Metagenome / Metatranscriptome Family F035432

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F035432
Family Type	Metagenome / Metatranscriptome
Number of Sequences	172
Average Sequence Length	48 residues
Representative Sequence	MTPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLAFGEIKPHSGS
Number of Associated Samples	109
Number of Associated Scaffolds	172

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.12 %
% of genes near scaffold ends (potentially truncated)	88.37 %
% of genes from short scaffolds (< 2000 bps)	91.86 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.814 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.512 % of family members)
Environment Ontology (ENVO)	Unclassified (29.651 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.977 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 22.97% Coil/Unstructured: 77.03%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 172 Family Scaffolds
PF00216	Bac_DNA_binding	27.91
PF00076	RRM_1	3.49
PF00069	Pkinase	1.74
PF00795	CN_hydrolase	1.16
PF13847	Methyltransf_31	1.16
PF05721	PhyH	1.16
PF01936	NYN	1.16
PF03328	HpcH_HpaI	1.16
PF01068	DNA_ligase_A_M	1.16
PF13924	Lipocalin_5	1.16
PF00072	Response_reg	0.58
PF00501	AMP-binding	0.58
PF00583	Acetyltransf_1	0.58
PF15590	Imm27	0.58
PF03050	DDE_Tnp_IS66	0.58
PF13565	HTH_32	0.58
PF04229	GrpB	0.58
PF02371	Transposase_20	0.58
PF01842	ACT	0.58
PF01832	Glucosaminidase	0.58
PF02586	SRAP	0.58
PF02457	DAC	0.58
PF02776	TPP_enzyme_N	0.58
PF01695	IstB_IS21	0.58
PF07690	MFS_1	0.58
PF05685	Uma2	0.58
PF04002	RadC	0.58

COG ID	Name	Functional Category	% Frequency in 172 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	27.91
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	6.98
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	1.16
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.16
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	1.16
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.16
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	1.16
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	1.16
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.16
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.58
COG2003	DNA repair protein RadC, contains a helix-hairpin-helix DNA-binding motif	Replication, recombination and repair [L]	0.58
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.58
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	0.58
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.58
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.58
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.81 %
Unclassified	root	N/A	44.19 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.81 %
Unclassified	root	N/A	44.19 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.81 %
Unclassified	root	N/A	44.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.19 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	6.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.33 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.19 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.58 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.58 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.19 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.16 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.16 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.16 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.74 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.58 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.19 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.16 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.16 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.16 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.16 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.58 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.58 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.19 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.16 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.16 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.16 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.58 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.58 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.58 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.19 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	1.16 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.16 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.16 %
Desulfotignum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfotignum	0.58 %
Methylobacterium durans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium durans	0.58 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.58 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.19 %
Bradyrhizobium centrolobii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	1.16 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.16 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.16 %
Desulfotignum balticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfotignum → Desulfotignum balticum	0.58 %
Methylobacterium durans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium durans	0.58 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.58 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.58 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16563225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → Methylobacterium durans	1697	Open in IMG/M
2170459009\|GA8DASG01DJ24D	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1009704	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1006486	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300001545\|JGI12630J15595_10067448	Not Available	705	Open in IMG/M
3300001661\|JGI12053J15887_10213998	Not Available	973	Open in IMG/M
3300001867\|JGI12627J18819_10181214	Not Available	853	Open in IMG/M
3300002245\|JGIcombinedJ26739_100090053	All Organisms → cellular organisms → Bacteria	2862	Open in IMG/M
3300002245\|JGIcombinedJ26739_100992648	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300002906\|JGI25614J43888_10014642	All Organisms → cellular organisms → Bacteria	2523	Open in IMG/M
3300002906\|JGI25614J43888_10069210	Not Available	1006	Open in IMG/M
3300002910\|JGI25615J43890_1101811	Not Available	513	Open in IMG/M
3300002917\|JGI25616J43925_10111121	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300002917\|JGI25616J43925_10367347	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005435\|Ga0070714_101463734	Not Available	667	Open in IMG/M
3300005435\|Ga0070714_102124849	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005436\|Ga0070713_101005049	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300005440\|Ga0070705_101086279	Not Available	654	Open in IMG/M
3300005445\|Ga0070708_100270382	All Organisms → cellular organisms → Bacteria	1598	Open in IMG/M
3300005468\|Ga0070707_102091802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	534	Open in IMG/M
3300005518\|Ga0070699_101049119	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300005518\|Ga0070699_101811624	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005536\|Ga0070697_101215884	Not Available	672	Open in IMG/M
3300005542\|Ga0070732_11041034	Not Available	501	Open in IMG/M
3300005610\|Ga0070763_10582481	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300005921\|Ga0070766_10306804	Not Available	1021	Open in IMG/M
3300006028\|Ga0070717_11069557	Not Available	735	Open in IMG/M
3300006028\|Ga0070717_11255828	Not Available	674	Open in IMG/M
3300006173\|Ga0070716_100556919	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300006175\|Ga0070712_101329052	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300006176\|Ga0070765_101474112	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	641	Open in IMG/M
3300006176\|Ga0070765_101501677	Not Available	634	Open in IMG/M
3300009824\|Ga0116219_10540933	Not Available	643	Open in IMG/M
3300010043\|Ga0126380_10623080	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	854	Open in IMG/M
3300010047\|Ga0126382_10945223	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300010048\|Ga0126373_10129107	Not Available	2376	Open in IMG/M
3300010048\|Ga0126373_12252882	Not Available	606	Open in IMG/M
3300010361\|Ga0126378_12856999	Not Available	551	Open in IMG/M
3300010376\|Ga0126381_100096830	All Organisms → cellular organisms → Bacteria	3756	Open in IMG/M
3300010376\|Ga0126381_100336340	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	2082	Open in IMG/M
3300010376\|Ga0126381_100601100	Not Available	1565	Open in IMG/M
3300010376\|Ga0126381_103146079	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	653	Open in IMG/M
3300010376\|Ga0126381_104429069	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300010376\|Ga0126381_105002022	Not Available	508	Open in IMG/M
3300012181\|Ga0153922_1154047	Not Available	539	Open in IMG/M
3300012200\|Ga0137382_10457072	Not Available	904	Open in IMG/M
3300012202\|Ga0137363_10909955	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300012203\|Ga0137399_10637436	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300012205\|Ga0137362_11732997	Not Available	512	Open in IMG/M
3300012927\|Ga0137416_11633965	Not Available	587	Open in IMG/M
3300012955\|Ga0164298_11350436	Not Available	548	Open in IMG/M
3300016270\|Ga0182036_10233949	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300016270\|Ga0182036_11433176	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300016294\|Ga0182041_10216624	Not Available	1536	Open in IMG/M
3300016319\|Ga0182033_10616312	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300016319\|Ga0182033_11457370	Not Available	617	Open in IMG/M
3300016341\|Ga0182035_10356113	Not Available	1218	Open in IMG/M
3300016341\|Ga0182035_11538173	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300016341\|Ga0182035_11821979	Not Available	551	Open in IMG/M
3300016357\|Ga0182032_11066984	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300016357\|Ga0182032_11960357	Not Available	513	Open in IMG/M
3300016371\|Ga0182034_11034857	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300016387\|Ga0182040_10386733	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300016404\|Ga0182037_10059197	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2599	Open in IMG/M
3300016404\|Ga0182037_10903853	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300016422\|Ga0182039_12202696	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300016445\|Ga0182038_11471518	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300016445\|Ga0182038_11478458	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300017966\|Ga0187776_10784875	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300020580\|Ga0210403_10447464	Not Available	1052	Open in IMG/M
3300021168\|Ga0210406_10124104	Not Available	2181	Open in IMG/M
3300021168\|Ga0210406_10206792	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M
3300021168\|Ga0210406_10410028	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300021170\|Ga0210400_11496004	Not Available	535	Open in IMG/M
3300021171\|Ga0210405_10143440	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300021171\|Ga0210405_11021467	Not Available	622	Open in IMG/M
3300021171\|Ga0210405_11034154	Not Available	617	Open in IMG/M
3300021171\|Ga0210405_11211059	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300021178\|Ga0210408_10432348	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300021358\|Ga0213873_10033969	Not Available	1283	Open in IMG/M
3300021361\|Ga0213872_10304040	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300021361\|Ga0213872_10411670	Not Available	547	Open in IMG/M
3300021372\|Ga0213877_10214518	Not Available	629	Open in IMG/M
3300021372\|Ga0213877_10265461	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300021403\|Ga0210397_10933203	Not Available	672	Open in IMG/M
3300021432\|Ga0210384_10171714	All Organisms → cellular organisms → Bacteria	1948	Open in IMG/M
3300021441\|Ga0213871_10250531	Not Available	562	Open in IMG/M
3300021474\|Ga0210390_10225757	Not Available	1585	Open in IMG/M
3300021474\|Ga0210390_10367046	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300021475\|Ga0210392_10718272	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300021559\|Ga0210409_10766032	Not Available	837	Open in IMG/M
3300021560\|Ga0126371_10709074	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1154	Open in IMG/M
3300021560\|Ga0126371_12882501	Not Available	583	Open in IMG/M
3300021560\|Ga0126371_13429672	Not Available	535	Open in IMG/M
3300021953\|Ga0213880_10115118	Not Available	713	Open in IMG/M
3300022522\|Ga0242659_1115094	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300025906\|Ga0207699_11145601	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300025910\|Ga0207684_10395956	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1187	Open in IMG/M
3300025910\|Ga0207684_10579198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium centrolobii	959	Open in IMG/M
3300025910\|Ga0207684_11728063	Not Available	503	Open in IMG/M
3300025922\|Ga0207646_11593934	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300025928\|Ga0207700_10421612	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300025928\|Ga0207700_11701479	Not Available	556	Open in IMG/M
3300025939\|Ga0207665_10529476	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300025939\|Ga0207665_10884102	Not Available	708	Open in IMG/M
3300026355\|Ga0257149_1011362	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300026490\|Ga0257153_1039613	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300026557\|Ga0179587_10290482	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300027065\|Ga0208489_1000017	All Organisms → cellular organisms → Bacteria	4204	Open in IMG/M
3300027371\|Ga0209418_1006539	Not Available	1702	Open in IMG/M
3300027371\|Ga0209418_1047437	Not Available	761	Open in IMG/M
3300027371\|Ga0209418_1053965	Not Available	715	Open in IMG/M
3300027376\|Ga0209004_1017406	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300027537\|Ga0209419_1062165	Not Available	731	Open in IMG/M
3300027603\|Ga0209331_1014698	Not Available	2032	Open in IMG/M
3300027609\|Ga0209221_1007582	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2777	Open in IMG/M
3300027903\|Ga0209488_10274422	Not Available	1262	Open in IMG/M
3300028047\|Ga0209526_10010707	All Organisms → cellular organisms → Bacteria	6319	Open in IMG/M
3300028047\|Ga0209526_10688254	Not Available	645	Open in IMG/M
3300030991\|Ga0073994_10050184	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300031057\|Ga0170834_104162279	Not Available	558	Open in IMG/M
3300031128\|Ga0170823_13301599	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300031446\|Ga0170820_15607245	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300031474\|Ga0170818_107178035	Not Available	568	Open in IMG/M
3300031545\|Ga0318541_10875441	Not Available	501	Open in IMG/M
3300031715\|Ga0307476_10845919	Not Available	676	Open in IMG/M
3300031715\|Ga0307476_11427494	Not Available	503	Open in IMG/M
3300031719\|Ga0306917_10381239	Not Available	1099	Open in IMG/M
3300031744\|Ga0306918_10605489	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300031744\|Ga0306918_11155722	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300031744\|Ga0306918_11319927	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300031744\|Ga0306918_11386556	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300031753\|Ga0307477_10786580	Not Available	633	Open in IMG/M
3300031754\|Ga0307475_10107136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	2188	Open in IMG/M
3300031754\|Ga0307475_10250644	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300031754\|Ga0307475_10480623	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300031754\|Ga0307475_10848165	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfotignum → Desulfotignum balticum	723	Open in IMG/M
3300031795\|Ga0318557_10253919	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300031823\|Ga0307478_10898508	Not Available	741	Open in IMG/M
3300031833\|Ga0310917_11169914	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300031890\|Ga0306925_10306074	All Organisms → cellular organisms → Bacteria	1709	Open in IMG/M
3300031890\|Ga0306925_10654819	Not Available	1104	Open in IMG/M
3300031890\|Ga0306925_11492498	Not Available	662	Open in IMG/M
3300031890\|Ga0306925_11601118	Not Available	633	Open in IMG/M
3300031912\|Ga0306921_11108800	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300031912\|Ga0306921_12319734	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300031942\|Ga0310916_10357165	Not Available	1241	Open in IMG/M
3300031942\|Ga0310916_11413289	Not Available	569	Open in IMG/M
3300031946\|Ga0310910_10166360	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300031947\|Ga0310909_10155282	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1884	Open in IMG/M
3300031954\|Ga0306926_10523575	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1455	Open in IMG/M
3300031954\|Ga0306926_11187102	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300031954\|Ga0306926_12728276	Not Available	536	Open in IMG/M
3300031959\|Ga0318530_10326233	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300031962\|Ga0307479_10401538	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300031962\|Ga0307479_10604525	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300031962\|Ga0307479_10663173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1023	Open in IMG/M
3300031962\|Ga0307479_10689411	Not Available	1001	Open in IMG/M
3300031962\|Ga0307479_10824778	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300032001\|Ga0306922_11900217	Not Available	583	Open in IMG/M
3300032035\|Ga0310911_10321910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	891	Open in IMG/M
3300032035\|Ga0310911_10801579	Not Available	544	Open in IMG/M
3300032261\|Ga0306920_104200265	Not Available	519	Open in IMG/M
3300032955\|Ga0335076_10143931	All Organisms → cellular organisms → Bacteria	2301	Open in IMG/M
3300032955\|Ga0335076_11627936	Not Available	534	Open in IMG/M
3300033289\|Ga0310914_10227174	Not Available	1672	Open in IMG/M
3300033289\|Ga0310914_10488620	Not Available	1114	Open in IMG/M
3300033289\|Ga0310914_10810955	Not Available	834	Open in IMG/M
3300033289\|Ga0310914_11116709	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300033289\|Ga0310914_11346365	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300033289\|Ga0310914_11387284	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300033289\|Ga0310914_11604530	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.09%
Host-Associated	Host-Associated	2.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.09%
Plants	Host-Associated → Plants	2.33%
Fungi	Host-Associated → Fungi	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.33%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.58%
Mycelium	Host-Associated → Fungi → Mycelium	0.58%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.93%
Loam	Environmental → Terrestrial → Soil → Loam	23.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.33%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.74%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.58%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	51.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.05%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.74%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.58%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.14%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.56%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.49%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.91%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	1.16%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.58%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.58%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.58%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.58%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.58%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.58%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.58%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027065	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF006 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00353930	2088090014	Soil	MKPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTFAFGEIKPHSGSFKDGPAEDKPPHFLLSR
F47_08140720	2170459009	Grass Soil	MTPILAKVTAIEKRDDRYQVIVQISPKYRGSFNTLAFGEIKPHSGSLKDSGL
AP72_2010_repI_A01DRAFT_10097044	3300000579	Forest Soil	MTSLPAQVIAIEKRGDEYQVVVQIXTKYRGSFNTLAFGEIKPYSDSQQDIVAEAST*
AP72_2010_repI_A001DRAFT_10064864	3300000893	Forest Soil	MTSLAAQVLAIEKRGDEYQVVVQISTKYRGSFNTLAFGEIKPYSDSQQDIVAEAST*
JGI12630J15595_100674482	3300001545	Forest Soil	MTPILAKVTAFEKRGDQYQVIVQISPKYRGSFNTLAFGEI
JGI12053J15887_102139981	3300001661	Forest Soil	MSPIAAKVTSIENRGDQYQVIIQINSKYRGSFSTLAF
JGI12627J18819_101812142	3300001867	Forest Soil	MTSLPAKVIAIERRGDQYFQAIIQIGPRYRGSFNTLAFGD
JGIcombinedJ26739_1000900536	3300002245	Forest Soil	MTPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLA
JGIcombinedJ26739_1009926481	3300002245	Forest Soil	MTPILAKVTAIEKRGDRYQVIVQISPKYRGSFNTLAFGEIKPHSGSLKDGRLD
JGI25614J43888_100146421	3300002906	Grasslands Soil	MTAILAKVTAFEKRGDQYQVIVQISPKYRGSFNTLAFGEIKPHS
JGI25614J43888_100692102	3300002906	Grasslands Soil	MTSLSAQVMAIEERGDQYQVVVQISTKYRGSFNTLVFGEIKPYSGSLKDGRLDLVYY
JGI25615J43890_11018111	3300002910	Grasslands Soil	MTSLPAQVMAIEERADQYQVVVQISTKYRGSFNTLVFGEIKP
JGI25616J43925_101111211	3300002917	Grasslands Soil	MTPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLAFGEIKPHSGS
JGI25616J43925_103673472	3300002917	Grasslands Soil	TLPIMTPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLAFGRDQT*
Ga0070714_1014637341	3300005435	Agricultural Soil	VVAMEERACQYQVVVQIAKKYRGSFNTLAFGEIKPYTGSLKDGRLNLVYYLDRA*
Ga0070714_1021248492	3300005435	Agricultural Soil	MTSLPAKVIAIEKQGDQYHVIVQISTKYRGSFNTLAFGEIKPYSG
Ga0070713_1010050491	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLAFGEIKPHSGSFKDGRLDLV
Ga0070705_1010862791	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTPLPAKVTAIGKQGQQYRAVVQIRSKYRGSVTTLVFGELKPHT
Ga0070708_1002703823	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VLPQMTSLPAKVIAIEKRGDQYQVIVQISTKYRGSFNTLPFGEIKPYRGEWR*
Ga0070707_1020918021	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLAFGEIKPHSGSLKDGRLDLVYYQN
Ga0070699_1010491192	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSIMTPLPAKVTIIEKRGTQYQVIVEISPKYRGSFNTLVFGEIKPHSGSLQDGRLNLVYY
Ga0070699_1018116243	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTPILAKVTAIEKRGDRYQVIVQVTPKYRGSFNTFAFGETKPHSGPVK
Ga0070697_1012158843	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTPILAKVTEIEKRGDQYQVIVQIGPKYRGSFNTLAFGEIKPHSGS
Ga0070732_110410341	3300005542	Surface Soil	MTPILAKVTAIEKRGAQYQVIVQINPKYRGSFNTLAFGEIKPHSGSLKDGRLATIKTPAR
Ga0070763_105824811	3300005610	Soil	MTSLSAKVIAIEKRGDHYQVIVQISTKYSGSFNTLAFGEIKPYSGSLKDGRLDLVYYRD
Ga0070766_103068043	3300005921	Soil	MTSLPAKVIAIEKQGDQYHVIVQISTKYRLVNTLAFGEIKPYSGSLKDG
Ga0070717_110695573	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VLPQMTSLPAKVIAIEKRGDQYQVIVQISTKYRGSFNTLPFGEIKPYRG*
Ga0070717_112558283	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTPILAKVTAIEKRGNLYQVIVQIGPKYRGSFNTLAFGEIKPHSGS
Ga0070716_1005569193	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MLVMTPLPAKVTVIEKRGTQYQVIVQISPKYRGSF
Ga0070712_1013290522	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTSLAAKVIAIEKRGGQYQVIVQISTRYRGSFNTLAF
Ga0070765_1014741122	3300006176	Soil	MTSLLAKVIAIEKRGDQYVIVQISTKYRGSFNTLAFG
Ga0070765_1015016771	3300006176	Soil	MKCRLQMTPLPAKVIAIEKGGDQYQVIVQISTKYRGSFNTLAFGEIKP
Ga0116219_105409331	3300009824	Peatlands Soil	MTSILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLAFGEIK
Ga0126380_106230803	3300010043	Tropical Forest Soil	MTSLPAKVIAIEKRGDQYQVIVQIGTKYRGSFNTLAFGEIKPYTGALKDGRLD
Ga0126382_109452231	3300010047	Tropical Forest Soil	MSPIAANVTSIEKRGDQYQVIVQISPKYRGSFNTLAFGAIKPQSGSLRDG
Ga0126373_101291073	3300010048	Tropical Forest Soil	MTSFPAKVIAIEKIGSQYQIVVQINTRYRGSFKTLAFGEIKPYCGSVKDGRLRV*
Ga0126373_122528821	3300010048	Tropical Forest Soil	MSPIAAKVTSIEKRGDQYQVIVQISPKYRGSFNTLAFGEIKP
Ga0126378_128569991	3300010361	Tropical Forest Soil	MTLLPAKVTAIEKRGIQYQVVVQIGTPKYKGSFNTLVFGEMKPHSGSLKDGRLDLVYIKIPVSA*
Ga0126381_1000968304	3300010376	Tropical Forest Soil	MTLLPAKVTAIEKRGIQYQVVVQIGTPKYRGSFNTLVFGEIKPHSGSLKDGRLDLVRKYDRE*
Ga0126381_1003363403	3300010376	Tropical Forest Soil	MSSLPAKVIAIEKRGHQYQVIVQIGTKYRGSFNTLAFGEIKPYSGSLKDGRLDL
Ga0126381_1006011001	3300010376	Tropical Forest Soil	MSSIPAKVVAMEERACQYQVVVQITNKYRGSFNTLLFGEIKPYIGS
Ga0126381_1031460792	3300010376	Tropical Forest Soil	MTSFPAKVIAIEKIGSQYQIVVQINTRYRGSFKTLAFGEIKPYC
Ga0126381_1044290691	3300010376	Tropical Forest Soil	MSPIAAKVMAIERRGEQYQVIVQISPKYRGSFNTLAFGEIKPHSGS
Ga0126381_1050020222	3300010376	Tropical Forest Soil	MSSIPAKVVAMEERACQYQVVVQITNKYRGSFNTLAFGEIKPYSGSLR
Ga0153922_11540471	3300012181	Attine Ant Fungus Gardens	MTSLPVRVTAVEKRGDQCQVIVQVGTKYWGSFNTLAFGEIKPYIGSLK
Ga0137382_104570722	3300012200	Vadose Zone Soil	MTPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLAFGEIKPHSGSLKRPA*
Ga0137363_109099553	3300012202	Vadose Zone Soil	MKPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTFAFGE
Ga0137399_106374363	3300012203	Vadose Zone Soil	MTPILAKVTAIEKRGDQYQVIAQISLKYRGSFNTLAFGEIKPHSGSFKDGRLDLVYHK
Ga0137362_117329971	3300012205	Vadose Zone Soil	MTSLPAEVMAIEGRGDQYQVVVQITTKYRGSFNTLVFGE
Ga0137416_116339652	3300012927	Vadose Zone Soil	MTPILAKVTAIEKRGDQYQVIVQIGPKYRGSFNTLAFGEIKPHSGSFKDGRLDLVYHKD
Ga0164298_113504362	3300012955	Soil	MTPILAKVTAIEQRADQYQVIVQISPKYRGSFNTLAFGEIQTAQRFTER*
Ga0182036_102339491	3300016270	Soil	MRPIAAKVTAIEKRADRYQVVVQISPKYRGSFNTIAFGEIKPHSGSLQHGRLDL
Ga0182036_114331761	3300016270	Soil	MNPIAAKVMATERRGEQYQVIVQISPKYRGSFNTLAFGEIKPHSGSLRD
Ga0182041_102166243	3300016294	Soil	MTLLPAKVTAIEKRGIQYQVVVQIGTPKYKGSFNTLVFGEMK
Ga0182033_106163121	3300016319	Soil	MSPIAAKVTAIEKRSDRYQVVVQIIPKYRGSFNTLVFGERKPHSGSLQH
Ga0182033_114573701	3300016319	Soil	VHYLPAKVTAIEKRDDQYFQVIIRIGTKYRGSFNTLAFGEIKPYSGS
Ga0182035_103561134	3300016341	Soil	MTPLPAKVTAIEKRGIQYQVVVQIGTPKYKGSFNTLVFGEMKP
Ga0182035_115381732	3300016341	Soil	MNPIAAKITSIEKRGDQYQVIVQISPKYRGSFNTLAFGAIKPHSGSLRDGRLDLVYYQ
Ga0182035_118219791	3300016341	Soil	MSPIAAKVTSIEKRGNQYQVIVQISPKYRGSFNTLAFGE
Ga0182032_110669841	3300016357	Soil	MTSLPAQVIAIEKRGDQYQVVVQISTKYRGSFNTLAFGEIKPYSGSLKDGRLDLVYYRD
Ga0182032_119603571	3300016357	Soil	MSPIAAKVTAIERRVDRYQVIFQISPKYRGSFNTLAFGEIKPHSGSLR
Ga0182034_110348571	3300016371	Soil	MTSLPAQVIAIEKRGDQYQVIVQISSKYRGSFNTLAVGEIKPYIGSLKDGRLDL
Ga0182040_103867331	3300016387	Soil	MTALAAKVTAIERRGVQYQVVVQIGTPKYRGSFNTLV
Ga0182037_100591972	3300016404	Soil	MKPILAKVITIKKRGDQYQVIVQISPKYRGSFNTLTFGEIKPYSGSL
Ga0182037_109038531	3300016404	Soil	MRPIAAKVTSIEKRGDKYQVIVQISPKYRGSFNTLAFGEIKPHIGSLRD
Ga0182039_122026962	3300016422	Soil	MTPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLAFGEIKPHSGSLKDGRLDLVYYQTLALT
Ga0182038_114715182	3300016445	Soil	MNPIAAKVMATERRGEQYQVIVQISPKYRGSFNTLAFGEIKPHSGSLRDGRLDLVYYQ
Ga0182038_114784582	3300016445	Soil	MQPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLAFGA
Ga0187776_107848752	3300017966	Tropical Peatland	MTSLPAKVIAIEKRGDQYQVIVQISTKYRGSFNTLAFGEIKPYSGSLKDGRLDLIYLLSEPSPERR
Ga0210403_104474643	3300020580	Soil	MTPLPAKVTAIGKQGQQYRAVVQIKSKYCGSVTTLVFGELKPHTGFLKEGRLDLVYYQN
Ga0210406_101241041	3300021168	Soil	MTRLPAKVIAIEKPDDHYQAIGQISTKYRASFNTLAFGEIKPYSGSFKDGRLDLIYYR
Ga0210406_102067921	3300021168	Soil	MSSIPAKVVAMEERACQYQVVVQIAKKYRGSFNTLAFGEIKPYTGSLKDGRLNLVYYLDR
Ga0210406_104100281	3300021168	Soil	MTSLPAQVIAIENRGDQYQVIVQISARYRGSFNTLAFGEIKPYIGSLNDGRLDLV
Ga0210400_114960042	3300021170	Soil	MTPVLAKVTAVEKRGDQYQVIVQISRRYRGSFNTLIFG
Ga0210405_101434403	3300021171	Soil	MTSLPAKVIAIEKRGDQYQMIVQIGTRYRGSFNTLAFGEIKPYIGSLKDGRLDLVYYR
Ga0210405_110214671	3300021171	Soil	MTSLPAQVIAIEKRGDHYQVIVQISTKYRGSFNTLAFGEIKPYSGSLKD
Ga0210405_110341542	3300021171	Soil	MSPIAAKVTSIEKRGDQYQVIIQISPKYRGSFNTLAFGEIKPHSGSLRDGRL
Ga0210405_112110591	3300021171	Soil	MISLPAKVIAIEERGDQYQVIVQISTKYRGSFNTLAFGEIKPYSGSLKD
Ga0210408_104323481	3300021178	Soil	MTPILAKVTAIEKQGDQYQVIVQISPKYRGSFNTLAFGEIKPHSGSLKDGPRPG
Ga0213873_100339691	3300021358	Rhizosphere	MTSIPAKVVAMEERACQYQVVVQITNKYRGSFNTLLFGEIKPYIGSLKDGRL
Ga0213872_103040402	3300021361	Rhizosphere	MTSLPAKVIAIEKRGDQYQVIVQISTKYRGSFNTLAFGEIKPYSGSLKDGRLDLI
Ga0213872_104116701	3300021361	Rhizosphere	MTSLPAKVIAIEKRADQYQVMVQISTKYRGSFNTLAFGEIKPYSGSL
Ga0213877_102145182	3300021372	Bulk Soil	MTSIPAKVIAIEKRGDQYQVIVQINTRYRGSFNTLVFGEIKPYSGSL
Ga0213877_102654611	3300021372	Bulk Soil	MTSLPAKVIAIEKKDDQYQLVVQINTRYRGSFNTLAFGEIKPYSGSMKDGRLDLVYY
Ga0210397_109332032	3300021403	Soil	MSSIPAKVVAMEERACQYQVVVQIAKKYRGSFNTLAFG
Ga0210384_101717141	3300021432	Soil	MTLLPAKVTAIGKQGQQYRAVVQIMSKYQGSVTTLVFG
Ga0213871_102505311	3300021441	Rhizosphere	MSSIPAKVVAMEERACQYQVVVQITNKYRGSFNTLAFGDIKPYCGSLKGGRLDLVYY
Ga0210390_102257573	3300021474	Soil	MTPVLAKATAVEERGNQHQVIVQISRKYRGSFNTLIFGEIKPYTGSLNENRLDL
Ga0210390_103670461	3300021474	Soil	MTSLAAKVIAIEKRGGQYQVIVQISTRYRGSFNTLAFGDIKPYSGSLKDGRL
Ga0210392_107182722	3300021475	Soil	MTPILAKVAAIEKRGDQYQLIVQISPKYRGSFNTLAFGEIKPHSGSLKDGRLDLVYH
Ga0210409_107660321	3300021559	Soil	MTSLPAKVIAIEERGDQYQVIVQISTKYRGSFNTLAFGEIK
Ga0126371_107090743	3300021560	Tropical Forest Soil	MTSLPAKVIAIEKRGDQYQVIVQIGTRYRGSFNTLAFGEIKPYTGALKDGRLDL
Ga0126371_128825011	3300021560	Tropical Forest Soil	MSPIAAKVTAIEKRGDQYQVVVQISPKYRGSFNTLVFGERKPHSGSLQHGRLDLLYY
Ga0126371_134296721	3300021560	Tropical Forest Soil	MTSFPAKVIAIEKIGSQYQIVVQINTRYRGSFKTLAFGEIKPYCGSVKDGRLRV
Ga0213880_101151181	3300021953	Exposed Rock	MTTLPARVIAVEKRGDQHHVIVQIGAKYRGSFNTLAFGEIKPY
Ga0242659_11150942	3300022522	Soil	MTPILAKVTAIEKRGDQYQVIVQINPKYRGSFNTLAFGEIKPHSGSLKDGRLDLVYHQN
Ga0207699_111456012	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSIMTPLPAKVTIIEKRGTQYQVIVEISPKYRGSFNTLVFGEIKPHS
Ga0207684_103959562	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLAFGEIKPHSGSLKGG
Ga0207684_105791983	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLAFGEIK
Ga0207684_117280631	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTPVPAKVTAVEKRGDQYQIIVQISRKYRGSFNTLVFGDTK
Ga0207646_115939341	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLAFGEIKPHSGSLKDGR
Ga0207700_104216121	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLAFGEIKT
Ga0207700_117014791	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTPIPAKVTTIEKRGDQHHVIVQISTKYRGSFNTLA
Ga0207665_105294761	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLVMTPLPAKVTVIEKRGTQYQVIVQISPKYRGSFNTLAFGEIKPHSGSLKDGRLD
Ga0207665_108841021	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTPILAKVTVIEKRGDQYQVIVQIGPKYRGSFNTLAFGEIKPHSGSFKDGRLDLVYHKD
Ga0257149_10113622	3300026355	Soil	MTPILAKVTAIEKRGDRYQVIVQISPKYRGSFNTLAFGEIK
Ga0257153_10396133	3300026490	Soil	MTPILAKVTAIEKRGDQYQVIVQIGPKYRGSFNTLAFGEIKPHSGSFKDG
Ga0179587_102904823	3300026557	Vadose Zone Soil	MTPILAKVTAIEKRGDQYQVIVQIGPKYRGSFNTLAFGEIKPHSGSFKDGRLDLVYH
Ga0208489_10000171	3300027065	Forest Soil	MTPILAKVTAIEKRGDRYQVIVQVTPKYRGSFNTFAFGETKPHSGPF
Ga0209418_10065394	3300027371	Forest Soil	MTSLPASVVAIEKRGDQYQVIVQISTKYRGSFNTLAFGEINPYI
Ga0209418_10474372	3300027371	Forest Soil	MTPVLAKVTAVEKRGDQYQVIVEISQKYRGSFNPLIFGEIKPYTGSRKENR
Ga0209418_10539651	3300027371	Forest Soil	MTSLPAKVIAIEKRDDRCFQLIIQIGTRYQGSFNTLLFGEIKPYTGSLKDGRLDLA
Ga0209004_10174061	3300027376	Forest Soil	MTSLAANVIAIEKRADQYQVIVQISAKYRGSFNTLAFGEVKPYSGSLKDGRLD
Ga0209419_10621653	3300027537	Forest Soil	MTPILAKVTAFEKRGDQYQVIVQISPKYRGSFNTLAFGEIKPHSGSLKGGRLDLVYH
Ga0209331_10146983	3300027603	Forest Soil	MTPILAKVTAFEKRGDQYQVIVQISPKYRGSFNTLAFGEIKPHSG
Ga0209221_10075823	3300027609	Forest Soil	MSSIPAKVVAMEERACQYQVVVRIANKYRGSFNTLAFGEIKPYTGSLKDGG
Ga0209488_102744224	3300027903	Vadose Zone Soil	MTPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTI
Ga0209526_100107079	3300028047	Forest Soil	MTPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLAFGEIKPH
Ga0209526_106882541	3300028047	Forest Soil	MTPILAKVTAIERRGDQYQAIVQISTKYRGSFNTLAFGEIKPEW
Ga0073994_100501841	3300030991	Soil	MTPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLAFG
Ga0170834_1041622791	3300031057	Forest Soil	MTSLPAQVMAIEERGDQYQVVVQISTKYRGSFNTLVFGEIKPY
Ga0170823_133015991	3300031128	Forest Soil	MTLFPAKVIEIEKRGDQYQVIVQISSKYRGSFNTLALERSNRTSVLLR
Ga0170820_156072452	3300031446	Forest Soil	MTPIFAKVTAIEKRGDQYQVIIQISPKYRGSFNTVAFGEIKPHSGSLKDGR
Ga0170818_1071780351	3300031474	Forest Soil	MTPLPAKVTAIGKQGQQYRAVVKIRSKYRGSVTTLVFGDLKPHSGSLKDGRLDLVYHQ
Ga0318541_108754412	3300031545	Soil	MRPIAAKVTAIEKRADRYQVVVQISPKYRGSFNTIAFGEIKPHSGSLQHGRLDLV
Ga0307476_108459191	3300031715	Hardwood Forest Soil	MSSIPAKVVAMEGRACQYQVIVQITKRYRGSFNTLAFGEIKPYSGSLKDGRL
Ga0307476_114274942	3300031715	Hardwood Forest Soil	MTSISAKLVAIEKRDDQYQVIVQISTKYRGSFNMLAFGAIKPYIGFS
Ga0306917_103812392	3300031719	Soil	MSPIAAKVTSIEKRGDQYQVIVQISPKYRGSFNTL
Ga0306918_106054892	3300031744	Soil	MSPIAAKVTSIEKRGDQYQVIVQISPKYRGSFNTLAFGEIKPHIGSLR
Ga0306918_111557221	3300031744	Soil	MSPIAAKVTSIEKRGDQYQVIVQISPKYRGSLNTIAYGEIK
Ga0306918_113199271	3300031744	Soil	MTPLPAHVIAIEERGDQYQVIVQISTKYRGSFNTLAFGEIKPYIGSLKDRRLD
Ga0306918_113865562	3300031744	Soil	MTLLPAKVTAIEKRGIQYQVVVQIGTPKYKGSFNTLVFGEMKPHSGSLKDGPLDLK
Ga0307477_107865801	3300031753	Hardwood Forest Soil	MSSIPAKVVAMEERACQYQVVVQITNKYRGSFNTLAFGEIKPYCGSLKDGRLNL
Ga0307475_101071361	3300031754	Hardwood Forest Soil	MTPIPAEVVAAEKQGVHYQVIVQIGIPKYRGSFNMLVFGERKPYRGSLNDGRLELV
Ga0307475_102506444	3300031754	Hardwood Forest Soil	MTSLPAKVTAVEKRGDQYQVIVQISTKYRGSFNTLAFGEIKPYSGSLKDSRLDLTA
Ga0307475_104806233	3300031754	Hardwood Forest Soil	MTSLPAQVMAIEKRGDHYQVVVQISTKYRGSFNTLVFGEIKP
Ga0307475_108481652	3300031754	Hardwood Forest Soil	MTSLPAKVIAIEKRGDQYRVIVQIGTKYRGSFNTLASGEIEPHIG
Ga0318557_102539192	3300031795	Soil	MSPIAANVTSIEKRGDQYQVIVQISPKYRGSFNTLAFGAIKPHSGSLR
Ga0307478_108985081	3300031823	Hardwood Forest Soil	MTALPAKVIALEKPGDQYQVIVQISTKYRGSFNTLAFGEIKPYSGSLKDGRL
Ga0310917_111699141	3300031833	Soil	MTPLPAKVTAIEKRGIQYQVVVQIGTPKYKGSFNTLVFGEMKPH
Ga0306925_103060742	3300031890	Soil	LAKVITIEKRGDQYQVIVQISPKYRGSFNTLTFGEIKPYSGSL
Ga0306925_106548192	3300031890	Soil	MTSLPAKVIAVEQIGDQCHVVVQIAAKYRGSFNTLAFGEINPTAFP
Ga0306925_114924982	3300031890	Soil	MSPIAAKVMAIERRGEQYQVIVQISPKYRGSFNTLAFGEIKPHSGSLRD
Ga0306925_116011181	3300031890	Soil	MSPIAAKVTSIEKRGDQYQVIVQISPKYRGSFNTLAF
Ga0306921_111088001	3300031912	Soil	MTSLPAQVIAIEKRGDQYQVVVQISTKYRGSFNTLAFGE
Ga0306921_123197342	3300031912	Soil	MAIERRGEQYQVIVQISPKYRGSFNTLAFGEIKPHSGSLRDGRLDLVYYQNPGLSAED
Ga0310916_103571654	3300031942	Soil	MTPLPAKVTAIEKRGIQYQVVVQIGTPKYKGSFNTL
Ga0310916_114132891	3300031942	Soil	MSPIAAKVTSIEKRGDQYQVIVQISLKYRGSFNTLAFGEIKPHIGSLQH
Ga0310910_101663603	3300031946	Soil	MRPIAAKVTAIEKRADRYQVVVQISPKYRGSFNTIAF
Ga0310909_101552823	3300031947	Soil	PIITPILAKVITIKKRGDQYQVIVQISPKYRGSFNTLTFGEIKPYSGSL
Ga0306926_105235753	3300031954	Soil	MTPLPAKVTAIEKRGIQYQVVVQIGTPKYKGSFNT
Ga0306926_111871021	3300031954	Soil	MTPILAEVTGIEKRGDQYQGIVQISPKYRGSFNTLAFGEINP
Ga0306926_127282762	3300031954	Soil	MRPISAKVIAIEKRGLQYQVIVEIIPKYRGSFNTLVFGDIKPHIGSLKDGRLNLL
Ga0318530_103262331	3300031959	Soil	MSPIAAKVTSIEKRGDQYQVIVQISPKYRGSLNTIAFGEI
Ga0307479_104015383	3300031962	Hardwood Forest Soil	MTTILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLAFGEIKPHSGSLKD
Ga0307479_106045252	3300031962	Hardwood Forest Soil	MTSLPAKVIAIEKRGDQYQVIVQISTKYRGSFNTLAFGEIKPYSGSLKDGRLDLIYYRD
Ga0307479_106631731	3300031962	Hardwood Forest Soil	SLPAKVIAIEKRGDQYQVIVQISTKYRGSFNTLAFGEINPLHRLS
Ga0307479_106894113	3300031962	Hardwood Forest Soil	MTPLPAKVTAIGKQGQQYRAVVQIRSKYRGSVTTLVFGELKPHTGVLKG
Ga0307479_108247783	3300031962	Hardwood Forest Soil	MTPILAKVTAIEKRGDQYQVIVQISPKYRGSFNTLAFGEIKPHSGSLKD
Ga0306922_119002171	3300032001	Soil	MSPIAAKVTAIEKRGDQYQVIVQISLKYRGSFNTLAFGEIKPHSGSLKDGRLDLV
Ga0310911_103219101	3300032035	Soil	MTLLPAKVTAIEKRGIQYQVVVQIGTPKYKGSFNTLVFGEMKP
Ga0310911_108015791	3300032035	Soil	MTALAAKVTAIERRGVQYQVVVQIGTPKYRGSFNTLVFGEIKPH
Ga0306920_1042002651	3300032261	Soil	MSPVAAKVTAIERRVDQYQVIVQSSPKYRGSFNTLAFGEIKPHSGSLRDARLDLVY
Ga0335076_101439311	3300032955	Soil	MTSLPAKVIAIEKRGDQYQVIVQISTKYRGSFNTLVFGEIKPYSGS
Ga0335076_116279362	3300032955	Soil	MTSIPAKVIAIEKRGDQYQVIVQINARYRGSFNTLSFGEIKPY
Ga0310914_102271741	3300033289	Soil	MTPLPAKVTAIEKRGIQYQVVVQIGTPKYKGSFNTLVFGEMK
Ga0310914_104886203	3300033289	Soil	VIAVEQIGDQCHVVVQIAAKYRGSFNTLAFGEINPTAFP
Ga0310914_108109551	3300033289	Soil	MSPIHAKVTAIEKRGVQYQVVVEVIPKYRGSFNTLVFGEIKPHSGSIKDGRLN
Ga0310914_111167091	3300033289	Soil	MSPIAAKVTSIEKRGDQYQVIVQISPKYRGSLNTIAFGEIKPHSGS
Ga0310914_113463651	3300033289	Soil	MSPIAAKVTSIEKRGDQYQVIVQISPKYRGSFNTLAFGAIKPHSGSLRDGRLDLVYY
Ga0310914_113872842	3300033289	Soil	MNPIAAKVMATERRGEQYQVIVQISPKYRGSFNTLAFGEIKPHSGSLRDGRLDLVYYQN
Ga0310914_116045301	3300033289	Soil	MSPIAANVTSIEKRGDQYQVIVQISPKYRGSFNTLAFG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F035432

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences