Sample 3300031327

Basic Information
IMG/M Taxon OID	3300031327 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0134331 \| Gp0333265 \| Ga0315849
Sample Name	Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T20 (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	29422266
Sequencing Scaffolds	46
Novel Protein Genes	53
Associated Families	39

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	13
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	6
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus → unclassified Ourmiavirus → Erysiphe necator associated ourmia-like virus 88	3
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus	2
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	1
All Organisms → cellular organisms → Eukaryota	8
All Organisms → Viruses → Riboviria	5
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus → unclassified Ourmiavirus → Erysiphe necator associated ourmia-like virus 48	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	1
All Organisms → Viruses → Riboviria → Orthornavirae	1
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae	2
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae → Pleosporaceae → Alternaria → Alternaria sect. Alternaria	1

Ecosystem Assignment (GOLD)
Name	Plant Litter Microbial Communities From East Loma Ridge, Irvine, California
Type	Environmental
Taxonomy	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter → Plant Litter Microbial Communities From East Loma Ridge, Irvine, California

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	grassland biome → litter layer → plant litter
Earth Microbiome Project Ontology (EMPO)	Unclassified

Location Information
Location	USA: California
Coordinates	Lat. (^o)	33.7417	Long. (^o)	-117.7042	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F006377	Metagenome / Metatranscriptome	374	Y
F008406	Metatranscriptome	333	N
F009606	Metagenome / Metatranscriptome	315	Y
F010295	Metagenome / Metatranscriptome	305	Y
F013054	Metagenome / Metatranscriptome	274	Y
F015954	Metagenome / Metatranscriptome	250	Y
F018299	Metagenome / Metatranscriptome	235	Y
F018668	Metagenome / Metatranscriptome	233	Y
F021791	Metagenome / Metatranscriptome	217	Y
F023769	Metagenome / Metatranscriptome	208	Y
F025888	Metagenome / Metatranscriptome	199	N
F028052	Metatranscriptome	192	N
F028371	Metagenome / Metatranscriptome	191	Y
F030309	Metagenome / Metatranscriptome	185	N
F033276	Metatranscriptome	177	N
F042666	Metatranscriptome	157	N
F042678	Metagenome / Metatranscriptome	157	Y
F043722	Metagenome / Metatranscriptome	155	N
F044246	Metagenome / Metatranscriptome	154	N
F044843	Metagenome / Metatranscriptome	153	N
F045460	Metatranscriptome	152	N
F050038	Metatranscriptome	145	Y
F052301	Metagenome / Metatranscriptome	142	N
F068418	Metagenome / Metatranscriptome	124	Y
F069521	Metatranscriptome	123	N
F070702	Metatranscriptome	122	N
F075487	Metatranscriptome	118	N
F075502	Metatranscriptome	118	N
F078016	Metatranscriptome	116	N
F078027	Metagenome / Metatranscriptome	116	Y
F089598	Metatranscriptome	108	N
F100157	Metagenome / Metatranscriptome	102	Y
F102187	Metagenome / Metatranscriptome	101	N
F102218	Metatranscriptome	101	N
F102267	Metatranscriptome	101	N
F102612	Metagenome / Metatranscriptome	101	N
F104141	Metagenome / Metatranscriptome	100	Y
F104406	Metagenome / Metatranscriptome	100	Y
F105213	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0315849_100268	Not Available	2285	Open in IMG/M
Ga0315849_101396	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	1496	Open in IMG/M
Ga0315849_101668	Not Available	1411	Open in IMG/M
Ga0315849_103126	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus → unclassified Ourmiavirus → Erysiphe necator associated ourmia-like virus 88	1133	Open in IMG/M
Ga0315849_103983	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus → unclassified Ourmiavirus → Erysiphe necator associated ourmia-like virus 88	1041	Open in IMG/M
Ga0315849_105805	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus	895	Open in IMG/M
Ga0315849_105892	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus → unclassified Ourmiavirus → Erysiphe necator associated ourmia-like virus 88	890	Open in IMG/M
Ga0315849_106589	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	849	Open in IMG/M
Ga0315849_106885	Not Available	833	Open in IMG/M
Ga0315849_107051	Not Available	824	Open in IMG/M
Ga0315849_107415	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	806	Open in IMG/M
Ga0315849_108096	All Organisms → cellular organisms → Eukaryota	775	Open in IMG/M
Ga0315849_108261	All Organisms → Viruses → Riboviria	769	Open in IMG/M
Ga0315849_108502	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus → unclassified Ourmiavirus → Erysiphe necator associated ourmia-like virus 48	760	Open in IMG/M
Ga0315849_108580	Not Available	757	Open in IMG/M
Ga0315849_108678	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea	753	Open in IMG/M
Ga0315849_108720	All Organisms → Viruses → Riboviria	752	Open in IMG/M
Ga0315849_108721	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus	752	Open in IMG/M
Ga0315849_109026	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	740	Open in IMG/M
Ga0315849_109050	All Organisms → cellular organisms → Eukaryota	739	Open in IMG/M
Ga0315849_109452	All Organisms → Viruses → Riboviria → Orthornavirae	726	Open in IMG/M
Ga0315849_110012	All Organisms → Viruses → Riboviria	707	Open in IMG/M
Ga0315849_110452	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	693	Open in IMG/M
Ga0315849_110686	Not Available	687	Open in IMG/M
Ga0315849_110851	Not Available	682	Open in IMG/M
Ga0315849_110914	All Organisms → cellular organisms → Eukaryota	681	Open in IMG/M
Ga0315849_110961	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae	679	Open in IMG/M
Ga0315849_111233	All Organisms → cellular organisms → Eukaryota	672	Open in IMG/M
Ga0315849_111879	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Amabiliviricetes → Wolframvirales → Narnaviridae	655	Open in IMG/M
Ga0315849_112163	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae → Ourmiavirus → unclassified Ourmiavirus → Erysiphe necator associated ourmia-like virus 48	648	Open in IMG/M
Ga0315849_112936	All Organisms → cellular organisms → Eukaryota	632	Open in IMG/M
Ga0315849_112964	Not Available	631	Open in IMG/M
Ga0315849_113062	Not Available	629	Open in IMG/M
Ga0315849_113411	All Organisms → cellular organisms → Eukaryota	622	Open in IMG/M
Ga0315849_113550	All Organisms → cellular organisms → Eukaryota	618	Open in IMG/M
Ga0315849_115293	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	586	Open in IMG/M
Ga0315849_116374	All Organisms → cellular organisms → Eukaryota → Opisthokonta	568	Open in IMG/M
Ga0315849_116419	Not Available	568	Open in IMG/M
Ga0315849_116547	All Organisms → Viruses → Riboviria	565	Open in IMG/M
Ga0315849_116680	All Organisms → Viruses → Riboviria	563	Open in IMG/M
Ga0315849_116904	Not Available	560	Open in IMG/M
Ga0315849_117209	All Organisms → cellular organisms → Eukaryota	556	Open in IMG/M
Ga0315849_119472	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	524	Open in IMG/M
Ga0315849_119627	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae → Pleosporaceae → Alternaria → Alternaria sect. Alternaria	522	Open in IMG/M
Ga0315849_119916	Not Available	519	Open in IMG/M
Ga0315849_119924	Not Available	519	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0315849_100098	Ga0315849_1000981	F102187	MLHVYTAIVMTLHHGNDAKRGACAAPTITMLYPYDLVIYPTFSFLSYSLTHRRLCHNAWTALGVTSLLHPHTQGIATRVTKTKFRLFPLGLGGWIGRESWGWLRTSCTRTRLFLVGDDDFLHPFPSVTCPPFVCIYGVCEGNISLAFQRRLYTGSFSSFFVITVARQSRAALGVRDAWLRAFLSFPVVYSERKSFVPTFVSRVYDNNRDYGVEKGNGNTCRHACRCISMARRSG
Ga0315849_100268	Ga0315849_1002681	F050038	VKGSRHLRAPKLALMTSGTLPIKECTAASVKPNTGSEAQTCRSCKRTAIDTRETISNGLRLIRIRYGIPYSELPDLRPTDLSRFLSFLLLQGRDRPSVKFPRRQRPSENGLMTLQRLRKHERWELAHSISSIKRSLPSGCLSCANSERSSWEANAFSIPPSSPSDYLRFFRKEVSKIFPYNWDRNYADFVWRHCPNASARMNSKRADHYFAGKGEIFRRQCLTGKSIPVDEPVRARYKAVMSAGKSRPLVIYDESVEILAPLHKTIESVLMKLPWRLVGPPTEKVISSACVYPCQTSVDLVSATDNLSLDVTEAILGTLLRKSRNIPGPVRLRAHQSLRPIIDCGGEEREVSHGQMMGSYLSFPLLCLHSYLAARWALAGREGTILVNGDDTLVSANVYLEASSYPRGYKLNDMKTIRSGSVAEINSTAFLKNSKGKWREIRHLRRGGFLSDYHGMLHGAAAVRGSVEWTNAFVRSRIGKKWGFLPSQLGLHPRSYPAYERERSMSNRFFTCLPGPPTEASTSLLAVRRELDPDEKIAMYLHQWRYGREGGRKRDVYKPTVGCVRRTYAYRAVKPWSRLSYLGKLRSLKVTARSEEEELHYLPADYVSKREDEILSELRRFGSSVFEDL
Ga0315849_101396	Ga0315849_1013961	F050038	LKDPPVTWLLSSITMTRSGTRLRTTCTAASVKPNIGSEAQTCRGCFRSACDTRETISNGLRLIRIRYRIPGSELPDLEPKELSKYLSYLLLQGRKRATVVFPRKQSLRRDSDGLLPLMRMLKHERWEFAHSVSSIKRSLPQGCRQHTPSARPAWEQNAFSTPPPPSSDYLRFVRSEVSELFPYGWDRDYDDFVWRHVPNASARMNSPRADLHWCGNGKEFRRQCLTGRSVPIDQPVRARYKEVMSAGKCRPLVIYDETTEVLAPLHKCLDSHLMRRSWRLVGPPTEKKISSACVYPCQTSVDLVSATDNLSLDVTEAILGSLLRKSRIPGPIRLRAFQSLRPLVDCAGEEKEVSHGQMMGSYLSFPLLCLHSYLAARWALRGEEGNVLVNGDDTLVSANRFLEASDYPSGYLLNDLKTIRSGTVAEINSTGFLRGRGGKWREIRNLRRGGFQTDYAGMQHAAKAVAGSVAWTDAFVRSRIGKKWGFLPSQLRLNPKSY
Ga0315849_101668	Ga0315849_1016681	F102267	PALDPRVPVLVQPFKGLVENGVITELSVKFSSMGTEVKGKASQRLVDVEKSGLNTTDFFPVGRLLEVAEMGEDPVLKRPGKKGNKGAGGPAQVKPARSLCKEDFTLAPAALQQRANEIARACGGGPLVGRVRSAGRFDGTETVSYREWWDSAGAELRALSLSEGKRFNTFTPEEMGVLTGLQCPFRGTLEFTVKEEDEEE
Ga0315849_102920	Ga0315849_1029201	F008406	SEFPCLINGDDILFRSGPHFSAHWMDTVGQLSLEVEKTKTSVSPEFGSLNSTLCRRYGAFYRVVATVRMGMLRESESYDTLSKGFDDFIAGLKGSLRYRAAMAWFSWNIGKIRPLGLTTWDLGFRGPLAYRATKKFGLRQGPSLQKIPSLKIENGLSLTCEYVDPDLLDQDEKKENLAELAAWKWRTGFKVSSATRASMDLHLAVSATRRDAPDFKPYLYGGESGVISRNVGGAKIFRQRVRVIERGFPLLIPMRGKLPTYEEFLAGEVDVGSVEPLVKKK
Ga0315849_103126	Ga0315849_1031262	F078016	FSLNSTYFISSKSSGPRFAPFIRSSCLFNRVEDTGEVAGRLKGCVVGSGLFREKVQTFLLKNIIAGVFSTQRSLRRGLGCTLSNRVIRWSQLSSREDFYLSLSSEPSVPLRKRLWMHNSIPDGYVRCVGVEDDESFSSNMIETAWSRPPIHGGKQTDDEYWEYVRRGTYRYSPFSAYKFWLVAGGVGKLPEPTLQCRRAEKMGWKKQREGGIAFVSAGFI
Ga0315849_103983	Ga0315849_1039831	F078016	GKTMFHRSVFSLNSTYFISSKSSSPQFAPLIRSSCLFSRVEDCGEVAGRLKGCVVGTGVFKEKVQTFLLRNIASGVFSTQRSLRRGLGCTLSNRTIRWSQMSAREDFYLSMPSEPSVPLRKKLWMHNSIPTGYVRCKGVPDDESFSFNMIETAWERPPIKGGKQTDDEYWDYVREGTYRYNPFSAYRFWAMAGGVGELPRPTLQCQRAEKMGWKKQNEGGIAFVSAGYM
Ga0315849_104811	Ga0315849_1048111	F042666	ECSQSTRHTKETIHNGLQLLRVRYGLPYSELPDCDSGDLSRFLSFLLLQGKERTSVAFPRRQRRGEDGLCSLQRLCRRDRWALAHGCSSIKRNLPKSCRRHTPSARSQWEKTACSQPPPPSPDYIAHVRRVVSGIFRPGWDRNYHSFVGNHVPNPSARACKGRADALWAGRRDEFFIATTSESEVVPHCLSGRYKDILSAGKTRPMLIFDEHVELLAPLHKLLYSHLAKQDWLLCGPPTEERMASVLVNDYQTSVDLVAATDGLDLRVSQTILDTLFFTSVKIPRTLRAFAKSSLHPFFKDLEGKVSRVSHGQMMGAYLSF
Ga0315849_105805	Ga0315849_1058052	F015954	LRGRGGKWREIRNLRRGGFQTDFAGMQHAAKAVSGSVAWTDAFIRSRIGKKWGFLPSQLRLHPKSYVAFERGRSMWNRNFTCLPEAPNVPSTLLLGVRRRLDPDEQVALFLHQWATGREGGKKRDVFNPSVGLVRRTYAYRAKKPWSRLTFLGKLAALKVEPAHREEELRFLPVDYVSLREDVVFRELAAYGSSVFEDD
Ga0315849_105892	Ga0315849_1058921	F078016	GEVAGRLKGCVVGTGLFREKVQTFLLRNITAGVFATQRSLRRGLGCALSSRVIRWAQLDKREDFYLSFPSEPTVPLRKRLWMHNSIPLGYVRCAGVTDDESFSFNMIETAWSRPPIAGKKQSDDEYWDYVREGTYRYVPFSAYRFWTMAGGVGALPKPQLQCRRPEKMGWKKQREGGIAFVSAGLLRG
Ga0315849_106589	Ga0315849_1065891	F042666	LRKFAFQRSSSRVAHVKRSVDNSTSGSTVKRCFDCSLSDRHTKETIHNGLLLLRVRYGLPYSELPDCKPGDLSRFLSFLLLQGKERTPVAFPRRQRRGENGLCSLQRLCRRDRWALAHGCASIKRNLPKSCRWHTPSARSSWESTARSQPSPPSPGYVEHVRRVVTRIFRPGWDRSYNSFVGNHVPNPSARACKGRADALWAGRRDEFFTACTSESEVVPHELSGRYKDVLSAGKTRPMLIFDESVELLAPLHKLLYSHLAKQDWLLCGPPTEEKMASVLVN
Ga0315849_106885	Ga0315849_1068851	F009606	QKPIENGRGPNVVRTKAKPKVNPVTGANFEFVNEPRIGDSIVVVLAGPSGVQSFTFHHPIGVTDVDGEDWVCTPTADIPSLLARRDDPDEADRKAKRDRYRLQLAVAAGLLKKADGDDQLVYPDTEINRQDALAAARAAAKDAVKAEKGKTPPDLYIRFLPQAVQEKEVAIRDKLAAKATIQAAETKFPSSGYRTRGGPLADRDQSSVEYLEGCSRSQASDAITKRIFG
Ga0315849_107051	Ga0315849_1070512	F052301	RKPATVTPTQGLSAAYRGDSRIKDAFVVTVSGPGGTRSFTVHRPIGDTPLGDGEWVFTPVGEVTTLLSRMENPYEKRTEELRAKQRISWAVTKNLAKFDADGTTLLLPCGKKRAELLKEAHRAAKETAKSKNTKPGAQDFLLHLSPQEKKEETALSDYLKSENVVRAAERAVPLPQYETCGGPLADHKQVGVKYLQNVGNSHQAVDKLIYHLAAGGDSAASAEATAGSPAAKRQASPPKESPTK
Ga0315849_107415	Ga0315849_1074151	F104406	LPGMVAGVFIVALSEELEERKAALPARKGISAVTGLARRAIEAADRVVENMLATNRK
Ga0315849_108096	Ga0315849_1080961	F104141	LPSLLQQRDQEVNGHVDVLSEFFFSEVDSSDSGTHTEDLLQLESNGGLDFLDLVFDLFVFTDSDGELADLVEGVTHELGDLLHEGFRSDQDIKRLGPLLDELFILVELLSTIDIDATDIDLLGLVTVDGSTDETDLSVGGGDVGELDGTVETLILLGVVISETNLEFDGFSELSLLSVGQHVGN
Ga0315849_108261	Ga0315849_1082611	F025888	DELEKQLPGCGEFLQDYLKIAVEYVMENITYVPILPIVAEEKGLKTRFPTCSLTAVNLVQQILRRVADHVMIRDPRFSEALGGDLRMDMRGEDGPWDSQDATAATDYHPEWLTRGFYEELADRYSSLAPYRRWFSKLFGPKKILTCDPTLCEPVSLLTHYPKAPLLDDHPAEMFHGVRVKKMGPGLTGLGHAEDILLYWNDWLDDLNGLPGTITTPGQMMGDPTSFPPLMLVTLCSAEQTLEVYPYTPKERRRWYR
Ga0315849_108502	Ga0315849_1085021	F044843	IPGPVRLRAYQSLRPLVDCSGEGREVSHGQMMGSYLSFPLLCLHSYLAARWALRGEEGNVLLNGDDTLVSSRRYLEASDYPSGYKLNDLKTIRSGTVAEINSTGFLKGKGGKWREIRNLRRGGFLADYAGMQHAAKAVSGSVAWTDAFIRSRIGKKWGFLPTQLRLNAKSYVAFERQRSMWNRNYTCLPEAPNVPSTLLSAVRRRLDPDEQVALYLHQWATGREGGRKRDVFSPSVGSIRRTYSYRAVKPWSR
Ga0315849_108580	Ga0315849_1085801	F028371	LVELFFDLVINVSFLDSSGNSGLNVSGLLNFDMFLFVLLSLTEFNSVVSQVPLSEGSGINLDDGALNQGVGSDQFVVGGVVDDDKDLGLSGDLFRRPGEVTGVELEGLEFVVTTSDTESSDSLFTDLGEGSGSSGFVLLLLLVDGHTTTGKTSLVSGISRDTHVLF
Ga0315849_108678	Ga0315849_1086781	F013054	VLFRSEFDLDVSSGQSLVDIGNSVDLILKGSFFVLVKEDFLDNGAVELVSESSSDDGSGEDEIIEESIIDGVKGSVSGSLLGSVVLNPLGLDGSLGGDENVGLESLLEFGDELSMNSVDDSVAGIGDVDDDDVLLLALADDFNFSGVSDEEVLDGVLKISDTILDFEESLSDSFFNDAGVSSGGLVELGLVVGHEGRSG
Ga0315849_108720	Ga0315849_1087201	F043722	GDATRPTRSIPKFFWKLSPYYYTWMLAIRLGLPLGAPEAYGGIGLPIAPKRSSTDHVRWLSYLSQRPKDELVIGLGLSPLGRSGQSLLDRAASGWVREVLASDVQWASEGLELLSPLALSDDAQLRLSLSEGYRKSVSRIRSVEFYFRAPPGTLEPHAPSVRMSVDRFRRKVSGAVILGSKMKYANTIRDLERKMQIFFTTSGGFLPDPWAEPSSVYGLERSTEVKVRWKAPWLLGVG
Ga0315849_108721	Ga0315849_1087211	F069521	LSTLSRREYRLHSKKSWFRRARTDGPAPTIKKGVKRSVEMVVGPPPKAFLYPIFDTMAKDVAGDVVSGWTGVPVKPERVSIDYLSYRERSSQTPSYQPPSFRQLQRGPRLWSFVWPRPVYDHFKSFGSRVFVTENARRSLWIDDHPCLHVSMELVRSRFVRGARNFRSYFGPPASLSPLSLPQVNCGYA
Ga0315849_108931	Ga0315849_1089311	F089598	PVDTWLLTSITMPTSGTRFRSSCTAAPAKSIFGSGAQTCRGCFRSACDTRETISHGLRLIRIRFRIPDCELPDLKPSDLNRFLSYLLLQGRERAAVVFPRKQSRHRDAHGLLPLMRMLKHERWEFAHSVASVKRSLPQGCRQHTPSARPAWEQNAFSIPPSSSPEYLQFVRTEVSRIFPYGWDRNYADFVWRHVPNPSARMSAPRADMYWCGKGLDFRRQCLTGRSVPIDRPVEARYKEVMSAGKCR
Ga0315849_109026	Ga0315849_1090261	F023769	LPQMTLRKFAFQRSSSRVAHVTRSVDNSTSGSTVKRCFECSQSTRHTKETIHNGLQLLRVRYGLPYSELPDCGPGDLSRFLSFLLLQGKERTSVAFPRRQRRGENGLCSLQRLCRRDRWALAHGCSSIKRNLPKSCRRHTPSARPQWEKAACSQPPPPSPDYIAHVRRVVAGIFRPGWDRNYHSFVGNHVPNPSARACKGRADALWAGRRDEFFIATTSESEVVPHSLSGRYKDILSAGKTRPMLI
Ga0315849_109050	Ga0315849_1090501	F078027	MRLSVFGEGESGLKVLSQQFSLLDNSEEGSINFSLDLLSFTDVLLFGFRLFRGTSGEESIFTLLGSLGLLSLEEFVSDLFSLDGSDINLGGGGDDGRLVDSSEGNTVELIGTGDQKKSGLELLKEDDSLTLESTDEEDQDGTGSDVLSEGNSLGGLGGVLSDSLDVVSRVPLGDGSRGNLSSLNSS
Ga0315849_109452	Ga0315849_1094521	F105213	GKARSVTKARACLKIVLDLVSKLCSEPLAKGIRSSQSGMSASNHGWNFFNSFTNELEKSEVFSLLSRDETSFEGYVERTDTFEDLFVSSTDYSEATDLLQHTVGRDLGIPWMTKCGIPRVLQGIVVETCYKPRQIYFKATGLLADLGDPTDAKDIRVVTLRRGVLMGDPLTKPVLHLVNVCDRLLQKRIIDPDFYSRLSNYNQLAETLSRVKVLLNA
Ga0315849_110012	Ga0315849_1100121	F025888	QDYLRVGVEYIMESIVYVPILPIVAEEKGLKTRFPTCSLTAVNLVQQILRRVADHVMIRDPRFSEALGGDLRVDMRGEDGPWESQDCTAATDLHPEWLTRGFYEELAERYSCLHPYKRWFPKLFGPKKILSSKPDSLLPSALLEEYSRAPLLDDSLLKPSRMRRGRNGLGHADHILEMWSDWLSMLNGLPGTITSTGQMMGDPTSFPPLMLVSLCSAEQTLKVYPYTTKERRRRY
Ga0315849_110452	Ga0315849_1104521	F102218	FKNCIEERKTNVSALWMEEGIEDVAGFAREATKTARGFRMVMLSNVSRLARQKIKTAHRLPGDLIATILSSKRLKHAISARPAAKVPELTNLFPVIPLPDGYGLSREEEVVVLRREVQRARDEKRWTDLYNQRKKRKVLQKTLALPGERLPGRKIWKLLQPKKTTPRETTLSCFAREWEQKRKEALLADSAFDDPPMIVSDLSGIDRMIDAIKYWKKTKEMVGVCAVEAPV
Ga0315849_110686	Ga0315849_1106861	F045460	FGHPAPNFSLSGDCLEQSRQVKKLLGSCPSNDHKEIMAWQSIKKGLPDSCECMTGPLMEKLVEGVRRPRRQLPVGYLRFVAQQTSRLFSKGWDLGYEEQVLLTSPPLSATTDSTRSEGGSLGTGIDHSCFLTEALSGPSRPSRPAPEAELIVVQSAGKPRPLTKFSSDELLLRPLHKTIYNHLSRCKWLSRGDVSDEKLAKAGFHQGKGILTSGDYASATDNLSIEVA
Ga0315849_110851	Ga0315849_1108511	F028052	MDVDHFIRKASVVEKVVFLDFYGAEMNTSPMVCLDEDLYIVYHDTQAYVYTPRMFQEYMRRCRAAEVCALYPDSDVAEEPALKESPVTPPTGGFPGTDPRDGTDRTARWIHDQVATSGNRTVSRFLEENPSKDLTRAPDGKKLAIRPTGDHRRSKSDGETQRIGLDGSLIPLRQRDVRRDFRIRPPNSSDIPPR
Ga0315849_110914	Ga0315849_1109141	F068418	MDSGVGDQVSLEFGDIDVKGTIESEGSSQGGDNLSDKSVKVGVSGSFDVELSSADIVDSFVVEHNS
Ga0315849_110961	Ga0315849_1109611	F100157	SKGFLAMNDTPRWVSSFLRPAWSWAVRFEGFSRLYLAGTLSQTRGSGTPPPLVVLRSKRKFLLSVSEPPPEFTPTQSALVSAALDDVIGGIPDHVFTGLDTKARVTVTGSACWEATRKEGGTAQAILDLMSKYDEMPIPIRDMDTGKVLEYRHKDDFQSVGTAIFFACLDEVLWTEPEELRKVMLTIVREPSKARVVTKGLAALKIVLDTISKICAWPLKKGFKS
Ga0315849_111233	Ga0315849_1112331	F010295	VLGELSSDGSGLSVSEVGGVVLALNLFSDLFSVSLVDDGQVLGDGLSDNLDLAELGRGGATSDLKSSEGLEFLLVFFETLDEFVVSDGSKLENSELLVGHFDEDL
Ga0315849_111410	Ga0315849_1114102	F075502	QLSTMSTPNEIKNRNIEAMARALLLAIPLLRGLDDHLDPEGTLRRLLQKITNGEPCPSGLLASTTEALQSFSKTLKVSARVASGSSTRHAKRVSFEEEGSYRDLYETFVPEGVPLTTKAPSGLLLPTTDTVLVFSDTEISQFLRDFAVTALGSGLSPQQLTARK
Ga0315849_111879	Ga0315849_1118791	F100157	SKGFLAMNDTPRWVSSFLRPAWSWAVRFEGFSRLYLAGTLSQTRGSGTPPPLVVLRSKRKFLLSVSEPPPEFTATQAALVSAALDDVIGGIPDHVFTGLDTKARVTVTGSACWEATRKEGGTAQAILDLMSKYDEMPIPVRDMDTGKVLEYRHKDDFQSVGTAIFFACLDEVLWTEPEELRKVMLTIVREPSKARVVTKGLAALKIVLDTISKICAW
Ga0315849_112163	Ga0315849_1121631	F044843	PGPVCLRAFQSLRPLIDCDGEEKEVSHGQMMGSYLSFPLLSLHSYLAALWALGGREGTILVNGDDTLVSANVYLEASSYPSGYKLNDLKTIRSENVAEINSTAFLKGAKGKWREIRHLRRGGFLSDYPGMMHGASAVRGSVEWTNAFIRSRIGKKWGFLPSQLGLHPKSYPAHERERSMSNRLFTCLPVPPTEASTLLSAVRRQLDPDETIAMFL
Ga0315849_112936	Ga0315849_1129361	F042678	MNPFPLDSESGELTVFSDDLNIGTILSELAFFLESSVVFVGNLGETDFTRNNDLLSTGELELASSESFNSMRNVLFNKSDGVEDLVDLDSGDLTDGFTEGTSHTGLKSISTGAGKHFVNSDNVPRVVSASQVETFLTTLLDKVL
Ga0315849_112964	Ga0315849_1129641	F030309	SSTPLLAKENPLHVKGEAKSKALSDAERKVLRSFFKLKEDRIPSDEWAAMDNKTRSVAMAERSIPRWASEAVLRKSSNLQLIIEGKITKETAQQAPRDPKKISALKANGQALEAWQQLKADFKGTPLLKKPASAKEKAFKKRFDSLVSTYGQQPCFPKLRERPDQQGRPSSRGRSRSSGPGGDFLEMAKAFGEIARAFSGRSN
Ga0315849_113062	Ga0315849_1130621	F021791	DYRIKPHVPPFEQIPANSVKFQPCDCTAQAEYLTR
Ga0315849_113411	Ga0315849_1134111	F006377	VGRTLGGTDTWLTMGSGLVGKTEFSHILSDHVELDFDIGVFFTSMDTNNGSDHFGEDNSVSEMSLDGKGLLTRLEVLLGLSELLDESLIFMLETSAESSLDSGSEEFDELVVLEGDEIFEGETSEGVFLSGTFLSYVSHDL
Ga0315849_113550	Ga0315849_1135501	F006377	VRRTLGSTDTWLTMGSRLVGKTEFSHISSDHVELDFDVSVFLTSVDTNNGSDHFGKNNSVSEVSLDGVGLVTRLEVLLGLSELLNESLVFMLETSVESSLDSGTEEFNELFVLKGREILEGETSEGIFLSGTFSSLLTHVIC
Ga0315849_114483	Ga0315849_1144831	F070702	SLHPFFKDLEGKVSRVSHGQMMGAYLSFPLLCIHSYCAASWAARDQMDARFLVNGDDTVISAGREISVQDYPQGYRLNADKTIRARNTAELNSTVFLKSRGRWREIRHLRRGGAVADFPGMIHMAKAVMVAPGFVDAFQRCRIGRRWGFLPSQLGHTTYPSYKRERGLRVRRFWTPLPEPSSDVEFPEELVRITGRDPT
Ga0315849_115293	Ga0315849_1152931	F044246	CTSMELSRFLSFLLLQGKERTSVAFPRRQMKNGKESNGLCSLQRLCRRDRWALAHGLASIKRNLPRSCRRHTPSARSSWETNACSQPPPPPSDYLQHVRRVVTGCFRPGWDRNYNSFVGNHVPNPSARACRGRADALWAGRRSEFFTAATSEMEVAPPALTGRYKDILSAGKTRPMLIFDESVELLAPLHKLLYS
Ga0315849_116374	Ga0315849_1163741	F018668	TSNNNHIRFSQPFYQPTQSNKMAFFKTLLIASVAAFAYAAPQGGASDGNTKVGIDSQSNGAACGNGQKLACCNSGEDLIGLNCLSVPILAVPIQQACGSNVAACCQTGDADGNLINLELNCLALPL
Ga0315849_116419	Ga0315849_1164191	F075487	SQRTQSHDLPLASRVVERVRDAIMGPSTPLCEGIDGHSVPCRWTPCPHESAALLRSQATGYTNDVPVCLDERCAWRTPVGGWLSGSQRRVSTTSSTRWWPWGSSPFGDQSPSGGSVYQTIGKYTVLVLGAAVAIGVGWAWARWRSSPAEPDLERGTESAGRSKGDKSPLPRRGAGKSPASSRPSTPPP
Ga0315849_116547	Ga0315849_1165471	F025888	RFPTCSLTAVNLVQQILRRVADHVMIRDPRFSEALGGDLRVDMRGEDGPWESQDCTAATDLHPEWLTRGFYEELAERYSCLLPYKRWFPKLFGPKKILSSKPDDLLPSALLEEYSRAPLLDDDLLRPSRLRRGRNGLGHADHILEMWSDWLSMLNGLPGTITSTGQMMGDPTSFPPLMLVSLCSAEQ
Ga0315849_116680	Ga0315849_1166801	F043722	ASAFGGDASRPTRSIPKFFWKLSPYYYTWMLAIRLGLPLGAPEAYGGIGLPIAPKRSSTDHVRWLSYLSQRPKDELVIGLGLSPLGRSGQSLLDRAASGWVREVLASDVQWASEGLELLSPLALSDDAQLRLSLSEGYRKSVSRIRSVEFYFRAPPGTLEPHAPSVRMSVDRFRRKVSGAVILGSKM
Ga0315849_116904	Ga0315849_1169041	F030309	DAERKVLRSFFKLKEDRIPSDEWAAMDNKTRSAAMAERSIPRWASEAVLRKSSNLQLIIEGKVTKETAQQAPRDPKRISALKANGQALEAWQQLKSEFKGTPLLKKPASSKEKAFKKRFDSLVSTYGQQPCFPKLRERPDQQGRSSSRGRSRSSGPGGDFLEMAKAFGEIARAFSGRSN
Ga0315849_117209	Ga0315849_1172091	F078027	VLSQQFSLLDDGKEGSIDFSLGLLSFTDVLLFFFGFLSRGTSSEESIFTLLGSLGLYFLEEFVVDLFSLDTSDINLGGSGDDTGLVDSSKRNTVELIRTSDQKEARLELLKEDNSLTLESTDQKDQNLARSDVLSKSNRLGGLSGVFTYALDVVSGVPLGDSGGGDLSSLNSAGGFLGVLGCHCN
Ga0315849_119472	Ga0315849_1194721	F033276	PTKQGVISMDLRPENYSLSRDEEHNAMLEEIERVRERGVARGSERKIKHRPGVIPAARSFNAVRKQLNKAAPDVIPACYVRCFINKVKEEGILREVAPLEMSLPPGDGSQINRLIDNIRAFKLTRNSSASPGTIDAQADFVSLCC
Ga0315849_119627	Ga0315849_1196271	F102612	QRLETLYQSLPDLLTTEQEDKTGTEALEQDVGKLDVKEQNLEDRVNKYCQEFLYIGGPTPYKRDLTST
Ga0315849_119916	Ga0315849_1199161	F030309	SSTPLLAKENPLHVKGEAKSKALSDAERKVLRSFFKLKEDRIPSDEWAAMDNKTRSVAMAERSIPRWASEAVLRKSSNLQLIIEGKITKETAQQAPRDPKRISAFKANGQALEAWQQLKSEFKGTPLLKKPASSKEKAFKKRFDSLVSTYGQQPCFPKLRERPDQQGRSSSR
Ga0315849_119924	Ga0315849_1199241	F018299	ILSELAFFLKSSVIFVGELGETEFARNDDLLSTGELELASSESFNSMGNILFNESDGVEDLVNLNSGDFTNGLTVSTSHTGLESISTSAGQHFVNSDNVPRVDSTSQVETFFTTLLDQVLVSSNTASFHGFGGDLFLFKGDKVDGIGEFFNFSSLSTSIVNSDSGIGDTSVIT
Ga0315849_120581	Ga0315849_1205811	F015954	NSTAFLKGRGGKWREIRHLRRGGFLTDYPGMLHAAKAVAWSPQWTDAFIRSRIGKKWGFLPSQLRLNPKSYACHERARSMWNRNFTCLPEPPKEVSTLLLAVRRRLDPDEQVALFLHQWATGREGGLKRDVYRPTVGCVRRTYQYKAVKPWRFLSYLGQLRALKVPAGR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300031327: Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T20 (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences