAAALVHLAVSIGGLELDAHDYSVMK
Ga0306923_112282482	3300031910	Soil	LPRLEDLDGLDIRFFAPTAGIAFSKRTACGPLGVAAGRDALGPRLARWVRGEMDHETVRINMARTAALVHVAGRVGGLELDAHDYSVMK
Ga0306921_113776692	3300031912	Soil	LPRLEDLDGLDIRFFAPTAGIAFSKRTACGPLGVAAGRDALGPELARWVRGEMDHETVRINMARTAALVHVAGRVGGLELDAHDYSVMK
Ga0310913_100940894	3300031945	Soil	IFAPAAGIAFGQRTASHPFGVAAGRDALGPELARRMRGEMDQETVRINTACAAALVHLAGCIGGLKLDAHDYSVMK
Ga0310913_112105611	3300031945	Soil	LPRLEDLDGLDIRFFAPTAGIAFSKRTACGPLGVAAGRDALGPELARWVRGEMDHETVRINMARTAALVHVAGRVGGLELDAHDDSVMK
Ga0310910_104654571	3300031946	Soil	LNCVEDLDGLDIRIFAPAGGIAFGQRTASRPFGVAEGRDAPGPELARRVRGEMDHEAVRINTARAAALVHLAGRIGGLELDPVMGLAVR
Ga0310909_102073212	3300031947	Soil	LKDLDGLDIRIFAPAAGIAFGQRTASHPFGVAAGRDALGPELARRMRGEMDQETVRINTARAAALVHLAGCIGGLKLDAHDYSVMK
Ga0306922_105171262	3300032001	Soil	NCVEDLDGLDIRIFAPAAGIAFGQRTASHPFGVAAGRDALGPELARRVRGEMNHETVRINMARAAALVHLAVSIGGLELDAHDYSVMK
Ga0318556_103136132	3300032043	Soil	GTASHLNCVEDLDGLDIRIFAPAAGIAFGQRTASHPFGVAAGRDALGPELARRMRGEMDQETVRINTACAAALVHLAGCIGGLKLDAHDYSVMK
Ga0318532_101128781	3300032051	Soil	GTASNLNCVEDLDGVDIRLFAPAIGIAFGQRTAFCPFGVAAGRDALGPEVARRVRGEMDHETVRINMARAAALVHLAAGIGGLELDAHDYSVMR
Ga0318504_106568041	3300032063	Soil	LPRLEDLDDVDIRIFAPAAGSALGQRTASHPFGVAAGRDALGPELARRVRGEMDHETVRINMARAAALVHLAAGIGGLELDAHDCSVMK
Ga0306924_125739731	3300032076	Soil	LPHFKDLNGLDMRFLAPAVGLAFGHRTVSLLFGVAARRNAFGPELAWRVRGEVDHDAVRVDTPRAAACVHLAAGIDGLKLDAHDYSVME
Ga0318518_101905881	3300032090	Soil	CSGTASHLNCVEGLDGLDIRIFAPAAGIAFGQRTASHPFGVAAGRDALGPELARRMRGEMDQETVRINTARAAALVHLAGCIGGLKLDAHDYSVMK
Ga0318518_105409301	3300032090	Soil	LNCVEDLDGVDIRLLAPAIGIAFGQRTACRPFGVTAGRDALGPEVARRVRGEMDHETVRINMACAAALVHLAGGIGGLELDAHDCSNHRAQISAGAS
Ga0306920_1027012662	3300032261	Soil	MLATAGTMNCVEDLDGVDIRSFAPAIGIALDQRTAFCPFGVAAGRDALRPEVARRVRGEMDHETVRINMACAAARVHLAAGIGGLELDAHDYSVMK
Ga0306920_1032141771	3300032261	Soil	LNCVEDLDGVDIRLFAPAIGIAFGQRTACRPVGVAAGRDALGPEVARRVRGEMDQETVRINMARAAALVHFAAGIDGLELDAHEYSVMK
Ga0310914_107198371	3300033289	Soil	VRGSRRSQIGGVGTASNLNCVEDLDGVDIRLFAPAIGISLDQRTAFCPFGVAAGRDALGPEVARRVRGEMDHETVRINMACAAALVHLAAGIGGLELDAHEYSVMK
Ga0318519_106956211	3300033290	Soil	CSGTASHLNCIEDLDGLDMRILAPAGGLAFGQRTACRPFSVAAGRDALGPELAWRVRGKMDHDAMRVDVARAAALVHLAVSIGGLELDAHDYCVMK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069421

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences