Metagenome / Metatranscriptome Family F061315

Basic Information
Family ID	F061315
Family Type	Metagenome / Metatranscriptome
Number of Sequences	132
Average Sequence Length	43 residues
Representative Sequence	DAPSAELRARVRDPISLALSYGSGLLLVAVLALMIWKPGA
Number of Associated Samples	115
Number of Associated Scaffolds	132

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	3.03 %
% of genes from short scaffolds (< 2000 bps)	2.27 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Most Common Taxonomy
Group	Unclassified (98.485 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (29.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.788 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.12% β-sheet: 0.00% Coil/Unstructured: 55.88%
Feature Viewer

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Pfam ID	Name	% Frequency in 132 Family Scaffolds
PF00120	Gln-synt_C	12.12
PF10027	DUF2269	2.27
PF16363	GDP_Man_Dehyd	0.76
PF03951	Gln-synt_N	0.76
PF14693	Ribosomal_TL5_C	0.76
PF06271	RDD	0.76

COG ID	Name	Functional Category	% Frequency in 132 Family Scaffolds
COG0174	Glutamine synthetase	Amino acid transport and metabolism [E]	0.76
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.76

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.48 %
All Organisms	root	All Organisms	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.48 %
cellular organisms	root	All Organisms → cellular organisms	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.48 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.48 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.48 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.76 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100616042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300012951\|Ga0164300_11148592	Not Available	511	Open in IMG/M
3300012960\|Ga0164301_11169041	Not Available	616	Open in IMG/M
3300012989\|Ga0164305_10054956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2352	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.00%
Host-Associated	Host-Associated	25.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.97%
Plants	Host-Associated → Plants	25.00%
Aquatic	Environmental → Aquatic	3.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.39%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.85%
Sediment	Environmental → Aquatic → Sediment	2.27%
Marine	Environmental → Aquatic → Marine	0.76%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.76%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.76%
Roots	Host-Associated → Plants → Roots	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.09%
Loam	Environmental → Terrestrial → Soil → Loam	7.58%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.27%
Sand	Environmental → Terrestrial → Soil → Sand	1.52%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.76%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.76%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.76%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.76%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.76%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.21%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.30%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.27%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.52%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.76%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.76%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.76%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.76%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.76%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.76%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.58%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.06%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.79%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.03%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.03%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.27%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.27%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.52%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.52%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.52%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.76%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.76%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.76%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.76%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.76%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.76%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.76%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.76%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.76%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.76%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001534	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1006160421	3300000364	Soil	GDAPSPELQARVRDPISLALSYGSGLVLVAVLALMVWKPGA*
JGI10214J12806_102162923	3300000891	Soil	AGDAPSAELRARVHDPISLALSYGSGLLLVAVLALMIWKPGA*
JGI10214J12806_107732573	3300000891	Soil	LAAAGDTPSQELTARLRDPVWLALSWGSGIVVLAILALMIWKPGA*
JGI10216J12902_1069972261	3300000956	Soil	PSAELRARLRDPVTLFLSYGSALVIVAMVAIMVWKPGA*
JGI10216J12902_1109072861	3300000956	Soil	LVASGDAPSPELRRRVRDPVSLALSYGSGLVLVALLAIMIWKPGA*
JGI10216J12902_1158613033	3300000956	Soil	RELAAAGDAPSPELRARVRDPVSLALSYGSGLLLVTILALMIWKPGA*
A15PFW1_109870273	3300001534	Permafrost	MAQGDAPSPELRARVRDPITLACNYGSGLILVALLAIMIWKPGA*
C688J35102_1182747182	3300002568	Soil	AGQGDSPSLELRARLRDPLSLALSYGSGAVVIAILALMIWKPGS*
Ga0055455_102869821	3300003990	Natural And Restored Wetlands	ERLAAEGGRPSTELQARLRDPTSLVLSYGSGVAVLAILVLMIWKPGS*
Ga0062591_1007529863	3300004643	Soil	LAAEGDQPSPELRASLRDPITLAMSWGSGAIVIVILVLMIWKPGH*
Ga0062591_1021160142	3300004643	Soil	LARELAAAGDAPSAELRARVHDPISLALSYGSGLLLVAVLALMIWKPGA*
Ga0062594_1005751073	3300005093	Soil	RLAAQGDQPSPELRARLRDPLTLALSYGSGLAVLAILALMIWKPGS*
Ga0062594_1030367001	3300005093	Soil	SEGDAPSPELRARLRDPKGLALVWTSFLLTLAILVLMIWKPGA*
Ga0066685_107854991	3300005180	Soil	RFLAERLAAEGDEPSRELRRRLRDPLTLALSWSSGALTLAILGLMIWKPGA*
Ga0066676_104308221	3300005186	Soil	KQVRELAERLAAEGDVPSAELSKRLRDPVWLALSWGSGLVVIAILALMIWKPGH*
Ga0070713_1006394851	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	EGDQPSPELRASLRDPVTLAMSWGSGLVVVAILVVMIWKPGH*
Ga0070711_1018775932	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RELAASGDAPNAELKARVRDPVSLALSYGSGLVLVVILALMVWKPGA*
Ga0070694_1005299541	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	ASGDAPSAELQARLRDPVSLALSYGSGLVLVIVLALMVWKPGA*
Ga0070707_1012028721	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AAEGDAPSTELRARMRDPVTLALSWGSGLVVVAILAIMIWKPGH*
Ga0073909_103286581	3300005526	Surface Soil	QELSARLRDPMWLALSWGSGIVVIAILALMIWKPGA*
Ga0070741_112786611	3300005529	Surface Soil	AREGDAPSEELRSTLRDPLSYALNFGSGLVVFAVLALMIWKPGS*
Ga0068856_1005973961	3300005614	Corn Rhizosphere	QGDAPSAELHARVRDPISLAGSYGSGLILVALLAIMIWKPGA*
Ga0066905_1003265514	3300005713	Tropical Forest Soil	ELAEQLAAQGDQPSPELRARLRDPVTLALSWGSGVVVVVILILMIWKPGH*
Ga0068863_1022871141	3300005841	Switchgrass Rhizosphere	ETRVLAERLASEGDAPSTELRARMRDPLTLALSWGSGVVVIAILALMIWKPGH*
Ga0068858_1011637483	3300005842	Switchgrass Rhizosphere	ASGDAPSAELKARVRDPISLMLSYGSGLVLVAVLALMVWKPGA*
Ga0081539_103714372	3300005985	Tabebuia Heterophylla Rhizosphere	RPSDELRARLHDPVALALNAASTLALVILLALMVWKPGA*
Ga0070717_106369421	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AAEGDQPSPELRASLRDPVTLAMSWGSGLVVVAILVVMIWKPGH*
Ga0075432_102062781	3300006058	Populus Rhizosphere	GDQPSPELRASLRDPITLAMSWGSGAIVVVILVLMIWKPGH*
Ga0070715_103385423	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	RALAAAGDEPSAELRARVRDPISLALSYGSGLLLVLVLALMIWKPGA*
Ga0075367_108293682	3300006178	Populus Endosphere	RLAAEGDQPSPELRASLRDPITLAMSWGSGAIVVVILVLMIWKPGH*
Ga0074048_124988551	3300006581	Soil	AGDAPSAELLERVRDPVALVLNYGSGLLLVAILAIMIWKPGA*
Ga0074057_100450751	3300006605	Soil	DRHTRALAEQLAASGDQPSTELASRLHERGTLLLSYGSGAAVIAILVLMIWKPGS*
Ga0075421_1015104142	3300006845	Populus Rhizosphere	SPELRRRLRDPVWLALSYGSGLVLVAILAIMIWKPGA*
Ga0075433_116005242	3300006852	Populus Rhizosphere	GGDEPSADLKRRLRDPVSLALSYGSGLVLVAILAIMIWKPGA*
Ga0068865_1007579061	3300006881	Miscanthus Rhizosphere	APSQELSARLRDPMWLALSWGSGVVVIAILALMVWKPGA*
Ga0066710_1032804662	3300009012	Grasslands Soil	ELAERLAAEGDVPSAELSKRLRDPVWLALSWGSGLVVIAILALMIWKPGH
Ga0066709_1017383441	3300009137	Grasslands Soil	DAPSPELEARLPDPLTLALSYGGGVAILAILVIMIWKPGA*
Ga0111538_122647133	3300009156	Populus Rhizosphere	AEELAAKGDAPSVALKERLRDPISLILSYFGGAAVIAALVLMVWKPGA*
Ga0105242_105722501	3300009176	Miscanthus Rhizosphere	DTPSQELTARLRDPVWLALSWGSGIAIIAILALMIWKPGA*
Ga0105248_120558891	3300009177	Switchgrass Rhizosphere	ELRARVRDPISLMLSYGSGLVLVAVLALMVWKPGA*
Ga0105238_102347061	3300009551	Corn Rhizosphere	GDAPSAELTARLRDPVWLALSWGSGIVVLVILALMIWKPGT*
Ga0126374_104682391	3300009792	Tropical Forest Soil	ARRLAAEGDAPSDELRARVHHPISLALSYGSGLLLVAVLALMIWKPGA*
Ga0126374_113466311	3300009792	Tropical Forest Soil	DAPSAELRARVRDPISLALSYGSGLLLVAVLALMIWKPGA*
Ga0105058_10188181	3300009837	Groundwater Sand	AERLAADGDQPSAELSERLRDPVALAMNWSSGLVAVAILGLMIWKPGA*
Ga0126305_108411512	3300010036	Serpentine Soil	ELHAHLRDPLSLGLSWGSGVVVVVILALMIWKPGT*
Ga0126304_102354801	3300010037	Serpentine Soil	REKETRRLAERLAAEGDAPSDELHARLRDPLSLGLSWGSGVVVVVILALMIWKPGT*
Ga0126312_108605962	3300010041	Serpentine Soil	DTGLRVRLRDPVTLALEYSSGLAILVILVLMIWKPGQ*
Ga0126314_111794231	3300010042	Serpentine Soil	HELAEEGDAPSAVIRRRVRDPLSLALSYGAGILMVAVLALMVWKPGA*
Ga0126310_100952323	3300010044	Serpentine Soil	AELRARVHDPISLALSYGSGLILIVILALMTWKPGA*
Ga0134071_103538553	3300010336	Grasslands Soil	ATGGDQPSPELQARLRDPVTLALSWGSGAVVIVILALMIWKPGA*
Ga0126377_113446191	3300010362	Tropical Forest Soil	LRARVRDPISLTLSYGSGLLLVLVLALMIWKPGA*
Ga0126377_134329912	3300010362	Tropical Forest Soil	LLARLRDPRTLALDYGSGVVLVVVLALMVWKPGS*
Ga0126379_122985092	3300010366	Tropical Forest Soil	LAAEGDQPSSELRGRLRDPVTLAMSWGSGLAVIGILALMIWKPGH*
Ga0134128_129855972	3300010373	Terrestrial Soil	SRTAELAARIASEGDEPTTELRRRLRDPLSLAYNFGSGLVVLAILGLMIWKPGS*
Ga0134126_116050931	3300010396	Terrestrial Soil	ELTARLRDPVWLALSWCSGIVIIVILALMIWKPGA*
Ga0134121_110618533	3300010401	Terrestrial Soil	DEPIAELRARVHDPISLALSYGSGLLLVLVLALMIWKPGA*
Ga0138514_1000719562	3300011003	Soil	DQPSAELRARMRDPLSLALSYGSGLAILAMLAIMIWKPGE*
Ga0137388_104432091	3300012189	Vadose Zone Soil	DAPSRELKARLRDPATLVLSYGAGVAILGILALMIWKPGA*
Ga0137364_101098991	3300012198	Vadose Zone Soil	LQARLRDPLTLALSWGSGTVVIVILALMIWKPGA*
Ga0150985_1053818011	3300012212	Avena Fatua Rhizosphere	SPELRSSLRDPITLAMSWGSGAVVVVILVLMIWKPGH*
Ga0150985_1096210161	3300012212	Avena Fatua Rhizosphere	ELQARVRDPISLAGSYGSGLILVALLAIMIWKPGA*
Ga0137387_101368271	3300012349	Vadose Zone Soil	AAEGDAPSRELTARLRDPVWLALSWGSGIVIVAILALMIWKPGA*
Ga0137366_105209432	3300012354	Vadose Zone Soil	MQQETRILAERLAAEGDAPSQELRARLHDRVALALSWSSGFAALAILALMIWKPGA*
Ga0137375_111299071	3300012360	Vadose Zone Soil	RLAAQGDAPSPELRARLRDPVALALSWSSGLAALAILAMMIWKPGA*
Ga0137361_117153021	3300012362	Vadose Zone Soil	ERKVRELAERLTAEGDLPSPELSARLRDPIWLAVSWSSGIAAIAILALMIWKPGA*
Ga0150984_1135388201	3300012469	Avena Fatua Rhizosphere	PELRARVHDPVSLALSYGSGLVLVIVLALMIWKPGA*
Ga0137373_101616924	3300012532	Vadose Zone Soil	SELAARVRDPVALSLNIASSLLGFAILAVMIWKPGAGG*
Ga0137404_106299933	3300012929	Vadose Zone Soil	GREKQTRELAERLAAEGDAPSKELSSRLRDPVWLALSWGSGVVIIAILALMIWKPGT*
Ga0164300_104975241	3300012951	Soil	ASGDAPSAELRARVHDPISLALSYGSGLVLIAVLALMVWKPGA*
Ga0164300_111485921	3300012951	Soil	LAGSGDAPSPELRARVHDPISLALSYGSGLVLIVVLALMIWKPGA*
Ga0164298_104481243	3300012955	Soil	VRQPPRQELSARLRDPMWLALSWGSGIVVIAILALMIWKPGA*
Ga0164303_100946221	3300012957	Soil	QLAERLAAEGDAPSQELSARLRDPTWLALSWGSGVVVIAILALMIWKPGA*
Ga0164303_107920662	3300012957	Soil	LASSLDELAASGDAPSAELRARVHDPISLALSYGSGLVLIAVLALMVWRPGA*
Ga0164299_100585481	3300012958	Soil	ELTARLRDPVWLGLSWGSGIVILVILALMIWKPGT*
Ga0164301_111690411	3300012960	Soil	RQARVRDPISLALSYGSGLVLIAGLALMVWKPGA*
Ga0134077_104840462	3300012972	Grasslands Soil	AELRARVRDPVALSLNIVSSLLGLAILVVMIWKPGAPG*
Ga0164309_101522354	3300012984	Soil	LAAEGDTLSQELTARLRDPVWLALSWASGIVIVAILALMIWKPGA*
Ga0164308_101462261	3300012985	Soil	LSARLRDPMWLALSWGSGIVVIAILALMIWKPGA*
Ga0164307_101243301	3300012987	Soil	APSAELTARLHDPVWLALSWGSGIVILVILALMIWKPGT*
Ga0164307_111198211	3300012987	Soil	EELAAGSNVATPELRARMRDTRTLALSYGSGLMLVAVLALMVWKPGA*
Ga0164305_100549561	3300012989	Soil	SPELKARVHDPISLALSYGSGLVLIAVLALMVWKPGA*
Ga0157379_114384732	3300014968	Switchgrass Rhizosphere	SAELRARVHDPISLALSYGSGLLLVLVLALMIWKPGA*
Ga0132256_1036508152	3300015372	Arabidopsis Rhizosphere	AERLAVEGDAPSPELHAGLRDPVTLALSWGSGLLFVVVLALMIWKPGH*
Ga0132257_1020222021	3300015373	Arabidopsis Rhizosphere	APSAELGARLRDPTTLALEYSSGLAVLVILVLMVWKPGA*
Ga0187779_104161233	3300017959	Tropical Peatland	GDVASEDLRARLRDPATLALSFGSGVIVFVILVLMIWKPGS
Ga0184610_12738461	3300017997	Groundwater Sediment	RLASEGDAPSQELSARLRDPVWLALSWGSGIVIVAILALMIWKPGA
Ga0184621_101893562	3300018054	Groundwater Sediment	APSAELQARVRDPITLACNYGSGLILVALLALMIWKPGA
Ga0184619_100111681	3300018061	Groundwater Sediment	LAAEGDQPSTELHARLRDPLTLALSWGSGAVVIVILALMIWKPGA
Ga0193730_11748951	3300020002	Soil	SPELRARVRDPISLTLSYGSGLLLIAVLALMIWKPGA
Ga0213880_101535582	3300021953	Exposed Rock	GGDAPSGELKARLRDPVSLALSYGGGLAVLAIFVLMLSKPGS
Ga0207645_110320541	3300025907	Miscanthus Rhizosphere	PELRSRVRDPISLALSYGSGLVLVAILAIMIWKPGA
Ga0207643_110667022	3300025908	Miscanthus Rhizosphere	ELRARVHDPISLALSYGSGLLLVLVLALMIWKPGA
Ga0207663_108289421	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	TLSTELRARMRDPLTLALSWGSGVVVIAILALMIWKPGH
Ga0207687_110569031	3300025927	Miscanthus Rhizosphere	LAAGSNEATPELRARMRDPRTLALSYGSGLMLVAILALMVWRPGS
Ga0207700_106421621	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	RLAAEGDQPSPELRASLRDPVTLAMSWGSGLVVVAILVVMIWKPGH
Ga0207686_106041493	3300025934	Miscanthus Rhizosphere	QELTARLRDPVWLALSWGSGIAIIAILALMIWKPGA
Ga0207704_107074183	3300025938	Miscanthus Rhizosphere	APSQELSARLRDPMWLALSWGSGVVVIAILALMVWKPGA
Ga0207704_109747322	3300025938	Miscanthus Rhizosphere	QGDAPSPELRSRVRDPISLALSYGSGLVLVAILAIMIWKPGA
Ga0207711_113544032	3300025941	Switchgrass Rhizosphere	ASGDAPSAELKARVRDPISLMLSYGSGLVLVAVLALMVWKPGA
Ga0207679_110558162	3300025945	Corn Rhizosphere	SGDAPSAELQARLRDPVSLALSYGSGLVLVIVLALMVWKPGA
Ga0207668_112130833	3300025972	Switchgrass Rhizosphere	DAPSAELTARLRDPVWLALSWGSGIVVLVILALMIWKPGT
Ga0207640_110429412	3300025981	Corn Rhizosphere	ELKARVHDPISLALSYGSGLVLIAVLALMVWKPGA
Ga0207683_105788311	3300026121	Miscanthus Rhizosphere	VLAERLASEGDAPSTELRPRMRDPLTLALSWGSGVVVIAILALMIWKPGH
Ga0209160_12897541	3300026532	Soil	PELKARLRDPATLVLSYGAGVAILGILALMIWKPGA
Ga0209577_108258162	3300026552	Soil	QGDQPSAELRTRLRDPVSLALSWGSGLAVVAILALMIWKPGG
Ga0209842_10606242	3300027379	Groundwater Sand	RLAADGDQPSAELSERVRDPVALAMSWSSGLVAVAILGLMIWKPGA
Ga0209811_103141142	3300027821	Surface Soil	PTQELSARLRDPMWLALSWGSGIVVIAILALMIWKPGA
Ga0268266_115853501	3300028379	Switchgrass Rhizosphere	SAELKARVRDPISLMLSYGSGLVLVAVLALMVWKPGA
Ga0307291_10843442	3300028707	Soil	ELRARVHDPVSLALSYGSGLVLIAILALMIWKPGA
Ga0307293_101193093	3300028711	Soil	LAAQGDAPSPELRSRVRDPISLALSYGSGLVLVAILAIMIWKPGA
Ga0307309_100951233	3300028714	Soil	LALEGDAPSQELSARLRDPMWLALSWGSGVVVIAILALMIWKPGA
Ga0307313_100237213	3300028715	Soil	DAPSPELRSRVRDPISLALSYGSGLVLVAILAIMIWKPGA
Ga0307311_100995733	3300028716	Soil	FAEELATQGDAPSAELRSRVRDPITLACNYGSGLILIALLAIMIWKPGA
Ga0307319_100136414	3300028722	Soil	AASGDAPSAELRGRVRDPISLALSYGSGLVLVALLAIMIWKPGA
Ga0307280_102175041	3300028768	Soil	EDETRKLAERLAAEGDVSSGELRARLRDPVTLALEYSSGLAVVVILVLMIWKPGG
Ga0307306_100355641	3300028782	Soil	SGDAPSQELKARVRDPISLTLSYGSGLVLIAVLALMVWKPGA
Ga0307323_101070153	3300028787	Soil	GDAPSVALKQRLRDPISLILSYFGGVAVIAALVLMVWKPGA
Ga0307323_101735091	3300028787	Soil	ELVAQGDAPSAELRARVRDPITLICNYGSGLILVALLAIMIWKPGA
Ga0265338_102174054	3300028800	Rhizosphere	DVATAELRSRLRDPVALLLSWGSGGATLAVLALMIWKPGA
Ga0307294_102890611	3300028810	Soil	GDAPSAELQARVRDPITLACNYGSGLILVALLALMIWKPGA
Ga0307294_103697492	3300028810	Soil	TPSQELTARLRDPVWLALSWGSGIVIVAILALMIWKPGA
Ga0307312_101894651	3300028828	Soil	PSPELKARVRDPISLTLSYGSGLVLIAVLALMVWKPGA
Ga0307312_106512871	3300028828	Soil	AGGDAPSPELRARLRDPISLALSWGSGVVVVVILALMIWKPGA
Ga0307312_109387382	3300028828	Soil	MAERLAREGDAPSSELRARLHNPVALALSWSSGLATLAILALMIWKPGA
Ga0307286_103407272	3300028876	Soil	SPELRARVHDPVSLALSYGSGLVLIAILALMIWKPGA
Ga0307308_106182401	3300028884	Soil	EKKVRELAERLTAEGDVPNADLSARLRDPVLLALSWGSGIVVIAILALMIWKPGA
Ga0307304_105740191	3300028885	Soil	LTAEGDVPSPELSARLRDPVWLAVSWGSGIVVIAILALMIWKPGA
Ga0307304_106166052	3300028885	Soil	GGKREDETRKLAERLAAEGDVSSGELRARLRDPVTLALEYSSGLAVVVILVLMIWKPGG
Ga0307499_103194382	3300031184	Soil	PSAELTARLRDPVWLALSWGSGIVILVILALMIWKPGT
Ga0308174_115704502	3300031939	Soil	APSGALRARLRDPVSLTLSYGSGLAVLLIVADMIWKPGA
Ga0307409_1019926262	3300031995	Rhizosphere	AAGDAPSAELRARVHDPISLALSYGSGLILIVILALMTWKPGA
Ga0307470_118332401	3300032174	Hardwood Forest Soil	TAKFAAELAAQGDAPSPELRSRVRDPISLALSYGSGLVLVAILAIMIWKPGA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F061315

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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