Metagenome Family F055245

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055245
Family Type	Metagenome
Number of Sequences	139
Average Sequence Length	102 residues
Representative Sequence	MGMTVEEYREGFRNHTLAFCMPAAHAEFSSHFLDEFSERILKKDWRDVSAASFSRIPSLLSGEESEDEVAAEIQEAYGVDVSDLPGLPFWEVVRRCAR
Number of Associated Samples	98
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	35.04 %
% of genes near scaffold ends (potentially truncated)	43.17 %
% of genes from short scaffolds (< 2000 bps)	87.77 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.237 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.827 % of family members)
Environment Ontology (ENVO)	Unclassified (55.396 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (71.942 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.68% β-sheet: 0.00% Coil/Unstructured: 60.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF08327	AHSA1	9.35
PF14310	Fn3-like	5.04
PF04397	LytTR	4.32
PF11188	DUF2975	2.88
PF03795	YCII	2.16
PF00939	Na_sulph_symp	2.16
PF01904	DUF72	2.16
PF13443	HTH_26	2.16
PF07859	Abhydrolase_3	1.44
PF01212	Beta_elim_lyase	1.44
PF04055	Radical_SAM	0.72
PF00486	Trans_reg_C	0.72
PF05199	GMC_oxred_C	0.72
PF13431	TPR_17	0.72
PF04616	Glyco_hydro_43	0.72
PF03600	CitMHS	0.72
PF06580	His_kinase	0.72
PF01757	Acyl_transf_3	0.72
PF02016	Peptidase_S66	0.72
PF00679	EFG_C	0.72
PF13684	Dak1_2	0.72
PF04237	YjbR	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG1167	DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain	Transcription [K]	2.88
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	2.16
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	2.16
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	2.16
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	2.16
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	1.44
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	1.44
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	1.44
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	1.44
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	1.44
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	1.44
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	1.44
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	1.44
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	1.44
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	1.44
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	1.44
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	1.44
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	1.44
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	1.44
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	1.44
COG3033	Tryptophanase	Amino acid transport and metabolism [E]	1.44
COG4992	Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase	Amino acid transport and metabolism [E]	1.44
COG1619	Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling)	Cell wall/membrane/envelope biogenesis [M]	0.72
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.72
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.72
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.72
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
All Organisms	root	All Organisms	46.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
cellular organisms	root	All Organisms → cellular organisms	46.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8.63 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.16 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.44 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	5.76 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.44 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.44 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	5.76 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.72 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.72 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.72 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.72 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	5.76 %
Nitrospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum	0.72 %
Azohydromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas	0.72 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.72 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.72 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	5.76 %
Acidovorax carolinensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → Acidovorax carolinensis	0.72 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.72 %
Nitrospirillum amazonense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense	0.72 %
Azohydromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas	0.72 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.24 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	5.76 %
Nitrospirillum amazonense Y2	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense → Nitrospirillum amazonense Y2	0.72 %
Acidovorax carolinensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → Acidovorax carolinensis	0.72 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.72 %
Azohydromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas	0.72 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2189375	Not Available	876	Open in IMG/M
3300000956\|JGI10216J12902_110469399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1291	Open in IMG/M
3300003267\|soilL1_10046612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	2908	Open in IMG/M
3300005328\|Ga0070676_11259974	Not Available	563	Open in IMG/M
3300005331\|Ga0070670_100124966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	2220	Open in IMG/M
3300005331\|Ga0070670_100422385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense → Nitrospirillum amazonense Y2	1179	Open in IMG/M
3300005331\|Ga0070670_100936616	Not Available	786	Open in IMG/M
3300005333\|Ga0070677_10093652	Not Available	1311	Open in IMG/M
3300005333\|Ga0070677_10252942	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300005334\|Ga0068869_100096706	All Organisms → cellular organisms → Bacteria	2229	Open in IMG/M
3300005334\|Ga0068869_100563229	Not Available	959	Open in IMG/M
3300005337\|Ga0070682_101116245	Not Available	661	Open in IMG/M
3300005337\|Ga0070682_101743518	Not Available	542	Open in IMG/M
3300005338\|Ga0068868_101475897	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300005338\|Ga0068868_102167333	Not Available	529	Open in IMG/M
3300005339\|Ga0070660_100714848	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300005340\|Ga0070689_100101851	All Organisms → cellular organisms → Bacteria	2274	Open in IMG/M
3300005344\|Ga0070661_101873942	Not Available	509	Open in IMG/M
3300005345\|Ga0070692_11312368	Not Available	519	Open in IMG/M
3300005355\|Ga0070671_100296045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1377	Open in IMG/M
3300005355\|Ga0070671_100310601	All Organisms → cellular organisms → Bacteria → Proteobacteria	1343	Open in IMG/M
3300005355\|Ga0070671_101372651	Not Available	624	Open in IMG/M
3300005356\|Ga0070674_101242420	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300005364\|Ga0070673_100572569	Not Available	1028	Open in IMG/M
3300005364\|Ga0070673_100706120	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300005441\|Ga0070700_100713959	Not Available	798	Open in IMG/M
3300005441\|Ga0070700_101132516	Not Available	650	Open in IMG/M
3300005455\|Ga0070663_100683151	Not Available	871	Open in IMG/M
3300005455\|Ga0070663_101925315	Not Available	531	Open in IMG/M
3300005456\|Ga0070678_100022968	All Organisms → cellular organisms → Bacteria → Proteobacteria	4147	Open in IMG/M
3300005456\|Ga0070678_102349605	Not Available	506	Open in IMG/M
3300005459\|Ga0068867_101237970	Not Available	687	Open in IMG/M
3300005543\|Ga0070672_100290282	Not Available	1384	Open in IMG/M
3300005547\|Ga0070693_100607083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	791	Open in IMG/M
3300005548\|Ga0070665_100966209	Not Available	864	Open in IMG/M
3300005548\|Ga0070665_100991939	Not Available	852	Open in IMG/M
3300005548\|Ga0070665_102627128	Not Available	504	Open in IMG/M
3300005564\|Ga0070664_100042240	All Organisms → cellular organisms → Bacteria	3849	Open in IMG/M
3300005564\|Ga0070664_100090872	All Organisms → cellular organisms → Bacteria → Proteobacteria	2642	Open in IMG/M
3300005564\|Ga0070664_100914634	Not Available	823	Open in IMG/M
3300005564\|Ga0070664_102129320	Not Available	532	Open in IMG/M
3300005617\|Ga0068859_102168913	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005843\|Ga0068860_100952812	All Organisms → cellular organisms → Bacteria → Proteobacteria	875	Open in IMG/M
3300005844\|Ga0068862_100782111	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300006163\|Ga0070715_10120734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1249	Open in IMG/M
3300006358\|Ga0068871_100235867	All Organisms → cellular organisms → Bacteria → Proteobacteria	1589	Open in IMG/M
3300006358\|Ga0068871_101044719	Not Available	762	Open in IMG/M
3300006755\|Ga0079222_10307603	Not Available	1040	Open in IMG/M
3300006755\|Ga0079222_10383647	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300006806\|Ga0079220_11232572	Not Available	620	Open in IMG/M
3300006918\|Ga0079216_10009892	All Organisms → cellular organisms → Bacteria	3212	Open in IMG/M
3300007004\|Ga0079218_12723999	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300009093\|Ga0105240_11660549	Not Available	668	Open in IMG/M
3300009156\|Ga0111538_10420150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1694	Open in IMG/M
3300009156\|Ga0111538_11634078	All Organisms → cellular organisms → Bacteria → Terrabacteria group	812	Open in IMG/M
3300009176\|Ga0105242_10379176	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300009448\|Ga0114940_10018230	All Organisms → cellular organisms → Bacteria	2991	Open in IMG/M
3300009551\|Ga0105238_10677145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1043	Open in IMG/M
3300009551\|Ga0105238_11168923	Not Available	793	Open in IMG/M
3300010401\|Ga0134121_10727031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	945	Open in IMG/M
3300010401\|Ga0134121_11417298	Not Available	706	Open in IMG/M
3300012212\|Ga0150985_101038661	Not Available	1092	Open in IMG/M
3300012212\|Ga0150985_122087690	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300012212\|Ga0150985_122661744	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300012469\|Ga0150984_108997719	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300012469\|Ga0150984_119070159	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300012892\|Ga0157294_10040911	Not Available	1014	Open in IMG/M
3300012895\|Ga0157309_10192997	Not Available	633	Open in IMG/M
3300012902\|Ga0157291_10235820	Not Available	600	Open in IMG/M
3300012903\|Ga0157289_10098009	Not Available	834	Open in IMG/M
3300012904\|Ga0157282_10133501	Not Available	737	Open in IMG/M
3300012916\|Ga0157310_10382369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	579	Open in IMG/M
3300012916\|Ga0157310_10524951	Not Available	520	Open in IMG/M
3300012916\|Ga0157310_10578877	Not Available	503	Open in IMG/M
3300012943\|Ga0164241_10607679	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300013308\|Ga0157375_10895357	All Organisms → cellular organisms → Bacteria → Proteobacteria	1032	Open in IMG/M
3300013308\|Ga0157375_13522039	Not Available	521	Open in IMG/M
3300014166\|Ga0134079_10495116	Not Available	589	Open in IMG/M
3300014326\|Ga0157380_10237974	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300014969\|Ga0157376_11461145	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300015200\|Ga0173480_10331514	Not Available	861	Open in IMG/M
3300015371\|Ga0132258_13293813	Not Available	1112	Open in IMG/M
3300018429\|Ga0190272_13027122	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300018432\|Ga0190275_10101759	All Organisms → cellular organisms → Bacteria	2548	Open in IMG/M
3300018476\|Ga0190274_12063748	Not Available	667	Open in IMG/M
3300018476\|Ga0190274_13013593	Not Available	566	Open in IMG/M
3300019361\|Ga0173482_10141965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	925	Open in IMG/M
3300019361\|Ga0173482_10174268	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300019361\|Ga0173482_10395795	Not Available	640	Open in IMG/M
3300019361\|Ga0173482_10468164	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300022549\|Ga0212091_10093069	Not Available	1151	Open in IMG/M
3300022886\|Ga0247746_1073557	Not Available	811	Open in IMG/M
3300024055\|Ga0247794_10024321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1527	Open in IMG/M
3300025893\|Ga0207682_10017580	All Organisms → cellular organisms → Bacteria	2793	Open in IMG/M
3300025893\|Ga0207682_10415956	Not Available	636	Open in IMG/M
3300025898\|Ga0207692_10775719	Not Available	626	Open in IMG/M
3300025901\|Ga0207688_10592840	Not Available	698	Open in IMG/M
3300025901\|Ga0207688_10799989	Not Available	597	Open in IMG/M
3300025905\|Ga0207685_10578513	Not Available	600	Open in IMG/M
3300025907\|Ga0207645_10147684	Not Available	1533	Open in IMG/M
3300025908\|Ga0207643_10512019	Not Available	768	Open in IMG/M
3300025916\|Ga0207663_10383214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1071	Open in IMG/M
3300025918\|Ga0207662_10078770	All Organisms → cellular organisms → Bacteria	2006	Open in IMG/M
3300025923\|Ga0207681_10617976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	897	Open in IMG/M
3300025925\|Ga0207650_10472186	Not Available	1046	Open in IMG/M
3300025925\|Ga0207650_10677467	Not Available	870	Open in IMG/M
3300025925\|Ga0207650_11280411	Not Available	624	Open in IMG/M
3300025926\|Ga0207659_10195701	All Organisms → cellular organisms → Bacteria → Proteobacteria	1611	Open in IMG/M
3300025926\|Ga0207659_10955633	Not Available	737	Open in IMG/M
3300025930\|Ga0207701_10232258	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300025931\|Ga0207644_11280303	Not Available	616	Open in IMG/M
3300025931\|Ga0207644_11641160	Not Available	539	Open in IMG/M
3300025937\|Ga0207669_10448794	Not Available	1021	Open in IMG/M
3300025942\|Ga0207689_11100093	Not Available	670	Open in IMG/M
3300025945\|Ga0207679_10110121	Not Available	2172	Open in IMG/M
3300025945\|Ga0207679_11710726	Not Available	575	Open in IMG/M
3300025960\|Ga0207651_10225891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	1517	Open in IMG/M
3300025960\|Ga0207651_11380222	Not Available	634	Open in IMG/M
3300026023\|Ga0207677_11653559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax → Acidovorax carolinensis	593	Open in IMG/M
3300026035\|Ga0207703_11758974	Not Available	596	Open in IMG/M
3300026067\|Ga0207678_10390172	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300026075\|Ga0207708_10309117	All Organisms → cellular organisms → Bacteria → Proteobacteria	1287	Open in IMG/M
3300026075\|Ga0207708_10884901	Not Available	772	Open in IMG/M
3300026089\|Ga0207648_10441081	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300026116\|Ga0207674_10238723	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300026118\|Ga0207675_101615998	Not Available	668	Open in IMG/M
3300026121\|Ga0207683_12009605	Not Available	526	Open in IMG/M
3300028293\|Ga0247662_1093329	Not Available	546	Open in IMG/M
3300028380\|Ga0268265_12186032	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300031548\|Ga0307408_100058626	All Organisms → cellular organisms → Bacteria	2800	Open in IMG/M
3300031716\|Ga0310813_10422043	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300031731\|Ga0307405_10192793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Azohydromonas	1473	Open in IMG/M
3300031901\|Ga0307406_11868197	Not Available	535	Open in IMG/M
3300031944\|Ga0310884_10653317	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300032003\|Ga0310897_10154180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	968	Open in IMG/M
3300032144\|Ga0315910_11400473	Not Available	545	Open in IMG/M
3300032157\|Ga0315912_10015279	All Organisms → cellular organisms → Bacteria → Proteobacteria	6391	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	60.43%
Environmental	Environmental	39.57%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	60.43%
Terrestrial	Environmental → Terrestrial	38.13%
Aquatic	Environmental → Aquatic	1.44%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	40.29%
Soil	Environmental → Terrestrial → Soil	38.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.70%
Freshwater	Environmental → Aquatic → Freshwater	1.44%
Roots	Host-Associated → Plants → Roots	1.44%

Habitat	Taxonomy	Distribution
Soil	Host-Associated → Plants → Rhizosphere → Soil	30.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.06%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.67%
Loam	Environmental → Terrestrial → Soil → Loam	10.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.88%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.16%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.44%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.44%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	30.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.35%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.16%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.44%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.44%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	13.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	7.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.60%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.16%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.44%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.44%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.44%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.44%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.44%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.72%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009448	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Cold Creek Source	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300022549	Cold Creek_combined assembly	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028293	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK03	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_21893751	3300000033	Soil	MGMTVEEYREGFRNHTLAFCMPAAHAEFSSHFLDEFSERILKKDWRDVSAASFSRIPSLLSGEESEDEVAAEIQEAYGVDVSDLPGLPFWEVV
JGI10216J12902_1104693992	3300000956	Soil	MGMTVEEYREGFRNHTLAFCMPAAHAEFSSHFLDEFSERILKKDWRDVSAASFSRIPSLLSGEESEDEVAAEIQEAYGVDVSDLPGLPFWEVVRRCAR*
soilL1_100466123	3300003267	Sugarcane Root And Bulk Soil	MQLTVEEYREGFRNHTLAFCMPAAHAEYTSEFLQQFSERILNQDWRDLPLETPAHVPSLITEDVSEPEMVATILELYGVDVSDLPGLPLWDVVRRCATAAGQPTRVC*
Ga0070676_112599742	3300005328	Miscanthus Rhizosphere	MTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSARAP*
Ga0070670_1001249663	3300005331	Switchgrass Rhizosphere	MQMTVEDYREGFRNHTLAFCMPAAHAEFTTEFLEGFSERILKQDWRDLPLATDRHAPSLLTDDDVSEPEMVATILELYGVDVSDLPGLPLWDVARRCAAATLPIGA*
Ga0070670_1004223852	3300005331	Switchgrass Rhizosphere	MNRGHPVSNCRTLPTEIPPEFAKPICQREGMNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLESHPQSPTLLAGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVMRRCARATTYSRV*
Ga0070670_1009366161	3300005331	Switchgrass Rhizosphere	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIPSLLTALESEAELAAEIHELYGVDVSDLPGLPLWDVIRRCAGVA*
Ga0070677_100936521	3300005333	Miscanthus Rhizosphere	SGAETDCSERAMNRGHPVSNCRTLPTEIPPEFAKPICQREGMNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSASAP*
Ga0070677_102529422	3300005333	Miscanthus Rhizosphere	MTTEEYREGFRNHTLAFCMPAAHAEFSSHFLEEFSARILKKDWRDASQASGSRIPSLVNDEESEDEVAAEIHEVYGVDVSDLPGLPFWEVVRRCAQSVTA*
Ga0068869_1000967062	3300005334	Miscanthus Rhizosphere	MTTEEYREGFRNHTLAFCMPAAHAEFSSHFLEEFSARILKKDWRDASQASGSRIPSLLNDEESEDEVAAEIHEVYGVDVSDLPGLPFWEVVRRCAQSVTA*
Ga0068869_1005632292	3300005334	Miscanthus Rhizosphere	MTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSASAP*
Ga0070682_1011162451	3300005337	Corn Rhizosphere	MHMTVEEYREGFRNHTLAFCMPAAHAEFSSHFLDEFSERILKKDWRELSMASYSRIPSLLGDDESEEEVVAEIHEVYGVDVSDLPGLPFWEVVRRCAQSAS
Ga0070682_1017435182	3300005337	Corn Rhizosphere	MTVEEFRQGFRDGTLAFCMPAAHAEISNDFLDEFSARILKMDWRDVSMADDSRISSLLGADESEVEIVAEIRELYGVDVSDLRGLPLWDVIRRIAGYLPAGR*
Ga0068868_1014758972	3300005338	Miscanthus Rhizosphere	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIASLLTALESEAELAAEIHELYGVDVSDLPGLPLWDVIRRCAGVA*
Ga0068868_1021673331	3300005338	Miscanthus Rhizosphere	MQMTVEEYREGFRNHTLAFCMPAAHAEFTSHFLDEFSERILKRDWREVSLTHCSRIPSLLCGEEAEEELVAEIREVYGVDVSDLPGLPFWEVVRRCARSAV*
Ga0070660_1007148482	3300005339	Corn Rhizosphere	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIASLLTALESEAELAAEIHELYGVDVSDLPGL
Ga0070689_1001018514	3300005340	Switchgrass Rhizosphere	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIASLLTALESEAERAAEIDELYGVDVSDLPGLPLWDVIRRCAGVA*
Ga0070661_1018739421	3300005344	Corn Rhizosphere	MAMTVEEFRQGFRDGTLAFCMPAAHAEISNDFLDEFSARILKMDWRDVSMADDSRISSLLGADESEVEIVAEIRELYGVDVSDLRGLP
Ga0070692_113123681	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	DYREGFRNHTLAFCMPAAHAEFTTEFLEGFSERILKQDWRDLPLATDRHAPSLLTDDDVSEPEMVATILELYGVDVSDLPGLPLWDVARRCAAATLPIGA*
Ga0070671_1002960452	3300005355	Switchgrass Rhizosphere	MAMTVEEFRQGFRDGTLAFCMPAAHAEISNDFLDEFSARILKMDWRDVSMADDSRISSLLGADESEVEIVAEIRELYGVDVSDLRGLPLWDVIRRIAGYLPAGR*
Ga0070671_1003106011	3300005355	Switchgrass Rhizosphere	LAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSARAP*
Ga0070671_1013726511	3300005355	Switchgrass Rhizosphere	CHRGSMQMTVEEYREGFRNHTLAFCMPAAHAEFSSHFLDEFSERILKKDWRELSMASYSRIPSLLGDDESEEEVVAEIHEVYGVDVSDLPGLPFWEVVRRCAQSAS*
Ga0070674_1012424201	3300005356	Miscanthus Rhizosphere	MNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLIGNESEDEIVTDIYAVYGVDVSDLPGLPMWEV
Ga0070673_1005725692	3300005364	Switchgrass Rhizosphere	MTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVMRRCARATTYSRV*
Ga0070673_1007061201	3300005364	Switchgrass Rhizosphere	AFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIASLLTALESEAELAAEIHELYGVDVSDLPGLPLWDVIRRCAGVA*
Ga0070700_1007139592	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPMTTEEYREGFRNHTLAFCMPAAHAEFSSHFLEEFSARILKKDWRDASQASGSRIPSLLNDEESEDEVAAEIHEVYGVDVSDLPGLPFWEVVRRCAQSVTA*
Ga0070700_1011325161	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MQMTVEEYREGFRNHTLAFCMPAAHAEFTSHFLDEFSERILKRDWREVSLTHCSRIPSLLCGEEAEEEVVAEIREVYGVDVSDLPGLP
Ga0070663_1006831512	3300005455	Corn Rhizosphere	MQMTVEEYREGFRNHTLAFCMPAAHAEFSSHFLDEFSERILKKDWRELSMASYSRIPSLLGDDESEEEVVAEIHEVYGVDVSDLPGLPFWEVVRRCAQSAS*
Ga0070663_1019253152	3300005455	Corn Rhizosphere	MTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVI
Ga0070678_1000229682	3300005456	Miscanthus Rhizosphere	MNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSARAP*
Ga0070678_1023496051	3300005456	Miscanthus Rhizosphere	MQMTVEDYREGFRNHTLAFCMPAAHAEFTTEFLEGFSERILKQDWRDLPLATDRQAPSLLTDDDVSEPEMVATILELYGVDVSDLPGLPLWDVARRCAAATLPISA*
Ga0068867_1012379701	3300005459	Miscanthus Rhizosphere	PPEFAKPICQREGMNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSARAP*
Ga0070672_1002902821	3300005543	Miscanthus Rhizosphere	NCRTLPTEIPPEFAKPICQREGMNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSASAP*
Ga0070693_1006070831	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	STPCHRRHMQMTVEEYREGFRNHTLAFCMPAAHAEFTSHFLDEFSERILKRDWREVSLTHCSRIPSLLCGEEAEEELVAEIREVYGVDVSDLPGLPFWEVVRRCAQSAA*
Ga0070665_1009662092	3300005548	Switchgrass Rhizosphere	MNMTVEQFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLESHPQSPTLLAGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVMRRCARATTYSRV*
Ga0070665_1009919392	3300005548	Switchgrass Rhizosphere	TVEQYREGFRNHTLAFCMPAAHAEYTSEFLQQFSERVLNQDWRDLPLETDLCAPTLVTDEVSEPEMAATILELYGVDVSDLPGLPLWDVVRRCAAATSESVPIC*
Ga0070665_1026271282	3300005548	Switchgrass Rhizosphere	HAEFSNDFLEEFSERILHRDWRDVMASHSRSPTLLGGRISEDEIATDIYALYGVDVSDLPGLPMWEVIRRCAKSSGAS*
Ga0070664_1000422405	3300005564	Corn Rhizosphere	MTVEEYREGFRNHTLAFCMPAAHAEFTSHFLDEFSERILKKDWRDFSLTHRSRAPSLLSGEETEAEVAAEIHEVYGVDVSDLPGLPFWEVLRRCARSAG*
Ga0070664_1000908723	3300005564	Corn Rhizosphere	MQMTVEDYREGFRNHTLAFCMPAAHAEFTTEFLEGFSERILKQDWRDLPLATDRHAPSLLTDDDVSEPEMVATILELYGVDVSDLPGLPLWDVARRCAAATLPISA*
Ga0070664_1009146342	3300005564	Corn Rhizosphere	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRVPSLLTALESEAELAAEIHELYGVDVSDLPGLPLWDVIRRCAGVA*
Ga0070664_1021293202	3300005564	Corn Rhizosphere	LPTEIPPEFAKPICQRKGMNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSASAP*
Ga0068859_1021689131	3300005617	Switchgrass Rhizosphere	RMPMTTEEYREEFRNHTLAFCMPAAHAEFSSHFLEEFSARILKKDWRDASQASGSRIPSLLNDEESEDEVAAEIHEVYGVDVSDLPGLPFWEVVRRCAQSVTA*
Ga0068860_1009528122	3300005843	Switchgrass Rhizosphere	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRVPSLLTALESEAELAAEIHEMYGVDVSDLPGLPLWDVIRRCAGVA*
Ga0068862_1007821112	3300005844	Switchgrass Rhizosphere	LAFCMPAAHAEFSSHFLEEFSARILKKDWRDASQASGSRIPSLVNDEESEDEVAAEIHEVYGVDVSDLPGLPFWEVVRRCAQSVTA*
Ga0070715_101207342	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MTVEEYREGFRNNTLAFCLPAAHAEYSSRFLDEFSERILKKDWREVSLESPVRIPSLLEGEESEDEVVAEIHELYGVDVSDLPGLPFWEVVRRCALSGG*
Ga0068871_1002358673	3300006358	Miscanthus Rhizosphere	MTVEDFRQGFRDGTLAFCMPAAHAEISNAFLDQFSERILKMDWRDVSMASDSGIASLLTCTESEEEIVVEIREHYGVDVADLPGLPLWDVIRRCAAAANAA*
Ga0068871_1010447192	3300006358	Miscanthus Rhizosphere	MQMTVEEYREGFRNHTLAFCMPAAHAEFTSHFLDEFSERILKRDWREVSLTSCSRIPSLLCGEEAEEEVVAEIHEVYGVDVSDLPGLPFWEVVRRCAQSAA*
Ga0079222_103076033	3300006755	Agricultural Soil	MQMTVEEYREGFRNGTLAFCMPAAHAEFSSDFLDRFSERILKQDWRDVSTSALTRIPSLLNSSEIEADSEAEIAAEIHELYGVDVSDLPGLPLWEVIRRCAASRN*
Ga0079222_103836471	3300006755	Agricultural Soil	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSAANPWRIPSLLNTLDSEAELAAEIHELYGVDVSDLPGLPLWDVIRRCAGVAS*
Ga0079220_112325721	3300006806	Agricultural Soil	MQLTVEEYREGFRNHTLAFCMPAAHAEYTSEFLQQFSERILNQDWRDLPLETPAHVPSLITEDVSEPEMVATILELYGVDVSDLPGLPLWDVVRRCADGQLEYLGR
Ga0079216_100098921	3300006918	Agricultural Soil	MNMTVEDFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILGRDWRDVLESHSRSPSLLTGNVSEDEIATDIYAIYGVDVSDLPGLPLWEVIRRCAK
Ga0079218_127239992	3300007004	Agricultural Soil	MRMTVEDYRNGFRDGTLAFCMPAAHAEYSAEFLDQFSERILGKDWREFSMADDSSIPSLLTSEISEEEVSAEIHELYGVDVSDLPGLPFWEVIRRCAPSSRRGET*
Ga0105240_116605491	3300009093	Corn Rhizosphere	MTVDEYREGFRNGTLAFCMPAAHAEFSNAFLEEFSERILKQDWRDVTLASLSRVPSLLTSTDSEDEMAAEIHELYGVDVSDLPGLPFWEVVRR
Ga0111538_104201503	3300009156	Populus Rhizosphere	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIPSLLTALESEAELAAEIHEMYGVDVSDLPGLPLWDVIRRCAGVA*
Ga0111538_116340781	3300009156	Populus Rhizosphere	MNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSRV*
Ga0105242_103791762	3300009176	Miscanthus Rhizosphere	MQMTVEEYREGFRNHTLAFCMPAAHAEFTSHFLDEFSERILKRDWREVSLTHCSRIPSLLCGEEAEEELVAEIREVYGVDVSDLPGLPFWEVVRRCAQSAA*
Ga0114940_100182303	3300009448	Groundwater	MNMTVDEFRQGFRDHTLVFCMPAAHAEISNDFLEEFSERILRRDWRDVMASHSRCPTLLGGRISEDEIATDIYALYGVDVSDLPGLPMWEVIRRCAKASGAA*
Ga0105238_106771452	3300009551	Corn Rhizosphere	MTVEEYREGFRNNTLAFCMPAAHAEYSSRFLEEFSERILKKDWREVPLESPVRIPSLLDGEESEDEVVAEIHELYGVDVSDLPGLPFWEVVRRCALSGG*
Ga0105238_111689232	3300009551	Corn Rhizosphere	MAMTVEEFRQGFRDGTLAFCLPAAHADISSQFLDEFSERILGMDWRDVSMASDLRIPSLLTGNKSEDEIVAEIHEVYRVDVSDLPGLPLWDVIRRCAAAGSTTP*
Ga0134121_107270312	3300010401	Terrestrial Soil	MAMTVEDFRQGFRDGTLAFCMPAAHVEISNAFLDQFSERILKMDWRDVSMAGDSGIASLLTCTESEEEIVVEIREHYGVDVADLPGLPLWDVIRRCAAAANAA*
Ga0134121_114172981	3300010401	Terrestrial Soil	MAMTVDDFRRGFRDGTLAFCMPAAHAEISSAFLDEFSERILKMDWRDVSMASDSGIPSLLSCTESEEEIAVEIHELYGVDVADLPG
Ga0150985_1010386612	3300012212	Avena Fatua Rhizosphere	MQMTVEEYREGFRNHTLAFCMPAAHAEFSSHFLDEFSERILRKDWRDVSMTNCSRTPSLLNDEESEEEIVAEIHEVYGVDVSDLPGLPLWEVLRRCAQSSG*
Ga0150985_1220876901	3300012212	Avena Fatua Rhizosphere	MAMTVEEFRQGFRDGTLAFCMPAAHAEISNAFLDEFSERILKMDWRDVSMADDPRIASMLSGDESEDEIVAEISELYGVDVSDLRGLPLWDVIRRIAGYLPAGR*
Ga0150985_1226617442	3300012212	Avena Fatua Rhizosphere	EGFRNHTLAFCMPAAHAEFSSHFLDEFSERILKKDWRELSMASYSRIPSLLSDDESEEEVVAEIQEVYGVDVSDLPGLPFWEVVRRCARSTS*
Ga0150984_1089977191	3300012469	Avena Fatua Rhizosphere	LMQMTVEEYREGFRNHTLAFCMPAAHAEFSSHFLDEFSERILKKDWRELSMASYSRIPSLLSDDESEEEVVAEIQEVYGVDVSDLPGLPFWEVVRRCARSTS*
Ga0150984_1190701592	3300012469	Avena Fatua Rhizosphere	MAMTVEEFRQGFRDGTLAFCMPAAHAEISNAFLDEFSERILKMDWRDVSMADDPRISAMLSGDESEDEIVAEISELYGVDVSDLRGLPLWDVIRRIAGYLPAGR*
Ga0157294_100409111	3300012892	Soil	EFAKPICQREGMNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSARAP*
Ga0157284_100578371	3300012893	Soil	MTTEEYREGFRNHTLAFCMPAAHAEFSSHFLEEFSARILKKDWRDASQASGSRIPSLVNDEESEDEVAAEIHEVYGVDVSD
Ga0157309_101929972	3300012895	Soil	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIASLVTALESEAELAAEIHELYGVDVSDLPGLPLWDVIRRCAGVA*
Ga0157291_102358202	3300012902	Soil	MTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIASLLTALESEAELAAEIHELYGVDVSDLPGLPLWDVIRRCAGVA*
Ga0157289_100980091	3300012903	Soil	MNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLIGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSACAP*
Ga0157282_101335011	3300012904	Soil	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIASLLTALESEAELAAEIHELYGVDVSDLPGLPL
Ga0157310_103823692	3300012916	Soil	MHMTVEEYREGFRNHTLAFCMPAAHAEFSSHFLDEFSERILKKDWRDVSMASCSRIPSLVSDDESEEEVVAEIHEVYGVDVSDLPGLPFWEVVRRCAAHSAG*
Ga0157310_105249511	3300012916	Soil	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIASLLTALESEAELAAEIHELYGVDVSDLPGLPLWDVIRRCA
Ga0157310_105788771	3300012916	Soil	MNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWE
Ga0164241_106076792	3300012943	Soil	MKMTAEDYREGFRNHTLAFCMPAAHAEFSSEFLEQFSERILRKDWREVSTLEYSRAPSLLTGNESEDEVVAEIYVQYGVDVSDLPGLPLWEVMRRCAGVQNKGG*
Ga0157375_108953571	3300013308	Miscanthus Rhizosphere	MQMTVEDYREGFRNHTLAFCMPAAHAEFTTEFLEGFSERILKQDWRDLPLATDRHAPSLLTDDDVSEPEMVATILELYGVDVSDLPGLPLWDVARRCAAAR
Ga0157375_135220392	3300013308	Miscanthus Rhizosphere	MAMTVEEFRQGFRDGTLAFCMPAAHAEISNDFLDEFSARILKMDWRDVSMADDSRISSLLGADESEVEIVAEIRELYGVDVSDLRG
Ga0134079_104951162	3300014166	Grasslands Soil	MQMTVEEYREGFRNRTLAFCMPAAHTEFSSHFLDVFSERILKKDWRDVSMASNSRIPSLLNDEESEEEIVAEIHELYGVDVSDLPGLPLW
Ga0157380_102379742	3300014326	Switchgrass Rhizosphere	MNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLIGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSASAP*
Ga0157376_114611451	3300014969	Miscanthus Rhizosphere	EFRQGFRDGTLAFCMPAAHAEISNDFLDEFSARILKMDWRDVSMADDSRISSLLGADESEVEIVAEIRELYGVDVSDLRGLPLWDVIRRIAGYLPAGR*
Ga0173480_103315142	3300015200	Soil	EFAKPICQREGMNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVMRRCARATTYSRV*
Ga0132258_132938132	3300015371	Arabidopsis Rhizosphere	MQLTVEQYREGFRNHTLAFCMPAAHAEYTSEFLQQFSERVLNQDWRDLPLETDLCAPTLVTDEVSEPEMAATILELYGVDVSDLPGLPLWDVVRRCAAATSESVPIC*
Ga0190272_130271221	3300018429	Soil	GFRDHTLAFCMPAAHAEYSSEFLDEFSARILGRDWRDVLESHSRSPSLLAGNDSEEEIAIDIYAVYGVDVSDLPGLPLWEVIRRCAKAAAN
Ga0190275_101017592	3300018432	Soil	MNCRPAPTGNPPEFARPICEPEGMNLTVEDFRQGFRDHTLVFCMPAAHAEFSSEFLDEFSARILRRDWRDVLESHSRSPSLLTGNESEDEVVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTHSV
Ga0190274_120637482	3300018476	Soil	RNGTLAFCLPAAHAEYSAEFLDRFSAQILGKDWREFSIADDSSIPSLLTSEISEAEVSAEIHELYGVDVSDLPGLPFWDVIRRCALSSRRGEA
Ga0190274_130135931	3300018476	Soil	MNMTVEQFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLESHSRSPSLLTGSESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTRSVG
Ga0173482_101419653	3300019361	Soil	MHMTVEEYREGFRNHTLAFCMPAAHAEFSSHFLDEFSERILKKDWRDVSMASCSRIPSLVSDDESEEEVVAEIHEVYGVDVSDLPGLPFWEV
Ga0173482_101742681	3300019361	Soil	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIPSLLTALESEAELAAEIHELYGVDVSDLPGLPLWDVIRRCAGVA
Ga0173482_103957951	3300019361	Soil	ARIDGTDGGATTAERLQPVGDGRSGAETDCSERAMNRGHPVSNCRTLPTEIPPEFAKPICQREGMNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSARAP
Ga0173482_104681642	3300019361	Soil	MRMTVEDYRNGFRNGTLAFCMPAAHAEYSTAFLEEFSVRILGKDWREFSMVADSSIPSLLTSEVSEEEVAAEIHELYGVDVSDLPGLPFWEVIRRCAPSSRRGET
Ga0212091_100930691	3300022549	Groundwater	DRMNMTVDEFRQGFRDHTLVFCMPAAHAEISNDFLEEFSERILRRDWRDVMASHSRCPTLLGGRISEDEIATDIYALYGVDVSDLPGLPMWEVIRRCAKASGAA
Ga0247746_10735572	3300022886	Soil	MTTEEYREGFRNHTLAFCMPAAHAEFSSHFLEEFSARILKKDWRDASQASGSRIPSLLNDEESEDEVAAEIHEVYGVDVSDLPGLPFWEVVRRCAQSVTA
Ga0247794_100243213	3300024055	Soil	MHMTVEEYREGFRNHTLAFCMPAAHAEFSSHFLDEFSERILKKDWRDVSMASCSRIPSLVSDDESEEEVVAEIHEVYGVDVSDLPGLPFWEVVRRCAAHSAG
Ga0207682_100175803	3300025893	Miscanthus Rhizosphere	MNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSASAP
Ga0207682_104159562	3300025893	Miscanthus Rhizosphere	MTTEEYREGFRNHTLAFCMPAAHAEFSSHFLEEFSARILKKDWRDASQASGSRIPSLVNDEESEDEVAAEIHEVYGVDVSDLPGLPFWEVVRRCAQSVTA
Ga0207692_107757192	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTVEEYREGFRNNTLAFCLPAAHAEYSSRFLDEFSERILKKDWREVSLESPVRIPSLLDCEESEDEVVAEIHELYGVDVSDLPGLPFWEVVRRCAL
Ga0207688_105928402	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MQMTVEDYREGFRNHTLAFCMPAAHAEFTTEFLEGFSERILKQDWRDLPLATDRHAPSLLTDDDVSEPEMVATILELYGVDVSDLPGLPLTELARTALDRAGLAGSGGNRVP
Ga0207688_107999891	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIASLLTALESEAELAAEIHELYGVDVSDLPGLPLWDVIRRCAGVA
Ga0207685_105785132	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MAMTVEDFRRGFRDGTLAFCMPAAHAEISNAFLDEFSERILKMDWRDVSMAGDSGIPSLLTCNESEEEIAVEIHEFYG
Ga0207645_101476842	3300025907	Miscanthus Rhizosphere	MTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSASAP
Ga0207643_105120192	3300025908	Miscanthus Rhizosphere	MQMTVEDYREGFRNHTLAFCMPAAHAEFTTEFLEGFSERILKQDWRDLPLATDRQAPSLLTDDDVSEPDMVATILELYGVDVSDLPGLPLWDVARRCAAATLPISA
Ga0207663_103832143	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTVEEYREGFRNNTLAFCMPAAHAEYSSRFLDEFSERILKKDWREVSLESPVRIPSLLEGEESEDEVVAEIHELYGVDVSDLPGLPFWEVVRRCALSGG
Ga0207662_100787704	3300025918	Switchgrass Rhizosphere	MTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIASLLTALESEAELAAEIHELYGVDVSDLPGLPLWDVIRRCAGVA
Ga0207681_106179761	3300025923	Switchgrass Rhizosphere	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIASLLTALESEAELAAEIHELYGVDVSD
Ga0207650_104721862	3300025925	Switchgrass Rhizosphere	MQMTVEDYREGFRNHTLAFCMPAAHAEFTTEFLEGFSERILKQDWRDLPLATDRHAPSLLTDDDVSEPEMVATILELYGVDVSDLPGLPLWDVARRCAAATLPIGA
Ga0207650_106774671	3300025925	Switchgrass Rhizosphere	TFQGSRACDRAPMQMTVEDYREGFRNHTLAFCMPAAHAEFTTEFLEGFSERILKQDWRDLPLATDRQAPSLLTDDDVSEPEMVATILELYGVDVSDLPGLPLWDVARRCAAATLPISA
Ga0207650_112804112	3300025925	Switchgrass Rhizosphere	PEFAKPICQRKGMNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVMRRCARATTYSRV
Ga0207659_101957012	3300025926	Miscanthus Rhizosphere	MTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSARAP
Ga0207659_109556331	3300025926	Miscanthus Rhizosphere	GFRNHTLAFCMPAAHAEFTTEFLEGFSERILKQDWRDLPLATDRHAPSLLTDDDVSEPEMVATILELYGVDVSDLPGLPLWDVARRCAAATLPIGA
Ga0207701_102322582	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLIGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSARAP
Ga0207644_112803031	3300025931	Switchgrass Rhizosphere	ASGPCHRGSMQMTVEEYREGFRNHTLAFCMPAAHAEFSSHFLDEFSERILKKDWRELSMASYSRIPSLLGDDESEEEVVAEIHEVYGVDVSDLPGLPFWEVVRRCAQSAS
Ga0207644_116411602	3300025931	Switchgrass Rhizosphere	MAMTVEEFRQGFRDGTLAFCMPAAHAEISNDFLDEFSARILKMDWRDVSMADDSRISSLLGADESEVEIVAEIRELYGVDVSDLRGLPLWDVIRRIAGYLPAGR
Ga0207669_104487942	3300025937	Miscanthus Rhizosphere	AFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSASAP
Ga0207689_111000932	3300025942	Miscanthus Rhizosphere	MNRGHPVSNCRTLPTEIPPEFAKPICQREGMNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLESHPQSPTLLAGNESEDEIVTAIYAVYGVDVSDLPGLPMWEVIRRCARATTYSASAP
Ga0207679_101101212	3300025945	Corn Rhizosphere	MTVEEYREGFRNHTLAFCMPAAHAEFTSHFLDEFSERILKKDWRDFSLTHRSRAPSLLSGEETEAEVAAEIHEVYGVDVSDLPGLPFWEVLRRCARSAG
Ga0207679_117107262	3300025945	Corn Rhizosphere	MNRGRSVSNCQTLPTEIPPEFAKPICQRKGMNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLIGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSASAP
Ga0207651_102258913	3300025960	Switchgrass Rhizosphere	DRAPMQMTVEDYREGFRNHTLAFCMPAAHAEFTTEFLEGFSERILKQDWRDLPLATDRHAPSLLTDDDVSEPEMVATILELYGVDVSDLPGLPLWDVARRCAAATLPIGA
Ga0207651_113802221	3300025960	Switchgrass Rhizosphere	AMNRGRSVSNCQTLPTEIPPEFAKPICQRKGMNMTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVMRRCARATTYSRV
Ga0207677_116535592	3300026023	Miscanthus Rhizosphere	NGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIASLLTALESEAELAAEIHELYGVDVSDLPGLPLWDVIRRCAGVA
Ga0207703_117589741	3300026035	Switchgrass Rhizosphere	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIASLLTALESEAELAAEIHELYGVDVSDLPGLPLWDVIRRC
Ga0207678_103901722	3300026067	Corn Rhizosphere	MQMTVEEYREGFRNHTLAFCMPAAHAEFSSHFLDEFSERILKKDWRELSMASYSRIPSLLGDDESEEEVVAEIHEVYGVDVSDLPGLPFWEVVRRCAQSAS
Ga0207708_103091171	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIPSLLTALESEAELAAEIHELYGVDVSDLPGLPLWD
Ga0207708_108849012	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTTEEYREGFRNHTLAFCMPAAHAEFSSHFLEEFSARILKKDWRDASQASGSRIPSLLNDEESEDEVAAEIHEVYGVDVSDLPGLPFWEVVRR
Ga0207648_104410812	3300026089	Miscanthus Rhizosphere	MPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVIRRCARATTYSARAP
Ga0207676_105816021	3300026095	Switchgrass Rhizosphere	MQMTVEDYREGFRNHTLAFCMPAAHAEFTTEFLEGFSERILKQDWRDLPLATDRHAPSLLTDDDVSEPEMVATILELYGVDVSDLPG
Ga0207674_102387234	3300026116	Corn Rhizosphere	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRVPSLLTALESEAELAAEIHEMYGVDVSDLPGLPLWDVIRRCAGVA
Ga0207675_1016159981	3300026118	Switchgrass Rhizosphere	MTVEEFRQGFRDHTLAFCMPAAHAEFSSEFLDEFSARILRRDWRDVLVSHSRSPSLLVGNESEDEIVTDIYAVYGVDVSDLPGLPMWEVMRRCARATTYSRV
Ga0207683_120096051	3300026121	Miscanthus Rhizosphere	MQMTVEDYREGFRNHTLAFCMPAAHAEFTTEFLEGFSERILKQDWRDLPLATDRQAPSLLTDDDVSEPEMVATILELYGVDVSDLPGLPLWDVARRCAAATLPISA
Ga0247662_10933291	3300028293	Soil	MTVEEYRRGFRSHTLAFCMPAAHAEITSHFLDQFSDRILKKDWRDVSLTSCSRAPSLLSGEESEEEVVAEIHEIYGVDVSDLPGLPFWEVVRRCARATVSSTRTAP
Ga0268265_121860321	3300028380	Switchgrass Rhizosphere	LAFCMPAAHAEFSSHFLEEFSARILKKDWRDASQASGSRIPSLVNDEESEDEVAAEIHEVYGVDVSDLPGLPFWEVVRRCAQSVTA
Ga0307408_1000586264	3300031548	Rhizosphere	MKMTVEQYREGFRNHTLAFCMPAAHAEFSSDFLEQFSERILKKDWRDVSALADAGIPSLLLDNDDTEDEVAAEIEVQYGVDVSDLPGLPLWEVVRRCAQTKGG
Ga0310813_104220432	3300031716	Soil	MQMTVEEYREGFRNGTLAFCMPAAHAEISSEFLDEFSERILKQDWRDVSTANPWRIASLVTALESEAELAAEIHELYGVDVSDLPGLPLWDVIRRCAGVA
Ga0307405_101927932	3300031731	Rhizosphere	MKMTVEQYREGFRNHTLAFCMPAAHAEFSSDFLEQFSERILKKDWRDVSALADSGIPSLLLDNDDTEDEVAAEIEVQYGVDVSDLPGLPLWEVVRRCAQTKGG
Ga0307406_118681972	3300031901	Rhizosphere	MKMTAEDYREGFRNHTLAFCMPAAHAEFSSEFLEQFSERILRKDWREVSTLEYSRAPSLLTGNESEDEVVAEIYVQYGVDVSDLPGLPLWEVMRRCAGVQNKGG
Ga0310884_106533172	3300031944	Soil	DRPRACDRDRMPMTTEEYREGFRNHTLAFCMPAAHAEFSSHFLEEFSARILKKDWRDASQASGSRIPSLVNDEESEDEVAAEIHEVYGVDVSDLPGLPFWEVVRRCAQSVTA
Ga0310897_101541803	3300032003	Soil	MTTEEYREGFRNHTLAFCMPAAHAEFSSHFLEEFSARILKKDWRDASQASGSRIPSLLNDEESEDEVAAEIHEVYGVDVSDLPGLPFWEVVRRCAQ
Ga0315910_114004731	3300032144	Soil	MTLEEFRKALRDGTVAFCLPAAHAEISNDFLDDFSARVLKQDWRDVMAHSRSRIPSLLIGETSEAEVIAEIQEFYG
Ga0315912_100152795	3300032157	Soil	MPLTVEEYREGFRNRTLAFCLPAAHAEFSSDFLDEFSERFLKVDWRELSLAGGTCISALLAGNTSEQEVAAEILETYGVDVTDLPGLPLWEVVRRCAAATA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F055245

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences