NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F058102

Metagenome Family F058102

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F058102
Family Type Metagenome
Number of Sequences 135
Average Sequence Length 65 residues
Representative Sequence MSSKAQAVIEEFNRLPQSEQLAVYEAIARKVTPASYGPLSDEDLTAIAAETFALLDEEESRAQSR
Number of Associated Samples 102
Number of Associated Scaffolds 135

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 21.64 %
% of genes near scaffold ends (potentially truncated) 26.67 %
% of genes from short scaffolds (< 2000 bps) 68.89 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (75.556 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen
(10.370 % of family members)
Environment Ontology (ENVO) Unclassified
(38.519 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.889 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 53.76%    β-sheet: 0.00%    Coil/Unstructured: 46.24%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 135 Family Scaffolds
PF02452PemK_toxin 29.63
PF13274DUF4065 2.22
PF14099Polysacc_lyase 1.48
PF04198Sugar-bind 1.48
PF07638Sigma70_ECF 1.48
PF00814TsaD 1.48
PF10543ORF6N 0.74
PF13088BNR_2 0.74
PF02729OTCace_N 0.74
PF17132Glyco_hydro_106 0.74
PF02608Bmp 0.74
PF01455HupF_HypC 0.74
PF00903Glyoxalase 0.74
PF07495Y_Y_Y 0.74
PF17189Glyco_hydro_30C 0.74
PF00899ThiF 0.74
PF13500AAA_26 0.74
PF06071YchF-GTPase_C 0.74
PF00486Trans_reg_C 0.74
PF01402RHH_1 0.74
PF00011HSP20 0.74
PF01609DDE_Tnp_1 0.74
PF13360PQQ_2 0.74
PF00012HSP70 0.74
PF01909NTP_transf_2 0.74
PF08327AHSA1 0.74
PF02780Transketolase_C 0.74
PF00180Iso_dh 0.74
PF01408GFO_IDH_MocA 0.74
PF13478XdhC_C 0.74
PF12215Glyco_hydr_116N 0.74
PF01833TIG 0.74
PF13395HNH_4 0.74
PF03484B5 0.74
PF09723Zn-ribbon_8 0.74
PF13709DUF4159 0.74
PF02738MoCoBD_1 0.74
PF14714KH_dom-like 0.74
PF11026DUF2721 0.74
PF00202Aminotran_3 0.74
PF13240zinc_ribbon_2 0.74
PF01977UbiD 0.74
PF02416TatA_B_E 0.74
PF07637PSD5 0.74
PF07690MFS_1 0.74
PF13544Obsolete Pfam Family 0.74
PF00483NTP_transferase 0.74
PF00724Oxidored_FMN 0.74
PF06250YhcG_C 0.74
PF00575S1 0.74
PF03720UDPG_MGDP_dh_C 0.74
PF07963N_methyl 0.74
PF12894ANAPC4_WD40 0.74
PF13419HAD_2 0.74
PF07586HXXSHH 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 135 Family Scaffolds
COG2337mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin moduleDefense mechanisms [V] 29.63
COG0533tRNA A37 threonylcarbamoyltransferase TsaDTranslation, ribosomal structure and biogenesis [J] 1.48
COG1214tRNA A37 threonylcarbamoyladenosine modification protein TsaBTranslation, ribosomal structure and biogenesis [J] 1.48
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 1.48
COG2390DNA-binding transcriptional regulator LsrR, DeoR familyTranscription [K] 1.48
COG0012Ribosome-binding ATPase YchF, GTP1/OBG familyTranslation, ribosomal structure and biogenesis [J] 0.74
COG0042tRNA-dihydrouridine synthaseTranslation, ribosomal structure and biogenesis [J] 0.74
COG00433-polyprenyl-4-hydroxybenzoate decarboxylaseCoenzyme transport and metabolism [H] 0.74
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 0.74
COG0072Phenylalanyl-tRNA synthetase beta subunitTranslation, ribosomal structure and biogenesis [J] 0.74
COG0298Hydrogenase maturation factor HybG, HypC/HupF familyPosttranslational modification, protein turnover, chaperones [O] 0.74
COG0443Molecular chaperone DnaK (HSP70)Posttranslational modification, protein turnover, chaperones [O] 0.74
COG0642Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.74
COG1744Lipoprotein Med, regulator of KinD/Spo0A, PBP1-ABC superfamily, includes NupNSignal transduction mechanisms [T] 0.74
COG1826Twin-arginine protein secretion pathway components TatA and TatBIntracellular trafficking, secretion, and vesicular transport [U] 0.74
COG19022,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) familyEnergy production and conversion [C] 0.74
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.74
COG3293TransposaseMobilome: prophages, transposons [X] 0.74
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.74
COG4804Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 familyGeneral function prediction only [R] 0.74
COG5421TransposaseMobilome: prophages, transposons [X] 0.74
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.74
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.74

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms75.56 %
UnclassifiedrootN/A24.44 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000567|JGI12270J11330_10267020All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300000567|JGI12270J11330_10267403All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300001213|JGIcombinedJ13530_101342931All Organisms → cellular organisms → Bacteria982Open in IMG/M
3300002183|JGI24145J26757_10033538Not Available1222Open in IMG/M
3300005529|Ga0070741_10001938All Organisms → cellular organisms → Bacteria58370Open in IMG/M
3300005534|Ga0070735_10174451All Organisms → cellular organisms → Bacteria1325Open in IMG/M
3300005576|Ga0066708_10831215All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300005994|Ga0066789_10436096All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales547Open in IMG/M
3300006055|Ga0097691_1043083All Organisms → cellular organisms → Bacteria1634Open in IMG/M
3300006638|Ga0075522_10476497All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300009012|Ga0066710_104303799Not Available532Open in IMG/M
3300009444|Ga0114945_10021359All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae3459Open in IMG/M
3300009502|Ga0114951_10332824Not Available772Open in IMG/M
3300009552|Ga0116138_1004448All Organisms → cellular organisms → Bacteria5999Open in IMG/M
3300009630|Ga0116114_1150314Not Available595Open in IMG/M
3300009637|Ga0116118_1256216Not Available536Open in IMG/M
3300009639|Ga0116122_1083414All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1049Open in IMG/M
3300009700|Ga0116217_10148161All Organisms → cellular organisms → Bacteria1569Open in IMG/M
3300009868|Ga0130016_10011219All Organisms → cellular organisms → Bacteria14778Open in IMG/M
3300010341|Ga0074045_10272306All Organisms → cellular organisms → Bacteria1115Open in IMG/M
3300010343|Ga0074044_10389306All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300010379|Ga0136449_100567400All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium1946Open in IMG/M
3300010379|Ga0136449_102301249All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300011270|Ga0137391_11436690Not Available535Open in IMG/M
3300012210|Ga0137378_11414002All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300012361|Ga0137360_10662473Not Available895Open in IMG/M
3300012362|Ga0137361_10115606All Organisms → cellular organisms → Bacteria2357Open in IMG/M
3300012923|Ga0137359_10549426All Organisms → cellular organisms → Bacteria1016Open in IMG/M
3300014155|Ga0181524_10449947Not Available554Open in IMG/M
3300014155|Ga0181524_10501573Not Available516Open in IMG/M
3300014158|Ga0181521_10012423All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria8005Open in IMG/M
3300014160|Ga0181517_10018091All Organisms → cellular organisms → Bacteria4991Open in IMG/M
3300014489|Ga0182018_10211232All Organisms → cellular organisms → Bacteria1081Open in IMG/M
3300014489|Ga0182018_10578280All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300014490|Ga0182010_10414689All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300014491|Ga0182014_10012890All Organisms → cellular organisms → Bacteria7911Open in IMG/M
3300014491|Ga0182014_10056486All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae → unclassified Phycisphaeraceae → Phycisphaeraceae bacterium2645Open in IMG/M
3300014492|Ga0182013_10042734All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3564Open in IMG/M
3300014493|Ga0182016_10545372Not Available665Open in IMG/M
3300014494|Ga0182017_10189894All Organisms → cellular organisms → Bacteria1316Open in IMG/M
3300014496|Ga0182011_10211952Not Available1314Open in IMG/M
3300014498|Ga0182019_10020926All Organisms → cellular organisms → Bacteria3572Open in IMG/M
3300014498|Ga0182019_10052505All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2366Open in IMG/M
3300014498|Ga0182019_10158658All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium1438Open in IMG/M
3300014501|Ga0182024_10094192All Organisms → cellular organisms → Bacteria4393Open in IMG/M
3300014502|Ga0182021_10622231All Organisms → cellular organisms → Bacteria1293Open in IMG/M
3300014502|Ga0182021_12447649Not Available628Open in IMG/M
3300014839|Ga0182027_10001059All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula46357Open in IMG/M
3300014839|Ga0182027_10003664All Organisms → cellular organisms → Bacteria24158Open in IMG/M
3300014839|Ga0182027_10006406All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales17616Open in IMG/M
3300014839|Ga0182027_10280000All Organisms → cellular organisms → Bacteria1895Open in IMG/M
3300014839|Ga0182027_10291414All Organisms → cellular organisms → Bacteria1850Open in IMG/M
3300017935|Ga0187848_10035958All Organisms → cellular organisms → Bacteria2464Open in IMG/M
3300017935|Ga0187848_10076552All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1557Open in IMG/M
3300017941|Ga0187850_10001144All Organisms → cellular organisms → Bacteria30177Open in IMG/M
3300017988|Ga0181520_10161234All Organisms → cellular organisms → Bacteria1810Open in IMG/M
3300017988|Ga0181520_10237638All Organisms → cellular organisms → Bacteria1403Open in IMG/M
3300017988|Ga0181520_10743419All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300017988|Ga0181520_10948745Not Available572Open in IMG/M
3300018017|Ga0187872_10029083All Organisms → cellular organisms → Bacteria3106Open in IMG/M
3300018021|Ga0187882_1136954All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300018021|Ga0187882_1322588All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300018023|Ga0187889_10192342All Organisms → cellular organisms → Bacteria943Open in IMG/M
3300018024|Ga0187881_10360708All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia598Open in IMG/M
3300018038|Ga0187855_10754689Not Available567Open in IMG/M
3300018088|Ga0187771_11176548All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300019785|Ga0182022_1144009All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1217Open in IMG/M
3300020084|Ga0194110_10040714All Organisms → cellular organisms → Bacteria4337Open in IMG/M
3300021171|Ga0210405_10108351All Organisms → cellular organisms → Bacteria2193Open in IMG/M
3300021405|Ga0210387_10683261All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300021602|Ga0194060_10022059All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3941Open in IMG/M
3300022524|Ga0224534_1008087All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae → unclassified Phycisphaeraceae → Phycisphaeraceae bacterium3506Open in IMG/M
3300022555|Ga0212088_10001546All Organisms → cellular organisms → Bacteria50514Open in IMG/M
3300022563|Ga0212128_10064283All Organisms → cellular organisms → Bacteria2366Open in IMG/M
3300023101|Ga0224557_1185151All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300023101|Ga0224557_1306379Not Available503Open in IMG/M
3300025444|Ga0208189_1021324All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1387Open in IMG/M
3300025548|Ga0208716_1058944All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300025619|Ga0207926_1138187Not Available559Open in IMG/M
3300025664|Ga0208849_1134720All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300025852|Ga0209124_10107153Not Available1152Open in IMG/M
3300027854|Ga0209517_10011231All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula9786Open in IMG/M
3300027854|Ga0209517_10126610All Organisms → cellular organisms → Bacteria1672Open in IMG/M
3300027896|Ga0209777_10611832Not Available787Open in IMG/M
3300027903|Ga0209488_10376425All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales1053Open in IMG/M
3300027905|Ga0209415_10603860All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300027905|Ga0209415_11075357All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium526Open in IMG/M
3300027908|Ga0209006_10072845All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula3062Open in IMG/M
3300028146|Ga0247682_1009117All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1711Open in IMG/M
3300028800|Ga0265338_10502117Not Available854Open in IMG/M
3300028800|Ga0265338_10796000Not Available648Open in IMG/M
3300028866|Ga0302278_10095805All Organisms → cellular organisms → Bacteria1665Open in IMG/M
3300029882|Ga0311368_10904840Not Available591Open in IMG/M
3300029889|Ga0246001_1020672All Organisms → cellular organisms → Bacteria1927Open in IMG/M
3300029910|Ga0311369_11116147Not Available615Open in IMG/M
3300029922|Ga0311363_10098868All Organisms → cellular organisms → Bacteria4029Open in IMG/M
3300029952|Ga0311346_10059696All Organisms → cellular organisms → Bacteria5335Open in IMG/M
3300029952|Ga0311346_11166751Not Available604Open in IMG/M
3300030399|Ga0311353_10010236All Organisms → cellular organisms → Bacteria11164Open in IMG/M
3300030399|Ga0311353_10866272All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300030503|Ga0311370_10173981All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula2933Open in IMG/M
3300030518|Ga0302275_10046898All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3279Open in IMG/M
3300030518|Ga0302275_10559532Not Available561Open in IMG/M
3300031057|Ga0170834_111908843All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300031128|Ga0170823_17080730All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300031231|Ga0170824_109162209All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300031234|Ga0302325_12560751Not Available606Open in IMG/M
3300031236|Ga0302324_102674050All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300031236|Ga0302324_103247326All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300031525|Ga0302326_12542962Not Available641Open in IMG/M
3300031708|Ga0310686_109023455All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula3752Open in IMG/M
3300031708|Ga0310686_110232958Not Available811Open in IMG/M
3300031708|Ga0310686_117717307All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300031718|Ga0307474_11418189All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300031753|Ga0307477_10194959Not Available1410Open in IMG/M
3300032069|Ga0315282_10027563All Organisms → cellular organisms → Bacteria7415Open in IMG/M
3300032070|Ga0315279_10036684All Organisms → cellular organisms → Bacteria4869Open in IMG/M
3300032160|Ga0311301_10265869All Organisms → cellular organisms → Bacteria2802Open in IMG/M
3300032160|Ga0311301_10671107All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium1468Open in IMG/M
3300032256|Ga0315271_11551006All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300032397|Ga0315287_11740212All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300032515|Ga0348332_13994759All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300032893|Ga0335069_10530349All Organisms → cellular organisms → Bacteria1361Open in IMG/M
3300033004|Ga0335084_10780396Not Available971Open in IMG/M
3300033402|Ga0326728_10012272All Organisms → cellular organisms → Bacteria19111Open in IMG/M
3300033402|Ga0326728_10015698All Organisms → cellular organisms → Bacteria15677Open in IMG/M
3300033402|Ga0326728_10096929All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium3599Open in IMG/M
3300033402|Ga0326728_10377385Not Available1228Open in IMG/M
3300033405|Ga0326727_10012935All Organisms → cellular organisms → Bacteria18795Open in IMG/M
3300033405|Ga0326727_10037471All Organisms → cellular organisms → Bacteria8236Open in IMG/M
3300033433|Ga0326726_11477486All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes662Open in IMG/M
3300033513|Ga0316628_101248714Not Available989Open in IMG/M
3300033890|Ga0334810_170937All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300034125|Ga0370484_0226491Not Available515Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FenEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Fen10.37%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil8.15%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland6.67%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa6.67%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog5.93%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil5.19%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil5.19%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.44%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland3.70%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.22%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.22%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.22%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.96%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog2.96%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil2.96%
Thermal SpringsEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs1.48%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.48%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.48%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil1.48%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa1.48%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost1.48%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.48%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment0.74%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater0.74%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.74%
Freshwater Lake HypolimnionEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion0.74%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.74%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.74%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.74%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.74%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.74%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.74%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.74%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.74%
PeatEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat0.74%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.74%
WastewaterEngineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater0.74%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300002183Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22AEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005994Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049EnvironmentalOpen in IMG/M
3300006055Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012EnvironmentalOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009444Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3EnvironmentalOpen in IMG/M
3300009502Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaGEnvironmentalOpen in IMG/M
3300009552Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150EnvironmentalOpen in IMG/M
3300009630Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40EnvironmentalOpen in IMG/M
3300009637Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40EnvironmentalOpen in IMG/M
3300009639Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40EnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009868Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plantEngineeredOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300014155Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaGEnvironmentalOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014490Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaGEnvironmentalOpen in IMG/M
3300014491Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaGEnvironmentalOpen in IMG/M
3300014492Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaGEnvironmentalOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300014494Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaGEnvironmentalOpen in IMG/M
3300014496Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaGEnvironmentalOpen in IMG/M
3300014498Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaGEnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014502Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014839Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300017935Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40EnvironmentalOpen in IMG/M
3300017941Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150EnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300018017Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40EnvironmentalOpen in IMG/M
3300018021Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150EnvironmentalOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018024Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300019785Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020084Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200mEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021602Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5mEnvironmentalOpen in IMG/M
3300022524Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24EnvironmentalOpen in IMG/M
3300022555Alinen_combined assemblyEnvironmentalOpen in IMG/M
3300022563OV2_combined assemblyEnvironmentalOpen in IMG/M
3300023101Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14EnvironmentalOpen in IMG/M
3300025444Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025548Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)EnvironmentalOpen in IMG/M
3300025619Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025664Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025852Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027896Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028146Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300028866Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029889Peat microbial communities from Marcell Experimental Forest bog in Minnesota, USA - MG_T3F_30cmEnvironmentalOpen in IMG/M
3300029910III_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300029922III_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300029952II_Bog_N3 coassemblyEnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030518Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300032069Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20EnvironmentalOpen in IMG/M
3300032070Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300033890Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-MEnvironmentalOpen in IMG/M
3300034125Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12270J11330_1026702013300000567Peatlands SoilMSSKAQAVLREFNSLPPVEQMAVYEAIARKVTPADYGPLSDEDLTAIAAETFALLDEEEGRAQRTVGADVRRLTF*
JGI12270J11330_1026740313300000567Peatlands SoilLKLQFYRTSFNLQYMSNRALAVIEEFNSLPQVEQLAVYEAIARKVTPAEYGPLSDEDLTAIAAETFALLDQEESRAQSR*
JGIcombinedJ13530_10134293133300001213WetlandFQGMSTKAQAVLEGFRTLPREEQYAVYESIARSVVPGDYGPMSDDDLTAVAAQTFALLDEEESRAESR*
JGI24145J26757_1003353823300002183Arctic Peat SoilMSSKAQVVLDEFKRLPQGEQRAVYEAIAHTLAPADCGPLSDDELTALAAETFALLDEEESRAQSR*
Ga0070741_10001938403300005529Surface SoilMSSEAKAVIEEFNRLSRLDQLAVYEAIARKVTPADYGPLSDEDLTTIAAQTFALLDEEEDRARPR*
Ga0070735_1017445133300005534Surface SoilMSSEAQAVIEEFSRLPRTEQLAVYEAIARKVTPADYGPLSDEDLTAIAAETFALLDEEEGRARSR*
Ga0066708_1083121513300005576SoilMSTKAQAVLDTFKSLPRPEQLDVYEKIARSVVPADYGPLSDDDLTSIAAQTFGLLDEEESRAKPR*
Ga0066789_1043609613300005994SoilMSSEAKAVIEEFSRLPRFDQLAVYEAIARKVIPADYGPLSDENLTAIAAQTFALLDEEEDRARPR*
Ga0097691_104308333300006055Arctic Peat SoilMSTKAQTVLEGFRSLPRDEQYAVYETIARSVTPGDYGRLSDDDLTAIAAQTFSLLDEEESRAQSR*
Ga0075522_1047649723300006638Arctic Peat SoilMSSHAEAVIQEFNILPRMEQMAVYEAIARKVTAADYGPLSDEDLTAIAAETFGLLDKESSQQA*
Ga0066710_10430379913300009012Grasslands SoilMSAEAQAVLERFTKLPRAEQLSVYEAIARTVGPEDYGPLSDDELTAIAAQAFALLDEEEAGAQPR
Ga0114945_1002135943300009444Thermal SpringsMSTKAQALVDEFRNLPRQEQFEVYEAIARSVVPDDYGPLSDDELTAIAAQSFARLDEEESRAQAG*
Ga0114951_1033282413300009502FreshwaterVLEGFRSLPRDEQYAVYETIARSVTPGDYGPLSDDDLTTIAAQTFSLLDEEESHAQSR*
Ga0116138_100444813300009552PeatlandMSADAQAVLEKFIKLPRAEQLSVYEAIARTVGPQDYGPLSDNELTAIAAQTFALLDEEETRAHTR*
Ga0116114_115031423300009630PeatlandMSNRALAVIQEFNSLPQVEQLAVYEAIARKVTPVDYGPLSDEDLTAIAAETFALLDEEESRAQSR*
Ga0116118_125621623300009637PeatlandMSFNLLFMSSKAQAVIEEFNRLPQSEQLAVYEAIARKVTPASYGPLSDEDLTAIAAETFALLDEEESRAQSR*
Ga0116122_108341423300009639PeatlandMRVSFQGMSTKAQAVLEGFRSLPRDEQYTVYEMIARSVVPGDYGPLSDDDLTVIAAQTFSLLDEEESRAQSR*
Ga0116217_1014816133300009700Peatlands SoilSMSSKAQAVLREFNSLPPVEQMAVYEAIARKVTPADYGPLSDEDLTAIAAETFALLDEEEGRAQRTVGADVRRLTF*
Ga0130016_1001121963300009868WastewaterMSTKAQAVLEGFKSLPRDEQYVVYETIARTVVPGDYGPLSDDELTDIAAQTFSLLDEEESRAQSG*
Ga0074045_1027230623300010341Bog Forest SoilMSTKAQAVLEGFRSLPRDEQYAVYETIARSVVPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR*
Ga0074044_1038930633300010343Bog Forest SoilMSSKAQSVIQEFNNLPQVEQLAVYEAIARKVTPADYGPLSDEDLTAIAAKTFALLDQEEI
Ga0136449_10056740033300010379Peatlands SoilMEEFNRLPQVEQLAVSEPIARKVTPADYGPLSDEDLTAIAAETFALLDEEESRARSR*
Ga0136449_10230124933300010379Peatlands SoilLEGFRSLPRDEQYVVYETIARAVAPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR*
Ga0137391_1143669013300011270Vadose Zone SoilMSTKAQAVLAEFLNLPRDEQFAVFEAIAHTVTPADYGPLTDEELTAIAAESLAEQRIE
Ga0137378_1141400223300012210Vadose Zone SoilRGGLRFSSNVGKFRSMSTKAQAVLDRFQSLPRDEQLDVYEKIARCLIPEDYGPLSDDDLTGIAAQTFALLDEEESRAKSR*
Ga0137360_1066247323300012361Vadose Zone SoilMSTKAEAIIEQFKSLPKAEQWGVYEAIARSVVPQDYSELSDDELTAIAAQTFALLDEEDERAKSR*
Ga0137361_1011560623300012362Vadose Zone SoilVSTKAQAVVESFYSLPKPEQLVVYVAIARTVVPGNYRPLSDEDLTAIAAETFSSLDEEEQGSKPR*
Ga0137359_1054942623300012923Vadose Zone SoilVSTKAQAVVESFYSLPKPEQLAVYEAIARTLVPGNYGPLSDEDLTAIAAETFSSLDEEEQGAKPR*
Ga0181524_1044994713300014155BogMSSKAQAVIEEFNSLPPLEQLAVYEAIARKVTPANYGPLSDEDLTAIAAETFALL
Ga0181524_1050157313300014155BogTSFNLQYMSSKAQSVIQEFNRLPQLEQLAVYEAIARKVTPADYGPLTDEELTAIAAESFALLDREESRAQSR*
Ga0181521_1001242313300014158BogMSSKAQSVIHEFNSLPQVEQLAVFEAIARKVTPADYGPLSDEDLTAIAAETFA
Ga0181517_1001809153300014160BogMSSKAQAVIQEFNRLPQIDQLAVYEAIARKVTPADYEPLSDEDLTAIAAETFALLDQEESRAQSR*
Ga0182018_1021123243300014489PalsaMSSKAQAVIEEFNSLPQAEQLAVYEAIARKVIPENYGPLSDEDLTSIAAETFALLDEEESRARSR*
Ga0182018_1057828013300014489PalsaIEEFNSLPQVEQLAVYEAIARKVIPTNYGPLSDEDLTSIAAETFALLDEEEKRAESR*
Ga0182010_1041468923300014490FenMRVSFQGMSTKAQAVLEGFRSLPRDEQYTVYEMIARSVVPGDYGPLSDDDLTVIAAQ
Ga0182014_1001289073300014491BogMSTKAEAVLEGFRSLPRDEQYAVYETIARSVVPGDYGALSDDDLTAIAAQTFSLLDEEESRAQSR*
Ga0182014_1005648623300014491BogMSTKAQTVLEGFRSLPRDEQYTVYEMIARSVVPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR*
Ga0182013_1004273413300014492BogMSDKAQAVIQEFNSLPQAEQLAVYEAIARKVVPANYGPLSDEDLTAIAAETFGFLDGEESRAQTR*
Ga0182016_1054537213300014493BogHRRPFNLYLMSDKAQAVIQEFNSLPQAEQLAVYEAIARKVVPANYGPLSDEDLTAIAAETFGFLDGEESRAQTR*
Ga0182017_1018989423300014494FenMSTKAQAVLEGFRTLPREEQYAVYETIARSVVPGDYGPLSDDDLTAVAGQTFALLDEEESRAQSR*
Ga0182011_1021195223300014496FenMSNRALAVIEEFNSLPQVEQLAVYEAIARKVTPADYGPLSDEDLTAIAAETFALLDEEED
Ga0182019_1002092663300014498FenMSKKAQAVLEEFKSLPRDEQYAVYETIARTVVPGDYGPLSDGDLTATAAQTFSLLDEEESRAQSR*
Ga0182019_1005250533300014498FenLDDFKELPREAQWNVYEAIARSVVPEDYGPLSDGDLTAIAARSFAQLDEEEAGAEAR*
Ga0182019_1015865823300014498FenMSTKAQAVLEGFRTLPREEQYAVYETIARSVVPGDCGPLSDDDLTAVAGQTFALLDEEESRAQSR*
Ga0182024_1009419243300014501PermafrostMSSKAQAVIQDFNSLPQVEQLAVYEAIARKVIPADYGPLSDEDLTAIAAESFALLDEEERRAGSR*
Ga0182024_1078311423300014501PermafrostMGFGLQFRQTSFNLQSMSNRALAFIQEFNSLPQVEQLAVYEAIARKVTPTEYGPLSDEDLTSIAAESFELLDQEESRAQSR*
Ga0182021_1062223123300014502FenMSTKAQAVLEEFKSLPREEQYAVYETIARTVVPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR*
Ga0182021_1244764913300014502FenMSTKAQTVLAGFRSLPRDEQYAVYETIARSVTPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR*
Ga0182027_10001059303300014839FenMSNKAQAVIQQFNSLPQVEQLAVYEAIARKVTPADYGPLSDEDLTAIAAESFALLDQEESRAQSR*
Ga0182027_10003664193300014839FenMSNRAEAVVREFNSLPHVEQLAVYEAIARTVAPADYGPLSDEDLTAIAAESFALLDEEHSRAQSR*
Ga0182027_10006406193300014839FenMSSKAQAVIQEFNRLPQVEQLAVYEAIARKVTPVDYGPLSDEDLTSIAAETFALLDQEESGAQSR*
Ga0182027_1028000013300014839FenMSTQAQAVLEGFKKLPRAEQYAVYETIARAVAPGDYGPLSDDDLTAIATQTFSLLDEEEACAQSR*
Ga0182027_1029141423300014839FenMSTKAQAVLEGFRSLPCDEQYAVYEMIARSVIPGDYGALSDDDLTAIAAQTFSLLDEEESRAQPR*
Ga0187848_1003595823300017935PeatlandMSSKAQAVIEEFNRLPQSEQLAVYEAIARKVTPASYGPLSDEDLTAIAAETFALLDEEESRAQSR
Ga0187848_1007655223300017935PeatlandMRVSFQGMSTKAQAVLEGFRSLPRDEQYTVYEMIARSVVPGDYGPLSDDDLTVIAAQTFSLLDEEESRAQSR
Ga0187850_1000114413300017941PeatlandMMPQSMFTCMSADAQAVLEKFIKLPRAEQLSVYEAIARTVGPQDYGPLSDNELTAIAAQTFALLDEEETRAHTR
Ga0181520_1016123413300017988BogFNSLPRIEQLAVYQVIARKVTPADYGPLSDEDLTAIAAETFALLDEEESRAQSR
Ga0181520_1023763843300017988BogMSSEAQTVIAEFNNLPPDEQLAVYEVIARKVTPADYGPLSDEDLTAIAAESFALLDQEESRAQSR
Ga0181520_1074341933300017988BogEFNSLPQAEQMAVYEVIAHKVTPAENGPLSDEDLTAIAAETFGMLDQEERRAESR
Ga0181520_1094874523300017988BogMSNRALAVIQEFSSLPQAEQLAVYEAIARKVTPADYGPLSDEDLTAIAAESFALLDQEESRAQSR
Ga0187872_1002908353300018017PeatlandMSSKAQAVIEEFNRLPQSEQLAVYEAIARKVTPASYGPLSDEDLTAIAAETFALLDEEESRAQLR
Ga0187882_113695413300018021PeatlandAVIQEFNSLPQVEQLAVYEAIARKVTPADYGPLSDEDLTSIAAETFALLDQEEKRAQSR
Ga0187882_132258813300018021PeatlandVLEGFRSLPRDEQYTVYEMIARSVVPGDYGPLSDDDLTVIAAQTFSLLDEEESRAQSR
Ga0187889_1019234223300018023PeatlandMRVTFQGMSTKAQAVLEGFRSLPRDEQYTVYEMIARSVVPGDYGPLSDDDLTVIAAQTFSLLDEEESRAQSR
Ga0187881_1036070823300018024PeatlandCPFHAMRVSFQGMSTKAQAVLEGFRSLPRDEQYTVYEMIARSVVPGDYGPLSDDDLTVIAAQTFSLLDEEESRAQSR
Ga0187855_1075468913300018038PeatlandMSNRAEAVVKEFNSLPQVEQLAVYEAIARTVAPAGYGPLSEEELTAIAAESFALLDE
Ga0187771_1117654823300018088Tropical PeatlandMSTKAQAVLEGFRSLPRDEQYAVYETIARSVVPGDYGALSDDDLTAIAAQTFSLLDEEESRAQSR
Ga0182022_114400923300019785FenMRSKAQAVLEGFRTLPREEQYAVYETIARSLVPGHCGPLSDEDLTVVAAQTFALLDEDESRAQSW
Ga0194110_1004071433300020084Freshwater LakeMSTKAEAVLEQFKSLRRAEQLAVYEVIARSVVPEDYGPLSDDDLTAIAAETFGLLDEEDLLFS
Ga0210405_1010835123300021171SoilMSSEAKAVIEEFIRLPRHDQLAVYEAIARKVTSADYGPLSDDDLTAIAAESFALLDEEENRAKSR
Ga0210387_1068326123300021405SoilMSSDAKAVIEEFSRLPRPDQLAVYEAIARKVTPADYGPLSDEDLTAIAAQSFALLDEEEDRARPR
Ga0194060_1002205943300021602Anoxic Zone FreshwaterVLEGFRSLPRDEQYAVYETIARSVTPGDYGPLSDDDLTTIAAQTFSLLDEEESHAQSR
Ga0224534_100808723300022524SoilMSTKAQTVLEGFRSLPRDEQYTVYEMIARSVVPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR
Ga0212088_10001546243300022555Freshwater Lake HypolimnionMSTKAQAVLEGFRSLPRDEQYTVYEMIARFVVPGDYSPLSDDDLTVIAAQTFSLLDEEESRAQSR
Ga0212128_1006428343300022563Thermal SpringsMSTKAQALVDEFRNLPRQEQFEVYEAIARSVVPDDYGPLSDDELTAIAAQSFARLDEEESRAQAG
Ga0224557_118515113300023101SoilMSSKAQAVIQEFNRLPQVEQLAVYEAIARKVTPVDYGPLSDEDLTSIAAETFALLDQEESGAQSR
Ga0224557_130637913300023101SoilMSNRAEAVVREFNSLPHVEQLAVYEAIARTVAPAGYGPLSDEDLTAIAAESFALLDEEERRAQS
Ga0208189_102132423300025444PeatlandMSSKAQSVIQEFNRLPQLEQLAVYEAIARKVTPADYGPLTDEELTAIAAESFALLDREESRAQSR
Ga0208716_105894423300025548Arctic Peat SoilMSSKAQVVLDEFKRLPQGEQRAVYEAIAHTLAPADCGPLSDDELTALAAETFALLDEEEPRAQSR
Ga0207926_113818713300025619Arctic Peat SoilMSTKAQTVLEGFRSLPRDEQYAVYETIARSVTPGDYGPLSDDDLTAIAAETFSFLDEEESRAQSR
Ga0208849_113472023300025664Arctic Peat SoilMSNEAQAVIHEFNSLPQDEQLAVYEAIARKVIPADYGSLSDDDLTAIAAESFALLDQEESRAQSR
Ga0209124_1010715323300025852Arctic Peat SoilMSSKAQVVLDEFKRLPQGEQRAVYEAIAHTLAPADCGPLSDDELTALAAETFALLDEEESRAQSR
Ga0209517_1001123163300027854Peatlands SoilMSSKAQAVLREFNSLPPVEQMAVYEAIARKVTPADYGPLSDEDLTAIAAETFALLDEEEGRAQRTVGADVRRLTF
Ga0209517_1012661023300027854Peatlands SoilMSNRALAVIEEFNSLPQVEQLAVYEAIARKVTPAEYGPLSDEDLTAIAAETFALLDQEESRAQSR
Ga0209777_1061183223300027896Freshwater Lake SedimentMSTKAQAVLEGFRTLPREEQYAVYETIARAVVPGDCGPLSDDDLTAVAAQTFALLDEEESRAQPR
Ga0209488_1037642533300027903Vadose Zone SoilMSTKAHAVLTGFQSLPRDEQLVVYEKIARCVVPEDSGPLSDDDLPGIAAQTFALLDEE
Ga0209415_1060386023300027905Peatlands SoilMSTKAQAVLEGFKSLPRDEQYAVYETIARSVVPGDYGPLSDDDLTAIAAQTFSLLNEEESRAQPR
Ga0209415_1107535723300027905Peatlands SoilSMSSKALAVMEEFNRLPQVEQLAVSEPIARKVTPADYGPLSDEDLTAIAAETFALLDEEESRARSR
Ga0209006_1007284533300027908Forest SoilVSSEAKAVIDEFGRLSRLDQLAVYEAIARKVTPADYGPLSDDDLTAIAAESFALLDEEENRAKPR
Ga0247682_100911733300028146SoilMSSEAKAVIDEFSRLPPRDQLAVYEAIARKVTPADYGTLSDDDLTAIAAESFALLDEEENRAKPR
Ga0265338_1050211733300028800RhizosphereLDEFKSLPRGEQLAVYQAIAHAFVPEDYGLLSDEALTALAAETFTLLDEEESRAQSR
Ga0265338_1079600013300028800RhizosphereLSNCRGFHSLQSPLNSFNPQIVSSEAKAVIEEFSRLPRLDQLAVYEAIARKVTPADYGPLSDEDLTVIAAQTFELLDEEE
Ga0302278_1009580513300028866BogVLTVSRAAQAIIQDFNRLPPGEQMAVYEAIARQVTPLDHGPLSDEDLTAIAAESFAMLDEEEKHGQSR
Ga0311368_1090484023300029882PalsaMSRSSHAIIQEFNSLPPVEQLAVYEAIARKVTPAQYEPLSDEDLTVIAAESFAMLDEEESRALSR
Ga0246001_102067223300029889PeatMSFNLLFMSSKAQAVIEEFNRLPQSEQLAVYEAIARKVTPASYGPLSDEDLTAIAAETFALLDEEESRAQSR
Ga0311369_1111614723300029910PalsaMSRSSHAIIQEFNSLPPVEQLAVYEAIARKVTPAQYEPLSDEDLTVIAAESFAM
Ga0311363_1009886813300029922FenVAYLSSAAQAIIQDFNRLPPVEQLAVYEAIARKVTPLGYGPLSDDDLTAIAAESFALLDEEEKTAESR
Ga0311346_1005969653300029952BogVAYLSSAAQAIIQDFNRLPPVEQLAVYEAIAGKVTPLGYGPLSDDDLTAIAAESFALLDEEEKTAESR
Ga0311346_1116675123300029952BogMSDKAQAVIQEFNSLPQAEQLAVYEAIARKVVPANYGPLSDEDLTAIAAETFGFLDGEESRAQTR
Ga0311353_10010236123300030399PalsaMSNRALTVIEEFNNLRKAEQIAVYEAIGRHVAPADYAPFSNDDLTAIAAERLALADPDGPKNL
Ga0311353_1086627213300030399PalsaMSNEAKAVIQEFNSLPQAEQLAVYEAIARKVIPADYGPLSDEDLTAIAAESFALLDQEESRAQSR
Ga0311370_1017398133300030503PalsaMSRSSHAIIQEFNSLPPVEQLAVYEAIARKVTPAQYEPLSDEDLTVIAAETFALLDEEESRAQSR
Ga0302275_1004689863300030518BogVLTVSRAAQAIIQDFNRLPPGEQMAVTPLDHGPLSDEDLTAIAAESFAMLDEEEKHGQSR
Ga0302275_1055953213300030518BogMSSAAQAIIQDFNRLPPVEQLAVYEAIAGKVTPLGYGPLSDDDLTAIAAESFALLDEEEKTAESR
Ga0170834_11190884313300031057Forest SoilKTFPSLRFPSQELCFRRMSSKAQAILDEFRSLSRDEQFAVYETIARAVVPDDYGQLSDDDLTSIAAQTFSLLDEEESRAEQR
Ga0170823_1708073013300031128Forest SoilQAILDEFRSLSRDEQFAVYETIARAVVPDDYGQLSDDDLTSIAAQTFSLLDEEESRAEQR
Ga0170824_10916220913300031231Forest SoilRMSNKAQAILDEFRSLSRDEQFAVYETIARTVVSAGYGQLSDGDLTNIAAQTFSLLDEEESRAEQR
Ga0302325_1256075123300031234PalsaMSNESQAVIHEFNSLPQAEQVAVYEAIARQVIPADYGPLSDEDLTAIAAASFALLDQEESRAQSR
Ga0302324_10267405033300031236PalsaNEAQAVIQEFNSLPQAEQLVVYEAIARKVIPADYGPLSDEDLTAIAAETFALLDQEESRAQSR
Ga0302324_10324732623300031236PalsaMSNEAQAVIQQFDSLPQAEQLVVYEAIARKVIPADYGRLSDADLTAIAAESFALLDQEESRAQSR
Ga0302326_1254296213300031525PalsaHEFNSLPQVEQLAVYEAIARKVTPADYGPLSDEELTAIAAESFALLDREESRAQSR
Ga0310686_10902345533300031708SoilMSSEAEAVIHEFNSLPQTEQLAVYEAIARKVTPTDYGPLSDEDLTAIAAETFALLDEEERRAQSR
Ga0310686_11023295823300031708SoilVSNEAQAVIQEFNRLPQAEQLAVYEAIARKVIPADYGPLSDEDLTAIAAESFALLDQEESRAQSR
Ga0310686_11771730723300031708SoilMSNKAEAVIQDFNSLPQVEQWAVYEAIARKVVPSDYGPLSDEDLTAIAADTFALLDEEESRAQPR
Ga0307474_1141818923300031718Hardwood Forest SoilMSNKALAVIQEFNSLPQAEQMAVYEAIARKVTPADYGPLSDEDLTAIAAETLALLDQEESRAQSR
Ga0307477_1019495913300031753Hardwood Forest SoilMSSKAQAVLEQFNSLPQVEQLAVYEAITRKVTPADYGPLSDEDLTAIAAETFAL
Ga0315282_1002756343300032069SedimentMSAGAQAVLEQFIKLPRAEQLSVYEAIARAVGPQDYGPLSDDELTAIAAQTFALLDEEETRAHPR
Ga0315279_1003668413300032070SedimentMSADAQAVLEQFIKLPRAEQLSVYEAIARAGGPQDYGPLSDDELTAIAAQTFALLDE
Ga0311301_1026586913300032160Peatlands SoilMSDKAQAVIEEFNRLPHVEQLAVYEAIARKVTPADYGPLSDEDLTAIAAETFALLD
Ga0311301_1067110733300032160Peatlands SoilMSSKALAVMEEFNRLPQVEQLAVSEPIARKVTPADYGPLSDEDLTAIAAETFALLDEEESRARSR
Ga0315271_1155100623300032256SedimentMSTKAQAVLEGFRSLPRDEQYVVYETIARCVAPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR
Ga0315287_1174021223300032397SedimentVSTKAQAVLDDFKGLPREEQWSVYEAIARSVVPEDYGSLSDDDLTAIAAQTFALLDEEEARAASR
Ga0348332_1399475923300032515Plant LitterMSKQAEAVIQNFNGLSQVEPLAVYEAIARKVTPADYGLLSDEDLTAIAAETFELLDQEESRALSR
Ga0335069_1053034923300032893SoilMSTKAQAVLEGFKSLPRDEQYAVYETIARSVVPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQPR
Ga0335084_1078039633300033004SoilMSTKAQAVLEGFRSLPRDEQYAVYEMIARSVTPGDYGPLSDDDLTAIAAQTFS
Ga0326728_1001227263300033402Peat SoilMSSKAEVMVQEFNRLPKVEPLAVYEAIARKVTPADYGPLSDEDLTAIAAETFALLDQEESRAQSR
Ga0326728_10015698133300033402Peat SoilMSNRALAVIQEFNSLPQVEQLAVYEAIARKVTPVDYGPLSDEDLTAIAAETFALLDEEESRAQPR
Ga0326728_1009692923300033402Peat SoilMAVQPMFRPMSTDAHALLEKFITLPRAEQLSVYEAIARTVGPVDYGPLSDDELTAIAAQTFALLDEEDTRAQSR
Ga0326728_1037738543300033402Peat SoilSLQSCGMSFNLLSMSSKAQAVIEEFNRLPQSEQLAVYEAIARKVTPASYGPLSDEDLTAIAAETFALLDEEESRARSR
Ga0326727_10012935133300033405Peat SoilMSSKAQAVIEEFNRLPQSEQLAVYEAIARKVTPASYGPLSDEDLTAIAAETFALLDEEESRARSR
Ga0326727_1003747113300033405Peat SoilMSSKAEVMVQEFNRLPKVEPLAVYEAIARKVTPADYGPLSDEDLTAIAAETFALLDQE
Ga0326726_1147748623300033433Peat SoilMRVSFQGMSTKAQAVLEGFRSLPRDEQYAVYETIARSVTPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR
Ga0316628_10124871413300033513SoilGMSTKAQAVLEGFRSLPRDEQYTVYEMIARSMAPGDYGPLSDDDLTAIAAQTFSLLDEEESRAQSR
Ga0334810_170937_10_1863300033890SoilVLEGFRSLPRDEQYAVYETIARSVTPGDYGPLSDDDLTVIAAQTFSLLDEEESRAQSR
Ga0370484_0226491_103_3003300034125Untreated Peat SoilMSTKAQTVLEGFRSLPRDEQYAVYETIARSVTPGDYGRLSDDDLTAIAAQTFSLLDEEESRAQSR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.