Sample 3300011918

3300011918: Mine pit pond microbial communities from Vermont, USA - 2S

Overview

Basic Information
IMG/M Taxon OID	3300011918 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0118613 \| Gp0137480 \| Ga0120090
Sample Name	Mine pit pond microbial communities from Vermont, USA - 2S
Sequencing Status	Permanent Draft
Sequencing Center	University of Vermont
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	60847604
Sequencing Scaffolds	44
Novel Protein Genes	57
Associated Families	55

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2
Not Available	13
All Organisms → cellular organisms → Bacteria	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1
All Organisms → Viruses → Predicted Viral	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter → Campylobacter coli	1
All Organisms → cellular organisms → Eukaryota	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Mine Pit Pond Microbial Communities From Vermont, Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Geologic → Mine → Unclassified → Mine Pit Pond → Mine Pit Pond Microbial Communities From Vermont, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → mine → alkaline water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	USA: Vermont
Coordinates	Lat. (^o)	43.727094	Long. (^o)	-72.425964	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000843	Metagenome / Metatranscriptome	864	Y
F001515	Metagenome / Metatranscriptome	679	Y
F001787	Metagenome / Metatranscriptome	634	Y
F001937	Metagenome / Metatranscriptome	614	Y
F002597	Metagenome / Metatranscriptome	544	Y
F002986	Metagenome / Metatranscriptome	515	Y
F002995	Metagenome / Metatranscriptome	514	Y
F003268	Metagenome / Metatranscriptome	496	Y
F003539	Metagenome / Metatranscriptome	480	Y
F003658	Metagenome	474	Y
F003784	Metagenome	468	Y
F004865	Metagenome / Metatranscriptome	420	Y
F006623	Metagenome / Metatranscriptome	368	Y
F009137	Metagenome / Metatranscriptome	322	Y
F010602	Metagenome / Metatranscriptome	301	Y
F011143	Metagenome / Metatranscriptome	294	Y
F013252	Metagenome	273	Y
F014503	Metagenome / Metatranscriptome	262	Y
F018653	Metagenome	234	Y
F019134	Metagenome / Metatranscriptome	231	Y
F020885	Metagenome / Metatranscriptome	221	Y
F023061	Metagenome	211	Y
F025439	Metagenome / Metatranscriptome	201	Y
F025485	Metagenome / Metatranscriptome	201	Y
F029726	Metagenome	187	N
F031035	Metagenome	183	Y
F031456	Metagenome / Metatranscriptome	182	Y
F034856	Metagenome / Metatranscriptome	173	Y
F035630	Metagenome / Metatranscriptome	171	Y
F035651	Metagenome	171	Y
F035740	Metagenome / Metatranscriptome	171	N
F038999	Metagenome	164	Y
F039012	Metagenome / Metatranscriptome	164	Y
F039134	Metagenome / Metatranscriptome	164	N
F041075	Metagenome / Metatranscriptome	160	N
F048001	Metagenome	149	Y
F051077	Metagenome / Metatranscriptome	144	Y
F052871	Metagenome / Metatranscriptome	142	Y
F053252	Metagenome / Metatranscriptome	141	N
F063624	Metagenome	129	Y
F066485	Metagenome / Metatranscriptome	126	Y
F066525	Metagenome	126	Y
F066716	Metagenome / Metatranscriptome	126	Y
F067678	Metagenome / Metatranscriptome	125	N
F069784	Metagenome	123	N
F071961	Metagenome / Metatranscriptome	121	Y
F072327	Metagenome / Metatranscriptome	121	N
F074405	Metagenome	119	Y
F076022	Metagenome / Metatranscriptome	118	Y
F079990	Metagenome / Metatranscriptome	115	N
F085169	Metagenome	111	Y
F086659	Metagenome	110	Y
F095454	Metagenome / Metatranscriptome	105	N
F096715	Metagenome / Metatranscriptome	104	N
F101168	Metagenome	102	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0120090_100063	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Freshwater phage uvFW-CGR-AMD-COM-C440	39988	Open in IMG/M
Ga0120090_100071	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	37052	Open in IMG/M
Ga0120090_100074	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	34566	Open in IMG/M
Ga0120090_100421	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7659	Open in IMG/M
Ga0120090_100793	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5453	Open in IMG/M
Ga0120090_100939	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4995	Open in IMG/M
Ga0120090_101062	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4625	Open in IMG/M
Ga0120090_101205	Not Available	4342	Open in IMG/M
Ga0120090_102212	Not Available	3026	Open in IMG/M
Ga0120090_102416	All Organisms → cellular organisms → Bacteria	2875	Open in IMG/M
Ga0120090_103097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acIB-AMD-7	2464	Open in IMG/M
Ga0120090_103825	Not Available	2147	Open in IMG/M
Ga0120090_104334	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1964	Open in IMG/M
Ga0120090_104383	All Organisms → Viruses → Predicted Viral	1948	Open in IMG/M
Ga0120090_105155	All Organisms → Viruses → Predicted Viral	1734	Open in IMG/M
Ga0120090_105174	Not Available	1732	Open in IMG/M
Ga0120090_105202	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
Ga0120090_105909	All Organisms → cellular organisms → Bacteria	1563	Open in IMG/M
Ga0120090_107553	Not Available	1286	Open in IMG/M
Ga0120090_107946	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Epsilonproteobacteria → Campylobacterales → Campylobacteraceae → Campylobacter → Campylobacter coli	1235	Open in IMG/M
Ga0120090_108135	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1209	Open in IMG/M
Ga0120090_109694	Not Available	1051	Open in IMG/M
Ga0120090_110240	All Organisms → Viruses → Predicted Viral	1002	Open in IMG/M
Ga0120090_111322	All Organisms → cellular organisms → Eukaryota	919	Open in IMG/M
Ga0120090_112110	Not Available	869	Open in IMG/M
Ga0120090_112491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Escherichia → Escherichia coli	845	Open in IMG/M
Ga0120090_112763	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	830	Open in IMG/M
Ga0120090_113191	Not Available	808	Open in IMG/M
Ga0120090_113391	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	798	Open in IMG/M
Ga0120090_113775	Not Available	780	Open in IMG/M
Ga0120090_115169	Not Available	722	Open in IMG/M
Ga0120090_115554	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	707	Open in IMG/M
Ga0120090_116113	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	686	Open in IMG/M
Ga0120090_117087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
Ga0120090_117629	All Organisms → cellular organisms → Eukaryota	638	Open in IMG/M
Ga0120090_118140	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	624	Open in IMG/M
Ga0120090_118956	Not Available	602	Open in IMG/M
Ga0120090_120539	Not Available	566	Open in IMG/M
Ga0120090_120630	All Organisms → cellular organisms → Eukaryota	564	Open in IMG/M
Ga0120090_121563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	546	Open in IMG/M
Ga0120090_122018	Not Available	536	Open in IMG/M
Ga0120090_122258	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	532	Open in IMG/M
Ga0120090_123648	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	508	Open in IMG/M
Ga0120090_124080	All Organisms → cellular organisms → Eukaryota	501	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0120090_100002	Ga0120090_100002631	F029726	MFQPIPKTLIPTLIKARVPVWLLVGALAAQYAINSASQSIEPNCRMNVQRVHQSTYSLEFKNLSEAKLKISTLCDVPQAYTSLTVKFEEVLPNGGNNVVKTVRNIVARPKPERENYVLIENLTAPCNGKGQAEYIGKAFGQIHLKDNRTVPVSGESDKPMPLICRISAK*
Ga0120090_100063	Ga0120090_10006314	F034856	MTQYIFTTPTVEETPMGGGVLFSRYKMTKGVSVLRVNGIYSSYRYPAQTDIANASEFYLGGTKTVITQETADALTAQGYGEYITPA*
Ga0120090_100063	Ga0120090_10006316	F067678	MATNYEYDDEDDDTSTDTGINQLRKVNRALEKRAKELEQELLGLKSQTRQRTVKDVLQAKGLNPKIAAFVPQDIDTSEEAINQWITEYGDVFGATTQAESQPTQQSQDVTAQARINNMVATGQAPSLDQDSMSRVLQAKSRDELDALLGL*
Ga0120090_100063	Ga0120090_10006321	F066716	MAIEASKNFKVSATGGDGSSGQAAQYAAGIDNAGDFYELQTQAPMSKSGVQLPNRGNPVAPKMSVGDIVPLDAPTLYPEEGVDTGAALGPNAGQEVMAAPSMLAAQNNEDIAALAASLPFYAKIAESPQASNATRNWYRYIRSQVQGQVQ*
Ga0120090_100063	Ga0120090_10006322	F079990	MKKASALKKGYSKKPANQGTAGKPNYQKPMTAKKASSKGGKVYQTNAPSGTRGSKNK*
Ga0120090_100063	Ga0120090_10006343	F001515	MAKNSSFDLDFGYGRKGEQLVEELLTQGKTVEVKRDRKWWVTNNLYVEVECWYMKSKSWEKSGVMVTEAAYWAFVLEQGVLMVPTSHVLYAIKEFGRAITCEIPPNKSKGYLITVDDLLMAMRKLKNEKAEIKDE*
Ga0120090_100071	Ga0120090_10007146	F003539	MNYIEEYNDLVQTLAAEYSRKYSMIERDDIGQELWVWFAGHPRKYKEWSALEQKDRDKLIAKSLRNAALKFCEREKAKKVGYDMSELYYYDVSVVEAFLPTIIAESYEMPSKIKDLGNSVKSSELSDGMNWLVLRSDIATAYYKLSEAKQNILRLRFSMEQPDWATLAKEMDSTPDGARMKVQRALNSLVKHLGGWRPYNDEDTKEETTEHAEENAINAQAE*
Ga0120090_100071	Ga0120090_10007148	F003658	MNDLRGEPTFACICGCLMFEITVQWDQETREVGWYDLAQKCKDCGTITTAPTPIDWMDCN
Ga0120090_100071	Ga0120090_10007155	F001937	MTPDTATIVYSYFFVIAAVGAGIAMVAKHAIQKHTEELKDQLNKITYALYNDGKTGLINKVDQLIENQQCIRIDVEVLKSKAEQ*
Ga0120090_100074	Ga0120090_10007433	F031035	MKETINLRIQDLMVKGRELEQQLQQINGALQQCQWTLAELEKEEAPAKQEE*
Ga0120090_100421	Ga0120090_10042111	F076022	MNIAWSRLILLVLGAFVASAGPEFDSAWKSMHVPDNASFGTVTRSLLLCSIEGVRAGIPAMTTALIAFFMRQDRNLPVFSVKLPEVKRVSQATRDIDG*
Ga0120090_100421	Ga0120090_1004217	F006623	MNLQNYRLEPNPLTPGDWIVFGDITDDAGNILGTFGENGTSVFGWWVTQDAQFQQVYSNQFALVMAQEIIAGTAE*
Ga0120090_100793	Ga0120090_1007935	F003784	LATDDTDFAYYGLSHLADQRRRGDAPNMSNSNPLVDHAAVTGYRADGVSTEDLTSFIESFASLRASRVRGVGADQYSLAKGQKFESFSFSDTIRELVEELADASNYIDFLAIKLLNLQHIIDSELPNCD*
Ga0120090_100793	Ga0120090_1007938	F048001	MANTEIQYLKNEIKQLKADMANLIMALIELKVFKIKVDENGNAVYDTGKKEEA*
Ga0120090_100939	Ga0120090_1009393	F074405	MKKYLTSVIAIHNVEGKLGKWPGPIIEAESFEAAQDWCLKNTQYLFVEQEIMEARKADNTDFQLY*
Ga0120090_101062	Ga0120090_10106211	F014503	VRVSIQHWRFEDGSTVPNPGSRWETEPPPRGWYCWVYPIDDHEFEIWMARHCPTADYTHRFNSGNPMWTVYIKDDAEATLFTLKWL*
Ga0120090_101062	Ga0120090_1010622	F066485	MKIGFSLGRCVRDIVRGEVTTDDVAFLITATSINTTEQLFQVIQMYTYEDGYLLGLDEDHCQRVALELWNTNRLLQPRKQGLHRHKQPEDSVWVDIFPTKLSDNEVVKSAWDNYRLMLHMVENLENQATEIFKV*
Ga0120090_101205	Ga0120090_1012053	F039012	MHVESEKDFINLRIQFNHWRNRFPMFTHDVNQIERIIEQHIKNHSLALIQHRQTHNKIHLEHAQQELNEINRVISTVEKLELMALLSQ*
Ga0120090_102212	Ga0120090_1022125	F035651	MSYYDADPWANHSFNFIECAECESEFDQQDQEGGNICPTCIDKEEGESK*
Ga0120090_102416	Ga0120090_1024163	F035740	MKRALLALSLLISTLVITPEAVAAKRPCSALKTDIQQMLDAKYSGSEADAPQEYARRVVKAYQMGFVNKNCLTSKEYNGLLTGVTQLRDDCSKARLDKATWADVVKRCNIYKGLYKYVKVAP*
Ga0120090_103097	Ga0120090_1030972	F041075	VFLMAFTPPRSVRIPDVLWRKAKAKAKAQHTTVTAVIVRALYEWVNEK*
Ga0120090_103825	Ga0120090_1038253	F035651	MGYYDADPWANHAFNFIDCAECESEFDQQDQEGGNICPTCIDKEEGESK*
Ga0120090_104334	Ga0120090_1043344	F004865	VTYVKKPNGKYDELTEFKKNYKIKHVQTAKVILDLADKKIIKNGLNPEAGYEDMLEFYKRMLGDRLTPYLPKD*
Ga0120090_104383	Ga0120090_1043833	F101168	MNNFDDIIWQEMIQETVTRFINKGVYQTKIISTESPSVVIWSKTRKCLVGGKYQPDPLEIVDNGNGGKKATYDNNIFISLQNRSELTEFDVKEINESEGIVVTNATYGKPYFRFGFIPN*
Ga0120090_105155	Ga0120090_1051555	F048001	MANTEIAYLKNEIKQLKADMANLIMALIELKVFKIKIDENGNAVYDTGKDVKSEVQ*
Ga0120090_105174	Ga0120090_1051745	F038999	MTTETTHKETKLRFDCTCNGCRNYPTRPAEIWHESQIASKAQGYYFTKDTMRFFNSRIADFKPVGISPTGIFSLMVIVSNKRDNDPRYYEIVTLCPYGELGREWVSVGGSPIASYATLKEARKSARWNCSIAPQICDCHGCQLDKAGR*
Ga0120090_105202	Ga0120090_1052021	F025485	VLIMENVRKFLPLIIGGIVAIAFFFISRKVRQGSGNSQERSEILEKAREAKLAKSILKKSENEESTSNIES*
Ga0120090_105909	Ga0120090_1059092	F086659	MPTVFKHSLVTQIGTNPTDVVEIGSGVRATVIGCNLANVTEYDTVVADIQIVGADTTVSYYVKGLAIPPNTSVKVVTQGEKLILPSNTGLRIVTNTTDSIDATVSYVEIS*
Ga0120090_105909	Ga0120090_1059093	F066525	MAGNSSNYYLGTTPTESLGDSPRYWYALRRNEDGELFLVRSDQISDLDAYELNIPGPPEEDFDNFVPGVDYLEGIDTEHELVKENMFYPQYKWDNRSLFYYVDSEGMFTVRINRGYSYPTGISS*
Ga0120090_107553	Ga0120090_1075532	F025439	MNHEAIYKLNPSVVTIRGDVAYDADGNEVAYDKAAVQAYVDAHAYIAKRASEYPPITD*
Ga0120090_107946	Ga0120090_1079462	F031456	MAFIGNFPASGSAVFNLDFLPEYVLVDSANQSTQSLSNFSVVTSGVQLMSITNVNRLTALAKFDSGAILDDFVGTELSRTSSYIKLATGRINKTTTITGTNGVALARAFYAASTNISNVARRAVEQSINPSANATFDNFEALFFDETNILRAQITFANGFTDEFTTVELRALYSTYHVSDESSLLSGLVCIDADSGAGLISQVVLFNGAGGSTVVLKSDYVQL*
Ga0120090_108135	Ga0120090_1081351	F013252	MADNNLKGFRQTYQETGNISSGGGPGDKKLDKGASGSKRASNAVKGKPARSSKVGPDKNL
Ga0120090_109694	Ga0120090_1096942	F003268	MSRNNLPTNLPSVEKLIQRVAAAERSQQKDIRISIQEARELTAELAILTARLGKTVQEIHQMLAEIRESTTNIDVKFDGGSF*
Ga0120090_110240	Ga0120090_1102401	F085169	MNNIIDQYGSVSQQIQALEEIKSKLKAELIARGVGSYQGEQFFAEVQEYDRENISAPLVRKLSNEEFVKSVTTIQHIKAVVVKPLEAL*
Ga0120090_110240	Ga0120090_1102402	F018653	MSQYKYILIDEFGGACRKFVSKLEATPYLTDGMSLKALPKEPKANPYAMATLLLQEAPF*
Ga0120090_111322	Ga0120090_1113221	F020885	VVKSRGQHCGDLELAAYLANEAGPVPLVLDLRIAHDRIGSSANPALNGTLTHPNNIDESLNKAAKDKIRKYRADYNNNPPNAVAFMPAIAGTTGRLHSEFIRLLFLQAHRETDRFFAASGVQSAQSNLGASYFHFRRAAFSSLLKSRVGNIIAKASALRVNLNLDGAPIASSSHTHPSHSQTSRLFTSSLSLGVPVPRPTQCMGGA*
Ga0120090_112110	Ga0120090_1121101	F053252	MFDDMGELSVVGPAERDEIFARVYVEQRALKKGNAAEIACVRAGITSPELNMSIVASRQLARPEVQRLIMVAEASGVEVERREYTRDLFLDELQAVVQAAMDKGAYPSAISAVKTQAQLLGMLDQTVNVNHSVSAKDLDLATLRAMVADRARPVNVIDAVVVRGIGDGDE*
Ga0120090_112491	Ga0120090_1124911	F063624	MAQSAVSAIRAGCQMLSEGKAEIGKFKKQVEGGVADAKAIYAEVTGLWGWVKGLFGAPKKPVERAVVQPTKPDVALTSEGNTTKSSKKTPEPELSYEEFQARAVHDICENLKVYFEAVRQLKIHCRELEEEALTTDKVADSAIDRIEIQWQMQQLSAQLRQSMIYGTPQDLGLGAMYQEFLAKQEEIVEEQEVARELKLKKERDTAWQHEHREKILVAKLMYAVVVAIVMLELIGLYFVL
Ga0120090_112763	Ga0120090_1127631	F039134	MFDHLIHIHQQFKQRTIGIELQRFKNVVTKPGILRYEIEAYNEYLLLTNSFSLPIGTRIISDTNSLEVLTSQNGLEGLEEFSGLVAIELPANTKEHPNIEFIQIVKE*
Ga0120090_113191	Ga0120090_1131911	F002986	MAEIDQTEARLNTHEEVCAIRYEGICARLKRLENIGIGAAATIIMLLLTIVLKIS*
Ga0120090_113391	Ga0120090_1133911	F051077	MKLEHIIQEANVAAKIKDPKTMKMLGIAMRHDGTLPKTKVAALGPKPTDEDILKLWSDVLDASLRSTDYGDISADGKFDEWLTRMYMNGIVDFEDINGEGGDALGAWKALSVRG
Ga0120090_113775	Ga0120090_1137752	F010602	MIALHCNNKYKIYIIITMGIYDNGSIFGIRIYNFNDDDFANILFEKTYNEIMSDEEKKETYLFYTELNNKNEIRFQYYTECTSTYGEGTYFNWYPLSLNLFLEKFGI*
Ga0120090_115169	Ga0120090_1151693	F095454	MDYNKIANILSQINRDALQLEAVEYLPSDFWVELEDGLFLADLVSADWAEPTEMGKSQLEFAWRTLCGMRDLDPEVMYDSVEEFFESQANPE*
Ga0120090_115554	Ga0120090_1155542	F019134	KNFTATTFDDDSAIILAPEAFTVYRSAQNFMSVNVVSNLQVQVAIYGYMATIAKMPNGILKYKKT*
Ga0120090_116113	Ga0120090_1161131	F001787	MAAYTEHKIKAALGNEDSKLYVTAADDSFSTNPAFNPTQYLSEFVTNTRFGTPAIDACSQGTLPTSGMSISVPSLVTSVGGGSGVAPEVTXXXXVTVEAEAGAVQNTGMETQYLTGTVSKYAGMNTLSVELLERSDPNFYAELTKQLEYAYLKRLDQTVLAALIQASANGTNTTADLDGI
Ga0120090_117087	Ga0120090_1170871	F069784	PMESLMSKTANRQPLTVRLDPESKKLFAEEAEKCGLEAGVAARQILELYVQRLRESGDYIQTLSDFSQALKTRTA*
Ga0120090_117629	Ga0120090_1176291	F035630	DCKEVCVSSQSQVNVGADAGPSSQSQVNIGAGPRPSSQDGVSQLKEPVPLAIPQLNRLVEASFVRDESSASNADVPVIPSQLKVTHQILRHWEPFRDLKLRFAGSRRAEQLSLRLQQRIVATVEDSVLRTEMAGLESQEEDASQRVLFYKPMAWLGQIRPHRRDESWSAGLWQTFFSTSMGAQIPVIAEKPLATCGCKKFQLDPLGDHLSTC
Ga0120090_118140	Ga0120090_1181401	F011143	MHKIEITKKDGKKVTYELTPSVKVGFEAEFKTGWRKRLSELQLESDLWWFAHALEKAQGKTDKEFGDDYINQYVDVDLLYEPKNG*
Ga0120090_118956	Ga0120090_1189562	F023061	MDASDVLVQTLDKETTAKRDWIASGQAKDYSEYQRVCGEIKGLLFARQEILDLKQKMENSDE*
Ga0120090_120539	Ga0120090_1205391	F072327	MSIETIVLLSNARDDSQPSVWQYSDKNKAAGYHKINNGVHTVVFELNNFKGSIKIQATLELYPAESDWVDVVYDNSDVSLTAIDSTPITNNAVCTFTGKFVYIRAAYQLEQGTITEIRYNY*
Ga0120090_120630	Ga0120090_1206301	F071961	RAKIRHYRQLYLNRPDPIAFMPVAVDTSGRVYDDFSRLLFLHAHREASALVNEIPEESEQFRFLRAACYANIKGSVGLILAKASAMRISIPLDLSSRPFIPLPRFMRSRRAATLLAPSLVFTPRRFA*
Ga0120090_121563	Ga0120090_1215632	F096715	MIKKYKLEDLLIQSDASALRPAEDTEWLSHSNQGRELLAQIDQTMMRVKSGKEKVYSSAAIRKKLGLDDQNDAAGFGGLIPP
Ga0120090_122018	Ga0120090_1220181	F009137	VDDNKLKNFCENYEVRVLDNQKRRARYHPPRFFTDPERADIIRKDIVEYEHERVYTVEIPEGRLQALVELERRFWRWQEHSRGEVDMFQTLMDKEREEAYYRNSNEAVRKAYEQYSIMLNLAGYQRKF*
Ga0120090_122258	Ga0120090_1222582	F002597	KRELRRPMDIRGPALVYDPRFHTFDSWASLMCELYAPQQLEIPSAQTDWKVWGNGIKAIDVFTNEAIPSTDNYEDWQVWAEALVNAVNPAT*
Ga0120090_123648	Ga0120090_1236481	F002995	TEPGARKLYAMMDRVQKARRKTVGKDKVANNPRADKYLPA*
Ga0120090_123648	Ga0120090_1236482	F000843	MPLYHITPNQLPQVWPTAAPLLQKAIDLDPSAITIEQVEYAVRTGKTFLLVWEEPDVGITGAVTLEFVDYPRERVAHVNLMGGKSIVRTHVFAEAMDWMRAYGATKAQCWARGTLVQMYEKMGMENT
Ga0120090_124080	Ga0120090_1240801	F052871	AMIKNRHMGICFALLVQSIRAVPKNIRLNCSVFQLATFKNKRMILEDIYEEISNVIGIEDFEELYDYATAKPYGSLIIDTTNGKRFLSNLDSELSLSAK*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300011918: Mine pit pond microbial communities from Vermont, USA - 2S

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences