Sample 3300031172

3300031172: Metatranscriptome of Chrysochromulina tobin associated microbial communities from unialgal haptophyte culture, Seattle, Washington, United States ? P3_D6_32mM_2 (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300031172 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128781 \| Gp0267116 \| Ga0228595
Sample Name	Metatranscriptome of Chrysochromulina tobin associated microbial communities from unialgal haptophyte culture, Seattle, Washington, United States ? P3_D6_32mM_2 (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	35716804
Sequencing Scaffolds	23
Novel Protein Genes	30
Associated Families	28

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Haptolina → Haptolina brevifila	3
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi	1
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	10
All Organisms → cellular organisms → Eukaryota	3
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae	2
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales	2
Not Available	1
All Organisms → cellular organisms → Eukaryota → Haptista	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Chrysochromulina Tobin Associated Microbial Communities From Unialgal Haptophyte Culture In Seattle, Washington, Usa
Type	Engineered
Taxonomy	Engineered → Modeled → Simulated Communities (Microbial Mixture) → Unclassified → Unclassified → Defined Medium → Chrysochromulina Tobin Associated Microbial Communities From Unialgal Haptophyte Culture In Seattle, Washington, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Unclassified

Location Information
Location	USA: Washington
Coordinates	Lat. (^o)	47.6519	Long. (^o)	-122.3113	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F007958	Metagenome / Metatranscriptome	341	Y
F008291	Metagenome / Metatranscriptome	335	Y
F008934	Metagenome / Metatranscriptome	325	Y
F010978	Metagenome / Metatranscriptome	296	Y
F016912	Metagenome / Metatranscriptome	243	Y
F019772	Metagenome / Metatranscriptome	227	Y
F024700	Metagenome / Metatranscriptome	204	Y
F024710	Metagenome / Metatranscriptome	204	Y
F026197	Metagenome / Metatranscriptome	198	Y
F028693	Metagenome / Metatranscriptome	190	Y
F030342	Metagenome / Metatranscriptome	185	Y
F039952	Metagenome / Metatranscriptome	162	N
F039966	Metagenome / Metatranscriptome	162	N
F042124	Metagenome / Metatranscriptome	158	N
F042134	Metagenome / Metatranscriptome	158	Y
F043264	Metagenome / Metatranscriptome	156	Y
F044875	Metagenome / Metatranscriptome	153	Y
F047450	Metagenome / Metatranscriptome	149	Y
F055416	Metagenome / Metatranscriptome	138	N
F069666	Metagenome / Metatranscriptome	123	Y
F074330	Metagenome / Metatranscriptome	119	N
F076751	Metagenome / Metatranscriptome	117	N
F076965	Metagenome / Metatranscriptome	117	Y
F080772	Metagenome / Metatranscriptome	114	N
F087987	Metatranscriptome	109	N
F091182	Metagenome / Metatranscriptome	107	N
F095000	Metagenome / Metatranscriptome	105	N
F102393	Metagenome / Metatranscriptome	101	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0228595_101911	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Haptolina → Haptolina brevifila	2222	Open in IMG/M
Ga0228595_102018	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi	2172	Open in IMG/M
Ga0228595_105094	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	1466	Open in IMG/M
Ga0228595_106796	All Organisms → cellular organisms → Eukaryota	1270	Open in IMG/M
Ga0228595_108135	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae	1157	Open in IMG/M
Ga0228595_109905	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	1028	Open in IMG/M
Ga0228595_110576	All Organisms → cellular organisms → Eukaryota	990	Open in IMG/M
Ga0228595_110718	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	982	Open in IMG/M
Ga0228595_111170	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	960	Open in IMG/M
Ga0228595_112951	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales	872	Open in IMG/M
Ga0228595_113896	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	832	Open in IMG/M
Ga0228595_114494	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	809	Open in IMG/M
Ga0228595_117190	Not Available	712	Open in IMG/M
Ga0228595_117427	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	704	Open in IMG/M
Ga0228595_118705	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Haptolina → Haptolina brevifila	664	Open in IMG/M
Ga0228595_118865	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales	660	Open in IMG/M
Ga0228595_120398	All Organisms → cellular organisms → Eukaryota	617	Open in IMG/M
Ga0228595_120618	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	612	Open in IMG/M
Ga0228595_120795	All Organisms → cellular organisms → Eukaryota → Haptista	607	Open in IMG/M
Ga0228595_120900	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	604	Open in IMG/M
Ga0228595_121648	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Haptolina → Haptolina brevifila	587	Open in IMG/M
Ga0228595_122841	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Chrysochromulinaceae → Chrysochromulina → Chrysochromulina tobinii	560	Open in IMG/M
Ga0228595_123282	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae	549	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0228595_101843	Ga0228595_1018432	F024710	FQARAVGPSAAEQRSAAKMPCYWAGNSTPSPIFRTNRSGNGVGSSPGINPITPYTTASLDYRASWISGQTVADTKAAMTNPNIQGKLFGEAINNESKAFANSMARPAKPTVLPPPVKVQHYNETSGLERSLPTNVPDHPTAIQVNGLRQERTEHVMCPGHVFGVNSYDARVLCGNWAEERSDKSYNPSDLKASTGNDWWMETTYGEMTKNRSHLVRPPKGSNSDTMYTQKGSAFATGVKEESKSSNAEPCVPEVDDYLKGDHRSASRRPGNYVSYQAGRQHLIAAVGGKINELPFYESTTMAGYQDPAEKVLPNCTVRCDLKYKPPFQIRDPGRDGKSKMLCTVKSNEFACDDPVYNSTQIIGRPVKGKQNTYTVESYRNTWTKSPPEIVAAGLCDTSTYKACFTVPDLSKVDATRKMAGHVGSWH
Ga0228595_101911	Ga0228595_1019111	F095000	DSARASAVRVKLEAGFQHMIGANAVFEIEDFLQADALVCASHVFCAAGFEWKLWVKPYSGPNEEHVGLYLTPAEDLDQVYTADYALAIVGRQGHILQRALDGGRPKLQGRKAGHGWPTFVTRSELEASATDPASCLLQADGRLIVTCSGLSNVRPRMPQDDAAGLARTL
Ga0228595_102018	Ga0228595_1020181	F069666	PTRLDEITDLDVEQLIEAGRPGDAAVAGRMLPGLARLHGYGHVVDVAAVRAADLQCEMVGDWRRPSLLHGAAKDALNSCITGEGEPPLRLTIAAVACAGSGVICGIPVQQLREDSVEVLNLFDRGLHAPAAMLVAYLIPATSVLKNCKLLKNRFDVESAKKLTKMGMEKSIMLSGLTCDRTAANFMNEGLQPADAILIASDLQVVTTLYLSGNNIGTRVPSRSRRR
Ga0228595_104180	Ga0228595_1041801	F087987	SLRPGRGGVKASCGALARVQLSSRIQPSMRGKLPFQRLRQDVGGTPEERKLAAERAAKAKKRRQWLQQTFDVRNLDLFGYEPDYTFQGYRSNFGAYISVAVGFAVLLRFTTRILDFMYPTPLINENHLLFARDMSEGFALPTFGFIFKRSGWRPFYDPTYFTFSFQQGTSGRASNSTYVDLGDEPCSFVDAYGRIIEDEARCPAISGEVVGSFFDSRFRFVHVSMNRCHNGTDSQGRTQPGPCRRPDEIDRLIYEGTVTLAISQRDLDTGSKDEYTQLVSIKKQFTRHIHATYDMFFTVRFVTIQPRAFFDEYDVVNMKRQYVVLDRQEASFTDFQAERLGRWNQVDPTYVPKYAGFFFMLSDEKIDQQRMYLTIFDMFEALGGTLCFFYFVLRLVALRWNHVHFTQQIKGLDLRDLNRDMFDQFGRLVDRSFQVPRELQDMHNVANLK
Ga0228595_105094	Ga0228595_1050941	F008291	VERRKMLKIFGKLKYRAASLAWNSWLELLAERDRMKRFFRLVRRRTRSATRRAAEANGLRMANIPDLRSVQIASASLANDVNNLRRAVAKVEVIPEEDAKVWSFQGASGRRVLVDRRAPAPMPYGNARYTASSWKVGARSTEVHPITGQHTYDTGNLYRTVHWKDEGFGLNGRFTDAIALAGMWRNDGLNTAATRSKAVSDPTGWGTPKDNISFM
Ga0228595_106510	Ga0228595_1065101	F076751	MPDLTFSELPIDRNPLTKKPTSETWEQGIVMSRAEQTRNRMPNVTLSQAEAVAKAAIQRGKEPMDAGFWYHQPVGGRAQEARPRQPVDKNTRGGLGSKANESNVDLVVFGHEQDGAGVSEGEHWEMDQRDWLGFKKRVGGMDANNAVVDAVVFGHDQDGFTSIKKLEEEMKKLPQFAGAAGVCSSEVSSSNIMQDAKIVPSKFTKLKNSSDVDMVVFGHDQDGSGEGPNQDMEDLEASPLFFGSAGVHTTDASLKEAAMWYGGPKGRRTTPLQHSSSSTDQSFQEMQDGPGCPQARFKGSHAFAGAAGNVGTPSALPANSDGTIAWASRKVNRPTDVMQDDFAAKDLDFRTERGAGANALPVLSQEHGAGSIKAVVFSGPDPKGNRQALGVGDLPPNATLLQKRE
Ga0228595_106796	Ga0228595_1067961	F026197	DKGPTGLMMMLPVYLTLLCGAVAMPFPSWINETTLCANGQCNKPNSMYERIADIQPGYQWNDAGGYCGSWATQRAVLSKGAWISQQQVRDHTHNCGGHDSEILSCNIDEAWENLKIEYDAFDFNKEPVPQTAAYAKWLKAQLVQGHVVAWMIMWSGQDYPIYNLVPPAGMYGHVEPVIGIQSNHPLNDTTVYDDDVVVHFTDGGVNTVHRPISTLPCKWAGMGKPADCGEYSYGVGNPYGFGWAAKGFTQDPKPYQLAALKIQPWEREPDTRSGEKPEPLAGTLTAYELTPGATYDIYRWDSVKEAFTYTNEYKKITFAATTDTYVYTDDKSFMSEGTTYYRVVKA
Ga0228595_108135	Ga0228595_1081352	F028693	GVVRAARHEHTSYRNGCSWRSRDGGLPICQMTKSASRSQSDIAKIIDLAESRLISTTPGSVPPHFDDGGHLPFGGTIGNTRGPSAFGRRKATRANAIGNPQALLLNFPPQNGPAQLACWERNYKSSIYMDPSAEGERLNTTNWTVGLQGKPTEPSYLALAQQTWGNLRQTACTRPTVAPAFIPPKRDATAEQVAAASYSWKWPEREQRPAAPQIKRPEQLTQSFLEEYEQRPPWLKY
Ga0228595_109905	Ga0228595_1099051	F007958	SASASLIAHPAAMGIDTTLPGDMGVFDTEGLGEGEPIWDRMAHFINKRRLDVRNLMGGFDRMKKGFFDLATMRRALCNAFGNQWVELAMTQAEFNEVCEPYLTRVPLQNGEPSAMVQWRQLAQDLQMLAETGRPTADFLERLAAVEAKERASVMLEKEYGVSMDELKLAFEYMKQRVEMLSKRGLTDGFRRIDDDHKGSLTAEELKRFFMEEAHCPWYINDRTLWCLCDFADLNNDDEIGFLELSQVLLCQDIIQFAALVPNKKKEAQAEKDNSMKIGSRGCTVAQVREAQRECCNALINRGSGDLRQNNVRSVLAYLDVREDGMITRDEFFEKMKLLKVLK
Ga0228595_110231	Ga0228595_1102311	F047450	DLRFDVMQNMFKKANALNNNDAHFQRKAEQGTSAAKEETAGSTSKALATTSPGRSKKAAAQRDDELDQELVLYEFVEVLIRISFWRSNPYHGIHKLATKLIPLPDCLVQMLQEVVLPNAKRDDSALFKEKLATDKALQSAIESYDSKLKEWFDVHTQSMFLRGQGRKLQFQQWQDLLKKGWGTDVRKVGFTPGGGVGSWQIYQDSEITGDERCRNIFKVSLSLPQAKFAFINSQSLDQLTVGQAKDTSDVTTLEYEEFKECVARCALDKYKPITQMSGAVKIKSFCRNLLGEATTEECLNEATLIKAARYDWLRYSKPLAGQTLKEHKKWLEVWQ
Ga0228595_110576	Ga0228595_1105761	F010978	WRASCPSMPRESNPLERTSVQLMLVVAGIALFANSAVDRTDDGLPWEVTLAGFCVFAVVFCAIYAKKTEVALSIVTMIAIVMPTYYVHNYEVPASNWELGSMFPLKTSKEEVLRGCFKAAPNASRFDKMLPFDLSLAHFSVLPPGLALRVNTSEIYHSGLKLDDPLTKERTHDYLLFSSPRKVKEKTESLVLLARVPSKFEVWPKNIEDYSFSLQTASNIVAPPTMFGEVTKLDKGPAIEILQRKHHLRPFMLDVYRVEYVYE
Ga0228595_110718	Ga0228595_1107181	F102393	MILCCKPSKFNVTCWSFLTLLSACVILACAVTALDASKGFKDATMCILTNMADLKNSNMTGGNMTNVPVKLDPTVLNVASAVIDWWMYAMIAPGAAYFVILVIAVFFSCVAALCSKCCASVTSKAFIFLGWFVAVVTLAFFCVCAVLGIFTQIPMTEAFWIENVESPCNTSVVESTHQFNLANASAQDCVRLYGQSNCADSTQQLNDAAEQLTKFTLLCSCASAWLYKSEPLAAPGVVGALATLLAFFLSLGTCCTLACCYSFTAAMEKNEPKK
Ga0228595_111170	Ga0228595_1111701	F039966	MSRRVDRGTSPFGKAMIDGQERVRLRAREGEDVEWTRRVAQRAGTLKDMMDDAPTEDGVYPVPTIAAAELAMLREMCEADSMPARLEQCSIPELFRLVEGASFLDAPGALNHAQCALATRLNSKRANELRELLGATDDFGSAENRVAALVEPAFSPEGHLSVATTGPPALQPLSGVAVTDDAKEAALGMVDVGTLAELKGVNRSWLALARRVLCSRLSRCEGQPLPTELAEITDLNIKVLVDAGRPWEAAAAGRMLPGLARLRWEGFAVNVAAVREVDLET
Ga0228595_112951	Ga0228595_1129511	F016912	GDAAGYLQGDFHDVTFAFVRARLARCDNGTDVEGKPLPGMCMMPSEIDRLVYDGVLYMFEQETDMRVDESSPFLRIRQWRREFISRVHLSTDVYFTVRKVTVEPKYIFDAYLPGFKAGDSFTLLHSTQETYTDFEEEAAQYAAFYFRLAPELIRQSRSYTSLFDLFETWGAIVAFLYLVFGLTARSFNAFHFNRQVRGLDLRKLDKGQFTPFGRLIDKSFQMPREFQSMTAD
Ga0228595_113265	Ga0228595_1132651	F030342	DWKLAKPLNGQSLAAHRKWIDCWQNISIADLHYFPLWEKDVFEVMQAVFPDLTNIFAHYAKSIGGSTTAEDAVEMTMSEFKDFVKDVSLETQHLRFDVMMNMFKKANATNSNEAHFQRMAEQGTAAAKEVGAGSTSKALVVATKTKSAASQKDTEMDAELVLYEFVEVLIRISFWRANPYHGIHKLATKLIPLPDCLVQMLQEVVLPNAKRDDSAIFKEKLKNDKSMQEALDSCEASLKVWFEVHTQSMFLQGKGRKMKFDQWQELLKKGWGQMQSNNEPQPGFTP
Ga0228595_113896	Ga0228595_1138961	F042124	RPSRSPSRSDVAKAASLAEEPLIPPVVRVKNSAKAGRPFSNYQKHQAKTQALKGHTIHITSVGPYISRPEQRNLDDQGLRYRSIHKEAFKPAGLWDKYEPPLGGWGFAAAGFVLPDDLPETAKRFGSFYNTHLHQFRATAPKGNIYM
Ga0228595_114446	Ga0228595_1144461	F030342	EQMAAGDAGDNDAMATLDYGEFLECLSRCARDKYGEIKLMSLADGVRGVFQNILGEKTDEAVIRDATYIHAERYNWKLSKPLPGQSLAAHRKWCDCWQNIEIADLHYFPLWEKGVFDCLQECFQDLTNIFAHYAKSIGGSTTAEDAVEMTMTEFKDLVKDVGLETKDLKFDVMCNMFKKANALNSNAVMQQRKQEAGTSAAKMEGVGSASKAMAQTNKRSKSANKGREDEMDQELVLYEFVEVLIRIGFWRANPFHGINKLAAKLVPLPD
Ga0228595_114494	Ga0228595_1144941	F042134	SIPTCKAAFMDSQNAEQLGVGQADSTSEQAVLDFDEWLECIARIACSKYSAIKQMDPAAKVKVFLQNFFGEMSEEDCMRTSTYIRAVRYDLGDSVPLKDESPEEHAAFLAEFKQLDLSGLYGFPLWEAEVHDLLHANFRELASIFRGYCKSLGEGSSDESAKTMDLEEFHDFVIDVGLETKLHTNKAAAPALYVFEQMKEQFTRADKSGKGLAGPAANSELVLYEFLNVITRVSFYRLNPEYGELTMEHQDTLLPVPQCLDKTLRECIQ
Ga0228595_117190	Ga0228595_1171901	F039952	RKAEVADARKFIAMPSEDEEVQELKQMFSSPTKSKKHRSPARKPAWDSTPLRSRPSALVGLRPVTREPWAIDEDVYNRKFEMRDVGVPDRYLDKTARVKENNSKYVDYLCRFDQKYSEMNGGYNRFDGNPFT
Ga0228595_117427	Ga0228595_1174271	F043264	MFPQTPLMPNHRRELQTAVSTSAGLTSALANTAVGRIVLAPGTYFLNAELTVTRSVVIEAEVAGSVVLDAQASSSSRRRVLYINPGSLGVVQLIGLNIT
Ga0228595_118705	Ga0228595_1187052	F019772	KIGTDWEADGSTLIASGMLAEERYAVGSKIVRSGKTTFTYTINKVFFPDAHVFVGVAEITDDPENAKTWAFNGPTGNLYIGSKLNEHGQEQRKVHLHAEPEGATVGKQEGMTVDCGITLPDAGVRPWVFMYHEGDSVTLEEAC
Ga0228595_118865	Ga0228595_1188651	F008934	LAHLDKDGDGDIDSSEWAAGYAQLGASAPGVPNPAVWYGTLPDGPAFRITQIGMDKLYSAPSQLIDHPEYKDETGKGVIVGYAGHVPRARDKVGGSPLGHLPGTPVSPNGKVGIDMEAMMSGKFKRELPAGREKTFAQHECKPDYTPEARDKGVAGTQKPALYGEGIIPGYGGHKQGAKFNYGSTIYTNGRPKGGSAHDNYGGRNLASTGHGADSLASGD
Ga0228595_120398	Ga0228595_1203981	F024700	AGRRVALMPPKGTPRVSSLYADMDLTGVVSTLESHWVVLDAELSEIRKDFAVLRALTRKHGEFWMRPMAQLKKLRTQKENLLKEIKFQMELFNLHIQQGRDLCTKLSSVASVIKTPPAQLQSQLAIEVVSPILANSQNPLPVTNAW
Ga0228595_120618	Ga0228595_1206181	F044875	FVSECGLETKLITFDLMSNMFIKANATNSAQVRAQRQDEKRDAQSRGNDEPQWKKKPAAKLKGTSSGEEAKKDQELVLYEFLNMLVRIAFWRANPTFGNFVDKDKDGKKDKEEPTPVAYALSNMLNEIILPRAKRENSAAFRQKEMQDSKLIAVLDSYKPKLKEWYDKKVSDDSEGPRNGIISDKLGFEEWNRVLDRQDIVGE
Ga0228595_120795	Ga0228595_1207951	F080772	ERTMSHDPIPKPGSKLRARIKDPGLDPVIAMTRERHKKELQIEAQKLVVSGLTGAVLHKMLELKAVEREILELTEGVQEYQDQIDLLNDRKHDVQKNQVEKAAWCATFDKLIGPFEAKYEECKGEVKVSFDYAKSKYAISLQQLIDDFGFNPTYKRWFDEF
Ga0228595_120900	Ga0228595_1209001	F039966	GEAVEWTRRVAQRAGTLKDMMDDAPTEDGVYPVPTIAAAELAVLREMCEADSMPARLEQCSISELFRLVEGASFLDAPGALNHAQCALATRLNGKRADELRELLGATDDFGSAEERVAALAEPAFSPEGQLSVATTGSAAGPPALLPQPSLSGMAVTYDAREVALGMLDVGTLAELKGVSQSWLALARRVLCSRLSRCEGQ
Ga0228595_121302	Ga0228595_1213021	F076965	QVEAGDVDADSSAVATLDFTELGECIARCAVNMYEHLMKTFLPSHDRKAMTMADATRSFLRNLLSEKTPEMCMWEATVIKADRYDWQKQTKMLPGFSPAQHKLWLKCWSQVTLIDVHHFPLWEKGVHDTLQQHFSALMRIFSHYSKGVSGVDSVADALEIELEEFHDFVKDAKLETRMINFTTMSVIFAKANATNTME
Ga0228595_121648	Ga0228595_1216481	F091182	RALAAAMDAAAAAQRGSASLLATEMWVQQWSRAHYSVLLPELRKWELYPEGLVSFEVFADSLNDIGFPAMGRWNEVESVFYSWEPDEAGRLHWNVLRNRMTGGRLVRVQQAKHTTVSYYKQASRAGEGFGNRSSSRFNSGTVDRVGPGKYSPALATHGALATSSGHSGKLKSTAPRFLKKPQSDAPGPGKYTPRH
Ga0228595_122841	Ga0228595_1228411	F074330	MVLNPTSTGFLLLASVVVLIASLFLTYDPVDLCAASNGLKFCVGFNNAYAFVMCIMEIIVCVVALFMLKMKQAILQKVLVAKAPLIGPITVEGLISLFLFVNITIGAFILTNMPEHGFDQTNNGYFACWAGACASLGNIGVDPAKMVDDLRAKTGVSPAFGLIISSIMVLLQSYPYLAFD
Ga0228595_123282	Ga0228595_1232821	F055416	PVLRDAAARLATTMLRGRHTPHRPPARRLCALQESAAIRCNYPETYAYLKAKRDRHPIEDALEDYTQWTVMGEPLHPKITPIPKPGQPKPVEASSAIKKEETEEEYIRRRCEEFMHKSLSSRRGPGGKMFTIGGGGDAGVAYQVI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300031172: Metatranscriptome of Chrysochromulina tobin associated microbial communities from unialgal haptophyte culture, Seattle, Washington, United States ? P3_D6_32mM_2 (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences