Sample 3300017299

3300017299: Metatranscriptome of marine eukaryotic communities from northern Puget Sound, Washington in Ciliate medium, 15 C, 30 psu salinity and 405 ?mol photons light - Strombidinopsis acuminata SPMC142 (MMETSP0126)

Overview

Basic Information
IMG/M Taxon OID	3300017299 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128947 \| Gp0212050 \| Ga0186338
Sample Name	Metatranscriptome of marine eukaryotic communities from northern Puget Sound, Washington in Ciliate medium, 15 C, 30 psu salinity and 405 ?mol photons light - Strombidinopsis acuminata SPMC142 (MMETSP0126)
Sequencing Status	Permanent Draft
Sequencing Center	National Center for Genome Resources
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	56031307
Sequencing Scaffolds	37
Novel Protein Genes	54
Associated Families	46

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	7
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	4
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium catenella	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	2
All Organisms → cellular organisms → Eukaryota → Sar	10
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae	1
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Isochrysidaceae → Chrysotila → Chrysotila carterae	1
All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Euglenida → Spirocuta → Euglenophyceae → Eutreptiales → Eutreptiella → Eutreptiella gymnastica	1
Not Available	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Hymenostomatida → Tetrahymenina → Tetrahymenidae → Tetrahymena → Tetrahymena thermophila	2

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)
Type	Host-Associated
Taxonomy	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated → The Marine Microbial Eukaryote Meta/transcriptome Sequencing Project (mmetsp)

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	USA: northern Puget Sound Washington
Coordinates	Lat. (^o)	48.608	Long. (^o)	-122.769	Alt. (m)	N/A	Depth (m)	1
Location on Map

Zoom:	Powered by OpenStreetMap^©

Associated Families

Family	Category	Number of Sequences	3D Structure?
F000007	Metagenome / Metatranscriptome	8691	Y
F000020	Metagenome / Metatranscriptome	6197	Y
F000076	Metatranscriptome	2620	Y
F000085	Metagenome / Metatranscriptome	2467	Y
F000103	Metatranscriptome	2242	Y
F000241	Metagenome / Metatranscriptome	1481	Y
F000342	Metatranscriptome	1262	Y
F000457	Metagenome / Metatranscriptome	1112	Y
F000665	Metagenome / Metatranscriptome	949	Y
F001051	Metatranscriptome	792	Y
F001154	Metatranscriptome	763	Y
F004726	Metagenome / Metatranscriptome	426	Y
F011080	Metatranscriptome	295	Y
F012119	Metatranscriptome	283	Y
F013530	Metagenome / Metatranscriptome	270	Y
F013765	Metagenome / Metatranscriptome	268	Y
F013862	Metagenome / Metatranscriptome	267	Y
F015656	Metagenome / Metatranscriptome	253	Y
F015657	Metagenome / Metatranscriptome	253	Y
F016241	Metatranscriptome	248	Y
F018935	Metagenome / Metatranscriptome	232	Y
F020699	Metatranscriptome	222	Y
F022342	Metagenome / Metatranscriptome	214	Y
F024727	Metagenome / Metatranscriptome	204	Y
F028813	Metatranscriptome	190	Y
F030973	Metagenome / Metatranscriptome	183	Y
F032814	Metagenome / Metatranscriptome	179	Y
F034059	Metatranscriptome	175	Y
F035313	Metatranscriptome	172	Y
F035320	Metatranscriptome	172	Y
F036715	Metagenome / Metatranscriptome	169	Y
F037231	Metatranscriptome	168	Y
F040638	Metatranscriptome	161	Y
F041571	Metatranscriptome	159	N
F044509	Metatranscriptome	154	Y
F046628	Metagenome / Metatranscriptome	151	Y
F049658	Metatranscriptome	146	Y
F051179	Metagenome / Metatranscriptome	144	Y
F052624	Metagenome / Metatranscriptome	142	Y
F054545	Metatranscriptome	139	Y
F073587	Metatranscriptome	120	Y
F076147	Metagenome / Metatranscriptome	118	Y
F082729	Metatranscriptome	113	Y
F087219	Metatranscriptome	110	Y
F094873	Metagenome / Metatranscriptome	105	Y
F098706	Metagenome / Metatranscriptome	103	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0186338_1001274	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria	2985	Open in IMG/M
Ga0186338_1001695	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	2733	Open in IMG/M
Ga0186338_1005028	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	1905	Open in IMG/M
Ga0186338_1007544	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Gonyaulacales → Pyrocystaceae → Alexandrium → Alexandrium catenella	1628	Open in IMG/M
Ga0186338_1010101	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	1424	Open in IMG/M
Ga0186338_1011729	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	1311	Open in IMG/M
Ga0186338_1012937	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	1239	Open in IMG/M
Ga0186338_1015206	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1123	Open in IMG/M
Ga0186338_1017270	All Organisms → cellular organisms → Eukaryota → Sar	1026	Open in IMG/M
Ga0186338_1018910	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	959	Open in IMG/M
Ga0186338_1019860	All Organisms → cellular organisms → Eukaryota	922	Open in IMG/M
Ga0186338_1020552	All Organisms → cellular organisms → Eukaryota → Sar	898	Open in IMG/M
Ga0186338_1021471	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	864	Open in IMG/M
Ga0186338_1022867	All Organisms → cellular organisms → Eukaryota → Sar	816	Open in IMG/M
Ga0186338_1024008	All Organisms → cellular organisms → Eukaryota → Sar	780	Open in IMG/M
Ga0186338_1024823	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi	755	Open in IMG/M
Ga0186338_1025268	All Organisms → cellular organisms → Eukaryota → Sar	743	Open in IMG/M
Ga0186338_1026092	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata	720	Open in IMG/M
Ga0186338_1026851	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	701	Open in IMG/M
Ga0186338_1026867	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Sporadotrichida → Oxytrichidae	700	Open in IMG/M
Ga0186338_1027177	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Isochrysidaceae → Chrysotila → Chrysotila carterae	692	Open in IMG/M
Ga0186338_1027778	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	677	Open in IMG/M
Ga0186338_1027847	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	675	Open in IMG/M
Ga0186338_1028171	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Choreotrichia → Choreotrichida → Strombidinopsidae → Strombidinopsis → Strombidinopsis acuminata	667	Open in IMG/M
Ga0186338_1028707	All Organisms → cellular organisms → Eukaryota → Sar	654	Open in IMG/M
Ga0186338_1030290	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Euglenida → Spirocuta → Euglenophyceae → Eutreptiales → Eutreptiella → Eutreptiella gymnastica	614	Open in IMG/M
Ga0186338_1031666	Not Available	583	Open in IMG/M
Ga0186338_1031670	All Organisms → cellular organisms → Eukaryota → Sar	583	Open in IMG/M
Ga0186338_1031775	All Organisms → cellular organisms → Eukaryota → Sar	581	Open in IMG/M
Ga0186338_1032110	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Suessiaceae → Polarella → Polarella glacialis	574	Open in IMG/M
Ga0186338_1032325	All Organisms → cellular organisms → Eukaryota → Sar	569	Open in IMG/M
Ga0186338_1032876	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	557	Open in IMG/M
Ga0186338_1032930	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Hymenostomatida → Tetrahymenina → Tetrahymenidae → Tetrahymena → Tetrahymena thermophila	556	Open in IMG/M
Ga0186338_1033191	All Organisms → cellular organisms → Eukaryota → Sar	551	Open in IMG/M
Ga0186338_1033894	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Oligohymenophorea → Hymenostomatida → Tetrahymenina → Tetrahymenidae → Tetrahymena → Tetrahymena thermophila	537	Open in IMG/M
Ga0186338_1034213	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	531	Open in IMG/M
Ga0186338_1035471	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	509	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0186338_1001274	Ga0186338_10012744	F032814	MDAAKVNAPPFPEDEAKMIRSTRIRVGRNLADFPLGPGLKRE
Ga0186338_1001695	Ga0186338_10016951	F087219	MGPKSPGLALKGWPSLYCFTLYMPSRYEGPLLAAALKEGAGIFSCDGYDVLSSEPDVLGVGKDGVKVEALHIPKIEVGVSQDGTAGNAKLFMAVWDKIIAGAKFRNFDWTIKVDPDAVIIPWRVRQHMKPHNGVNAYVVNCNKFPGSPNFPMMYGAVEIFSNKAMDAYAAGSWKCGQQLPWSSWGEDYYMTHCLDFLGVGRISDFGVLGDNLCTGANCADTFVGSFHPFKDIGAWMQCWGKATATGQ
Ga0186338_1001740	Ga0186338_10017401	F087219	MGENCMDSQCCHAVGAQCFTKSKYWGTCKTSCTTEPDPNDHNATWSCNAMGPKSPGLALKGWPSLYCFTLYMPSRYEGPLLAAALKEGAGIFSCDGYDVLSSEPDVLGVGKDGVKVEALHIPKIEVGVSQDGTAGNAKLFMAVWDKIIAGAKFRNFDWTIKVDPDAVIIPWRVRQHMKPHNGVNAYVVNCNKFPGSPNFPMMYGAVEIFSNKAMDAYAAGSWKCGQQLPWSSWGEDYYMTHCLDFLGVGRISDFGVLGDNLCTGANCADTFVGSFHPFKDIGAWMQCWGKATATGQ
Ga0186338_1005028	Ga0186338_10050281	F046628	MLGYESENRLKNLLVAVGDGERVLEASRQRLCNIRDFAPLALFERIDRDANGAITSYELNNFLRDHHVYTISESEAFNLVKFFDSDNDNRLSFQE
Ga0186338_1007544	Ga0186338_10075441	F028813	MAERLMQHMPKVSDLEEDLKAQEASAAKQDKYAEEGEVVESVNTRLKFSSDLVIQSEAFLKRWCPNRPKNAPTIIRLLPNVQEFMAIKALPVDERWMMLALSGAGSFDPKLDADPANPVYTQWVHESMTGNKLACVTAGKEFTWGANVPASTVVVTKSFAETTSVAGMLQYVGRAARRGLTTHGQAIFEREEDLNRIFASPDGLSTEALTMERYAQWWLSGGKKW
Ga0186338_1010101	Ga0186338_10101012	F015657	KFLNMLQEGQEILEGRFKIVKKLGSGAFGEIFKVEKKKTGELFAAKFEKATKY
Ga0186338_1011098	Ga0186338_10110982	F013862	VVPLQAVLLLLCIYKWSIDSPKPAKSTAASSSKDAPKQEDAPAPSILSAMLSLDVWLMLVPKALLFTYTQFFMNYIPQLLNVSYGFDHGQAATLGGVAQGGSVVGLLVVGNMVYKSLSQGGKVRLVGLLLVVCTLVPFALSLGPSVLPRLMVVPLTVLWGLAYALPFYIPPGEFAMQIGGKSATGLFSNLFDAAGFGVSAIWNPWASALAKDGDFRVVLLSQALFGAISLVGMPLCMYRXXXXPRWRPRRRGIKAPQGMTEPGSWQQSSAY
Ga0186338_1011729	Ga0186338_10117291	F087219	YWGTCKTSCTTEPDPNDHNATWSCNAMGPKSPGLALKGWPSLYCFTLYMPSRYEGPLLAAALKEGAGIFSCDGYDVLSSEPDVLGVGKDGVKVEALHIPKIEVGVSQDGTAGNAKLFMAVWDKIIAGAKFRNFDWTIKVDPDAVIIPWRVRQHMKPHNGVNAYVVNCNKFPGSPNFPMMYGAVEIFSNKAMDAYAAGSWKCGQQLPWSSWGEDYYMTHCLDFLGVGRISDFGVLGDNLCTGANCADTFVGSFHPFKDIGAWMQCWGKATATGK
Ga0186338_1012937	Ga0186338_10129372	F013530	MCEDGKTGDEFFDALNEGGDGALGKEKFTSFLTGLADLKLAEGQAEQLFDHIVGEAAELGKERFLELVRLYYKCLRQTVMSEDVSIKSKTVRRLDMNEVLECLEGPAKEEGAGVQRVRCQAVNDGAIGWVTIAGNQGTPFLEPGGNLLTCVKETLLTETPSLDSKTIRRVAVSEVIEVLEFTKKDGTLDIKRIKGKAKLDGATGYITVSGS
Ga0186338_1015206	Ga0186338_10152061	F044509	WFVHHLTSEVQERIAAAVVLPKLPVADHRVARGQRNTSDVAGKFYDEKVTCQACHVAGVDDLHLPEEKPATDKAKARRCYTNYKELFNVTCGPCDGVAGPYWGDSDDFFKPTDCLVVGTPEEIPENERIPPKLPPQFTVDVVGGSDRFGRTTNPINDTLPGPIAKIYGQIHGKWYMDAKPGADLWLLRHDTVYGSVTEDGTSIPFISPSLTEIHAQTAKQRTENVTGPMVSLIHGMPDWIPGGCTCIQDPVGVPDITATLATGMANMQYMGRIKLPELEYLKVPIELDHWANWFFHIFMDTNSSVPHFRQAPSRLASAYAGTAVYDNWIFEDPAIRDPDVWHRGIPTSPEIVGPDKGKMCMNTQKSPICANISQ
Ga0186338_1017270	Ga0186338_10172701	F004726	VALALGAAAWDLTAPSAFVGMPAQGPRAAATQMKGYRLDWMIEGKNGEEGLQTQDGYFVGEKGFEKSQGAQGLRYRMRPTAEEYKKGIEVNGLMQQFGPVKIKLGEAFGGTANNPALRALKKKIFSEGITDPKKVEENEYWLQRYGCKRWSAPYVDQSQGLATTWLRGLAAWSAYDPLKEERGVSWFEADYGKPWLQKYVGTKIAGWVTAEQVEKEYATGKLLPPAPKK
Ga0186338_1018330	Ga0186338_10183301	F000103	RIAGVGGSHRREAVGAPGAMKCVMHLLLMLSPAVFLAPGAAAEKVTPVQKVIQLMEGMMTKGKQEKHDEQVMFAAYKQFCDDTTVEKKRAIKEAEERIDVLKADIEAYTAKAAQLTKEIAAHDEDISVWTGDMKAATKVREMEKADYDALHKDYSESVDALERAIAVLKKQAYDRKQADSLVQLQSLSMIPNDAKKAIEAFLQQDPDEGLAVSAPEAYGYEFQSHGVVEMLEKLLDKFISERTALEKEEMNTKHSYDMLMQDLTAQKNQAIQDRTEKAEFKAKALQAKADATGDLEDTTTTMEADKKYLADLMATCEQKATDFESR
Ga0186338_1018910	Ga0186338_10189101	F087219	HESKCCHSIGAQCYRKNEYWASCKPSCSTEPDPEDNNKTWTCDELGPRSWGLALKGWPSLYCFHVMRVTGYEPNLTKAQLNASAGIFACDGYDLLADGVLSLGFPPGKTDKKDEVVTIESTKGIEVGVSQDGTAGNAKLFMKAWDTIIANGRFRDFDWTIKVDPDAVLIAWRVRDHMRAHVGESVYVVNCNKFPSSPNFPMMFGAVEVFSAAAMNAYAAGSWKCGQQLPWGSWGEDYYMTHCMDFLGVGRIGDFAILGDNMCTGANCADTFVASFHPFKDIGSWFQCWGQATAPGGPPST
Ga0186338_1019860	Ga0186338_10198601	F098706	PYQSVPSRSLAMLSVSFFALAANRAEVSTGNLRGENKFDNLKATWDKSVSIGDFKTLVKAKYDYNANRDFLKEVSISGDLIEAGNADDVGVGYELTRDFSNRNTNVRLTATSRGYSLSAEYDPNEQLREVGVSREVEVGDYKVDVQPTWLVKAKAARVKLISALNNGKDRVSAQFDYDVDGQQAKDVELGFERTLEEGKVLSASFRPDKSDLEVSLEDSTFESGATWTATANVALDSDPSNLLDAARVTLKRSWGW
Ga0186338_1020552	Ga0186338_10205521	F000342	MSKPYSTFAAPRAGAGAGQAMGMDARAPGSVFTPGKRRRINLVAICINIFVPWFAFAALFAAQSFSLHYQRPSLVWFLVVLGFGCVGVAGFLAVRTKQRERDPMWYTFATLALLVAVISAAVFGNMNFWYNMQPFYDIENLNEYPSVNPAREKGQQLMDAGRVYFADGAGIDMSKAMGFKNLDLYCVAPIVHGEEQLASYDFWAVGINCCSGVSSDFRCGEFNNPHARSGLRLMRDDQRPFFRLAVQQSEAAYNIKATHPLFFYWMQDPVAE
Ga0186338_1021240	Ga0186338_10212401	F000103	AHAASSSAKVTPVQKVIQLMEGMMANGKKEKHDEQVMFAAYKQFCDDTSVEKKRAIKEAEERIDVLKADIEGYTAKAARLTKEIAEHDEDISVWTGDMKAATKVREMEKADYDALHKDYSESVDALERAIAILKKQAHDRKQAESLVQLQSLSLIPNDAKKAIEAFLQQDPDEGLAVSAPEAYGYEFQSHGVVEMLEKLLDKFISERTSLEKEEMNTKQSYDMLMQDLTAEKNQATQDRTEKAESKAKALQAKAAATGDLEDTTTTMEADKKYLADLMATCEQKATDFESR
Ga0186338_1021471	Ga0186338_10214711	F011080	RALLAGAWKLPPLGSLAIRPPALLGNMPSALKARKDKPSVAEMRAQLEALRKPPARTMEAVFDKYHQLCLQSDPVKKEIEVNEPDVNWKALVMTLPQPQNSEVLGCGIRKILLKETECVYAGVYRFHIVRRDGSQKSFEFRDAYDDPYHTYKDKSFHHDVDTALRAAVLPQLIQYKEMLSKDSQMELVSHISGIALPWERAVVQHFPVTFQMLVDAFLNENQLKLDQIKLEFCEDHAYRIKDPDLLDKWRVFHRSQANYRIISTDEAMEQDHL
Ga0186338_1022420	Ga0186338_10224201	F082729	MKAMKAATKAKKAPVAMKTKSVAKKTATAFGLKGKVIAKKGAPMKKLRIGVLVGKDFDPVKPGTHDPNYPKKLILSEDEWGKYQVDVSTALKMQELHPDLLEIDIIPGKEISEKRLKKNHVNLNFWYDVGVAIMSGKGKAHVDAVMKVHKNPECRLDPSWDYYDWILCKPRYMEQCMKAGIPMIPTVIYKNGFDAAQCLKDAQKKGWEKFLVKVGHFAFFGEGAIHGKTVDFLSTRAGD
Ga0186338_1022570	Ga0186338_10225701	F049658	QLPLQRPDRGARWPSVPEANAINITAGMIEGAAEPAPTAPGALAPAAESGSSGPSPQPQTLTRTFSINSACFRVHWTVDARKLRGNDKQAVSPPFELSFGSQFPNVTFKMMIYPKIVNDSKGGASFKKAKGRGYVQLKCEAELSEAIANVQFRISIGSGDRQEDPRGPVSHNFSSSAVCGLPKDLEEWDFQSVVDQESMTFVVCLEIVPKAAGR
Ga0186338_1022867	Ga0186338_10228671	F000457	EGAIHGKTADFLSTRAGDLKAYAKANKTSKVFLMQPYTLKPNAEVFDEVRNFFIDGEWRYAVFTHGTDGSDAGYYMEPEGPRKDACKALAERAYQQVLKTCKWQGKPINPLLNRIDIGVIPAKGGDSKHRTDNTYFVNEIELIMTTWLERYSPLSVHDCMAQASVKHSLELLVGLLNAKKRVPDEANVRKAVKVLSQRLGLKHLKIKA
Ga0186338_1022913	Ga0186338_10229131	F037231	GLMTFKDWSTGSAMTVRAKNVTNPGGVNLALQDDLDAQQKQFVGGQHLRYTGTLKFFTPRHGFGYVVMDPGYDVDPGVPSELRVESSEVNAGGQQPQFMENLAVEFGIWRTLRAAYKVYNMTLPGGHPLTQDALENRISMGEQSYVGEVAIWNWRAGWGFVLAPPTAPLPQRVLQKLAQQQATARQRGKQITQERMMYFRRLDCQPGMNMQKGTPVQFQLYVDDKGAGACELRPV
Ga0186338_1023065	Ga0186338_10230651	F000241	MASSKQSIRRPILAALIAVSAVACLVSNLSFVGMPAQSVRSSRVAARVSADYLERQGPKDSDAPFTATAATGPEHPVEFKKRPFGILRYQPGAGMKGAMAMEIIPASRYPGDPQGQAFASGVQSGWVVKSINGADMLNEDFGKIMDLLDDEVADPRFSKSTAVAMQAQGGRLAEPAEAPIAVTWAEVPGFVYKGAALKQDGQDGFAR
Ga0186338_1023965	Ga0186338_10239651	F000241	WLKPSSADRGLIPSRNLGAMVASSKQGARRPLLTALALGGAALFASTAFVGTPAQSVRCSRVAARVSADYLERQGPKDSDAPFTATAATGPEHPVEFKKRPFGILRYQPGAGMKGAMAMEIIPASRYPGDPQGQAFASGVQSGWVVKSINGADMLNEDFGKIMDLLDDEVADPRFSKSTAVAMQAQGGRLAEPAEAPIAVTWAEVPGFVYKGAALKQDGQDGFAR
Ga0186338_1024008	Ga0186338_10240081	F012119	LKSFCCEPACRGPGEGLHRVEGTSRLVGPWAARGSPPEPPGAMSFAESLSKIVKTKKAEVSGREELANKWTEYEKELISQAVELFKVRCTREAEMQKCEATVSFEVLSREIENFPKRVLTDSTYFVDSWGDGVSAESWFYATRGLNASWSAGAPVLFAEVLQGMLPKFVETVKELGFSSCNHEAGTWKVSVAWPSPEEQPSKKRKKHRD
Ga0186338_1024823	Ga0186338_10248231	F024727	MVTAADLVGWYSLSWKGGAFEVCLRPAGYFFCSKFQAPARWELVDNVIRIDWAKFGRYELTVDAATKSMTGNAVPKNEEDPGNWRKAEFVRPLSPVEALLIGDGAGSEWDFQWSDGHFPVQFKADGYNHFKCDEFPAHAHWSLSEDTLKINWAQYGNYELKISADSKTMEGGPIGGDWSSDWRKASFTRNLIDNKVMEACEHH
Ga0186338_1025268	Ga0186338_10252681	F040638	DKIIKKQRFRNYDWTLKVDPDAVLHPVRMRAHMKGHNGENVYVVNCNKVPGSPNFPMMFGAVEVFSNSAMDAYAAGSGKCGKDFWPSWQQWGEDYFMTHCLDHLGVGRISDFNSLGDNMCLGAHCEDGAVAAFHPFKTVGDWMGCWNIGKR
Ga0186338_1026092	Ga0186338_10260921	F094873	SGAWPRDEQPMPEDKRQIVGTKIRESLERSKETWKLFCDTDGDRRPSPFTKIAYSLCPQAIVPLHLNKGDLDRTETMLGVLHELRETEGINTQVLMIVWNFVKSMKDEPLQHGSLQIPFTPSKVSLDILDACSKRVWKVSQELPGLFVHDGASEADFVSNTTCVLRQLADNVIKPSEELGMPFVQMVDQLTASGKKQMKFRSGPEGVEYQAGDSVIHGVDEAVRFIEEKFEAMALDK
Ga0186338_1026851	Ga0186338_10268511	F073587	SDFEAQVTSQLQVMSQDIEKKMAFLASAPRGTGEGGAPVGMDSYAHDLDSVKYDIGELKDMVGAAKSDTAHVKRIVLACERDMEDFTAAMDAVNVDLDEMRARVDSTHSIITSRQRVEATVTAEISTMRLDMGDMQEALKAHDAWMEDVSQSLQEAHERCHQLSEDTSELREQTQAKLDAKTDITSWNDMNDDVDSSIKTVRDMASALRLEVDSRRRKVDESLNQIRSEAQQL
Ga0186338_1026867	Ga0186338_10268672	F052624	MIYANMNSKEMYVFDKEGQWHDEGIDHEALSMEKTYNETNWYDEFNVHNF
Ga0186338_1027177	Ga0186338_10271771	F030973	SAPLPNDNTSVGMLQFKPDGFQYQKRMQGDWNNGMLGSRNYSAVKLEEKNIWKTNVLYKTSAKEALKGHQPWDVPKQYAKGIPPNYENMDHALRHKSVYLGFAGN
Ga0186338_1027778	Ga0186338_10277781	F013765	SGEKGAAKRVLGRVQDAEKSRLATAEKRFGLTWNELHAYKDKMLFPLLPTCMAVEELPKDICLCETAFRGLDRCLEQGMLTERATEPYARMQICKPHWIRFVKCVKRRDELVLRGVRKWEQGYFTSLDEPSQREYMDDIDTKMRYFLYAASHSSDESKKIRLESNAQHCAIRQASLMNPRQEKASQGGASV
Ga0186338_1027847	Ga0186338_10278471	F035313	SGRPCPPAPPAPRSAAVPLAMALEVPSGYENGCGWDFDAKAAEKDGKMKKDDPIQEHYKKTGLFGSITGAFGDKKTMYCHHLTQSGEPAARAAKAAGKSFKSADEVWAFIGRPACCGRLAYDRASGNLKCGQVVKADHDNTCNEETCPFIASGLSCPTPAWALK
Ga0186338_1028130	Ga0186338_10281301	F000020	MLQMRQQPEAPEIFDEPYQGMQAENGGIVGMLEVVEADFARLEAETTTAEAVAVKEYETFMTDSKVDKASKSKDIDHKTAKKQDQEQALTTKKSDLEGTQKELDASLAYFDKLKPSCVDAGVSYEDRVAR
Ga0186338_1028171	Ga0186338_10281711	F035320	GFLQVASAKAPPSPRAWGLKTGVKMGTDEWNALANPNFEGTIDKGHKEAMQTFGETEKGQQDEAQYGVLALLELIMSDFASLEADTSAAEAASQEAYERFMVESKKSKATKDRKIEMNNADKAAAELKMQEDIKELKATQDELLAADRYHAKLVPQCIDQGMSWEERVAARQAEVDSLKEALKILSNPDIETSA
Ga0186338_1028707	Ga0186338_10287071	F000665	QGFFDGHPMVNWRHENLMRLFFRALRPFVKPGGVVKVASNMGAVGVRYSYIVGSAIENEFIHSETMQFLEWHLHRYGRSYGDKRDIYKRPDAKNNESYNAQRAEADMVYCFTYAPTGQQIGKQQIRLPPTYKTLMACTDGPFKSLTGPGKTALAKQLHKRFVTEVSGTHVG
Ga0186338_1030268	Ga0186338_10302681	F016241	TMSYDEGMDAARARCGGAGCALIVNPPGHRTVHQFHIHFVHYAGYGASLKMRLEDRICGTLGWHAGGLPCHGKAAYFPGFPGVFSAAMTGGGIHHASVIAWPASCGGRGTIVELAYGCSIEHQIRGDYDPRRR
Ga0186338_1030290	Ga0186338_10302902	F022342	SRVGKSAPTVAREPSDMPVISEQADKPKIVFHAAMMAIQNFGFFTMYFDIWGQTPHGAACDDTRFAVGFMAMTCFCVAFLCIGMGFGGYTDDATVFTVYWFTHLAGGLCYIACTILVPLARFSDNGEDCAALNPVNGERIKTVYIMHAALFMVYVFGMLSITYFSFLKPTFLK
Ga0186338_1030331	Ga0186338_10303311	F000007	HQYSIHPPPPVPSHHPSVAMSRMIAVVFVAAAAIVAGVHTRQHAPEDELAKEMTHDLEMNFNKIAPFGKEDTAKELQDHAAKTQDTLVDAVENAEVAEIKRAVFRALTRLRAATIKEFDTIARLETQAIDAYNDAHHYRAENPLAHLHEDEAPVETDKLKSFH
Ga0186338_1031279	Ga0186338_10312791	F000085	RFGLKRRRTFAPPRVTSTLCAMAPSAATWVAALTGAAAQNWPGCQEQNSVIRNAGQALFANLQGYGATIGCFLDDCMSSDKFVASEIESCAKVCYSLPECTWWVWGTEEGEQKCWFRTGDAGREAGEGWISGGKGCHPPGTTAMPLGNAECWAENFGYENCCEAQFGPNGNAQCWDGVYNYDRCCFPKEEL
Ga0186338_1031666	Ga0186338_10316662	F076147	MSQSAHSAGALTSSSLGLDGPIVASNLARGVASRGASLLLLVPVLLATVATERMRLVAAFSLSLSSLRHCH
Ga0186338_1031670	Ga0186338_10316701	F001154	ASAARPPFSPAPSPSRRTRSLAAMVRVIVGKPEDPWCEIDITDEDVEDWKKGVDIAEEKLKEVIQLPPVTIENCHEREDGDLQWDEITFEEEVNGKYWHATIMALHRIREEFIKKQRKMKHLDWYLTMKRTSDKRNPKYYV
Ga0186338_1031775	Ga0186338_10317751	F034059	GPRKDACKALAERAYQQVLKTCKWQGKPINPLLNRIDIGVIPAKGGDSKHRTDNTYFVNEIELIMTTWLERYSPLSVHDCMAQASVKHSLELLVGLLNAKKRVPDEANVRKAVKVLSQRLGLKHLKIKA
Ga0186338_1032110	Ga0186338_10321101	F001051	MGNTLATDTIPVLVTMVDVHNPKAQDQFYFCNVSSGGASTKVIGRSQTLSVEVGITTVLSVTVYECPEPVFTPETARCLGLLRIPIERLAERYSSGIFQQWFNLDTRTDPRLPAGDPQQLVSKFEQSYTDAVADVYQPKICISVIGSAFEVQRGGRQTC
Ga0186338_1032225	Ga0186338_10322251	F000020	VAQALTVLKEFYEKAGDATALIQQEPEAPEIFDSPYTGMQSENGGVVGMLEVIESDFARLEADTKSAEAVAQKEYDTFMTDSKVDKSAKTKDIEHKTAKKQEESQALTVKNEDLEGTQKELDAALAYFDKLKPSCVDAGVSYDDRVGRRKEEIESLQEALRILNGEDI
Ga0186338_1032325	Ga0186338_10323251	F020699	AENLDAIQKAKEGRAAVAEAITIMKSFYGKAARAKVLLQRESPVDADTAGAGFEGAYRGKQTASVGILGMLEVVESDFDRAVRHTTEAEKKAHAEFTEFEQASKADIAGKETKKKLDEEDLAATESAIESKMGDMKDNMDMLDAALKTLQELKPTCIDSGMSSADRVAKREEEVKALKKALCILDENDV
Ga0186338_1032876	Ga0186338_10328761	F036715	MPESMEISDAAKSGDGSVNNVGIKMTGKFQCPDCSQKFDSVKAKELHWKFIHDPTRHQED
Ga0186338_1032930	Ga0186338_10329301	F051179	IMANLPKYNDKDFRNEGHEVDFDLKRVFDIPSIEQMIFFYVNFDKCRKEIMRYEDKRATTSSAKRHPKESKAEALDVLRCHSKNLSFEPVCLEPFNDARECLFKMDGQMRVCEPELHLFEECVHDPRSFAKFQAMATPVQQQPKNYFSTVIRKNYFY
Ga0186338_1033191	Ga0186338_10331911	F054545	EIPLGDPICKVRAGWQCSAYITESARPIICGGVRAEGPSIQDMQAAGEGEEGQAPELMKGGGPQADANVMDMVSTTGVEVMTDVVVEAAVGEAHGLLVCYDGAIRGWGYNRQKQAIGDETEDTFVKPAFVEDMPEGFKGLSVAVGGAQSYAILKPPGA
Ga0186338_1033771	Ga0186338_10337711	F041571	ELEQGLTGVRQALGVLRSYYGSGAAAAMLQDGQSLGEAMQQPALPESHSKATGAGSNIIGILEVVESDFAKNLAAEETLEADAASEHEKTTQENAVTRAMKEQDVKYSTQEYKALDKGGAEMTADRETSDTELSAVLDYYAKIKDRCIAKAGTYEERKKRRQAEIAGLKEALTILEDET
Ga0186338_1033894	Ga0186338_10338941	F051179	KHYIMANLPKYTDKDFRNEGHEVNFDLKRVFDMPSIEQMIFFYVNFDKCRKEIMRYEDKRATTSSAKRHPKESKAEALDVLRCHSNNLSFEPVCLEPFNDARECLFKMDGQMRVCEPELHLFEECVHDPRSFAKFQAMATPVQQQPKNYFSTVIRKNYFY
Ga0186338_1034213	Ga0186338_10342131	F018935	TNKYSYYDYTKQYNSRFLAKYQSHTHYWAGRGSNFLEILRLKAVRMKSNRNWMWFDVRYGTKFLYIFYMPQLFFLTASYLLTPVWRRGDERYHLRFADDGIDDIDENEPFVTYQLRKKPLTRRKYSDAVKLIYNGEEEYDYISEQPQRYR
Ga0186338_1034799	Ga0186338_10347991	F000020	GDATALVQQQPEAPAIFDSPYRGMQSENGGIIGMLEVIESDFARLESDTRASEVAAQKEYDTLMTNSKVDKAAKSKDIEHKAAKKQDETQALTVKHEDLQGTQKELDAALAYFDKLKPSCVDAGVSYDDRVGRRKEEIESLQEALKIISGEDIA
Ga0186338_1035159	Ga0186338_10351591	F000076	RPSLAGAMAEEEGQEVIFTENTAPDREIWDEKGGLIKKGAAEIAERDQDHVPEVKVLTTLGMFAVPVTAETTIGEIRQKVQEWKPEYSLEQIELVCKDKDAWGPLFNKTSRPRDDDETVESLWSDWDIPRRMMQVALWIKEKNEETGEWESTFWKMLEESKCDDWSFQGH
Ga0186338_1035471	Ga0186338_10354711	F015656	KMKVFPEYFDFGQFEMGRENMHTIKRPYIGFSMNFNFQDYNANIKLQCVHWHRLVKACANTEGYFDMLKNIRCMEATEYFKQCLQLNSFFAYHKKYYPNEYYHSEYWRVSPHYDNVFVET

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300017299: Metatranscriptome of marine eukaryotic communities from northern Puget Sound, Washington in Ciliate medium, 15 C, 30 psu salinity and 405 ?mol photons light - Strombidinopsis acuminata SPMC142 (MMETSP0126)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences