Sample 3300017607

3300017607: Metatranscriptome of marine eukaryotic communities from Atlantic Ocean in f/2 medium with seawater, 15 C, 28 psu salinity and 679 ?mol photons light - Alexandrium fundyense CCMP 1719 (MMETSP0197) (SRX549004-SRR1294390)

Overview

Basic Information
IMG/M Taxon OID	3300017607 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128947 \| Gp0212254 \| Ga0187698
Sample Name	Metatranscriptome of marine eukaryotic communities from Atlantic Ocean in f/2 medium with seawater, 15 C, 28 psu salinity and 679 ?mol photons light - Alexandrium fundyense CCMP 1719 (MMETSP0197) (SRX549004-SRR1294390)
Sequencing Status	Permanent Draft
Sequencing Center	National Center for Genome Resources
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	9982860
Sequencing Scaffolds	25
Novel Protein Genes	36
Associated Families	22

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → Perkinsus marinus	2
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales	1
Not Available	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	6
All Organisms → cellular organisms → Eukaryota → Sar	10
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium andersonii	3
All Organisms → cellular organisms → Eukaryota	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Atlantic Ocean
Coordinates	Lat. (^o)	43.1	Long. (^o)	70.782	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000076	Metatranscriptome	2620	Y
F000103	Metatranscriptome	2242	Y
F000178	Metagenome / Metatranscriptome	1745	Y
F000241	Metagenome / Metatranscriptome	1481	Y
F000457	Metagenome / Metatranscriptome	1112	Y
F001141	Metagenome / Metatranscriptome	766	Y
F001154	Metatranscriptome	763	Y
F001544	Metagenome / Metatranscriptome	673	Y
F001618	Metagenome / Metatranscriptome	662	Y
F004927	Metatranscriptome	418	Y
F012120	Metatranscriptome	283	Y
F013498	Metatranscriptome	270	Y
F014819	Metatranscriptome	259	Y
F016530	Metatranscriptome	246	Y
F019947	Metatranscriptome	226	Y
F048326	Metagenome / Metatranscriptome	148	Y
F060925	Metatranscriptome	132	Y
F064735	Metatranscriptome	128	Y
F067800	Metagenome / Metatranscriptome	125	Y
F078185	Metatranscriptome	116	Y
F081975	Metatranscriptome	113	Y
F088941	Metatranscriptome	109	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0187698_100402	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → Perkinsus marinus	1550	Open in IMG/M
Ga0187698_100423	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Perkinsozoa → Perkinsea → Perkinsida → Perkinsidae → Perkinsus → Perkinsus marinus	1535	Open in IMG/M
Ga0187698_101251	All Organisms → Viruses → Predicted Viral	1132	Open in IMG/M
Ga0187698_101316	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales	1111	Open in IMG/M
Ga0187698_101513	Not Available	1055	Open in IMG/M
Ga0187698_101583	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1041	Open in IMG/M
Ga0187698_101663	All Organisms → cellular organisms → Eukaryota → Sar	1016	Open in IMG/M
Ga0187698_101664	All Organisms → cellular organisms → Eukaryota → Sar	1016	Open in IMG/M
Ga0187698_102787	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium andersonii	759	Open in IMG/M
Ga0187698_102958	All Organisms → cellular organisms → Eukaryota → Sar	732	Open in IMG/M
Ga0187698_103011	All Organisms → cellular organisms → Eukaryota → Sar	722	Open in IMG/M
Ga0187698_103194	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	694	Open in IMG/M
Ga0187698_103457	All Organisms → cellular organisms → Eukaryota → Sar	659	Open in IMG/M
Ga0187698_103581	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	643	Open in IMG/M
Ga0187698_103622	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	637	Open in IMG/M
Ga0187698_103817	All Organisms → cellular organisms → Eukaryota	614	Open in IMG/M
Ga0187698_103840	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	612	Open in IMG/M
Ga0187698_103876	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	607	Open in IMG/M
Ga0187698_104401	All Organisms → cellular organisms → Eukaryota → Sar	551	Open in IMG/M
Ga0187698_104412	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium andersonii	550	Open in IMG/M
Ga0187698_104415	All Organisms → cellular organisms → Eukaryota → Sar	549	Open in IMG/M
Ga0187698_104421	All Organisms → cellular organisms → Eukaryota → Sar	549	Open in IMG/M
Ga0187698_104510	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium andersonii	541	Open in IMG/M
Ga0187698_104919	All Organisms → cellular organisms → Eukaryota → Sar	504	Open in IMG/M
Ga0187698_104936	All Organisms → cellular organisms → Eukaryota → Sar	502	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0187698_100402	Ga0187698_1004021	F014819	VSPPSRHQAVAILAQECQLIIGVGGHWPAMSKDGTHQVSEHVQQVLGLDPKKDDQLLWIDEHASHVDLPADWVEFEDDQGKTAYYHEKTKRLTTQHPVITKYKGFIQKVRNFMEQMGTIGRKVKPHLAVIMNEVLNRIHKGLPPMTPELIERLAVLLYIDTNIEYTLTRRVKIAIESYAEEQYDIALQASQKADMDAFLGEVRLEQIRLEVLSKPDEVIMCTEIEGQPARVKCDQCKDFFSLEGFTATHSTGKRRNHTTVKCEQVVCSVYPNQLATCEIENTLFCDKAYEEVATKQPHLRQKRKKILGGLSCSQYPVRRADVLCEDCADLYSWEAFIELHRRGNRLRHVPLRLDPDGQLFRSGIACSPEETARLIDRARQAREGGPWLAFQDDQMNTYWYHLSDKVVTPSNPYI
Ga0187698_100423	Ga0187698_1004231	F014819	RHQSVAILAQECQLIIGVGGHWPAMSKDGTHQVSEHVQQVLGLDPKKDDQLLWIDEHASHVDLPADWVEFEDDQGKTAYYHEKTKRLTTQHPVITKYKGFIQKVRNFMEQMGTIGRKVKPHLAVIMNEVLNRIHKGLPPMTPELIERLAVLLYIDTNIEYTLTRRVKIAIESYAEEQYDIALQASQKADMDAFLGEVRLEQIRLEVLSKPDEVIMCTEIEGQPARVKCDQCKDFFSLEGFTATHSTGKRRNHTTVKCEQVVCSVYPNQLATCEIENTLFCDKAYEEVATKQPHLRQKRKKILGGLSCSQYPVRRADVLCEDCADLYSWEAFIELHRRGNRLRHVPLRLDPDGQLFRSGIACSPEETARLIDRARQAREGGPWLAFQDDQMNTYWYHLSDKVVTPSNPYI
Ga0187698_100841	Ga0187698_1008411	F064735	MEKHGLYFLDPKFIFFNADSIDDSVKPFIIPIVGLLLGASMMMFEQVKTVGKLVLYFGAQSFMNIYMGWVMRTSVTVPAGTYIETTNTTLTADLTGCPAGFALTAFQQVISFIVFMIFFASVYFTPYKYMPKPLNTRFEILCVIVFGCVFALNIALNNFSLGYINIGVNLIIRSCLPLSTDLSQRALAKIGLYPEKPWKLLELALMIVGVLCAGIFTGAKIMSTGKGSAQERSGMVLGVVACVASLFCGSLNLALAGVLGETKLNVYDTVAYMAIPATLFLAPIALFYTKEVPGEWGTVLGSSTTTDFQVLMATWYLNKKTICWLLLSGVFSFIYNIIQFSIVHTLSPSATAFGGNFNKAALVSL
Ga0187698_101251	Ga0187698_1012511	F001544	KIRVGILVGKDFDPVKKDTQWPDFPKRFILTQEEWGKYSVDVATALKMQQLHPDLLDIDIIPGKEVTQKRLQRNHVNLNFWYDVGVSMLHGDKKHVDEVMRCHKNPDCRLDPSWDYYDWVLCKPRYMEQCKKAGIPTIPTVVYKNGFDPSQCLKDVQKMQWDKFFVKVGHFSFFGAGAIHGKTEDFLGKRSKDMDDYAMANKKSKVFLLQPYTLKPNGEVFDEVRNFFVDGQWRYSVFTHGTDETDAGYYEEPDGPRKVACKELAEKVYQEVLKAATWQGKRQTPLLNRIDIGVVPKKGGDSLHKTDNTYFLNEVELIMTTWLDRYSPISVQDAMAQASVKHTLELLAGLLNAKKKVPDEANVRKAISPYSESYY
Ga0187698_101316	Ga0187698_1013161	F004927	GFRVDWNMPKSAPLSCVEAIVREAKRMDSTQPTTISYGTTSDPIRECSYDSLMAAVQLSIKEPWQVIEVDQTGCDVQDCTGYVQRKMKLTATGESVLERVTVNEEIGEVTYNKCDAGGRPSDVERVLAIHTPLRLEFYERSARSGLRVHWKAPFDIARDTFSKTVQLAKKIEKGSSDVVGLGLASKTITEASQDAVWKAMLFAMRNPAECGLKVTNVTVRDMSGYMQRSMCIVEKPGSPTVTDNIRVIESAQEITYRPVINNQESEEERVFAVRSDPLRMEMFCRRSKDEMRLQWTVPRSTAVGVFDATLMAAQRM
Ga0187698_101513	Ga0187698_1015131	F016530	VAILAQANLAQAAPSWHTLATWRLVLAIMSLSVPDALLSSGTPEGVSATVSLPEDAWDMLGLGVSDAMNEKQMQVLNGQVALMTSADYVASKKDSELELKEAYKQQWQYEAEQRLARIEAKKSPLERAGEGGMMKSQKFAWSKDGQKSFEWRKIYHALVGGVGGMPEGGLFTETVISPTAMRMYTDHRVMGAVVLPGVSHVSLMAATGSIGFPSPGGLANDWHMSIKETLFERPYIVNSGAELIAAISAGMDPSQVGGGGGGMQAAMLPVGVPMTYCRATGVGKERGQIKPTSDWAK
Ga0187698_101583	Ga0187698_1015831	F081975	MVFQMPETSTIVAGGIGGPLVYFTVTPFRNACTLGATNPTAGTMELYRQVFAKGFTRGWAGGIYPSAYACPTFISLGPAYHVFKSAFGVPGAVVLASVTESMILFGAETCNAQMAKNEKAPGTIKKIHPTYKPFGPGIGIHISRNILATAGLRIFCTPCTWFLERVSGTSNPLTTLGGDFAGNVISACLTAPVHQLYGFTVTTPELKEMSGAEKRSRMVQFMKDQYLVTENGRTRLSANVPRDLSMRAAYVATLYTLYSTLERTLIRVWPK
Ga0187698_101663	Ga0187698_1016631	F000457	VDVATALKMQQLHPDLLDIDIIPGKEVTQKRLQKNHVNLNFWYDVGVSMLNGDKKHVDEVMRCHKNPDCRLDPSFDYYDWVLCKPRYMEQCKKAGIPMIPTVVYKNGFDPRQCLKDVQKMKWDKFFVKVGHFSFFGNGAIHGKTEDFLGKRSKDMDDYAKANKKSKVFLLQPYTLKPNGEVFDEVRNFFIDGQWRYSVFTHGTDETDAGYYEEPDGPRKVACKELAEKVYQEVLKAATWQGKRQTPLLNRIDIGVVPKKGGDSLHKTDNTYFLNEVELIMTTWLDRYSPISVQDAMAQASVKHTLELLAGLLNAKKKVPDEANVRKAISPYSESYY
Ga0187698_101664	Ga0187698_1016641	F001544	VDVATALKMQQLHPDLLDIDIIPGKEVTQKRLQKNHVNLNFWYDVGVSMLNGDKKHVDEVMRCHKNPDCRLDPSFDYYDWVLCKPRYMEQCKKAGIPMIPTVVYKNGFDPRQCLKDVQKMKWDKFFVKVGHFSFFGNGAIHGKTEDFLGKRSKDMDDYAKANKKSKVFLLQPYTLKPNGEVFDEVRNFFIDGQWRYSVFTHGTDETDGGYYQEPDGPRKVACKELAEKVYREVLKAATWQGKRQTPLLNRIDIGVVPKKGGDSLHKTDNTYFLNEVELIMTTWLDRYSPISVQDAMAQASVKHTLELLAGLLNAKKKVPDEANVRKAISPYSESYY
Ga0187698_101763	Ga0187698_1017631	F000103	MKLPVSAVLFFAFSWSQASAVTPVQKVIQLLEGMMQKGKQEKHEEQVQFAAYKQFCDDTSVEKTRDIEEANEKMEKLRADIEKYTADTAMLTTEIAGHDEDISVWNGDSKAATKVRALEKTDYDAMHRDFSESVDALQRAIAVLKEQSHNRPQASLAQVSALNQLPLIPKDAKRAIELFLAQDPQSGLAVSAPEAAGYEFQSHGVIEMLEKLLDKFVGERTTLEKEEMNAKHAYDMLIQDLTAQIDQAAQDRTEKAETKAKKLQAKADATGDLTDTTSTRDADQTYLSDLTAT
Ga0187698_101826	Ga0187698_1018261	F064735	GAQSFMNIYMGWVMRTSVTVPAGTYIETTNTTLTADLTGCPAGFALTAFQQVISFIVFMIFFASVYFTPYKYTPKPLNTRFEIVCVIVFGCVFALNIALNNFSLGYINVGVNLIIRSCLPLSTDISQRLLAKIGLYPEKPCKLVELALMIVGVMCAGIFTGAKIMSSGKGTAEEKSGMLLGVVACVASLFCGSLNLALAGVLGETKLNVYDTVAYMAIPATLFLAPIALFYPKQVPGQWPQVLGTSTMTDFQILVATWYLNKTTMCWLLLSGVFSFVYNIIQFSIVHTLSPSATAFGGNFNKAALVSL
Ga0187698_102024	Ga0187698_1020241	F001141	MRGLACFAVLAALLAPMAAGLDAGLSFDATAAKNRPVSKVITLLKDMLKQLEKEAEEDEEVYDKLACWCKTNDREKTKAISDAEAKIEDLTTKIEELTAGSARLNTEIKNLDKEVAANQGSLDKATALRQKQLAEFNAEEKDLLESISALKAAITVLSKHHGGSLLQMPRSHMLSIAATLQHEMQKHSSLLAGVISPSERRAAQSFIQAPEDYFDATPTFKQSYAPQSGEIFGILKQMKETFESNLSESQKEEMANQKAYEDLKAAKEE
Ga0187698_102099	Ga0187698_1020991	F001141	SVRSHFGSSSRTAQFTPPLHCRSRALRPKMRGLACFAVLAALLAPMAAGLDAGLSFDATAAKNRPVSKVITLLKDMLKQLEKEAEEDEEVYDKLACWCKTNDREKTKAISDAEAKIEDLTTKIEELTAGSARLNTEIKNLDKEVAANQGSLDKATALRQKQLAEFNAEEKDLLESISALKAAITVLSKHHGGSLLQMPRSHMLSIAATLQHEMQKHSSLLAGVISPSERRAAQSFIQAPEDYFDATPTFKQSYAPQSGEIFGILKQMKETFESNLSESQKEEMANQKAYEDLKAAKEE
Ga0187698_102278	Ga0187698_1022781	F000241	RSHFGSSHFGPSHFDSASPDADRVTTVVVSAMSLRRPLLASVLAGAALVSLLRGSLSFVGPTGPHARGCHIAARVSAEYLERLGPKDADVPFKAVGGGAEHPVTFKKRPFGILRYQPGEGMKGAMTMEIIPTSRYPGDPQGQAFSSGVQSGWVVKSINGEDVLEADFGRIMDLLDDEVADPRFSKSTALALENQGGRIAEPAAAPLEVVFAEIPGYEGKFATLSQDGQDGFAR
Ga0187698_102474	Ga0187698_1024741	F000241	VDTVTTAVVSIMSLRRPLFSSVLAGAALVGLLWGSLNFVGPAGPHARGCHIAARVSAEYLERLGPKDADVPFKAVGGGAEHPVTFKKRPFGILRYQPGEGMKGAMAMEIIPKSRYPGDPQGQAFSSGVQSGWVVKSINGEDVLEADFGRIMDLLDDEVADPRFSKSTALALENQGGRIAEPAAAPLEVVFAEIPGYQGKFATLSQDGQDGFAR
Ga0187698_102475	Ga0187698_1024751	F088941	MSLAPSVYQVQGKWKHSSGGEIDIQPDATGKSVVIIHPTVGKQNLDVGKFCTPTGLDYFGFKGKLEGSTITWNNGVIWTKVG
Ga0187698_102787	Ga0187698_1027872	F013498	MCKEVGAYPEHCTCPTYVDSTDKTPGVMTWDELLQYMDSLSSWGEETVKEWKKQAASQLQWTKKAVRVVQVSKACMAEDAKHREMVQNKLAGVCTDMCKEVGAYPDKCSCPNYVDTTDKTPNVVTWPELLNYMDKVESQGAEALKHWTSQAAR
Ga0187698_102958	Ga0187698_1029581	F000178	MALLAVCIAQAALALASASQVESQGVLRHSKHSKHDADSADGFVRTLEFKHRLRICNAYPYGAAMDVYRGKSEKLTGETPMPYKTCRDFLAPLKAGDKLEFKVGDANAGTFSVSDLPNNDAVLFLVIHRHDTLSTAVSFESHVFANLLNAQVAIIDTFKGSSTVVPRIMDAKSVGKQSRSEELRFNSVVAVNPGVYEVELVGKDGEVR
Ga0187698_103011	Ga0187698_1030111	F001618	MWRPDAGPCVAQVAEWGSHPDDVEYMRLLKAMPKKILKRREIVCEDSALEKASQKQGKVHFSLCVWNLSEYSKSSGLGDEAASMVHVFYESKDERKVLNAFSSAGIDLESAEAVPVDPNSSLPHEQNIMYTKENLYLQDLYTWEEGAPMSADDLKSRFKMK
Ga0187698_103194	Ga0187698_1031941	F048326	HQSVAILAQGIDALLSLCSEMWLMGSLHRCFSLLAVLLGMCEAAKYIIGQTANSGAFEVHFDDDKRTLDLGNDCHPGKACPPVIIMSGRQVGTIDVNNCQEGVMYTFVNKGDIDAGVVVQHEGGLYGSKGIAQFGVGTCFCYKEGTLMCG
Ga0187698_103457	Ga0187698_1034571	F001618	RHQSVAILAQVRLQPPPLPFASPSFLPQVAMWRPDAGPCVAQVAEWGSHPDDVEYMRLLKAMPKKILKRREIVCKDKDLEKASQKQGKVHFSLCVWNLSEYSKNSGLGEDAASMVHVFYESKDERKVLNAFSSAGIDLESAEAVPVDPNSSLPHEQNIMYTKENLYLQDLYTWEEGAPMSADELKSRFKMK
Ga0187698_103581	Ga0187698_1035811	F060925	MLRIKKVEAVLKSAMADGVTNVMLINDEGALIAAARSEESDHTISAVLASIYSEYKEADRYVDPGSPSSLQSILFDCAAARVACMSFVQCTENTQILLCVCGDRKTNYGILWSKLELLKSSLECLGPIFTPSYTPMAGA
Ga0187698_103622	Ga0187698_1036221	F067800	MDKLMPALAGVTGLYVASKIIPVMYRWELIPGVGSPEYQAKASSIRYDHYTEGIIYSPYDTGGDPIREMPAASAGKMYLKQKGGGWKFASEM
Ga0187698_103817	Ga0187698_1038171	F019947	MVVDSLPEDKPKILFYAAMMWVQNFGFFLMYFMMFQSIPDPAGGECTNLRNWVGFFALDCFVESFVCVWMGMGGYTSDACMFPVMWILHLVVALPYVLCTVTIPLAIYSDDGSTCREHAGAPLYPLVPVYWTHASLFLVYVWMMLSITYFSFLKPTFFSSPYKAQNNS
Ga0187698_103840	Ga0187698_1038401	F012120	ICNPEAVKIMLDHIYEVEDGSCEEYNPATQEINKDVLRLSQNFRLPGLTERATQWMAKGLTTGNVVERLTICEDFSLAVLREKILEQLTCNKRALSEVAHSPQIMAYPKLMQALLQQAAAVSESEGPQPKKKTRRA
Ga0187698_103876	Ga0187698_1038761	F067800	MDKLMPVVGGMVGLYAASKIIPVMYRWELIPGVGSPEYQAKAARIRYDHYTEGIIYSPYDTGGEPIREMPAASAGKMYLKQKGGGWKFASEM
Ga0187698_104023	Ga0187698_1040231	F013498	MKSFALFAILPAALAARKMDTRSSACTAEDLAARSRLQNKFADICIDMCKEVGAYPEHCTCPNYVDTTDKTPGVMTWDELLKYMDSLSSWGEETVKEWKKQAASQLQWTKKAVRVVQVSKACVAEDAKHREMVQNKLAGVCIDMCKEVGAYPEKCSCPNYVDTTDKTPNVV
Ga0187698_104147	Ga0187698_1041471	F000076	RSHFGSSPFSPRCAFPRFPGKPKAAMAEEEGQEVIFTENTAPDREIWDEKGGLIKKGAAEIAERDQDHVPEVKVLTTLGMFAVPVTAETTVGEIRQKVQEWKPEYSLEQIELVCKDKDAWGPLFNKTSRPRDDDETVESLWSDWDIPRRMMQVALWIKEKNEETGEWESTFWKMLEESKCDDWSFQGHTI
Ga0187698_104401	Ga0187698_1044011	F001154	RSHFGSSLFGPSLASAASLCAFVPPPLPEMVKVTIGKPEDPWCEIDLTDEDVEDWKKGVDIAEEKLKEVLQLPPITIDNCHEREDGDLQWDEITFEEEVNGKYWHALIMSLHRVREDFIKKQRKMKHLDWYLTMKRTSDKRNPKYYV
Ga0187698_104412	Ga0187698_1044121	F013498	MIWNFVTEVGAYPEHCTCPNYADTTDKTPGVMTWDELLKYMDDLSSWGEETVKEWKKQAASQLQWTKKAVRVVQVSKACMAEDAKHRELVQNKLAGVCTDMCKEVGAYPDKCSCPNYVDTTDKTPN
Ga0187698_104415	Ga0187698_1044151	F001618	CVAQVAEWGSHPDDVEYMRLLKAMPKKILKRREVVCKDSALEKATQKQGKVHFSICVWNLSEYSKSSGLGDEAASMAHVFYESKDERKVLNAFSSAGIDLESAEAVPVDPNSSLPHEQNIMYTKENLYLQDLYTWEEGAPLSADDLKSRFKMK
Ga0187698_104421	Ga0187698_1044211	F001154	RSHFGSSSSQLSLRTVPFESARARATSGAMVKVTIGKPEDPWCEIDLTDEDVEDWKKGVDIAEEKLKEVLQLPPITIDNCHEREDGDLQWDEITFEEEVNGKYWHALIMSLHRVREDFIKKQRKMKHLDWYLTMKRTSDKRNPKYYV
Ga0187698_104510	Ga0187698_1045101	F013498	CKEVGAYPEHCTCPNYVDTTDKTPGVMTWDELLQYMDSLSSWGEETVKAWKKQAASQLQWTKKAVRVVQVSKACVAEDAKHREMVQNKLAGVCIDMCKEVGAYPEKCSCPNYVDTTDKTPNVVTWPELLNYMDKVESQGVEALKHWKSHAAL
Ga0187698_104873	Ga0187698_1048731	F000076	MAEEEGQEVIFTENTAPDREIWDEKGGLIKKGAAEIAERDQDHVPEVKVLTTLGMFAVPVTAETTVGEIRQKVQEWKPEYSLEQIELVCKDKDAWGPLFNKTSRPRDDDETVESLWSDWDIPRRMMQVALWIKEKNEE
Ga0187698_104919	Ga0187698_1049191	F001154	RSHFGSSLFGPSLASAASLCAFVPPPLPEMVKVTIGKPEDPWCEIDLTDEDVEDWKKGVDIAEEKLKEVLQLPPITIDNCHEREDGDLQWDEITFEEEVNGKFWHALIMALHRVREDFIKKQRKMKHLDWYLTMKRTSDKRNPKYYV
Ga0187698_104936	Ga0187698_1049361	F078185	MGGHFRLWHPKWWSRYLWGGVASINLFGFVADSQYGINRSKNPEVMWPWWHEIMRMKEDGKIPKDMPGYMLCKFRNEPEERWTAEKEEQFGEFMAALEEE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300017607: Metatranscriptome of marine eukaryotic communities from Atlantic Ocean in f/2 medium with seawater, 15 C, 28 psu salinity and 679 ?mol photons light - Alexandrium fundyense CCMP 1719 (MMETSP0197) (SRX549004-SRR1294390)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences