NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F052623

Metagenome / Metatranscriptome Family F052623

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F052623
Family Type Metagenome / Metatranscriptome
Number of Sequences 142
Average Sequence Length 43 residues
Representative Sequence MNRAEIIRALIDGLIDSGMDVTVAASEADLRARVARRLGTPYR
Number of Associated Samples 121
Number of Associated Scaffolds 142

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.93 %
% of genes near scaffold ends (potentially truncated) 90.85 %
% of genes from short scaffolds (< 2000 bps) 88.03 %
Associated GOLD sequencing projects 116
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (90.845 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(11.268 % of family members)
Environment Ontology (ENVO) Unclassified
(32.394 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(53.521 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.85%    β-sheet: 0.00%    Coil/Unstructured: 59.15%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 142 Family Scaffolds
PF07690MFS_1 16.20
PF00654Voltage_CLC 9.15
PF01425Amidase 7.75
PF12704MacB_PCD 2.82
PF02518HATPase_c 2.11
PF02738MoCoBD_1 1.41
PF03372Exo_endo_phos 1.41
PF13426PAS_9 1.41
PF01019G_glu_transpept 1.41
PF00805Pentapeptide 0.70
PF10442FIST_C 0.70
PF02355SecD_SecF 0.70
PF00571CBS 0.70
PF04389Peptidase_M28 0.70
PF13372Alginate_exp 0.70

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 142 Family Scaffolds
COG0038H+/Cl- antiporter ClcAInorganic ion transport and metabolism [P] 9.15
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 7.75
COG0405Gamma-glutamyltranspeptidaseAmino acid transport and metabolism [E] 1.41
COG0341Preprotein translocase subunit SecFIntracellular trafficking, secretion, and vesicular transport [U] 0.70
COG0342Preprotein translocase subunit SecDIntracellular trafficking, secretion, and vesicular transport [U] 0.70
COG1357Uncharacterized conserved protein YjbI, contains pentapeptide repeatsFunction unknown [S] 0.70

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms90.85 %
UnclassifiedrootN/A9.15 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2070309004|prs_FIHLEPW02RMLKPAll Organisms → cellular organisms → Bacteria505Open in IMG/M
2124908041|P3_CLC_ConsensusfromContig58823Not Available652Open in IMG/M
3300002568|C688J35102_118587578All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300003321|soilH1_10109239Not Available1020Open in IMG/M
3300004081|Ga0063454_100599277All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300004114|Ga0062593_100894413All Organisms → cellular organisms → Bacteria → Acidobacteria897Open in IMG/M
3300004153|Ga0063455_101654960All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300004157|Ga0062590_102944175All Organisms → cellular organisms → Bacteria → Acidobacteria510Open in IMG/M
3300005093|Ga0062594_100866346All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300005178|Ga0066688_10232439All Organisms → cellular organisms → Bacteria → Acidobacteria1177Open in IMG/M
3300005293|Ga0065715_10901234All Organisms → cellular organisms → Bacteria → Acidobacteria574Open in IMG/M
3300005294|Ga0065705_10869472All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium586Open in IMG/M
3300005330|Ga0070690_100077663All Organisms → cellular organisms → Bacteria2168Open in IMG/M
3300005332|Ga0066388_103210642All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium835Open in IMG/M
3300005343|Ga0070687_100592607All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300005354|Ga0070675_100868088All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300005355|Ga0070671_100664159All Organisms → cellular organisms → Bacteria903Open in IMG/M
3300005356|Ga0070674_101745451All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium563Open in IMG/M
3300005367|Ga0070667_100074556All Organisms → cellular organisms → Bacteria2895Open in IMG/M
3300005440|Ga0070705_100928231All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300005441|Ga0070700_102006802All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium502Open in IMG/M
3300005456|Ga0070678_100285269All Organisms → cellular organisms → Bacteria → Acidobacteria1398Open in IMG/M
3300005457|Ga0070662_101086863All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300005458|Ga0070681_10060728All Organisms → cellular organisms → Bacteria3756Open in IMG/M
3300005459|Ga0068867_101472305All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300005518|Ga0070699_101125488All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium720Open in IMG/M
3300005546|Ga0070696_101577079All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300005555|Ga0066692_10940172Not Available529Open in IMG/M
3300005718|Ga0068866_10060462All Organisms → cellular organisms → Bacteria1964Open in IMG/M
3300005719|Ga0068861_102099131All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300005764|Ga0066903_100100428All Organisms → cellular organisms → Bacteria3906Open in IMG/M
3300005764|Ga0066903_106798119All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300005764|Ga0066903_107938670All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300005764|Ga0066903_109042462All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300005840|Ga0068870_10155984All Organisms → cellular organisms → Bacteria1349Open in IMG/M
3300005842|Ga0068858_101780201All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300006358|Ga0068871_100462293All Organisms → cellular organisms → Bacteria1139Open in IMG/M
3300006755|Ga0079222_10223883All Organisms → cellular organisms → Bacteria1156Open in IMG/M
3300006791|Ga0066653_10284471All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300006806|Ga0079220_11231030All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300006854|Ga0075425_102715861All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300006854|Ga0075425_102774917All Organisms → cellular organisms → Bacteria → Acidobacteria539Open in IMG/M
3300006871|Ga0075434_100043399All Organisms → cellular organisms → Bacteria → Proteobacteria4460Open in IMG/M
3300006871|Ga0075434_100630989All Organisms → cellular organisms → Bacteria → Acidobacteria1090Open in IMG/M
3300006871|Ga0075434_101182245All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium777Open in IMG/M
3300006880|Ga0075429_100446168All Organisms → cellular organisms → Bacteria1134Open in IMG/M
3300006881|Ga0068865_101122875Not Available693Open in IMG/M
3300006904|Ga0075424_100161763All Organisms → cellular organisms → Bacteria2373Open in IMG/M
3300006904|Ga0075424_101374198Not Available750Open in IMG/M
3300006953|Ga0074063_12681931All Organisms → cellular organisms → Bacteria → Acidobacteria1089Open in IMG/M
3300007076|Ga0075435_101008362All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300009012|Ga0066710_101111767All Organisms → cellular organisms → Bacteria1222Open in IMG/M
3300009038|Ga0099829_11022630All Organisms → cellular organisms → Bacteria → Acidobacteria685Open in IMG/M
3300009093|Ga0105240_11640474All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium672Open in IMG/M
3300009101|Ga0105247_11462812All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300009137|Ga0066709_100355164All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2015Open in IMG/M
3300009137|Ga0066709_101342974All Organisms → cellular organisms → Bacteria1045Open in IMG/M
3300009137|Ga0066709_102717515All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_2_20CM_2_66_4659Open in IMG/M
3300009147|Ga0114129_11606920All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300009147|Ga0114129_12272399All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300009156|Ga0111538_12975199All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300009162|Ga0075423_10548579Not Available1217Open in IMG/M
3300009162|Ga0075423_11168123All Organisms → cellular organisms → Bacteria821Open in IMG/M
3300009162|Ga0075423_12274825All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium589Open in IMG/M
3300009162|Ga0075423_13123418All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300009553|Ga0105249_12629052All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium575Open in IMG/M
3300009553|Ga0105249_13328078All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300009660|Ga0105854_1232114All Organisms → cellular organisms → Bacteria → Acidobacteria623Open in IMG/M
3300010364|Ga0134066_10068335All Organisms → cellular organisms → Bacteria960Open in IMG/M
3300010371|Ga0134125_11931238Not Available642Open in IMG/M
3300010375|Ga0105239_12939280All Organisms → cellular organisms → Bacteria → Acidobacteria556Open in IMG/M
3300010376|Ga0126381_100215493All Organisms → cellular organisms → Bacteria2577Open in IMG/M
3300010397|Ga0134124_10181941All Organisms → cellular organisms → Bacteria1896Open in IMG/M
3300010399|Ga0134127_10747946All Organisms → cellular organisms → Bacteria → Acidobacteria1022Open in IMG/M
3300010399|Ga0134127_12557541All Organisms → cellular organisms → Bacteria → Acidobacteria590Open in IMG/M
3300010401|Ga0134121_10701256All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium960Open in IMG/M
3300010401|Ga0134121_11976970All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300010401|Ga0134121_12729434All Organisms → cellular organisms → Bacteria → Acidobacteria539Open in IMG/M
3300011270|Ga0137391_10632438All Organisms → cellular organisms → Bacteria → Acidobacteria895Open in IMG/M
3300011270|Ga0137391_11129439All Organisms → cellular organisms → Bacteria → Acidobacteria631Open in IMG/M
3300012360|Ga0137375_10122613All Organisms → cellular organisms → Bacteria2594Open in IMG/M
3300012469|Ga0150984_115350245All Organisms → cellular organisms → Bacteria → Acidobacteria629Open in IMG/M
3300012469|Ga0150984_117109278All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300012925|Ga0137419_10007564All Organisms → cellular organisms → Bacteria5633Open in IMG/M
3300012929|Ga0137404_11565856All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium611Open in IMG/M
3300012930|Ga0137407_12442304All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300012944|Ga0137410_12071553All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300012957|Ga0164303_11563850All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300012961|Ga0164302_11550067Not Available548Open in IMG/M
3300012972|Ga0134077_10197495All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium819Open in IMG/M
3300013297|Ga0157378_12047284All Organisms → cellular organisms → Bacteria → Acidobacteria623Open in IMG/M
3300013306|Ga0163162_10223630All Organisms → cellular organisms → Bacteria2012Open in IMG/M
3300015372|Ga0132256_100900809All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1000Open in IMG/M
3300015373|Ga0132257_100647698All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1309Open in IMG/M
3300015373|Ga0132257_103982049Not Available537Open in IMG/M
3300015374|Ga0132255_103788257All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300016341|Ga0182035_11809441All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300017974|Ga0187777_10021268All Organisms → cellular organisms → Bacteria4124Open in IMG/M
3300018028|Ga0184608_10264897All Organisms → cellular organisms → Bacteria → Acidobacteria756Open in IMG/M
3300018076|Ga0184609_10506551All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300018078|Ga0184612_10314063All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300018431|Ga0066655_10058813All Organisms → cellular organisms → Bacteria2013Open in IMG/M
3300018481|Ga0190271_10011217All Organisms → cellular organisms → Bacteria6384Open in IMG/M
3300021073|Ga0210378_10155048Not Available883Open in IMG/M
3300021080|Ga0210382_10093768All Organisms → cellular organisms → Bacteria1243Open in IMG/M
3300021339|Ga0193706_1110924All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium747Open in IMG/M
3300025271|Ga0207666_1008403All Organisms → cellular organisms → Bacteria1379Open in IMG/M
3300025315|Ga0207697_10221493All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300025893|Ga0207682_10340289All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium706Open in IMG/M
3300025908|Ga0207643_10270049All Organisms → cellular organisms → Bacteria1052Open in IMG/M
3300025910|Ga0207684_10356231All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia1259Open in IMG/M
3300025917|Ga0207660_10759357All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300025927|Ga0207687_11853704All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300025933|Ga0207706_10048794All Organisms → cellular organisms → Bacteria3744Open in IMG/M
3300025933|Ga0207706_11462379All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300025934|Ga0207686_11007813All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300025938|Ga0207704_10883288Not Available751Open in IMG/M
3300025941|Ga0207711_11961648All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300025961|Ga0207712_11250223All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium663Open in IMG/M
3300026023|Ga0207677_10679396All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300026142|Ga0207698_11838918All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300026276|Ga0209847_1092760Not Available561Open in IMG/M
3300027869|Ga0209579_10483883Not Available672Open in IMG/M
3300028381|Ga0268264_10121579All Organisms → cellular organisms → Bacteria2302Open in IMG/M
3300031226|Ga0307497_10608602All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300031231|Ga0170824_118504130All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300031547|Ga0310887_10260661All Organisms → cellular organisms → Bacteria → Acidobacteria971Open in IMG/M
3300031562|Ga0310886_10501726All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium732Open in IMG/M
3300031731|Ga0307405_11700827All Organisms → cellular organisms → Bacteria → Acidobacteria559Open in IMG/M
3300031879|Ga0306919_10570727All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300031912|Ga0306921_12248233All Organisms → cellular organisms → Bacteria → Acidobacteria573Open in IMG/M
3300031939|Ga0308174_10387491All Organisms → cellular organisms → Bacteria1123Open in IMG/M
3300031943|Ga0310885_10174288All Organisms → cellular organisms → Bacteria → Acidobacteria1046Open in IMG/M
3300032000|Ga0310903_10490065All Organisms → cellular organisms → Bacteria → Acidobacteria640Open in IMG/M
3300032013|Ga0310906_10575445All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300032064|Ga0318510_10163402All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300032075|Ga0310890_11417710All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300032089|Ga0318525_10467627All Organisms → cellular organisms → Bacteria → Acidobacteria646Open in IMG/M
3300032211|Ga0310896_10181209All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300032782|Ga0335082_10046844All Organisms → cellular organisms → Bacteria4499Open in IMG/M
3300034268|Ga0372943_0697360All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300034819|Ga0373958_0223968All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere11.27%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil5.63%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.93%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.52%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.52%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.52%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.52%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.52%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.11%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.11%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.11%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.11%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.11%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.11%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.41%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.41%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.41%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil1.41%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.41%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.41%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.41%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.41%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.41%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.70%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.70%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.70%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.70%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.70%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.70%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.70%
Green-Waste CompostEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost0.70%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.70%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.70%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.70%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.70%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.70%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.70%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.70%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.70%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.70%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.70%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.70%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.70%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2070309004Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto RicoEnvironmentalOpen in IMG/M
2124908041Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009660Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021339Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1EnvironmentalOpen in IMG/M
3300025271Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026276Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M
3300034819Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
prs_009545402070309004Green-Waste CompostMNRAEIIRALIDGLIDSGMDVTVAASEADLRARVARRLGTPYR
P3_CLC_023227502124908041SoilLTKDMRSKSGKAMNRAEIIRALIDGLIESGMDVAGAGSEANLQARVARRLGTPYR
C688J35102_11858757823300002568SoilKTGRALNRAEIIRALIDGLIESGLDVHASPTEADLRAMVARRLGTPYR*
soilH1_1010923923300003321Sugarcane Root And Bulk SoilEIIRALIDGLIDSGMDVSVAASEADLRARVARRLGTPFR*
Ga0063454_10059927713300004081SoilTDGRGKTGRALNRAEIIRALIDGLIESGLDVHASPTEADLRAMVARRLGTPYR*
Ga0062593_10089441313300004114SoilSGKVLNRAEIIRALIDGLIDSGMDITSTATEADLRAKVARHLGTPFR*
Ga0063455_10165496013300004153SoilTRGTRDRNGKAMNRAEVIRALIDGLIESGMDLADASSEATLRARVARRLGTPYR*
Ga0062590_10294417523300004157SoilNRAEIIRALIDGLIDSGLDITGSGTEADLRARVARRLGTPFR*
Ga0062594_10086634613300005093SoilGKTGKLLNRAEIIRALIDGLIDSGMDITGAESERDLRGRVARRLGTPYR*
Ga0066688_1023243933300005178SoilMSRKSLNRAEIIRALIDGLIDSGMDITTSATEADLRARVARRLGTPYR*
Ga0065715_1090123413300005293Miscanthus RhizosphereIRGKSGKVLNRAEIIRALIDGLIDSGIDVGATPSEADLRAKVARHLGTPFR*
Ga0065705_1086947223300005294Switchgrass RhizosphereTDIRGKTGKLLNRAEIIRALIDGLIESGMDITATASEADLRGRVARRLGTPYR*
Ga0070690_10007766343300005330Switchgrass RhizosphereMLNRAEIIRALIDGLLDSGMDITGSASEADLRARVARRLGSPYR*
Ga0066388_10321064223300005332Tropical Forest SoilRNGKVFNRTEIIRALIDGLIDSGMDIDGAASEADLRARVARRLGTPYR*
Ga0070687_10059260713300005343Switchgrass RhizosphereTRARTGKSLNRAEIIRALIDALIDSGMDITAIGSEADLRARVARRLATPYR*
Ga0070675_10086808813300005354Miscanthus RhizosphereSGKVLNRAGLIRALIDALIDSGLDITTSASETAVRAQVARRLGTPFR*
Ga0070671_10066415913300005355Switchgrass RhizosphereKSVGRSLNRAEIIRALIDALIESGIDIDSVTSEADLRARVARRLATPFR*
Ga0070674_10174545113300005356Miscanthus RhizosphereMNRAEIIRALIDGLIESGMDIVGAASEADLRARVARRLATPYR*
Ga0070667_10007455633300005367Switchgrass RhizosphereMRSRNGKAMNRAEIIRALIDGLIESGMDVVAAGSEANLRARVARRLGTPYR*
Ga0070705_10092823113300005440Corn, Switchgrass And Miscanthus RhizosphereKVINRAEIIRALIDALIDSGLDVTSSGSEADLRGRVARRLGTSLR*
Ga0070700_10200680223300005441Corn, Switchgrass And Miscanthus RhizosphereKSGKVLNRAEIIRALIDGLIDSGMDITAAATEADLRARVARRLGSPYR*
Ga0070678_10028526923300005456Miscanthus RhizosphereMRSKHGKTMNRAEIIRALIDGLIESGMDVAAAGSEADLRARVARRLGTPY
Ga0070662_10108686313300005457Corn RhizosphereNRAEIIRALIDGLIDSGMDVTAADSEADLRALLGRRLGSPHR*
Ga0070681_1006072843300005458Corn RhizosphereGASGKVLNRAEIIRALIDGLIDSGMDVTAAASEADLRGRVARRLGTPFR*
Ga0068867_10147230523300005459Miscanthus RhizosphereRAEIIRALIDALIESGIDIDSVTSEADLRARVARRLATPFR*
Ga0070699_10112548813300005518Corn, Switchgrass And Miscanthus RhizosphereNRAEIIRALIDGLLDSGMDITGSASEADLRARVARRLGSPYR*
Ga0070696_10157707923300005546Corn, Switchgrass And Miscanthus RhizosphereTGKLLNRAEIIRALIDGLIDSGMDITGAESERDLRGRVARRLGTPSR*
Ga0066692_1094017213300005555SoilNRAEIIRALIDALLESGMDLKGAASEAELRARVSRRLGTPYR*
Ga0068866_1006046213300005718Miscanthus RhizosphereAEIIRALIDGLIESGMDVVAAGSEANLRARVARRLGTPYR*
Ga0068861_10209913113300005719Switchgrass RhizosphereEIRGKSGKLLNRAEIIRALIDGLIDSGMDITAAATEADLRARVARRLGSPYR*
Ga0066903_10010042853300005764Tropical Forest SoilMRTRNGKAMNRAEIIRALIDGLIESGMDVVGAGSEANLRARVARRLGTPYR*
Ga0066903_10679811913300005764Tropical Forest SoilMLNRAEIIRALIDGLLDSGMDISGTISEADLRARVARRLGSPYR*
Ga0066903_10793867013300005764Tropical Forest SoilNRAEIIRALIDGLIDSGMDVTASGSEADLRAKVARRLGTPFR*
Ga0066903_10904246213300005764Tropical Forest SoilLIDGLIDSGMDVTGTGSEADLRARVARRLGPAVR*
Ga0068870_1015598423300005840Miscanthus RhizospherePLNRAEIIRALIDALIESGMDIAAVSSEADLRARVARRLATPFR*
Ga0068858_10178020133300005842Switchgrass RhizosphereIRALIDGLLDSGMDITATGSEAELRARVARRLGSSSR*
Ga0068871_10046229333300006358Miscanthus RhizosphereMNRAEIIRALIDGLIESGMDVVGAGSEANLRARVARRLGTPYR*
Ga0079222_1022388323300006755Agricultural SoilAEIIRALIDGLIDSGMDITAAGSEADLRIRVARRLAAASR*
Ga0066653_1028447123300006791SoilMLNRAEIIRALIDGLLDSGMDISGTISEADLRSRVARRLGPPYR*
Ga0079220_1123103013300006806Agricultural SoilIRALIDGLIDSGMDITAAGSEADLRIRVARRLAAASR*
Ga0075425_10271586113300006854Populus RhizosphereLIDGLIDSGMDITSTASEADLRARVARRLGTPYR*
Ga0075425_10277491713300006854Populus RhizosphereIIRALIDALIESGMDITAVGSEADLRARVARRLGTPYR*
Ga0075434_10004339913300006871Populus RhizosphereALIDGLLDSGMDLTGSASEADLRARIARRLGSAYR*
Ga0075434_10063098923300006871Populus RhizosphereMRGRGVRTKPFTRAEIIRALIDGLIDSGMDISGSGSEADLRARVARHLGTSFR*
Ga0075434_10118224513300006871Populus RhizosphereIRALIDGLIDSGMDITGAASEADLRARVARRLGTPFR*
Ga0075429_10044616833300006880Populus RhizosphereLNRAEIIRALIDGLIDSGMDITGAESERDLRGRVARRLGTPYR*
Ga0068865_10112287523300006881Miscanthus RhizosphereRALIDGLIDSGMDVTATASEADLRARVARRLGTPYR*
Ga0075424_10016176333300006904Populus RhizosphereGRVLNRAEIIRALIDGLIDSGIDVTATGSEADLRARVARRLGSPYR*
Ga0075424_10137419813300006904Populus RhizosphereLIDGLIDSGMDVTATGSEADLRARVARRLGTSLR*
Ga0074063_1268193133300006953SoilIIRALIDGLIESGMDIAGAGSEANLRARVARRLGTPYR*
Ga0075435_10100836223300007076Populus RhizosphereLIDALIDSGMDITAVGSEADLRARVARRLGTPYR*
Ga0066710_10111176713300009012Grasslands SoilNRAEIIRALIDGFIASGMDISATASERDLRDHVTRRLA
Ga0099829_1102263013300009038Vadose Zone SoilIRGHSGKGLNRAEIIRALIDGLIDSGMDVTSTASEADLRGRLARRLGSPYR*
Ga0105240_1164047433300009093Corn RhizosphereEIIRALIDGLIESGMDVASAGSEADLRARVARRLGTPYR*
Ga0105247_1146281213300009101Switchgrass RhizosphereRALIDGVIDSGMDIAGAGSEADLRARVARRLGTPSR*
Ga0066709_10035516413300009137Grasslands SoilKVLNRAEIIRALIDGLIDSGMDITAVSSEADLRARIARRLGSPFR*
Ga0066709_10134297413300009137Grasslands SoilAMNRAKIIRALIDGLIDSGMDITGSGSEGDLRARVARRLGTSFR*
Ga0066709_10271751513300009137Grasslands SoilKSLNRAEIIRALIDGLIDSGMDITTSATEADLRARVARRLGTPYR*
Ga0114129_1160692043300009147Populus RhizosphereALIDGLIDSGMDVTATGSEADLRARVARRLGSPYR*
Ga0114129_1227239913300009147Populus RhizosphereEIIRALIDGLIDSGIDVTATGSEADLRARVARRLGSPYR*
Ga0111538_1297519933300009156Populus RhizosphereIRALIDGLIDSGMDIIGAESERDLRGRVARRLGPSYR*
Ga0075423_1054857913300009162Populus RhizosphereKVLNRAEIIRALIDGLLDSGMDVSGSASEADLRARVARRLGTPYR*
Ga0075423_1116812333300009162Populus RhizosphereLIDGLIDSGMDITGSESERDLRGRVARRLGTPYR*
Ga0075423_1227482513300009162Populus RhizosphereKTGKVLNRAEIIRALIDGLIDSGMDITASASESDLRARVARRLGSPYR*
Ga0075423_1312341813300009162Populus RhizosphereALIDGLIDSGMDITAAGSEADLRARIARRLGSPYR*
Ga0105249_1262905223300009553Switchgrass RhizosphereAEIIRALIDGLIESGMDITASGSEADLRARVARRLGTPFR*
Ga0105249_1332807833300009553Switchgrass RhizosphereIKGGKLLNRAEIIRALIDGLIDSGMDISGTTSERELRTRVARRLATPYR*
Ga0105854_123211413300009660Permafrost SoilIIRALIDGLIDSGMDVTGTASEADLRARVARRLGSPFR*
Ga0134066_1006833523300010364Grasslands SoilVAARRKDGRSLNRAEVIRALIDGLIDSGMDITAAGSEADLRARVARRLAAPSR*
Ga0134125_1193123813300010371Terrestrial SoilLIDGLLDSGMDVTASQSEADLRGRISRRLGTPFR*
Ga0105239_1293928013300010375Corn RhizosphereGKILNRAEIIRALIDGLLDSGMDVTTIASEADLHARVARRLGSPFR*
Ga0126381_10021549313300010376Tropical Forest SoilRAEIIRALIDGLIDSGMDIATSASEADLRARVARRLGTPFR*
Ga0134124_1018194113300010397Terrestrial SoilEIIRALIDGLLDSGMDITGSASEADLRARVARRLGSPYR*
Ga0134127_1074794613300010399Terrestrial SoilIRGLIDGLIESGMDITSTASEADLRGRVARRLGSPYR*
Ga0134127_1255754113300010399Terrestrial SoilRALIDGLIDSGMDISATLSEADLRARVVRRLGSPYR*
Ga0134121_1070125613300010401Terrestrial SoilIIRALIDGLIDSRMDVTAVSSEGDLRARVARRLGSPYR*
Ga0134121_1197697013300010401Terrestrial SoilKSVGRPLNRAEIIRALIDALIESGIDIDSVTSEADLRARVARRLATPFR*
Ga0134121_1272943413300010401Terrestrial SoilALIDGLIDSGMDITGTGSEGDLRARVARRLGSPFR*
Ga0137391_1063243833300011270Vadose Zone SoilALIDGLIDSGMDITGTASESDLRGRVARRLGSPFR*
Ga0137391_1112943913300011270Vadose Zone SoilNRAEIIRALIDGLIDSGMDVTSTASEADLRGRLARRLGSPYR*
Ga0137375_1012261313300012360Vadose Zone SoilIIRALIDGLLDSGMDVTASASEADLRARVARRLGSQYR*
Ga0150984_11535024513300012469Avena Fatua RhizosphereSLNRAEIIRALIDALIDSGMDITAVGSEADLRARVARRLGTPYR*
Ga0150984_11710927833300012469Avena Fatua RhizosphereIRALIDGLIDSGMDITAAGSEADLRARVARRLGSSR*
Ga0137419_1000756413300012925Vadose Zone SoilEIIRALIDGLIDSGMDVTAAGSEADLRARVARRLGSPYR*
Ga0137404_1156585613300012929Vadose Zone SoilKTMNRAEIIRALIDGLIESGMDVAAAGSEADLRARVARRLGTPYR*
Ga0137407_1244230423300012930Vadose Zone SoilRALVDALIESGMDVTPAGSESDLRGRIARRLGTPYR*
Ga0137410_1207155313300012944Vadose Zone SoilIRALIDGLIESGMDVAAAGSEADLRARVARRLGTPYR*
Ga0164303_1156385013300012957SoilLNRAEIIRALIDALIDSGMDITAIASEADLRARVARRLGTPYR*
Ga0164302_1155006713300012961SoilALIDGLIDSGMDIIGAESERDLRGRVARRLGPSYR*
Ga0134077_1019749533300012972Grasslands SoilAEIIRALIDGLIDSGLDITATDSEADLRARVARRLGPLYR*
Ga0157378_1204728413300013297Miscanthus RhizosphereIIRALIDGLLDSGMDIAGSASEADLRSRVARRLGSPYR*
Ga0163162_1022363013300013306Switchgrass RhizosphereRAEIIRALIDGLLDSGMDITGSASEADLRARVARRLGSPYR*
Ga0132256_10090080913300015372Arabidopsis RhizosphereLNRAEIIRALIDGLLDSGMDITGSASEADLRSRVARRLGSPYR*
Ga0132257_10064769813300015373Arabidopsis RhizosphereIIRALIDALIDSGMDVAASASEADLRSRVARRLGTQLR*
Ga0132257_10398204913300015373Arabidopsis RhizosphereLIDGLIDSGMDVRTTGSEADLRAKVARRLGTPYR*
Ga0132255_10378825733300015374Arabidopsis RhizosphereISGKILNRAEIIRALIDGLIDSGMDVRTTGSEADLRAKVARRLGTPYR*
Ga0182035_1180944123300016341SoilRAEIIRALIDGLIDSGMDISTAGSEADLRARVARRLGTPYR
Ga0187777_1002126853300017974Tropical PeatlandRGHSGRILNRAELIRALIDGFIDSGMDITGAASEADMRARVARRLGSPFR
Ga0184608_1026489723300018028Groundwater SedimentIRALIDGLIDSGMDVTGSGSEADLRARVARRLGTSFR
Ga0184609_1050655113300018076Groundwater SedimentKVLNRAEIIRALIDGLIDSGMDITGTGSEGDLRARVARRLGSPFR
Ga0184612_1031406313300018078Groundwater SedimentKVLNRAEIIRALIDGLFDSGMDVTGAASEADLRARVARRLGTPYR
Ga0066655_1005881333300018431Grasslands SoilNRAEIIRALIDGLIDSGMDITTSATEADLRARVARRLGTPYR
Ga0190271_1001121743300018481SoilMRGRNGKVMNRAEIIRALIDGLIDSGMDITSSGSEADLRAKVARHLGTPFR
Ga0210378_1015504813300021073Groundwater SedimentIKRAELIRALIDALVDSGLDLTAAGSEAALKALLSARLGGT
Ga0210382_1009376833300021080Groundwater SedimentKVVNRAEIIRALIDGLIESGMDITGSGSEADLRARVARRLGTPFR
Ga0193706_111092433300021339SoilTDIRGKSGKVINRAEIIRALIDGFIDSGLDVTGSESERDLRARLARRLGKAVR
Ga0207666_100840323300025271Corn, Switchgrass And Miscanthus RhizosphereVLNRAEIIRALIDGLIDSGMDITAAATEADLRARIARRLGSPYR
Ga0207697_1022149323300025315Corn, Switchgrass And Miscanthus RhizosphereIRALIDALIESGMDIAAVSSEADLRARVARRLATPFR
Ga0207682_1034028913300025893Miscanthus RhizosphereIRALIDVLIDSGMDITAAASESDLRARVARRLGSPYR
Ga0207643_1027004933300025908Miscanthus RhizosphereMNRAEIIRALIDGLIESGMDVAGTGSEADLRARVARRLGTPYR
Ga0207684_1035623123300025910Corn, Switchgrass And Miscanthus RhizosphereALIDGLIDSGMDVMASGSEADLRAKVARRLGTHYR
Ga0207660_1075935723300025917Corn RhizosphereRAEIIRALIDGLIDSGMDITGAASESDLRTRVARRLGSPFR
Ga0207687_1185370413300025927Miscanthus RhizosphereLNRAEIIRGLIDGLIDSGMDITGAGSEADLRARIARRLGSPLR
Ga0207706_1004879433300025933Corn RhizosphereMLNRAEIIRALIDGLLDSGMDITGSASEADLRARVARRLGSPYR
Ga0207706_1146237923300025933Corn RhizosphereGKVLNRAEIIRALIDGLIDSGMDVTAADSEADLRALLGRRLGSPHR
Ga0207686_1100781323300025934Miscanthus RhizosphereLDDYGNSRLKSNGRSLNRAEIIRALIDALIESGIDIAAITSEADLRARVARRLATPFR
Ga0207704_1088328813300025938Miscanthus RhizosphereRALIDGLIDSGMDVTATASEADLRARVARRLGTPYR
Ga0207711_1196164823300025941Switchgrass RhizosphereAEIIRALIDGLIDSGMDVTATVSEADLRARVARRLGTPYR
Ga0207712_1125022313300025961Switchgrass RhizosphereLNRAEIIRALIDGLIDSGMDITAAATEADLRARIARRLGSPYR
Ga0207677_1067939613300026023Miscanthus RhizosphereIIRALIDGLIESGMDVAGTGSEADLRARVARRLGTPYR
Ga0207698_1183891823300026142Corn RhizosphereLNRAEIIRALIDALIESGIDIDSVTSEADLRARVARRLATPFR
Ga0209847_109276023300026276Permafrost SoilGKAMNRAEIIRALIDGFIESGMDVAGAGSEADLRARVARRLGTP
Ga0209579_1048388313300027869Surface SoilRADTIRALIDGLLDSGMDISGTISEADLRARVARRLGSPYR
Ga0268264_1012157923300028381Switchgrass RhizosphereMRSRNGKAMNRAEIIRALIDGLIESGMDVVAAGSEANLRARVARRLGTPYR
Ga0307497_1060860213300031226SoilGRPLNRAEIIRALIDALIESGMDVAAVTSEADLRARVARRLATPFR
Ga0170824_11850413013300031231Forest SoilMRNKHGKAMNRAEIIRALIDGLIESGMDIAGAGSEANLRARVARRLGTPYR
Ga0310887_1026066123300031547SoilAEIIRALIDGLIDSGMDITSTATEADLRAKVARHLGTPFR
Ga0310886_1050172613300031562SoilRALIDGLIDSGMDITAAATEADLRARIARRLGSPYR
Ga0307405_1170082723300031731RhizosphereSGKLLNRAEIIRALIDGLLDSGMDITSSATEADLRAKVARHLGTPFR
Ga0306919_1057072713300031879SoilVNRTRSGKFLNRAEIIRALIDGLIDSGMDISTAGSEADLRARVARRLGTPYR
Ga0306921_1224823313300031912SoilTRNGKAMNRAEIIRALIDGLIESGMDVIGAGSEANLRARVARRLGTPYR
Ga0308174_1038749113300031939SoilAHLDGNDRSKSTGRPLNRAEIIRALIDALIESGIDIAAISSEADLRARVARRLATPFR
Ga0310885_1017428823300031943SoilGKSGKVLNRAEIIRALIDGLIDSGIDVGATPSEADLRAKVARHLGTPFR
Ga0310903_1049006523300032000SoilRSGKVLNRAEIIRALIDGLIDSGMDITSTATEADLRAKVARHLGTPFR
Ga0310906_1057544513300032013SoilALIDGLIDSGMDIIGAESERDLRGRVARRLGPSYR
Ga0318510_1016340223300032064SoilLNRAEVIRALIDGLIDSGMDITSSPSEADLRARVARRLGTPFR
Ga0310890_1141771013300032075SoilAEIIRSLIDGLIDSGMDVTGSGSESDLRARVARRLGTPFR
Ga0318525_1046762713300032089SoilVNRARSGKFLNRAEIIRALIDGLIDSGMDISTAGSEADLRARVARRLGTPYR
Ga0310896_1018120913300032211SoilRAITRAEIIRSLIDGLIDSGMDVTGSGSESDLRARVARRLGTPFR
Ga0335082_1004684413300032782SoilLGDHNGAPRQGRSLNRAEIIRALIDGLIDSGMDVTTSGTEADLRARVARRLGTPFR
Ga0372943_0697360_547_6693300034268SoilAEIIRALIDGFIESGMDITASGSEADLRARVARRLGTAIR
Ga0373958_0223968_5_1393300034819Rhizosphere SoilVLNRAEIIRALIDGLLDSGMDITGSASEADLRARVARRLGSPYR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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