Sample 3300010060

3300010060: Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_0_1 metaT (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300010060 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0110119 \| Gp0146832 \| Ga0127425
Sample Name	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_0_1 metaT (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	16930772
Sequencing Scaffolds	83
Novel Protein Genes	88
Associated Families	70

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Thermoguttaceae → Thermogutta → Thermogutta terrifontis	1
Not Available	55
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4
All Organisms → cellular organisms → Bacteria → Acidobacteria	3
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Ascaridomorpha → Ascaridoidea → Toxocaridae → Toxocara → Toxocara canis	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group	1
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fagales → Fagaceae → Castanea → Castanea mollissima	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4
All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	1
All Organisms → cellular organisms → Archaea	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Dictyobacteraceae → Dictyobacter → Dictyobacter formicarum	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	2
All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Vulcanisaeta → Vulcanisaeta distributa	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Grasslands Soil Microbial Communities From The Angelo Coastal Reserve, California, Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil → Grasslands Soil Microbial Communities From The Angelo Coastal Reserve, California, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	grassland biome → biosphere reserve → grassland soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	USA: Angelo Coastal Reserve, California
Coordinates	Lat. (^o)	39.7181	Long. (^o)	-123.6527	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000203	Metagenome / Metatranscriptome	1619	Y
F000329	Metagenome / Metatranscriptome	1287	Y
F000611	Metagenome / Metatranscriptome	987	Y
F000817	Metagenome / Metatranscriptome	879	Y
F001093	Metagenome / Metatranscriptome	780	Y
F001233	Metagenome / Metatranscriptome	741	Y
F002020	Metagenome / Metatranscriptome	603	Y
F002654	Metagenome / Metatranscriptome	539	Y
F003269	Metagenome / Metatranscriptome	496	Y
F003391	Metagenome / Metatranscriptome	489	N
F003402	Metagenome / Metatranscriptome	489	Y
F003427	Metagenome / Metatranscriptome	487	Y
F003497	Metagenome / Metatranscriptome	483	Y
F003911	Metagenome / Metatranscriptome	462	Y
F004353	Metagenome / Metatranscriptome	442	Y
F004925	Metagenome / Metatranscriptome	418	Y
F006508	Metagenome / Metatranscriptome	371	Y
F009335	Metagenome / Metatranscriptome	319	Y
F010686	Metagenome / Metatranscriptome	300	Y
F012104	Metagenome / Metatranscriptome	283	Y
F012439	Metagenome / Metatranscriptome	280	Y
F013305	Metagenome / Metatranscriptome	272	Y
F013993	Metagenome / Metatranscriptome	266	Y
F014312	Metagenome / Metatranscriptome	264	Y
F014482	Metagenome / Metatranscriptome	262	Y
F015442	Metagenome / Metatranscriptome	254	Y
F016001	Metagenome / Metatranscriptome	250	Y
F016975	Metagenome / Metatranscriptome	243	Y
F017280	Metagenome / Metatranscriptome	241	N
F019606	Metagenome / Metatranscriptome	228	Y
F023352	Metagenome / Metatranscriptome	210	Y
F024104	Metagenome / Metatranscriptome	207	Y
F026580	Metagenome / Metatranscriptome	197	Y
F029699	Metagenome / Metatranscriptome	187	Y
F032115	Metagenome / Metatranscriptome	180	N
F032218	Metagenome / Metatranscriptome	180	N
F032479	Metagenome / Metatranscriptome	180	Y
F032829	Metagenome / Metatranscriptome	179	Y
F033276	Metatranscriptome	177	N
F033328	Metagenome / Metatranscriptome	177	Y
F035259	Metagenome / Metatranscriptome	172	Y
F036030	Metagenome / Metatranscriptome	171	N
F036176	Metagenome / Metatranscriptome	170	Y
F037587	Metagenome / Metatranscriptome	167	Y
F037756	Metagenome / Metatranscriptome	167	Y
F038031	Metagenome / Metatranscriptome	166	Y
F039900	Metagenome / Metatranscriptome	162	Y
F040607	Metagenome / Metatranscriptome	161	Y
F044917	Metagenome / Metatranscriptome	153	Y
F045561	Metagenome / Metatranscriptome	152	Y
F046349	Metagenome / Metatranscriptome	151	Y
F049431	Metagenome / Metatranscriptome	146	N
F054015	Metagenome / Metatranscriptome	140	Y
F056193	Metagenome / Metatranscriptome	138	N
F060086	Metagenome / Metatranscriptome	133	Y
F060937	Metagenome / Metatranscriptome	132	Y
F066797	Metagenome / Metatranscriptome	126	Y
F067356	Metagenome / Metatranscriptome	125	Y
F068019	Metagenome / Metatranscriptome	125	N
F068669	Metagenome / Metatranscriptome	124	N
F068679	Metagenome / Metatranscriptome	124	N
F075940	Metagenome / Metatranscriptome	118	Y
F076940	Metagenome / Metatranscriptome	117	Y
F079648	Metagenome / Metatranscriptome	115	N
F079669	Metagenome / Metatranscriptome	115	Y
F080014	Metagenome / Metatranscriptome	115	Y
F081897	Metagenome / Metatranscriptome	114	Y
F082021	Metagenome / Metatranscriptome	113	Y
F085271	Metagenome / Metatranscriptome	111	Y
F104573	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0127425_100676	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Thermoguttaceae → Thermogutta → Thermogutta terrifontis	951	Open in IMG/M
Ga0127425_101365	Not Available	575	Open in IMG/M
Ga0127425_101714	Not Available	952	Open in IMG/M
Ga0127425_101877	Not Available	560	Open in IMG/M
Ga0127425_101991	Not Available	729	Open in IMG/M
Ga0127425_102019	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	786	Open in IMG/M
Ga0127425_103059	Not Available	831	Open in IMG/M
Ga0127425_103157	Not Available	778	Open in IMG/M
Ga0127425_103463	Not Available	696	Open in IMG/M
Ga0127425_103626	Not Available	662	Open in IMG/M
Ga0127425_103763	Not Available	913	Open in IMG/M
Ga0127425_104365	Not Available	549	Open in IMG/M
Ga0127425_104414	Not Available	771	Open in IMG/M
Ga0127425_104581	Not Available	567	Open in IMG/M
Ga0127425_105442	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
Ga0127425_106043	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
Ga0127425_106299	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Spirurina → Ascaridomorpha → Ascaridoidea → Toxocaridae → Toxocara → Toxocara canis	649	Open in IMG/M
Ga0127425_106460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
Ga0127425_106857	Not Available	736	Open in IMG/M
Ga0127425_107054	Not Available	508	Open in IMG/M
Ga0127425_108068	Not Available	1127	Open in IMG/M
Ga0127425_108471	Not Available	660	Open in IMG/M
Ga0127425_108542	Not Available	668	Open in IMG/M
Ga0127425_108641	Not Available	519	Open in IMG/M
Ga0127425_108881	Not Available	568	Open in IMG/M
Ga0127425_109353	Not Available	501	Open in IMG/M
Ga0127425_109517	Not Available	657	Open in IMG/M
Ga0127425_113341	Not Available	507	Open in IMG/M
Ga0127425_113833	Not Available	608	Open in IMG/M
Ga0127425_115803	Not Available	612	Open in IMG/M
Ga0127425_116062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
Ga0127425_116288	Not Available	752	Open in IMG/M
Ga0127425_116939	Not Available	918	Open in IMG/M
Ga0127425_117454	Not Available	889	Open in IMG/M
Ga0127425_117609	Not Available	572	Open in IMG/M
Ga0127425_117880	Not Available	580	Open in IMG/M
Ga0127425_118333	Not Available	514	Open in IMG/M
Ga0127425_118705	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1237	Open in IMG/M
Ga0127425_119048	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fagales → Fagaceae → Castanea → Castanea mollissima	671	Open in IMG/M
Ga0127425_119514	Not Available	613	Open in IMG/M
Ga0127425_119766	Not Available	764	Open in IMG/M
Ga0127425_119877	Not Available	917	Open in IMG/M
Ga0127425_120362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	588	Open in IMG/M
Ga0127425_120713	Not Available	537	Open in IMG/M
Ga0127425_121034	All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Miaviricetes → Ourlivirales → Botourmiaviridae	677	Open in IMG/M
Ga0127425_121344	Not Available	782	Open in IMG/M
Ga0127425_122323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	623	Open in IMG/M
Ga0127425_122423	All Organisms → cellular organisms → Archaea	542	Open in IMG/M
Ga0127425_122588	Not Available	832	Open in IMG/M
Ga0127425_122995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
Ga0127425_124031	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
Ga0127425_124152	Not Available	541	Open in IMG/M
Ga0127425_124934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	517	Open in IMG/M
Ga0127425_124974	Not Available	755	Open in IMG/M
Ga0127425_126435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
Ga0127425_126528	Not Available	567	Open in IMG/M
Ga0127425_126547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Dictyobacteraceae → Dictyobacter → Dictyobacter formicarum	1029	Open in IMG/M
Ga0127425_127246	Not Available	552	Open in IMG/M
Ga0127425_128047	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	567	Open in IMG/M
Ga0127425_128701	Not Available	785	Open in IMG/M
Ga0127425_130737	Not Available	753	Open in IMG/M
Ga0127425_131358	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
Ga0127425_132242	Not Available	537	Open in IMG/M
Ga0127425_132423	Not Available	881	Open in IMG/M
Ga0127425_133330	Not Available	569	Open in IMG/M
Ga0127425_134002	Not Available	710	Open in IMG/M
Ga0127425_134429	Not Available	643	Open in IMG/M
Ga0127425_135142	Not Available	617	Open in IMG/M
Ga0127425_136540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	596	Open in IMG/M
Ga0127425_137327	Not Available	930	Open in IMG/M
Ga0127425_137594	Not Available	744	Open in IMG/M
Ga0127425_137599	Not Available	616	Open in IMG/M
Ga0127425_137819	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	577	Open in IMG/M
Ga0127425_138104	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	913	Open in IMG/M
Ga0127425_138333	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei → Thermoproteales → Thermoproteaceae → Vulcanisaeta → Vulcanisaeta distributa	644	Open in IMG/M
Ga0127425_138351	All Organisms → cellular organisms → Archaea	556	Open in IMG/M
Ga0127425_138386	Not Available	563	Open in IMG/M
Ga0127425_138561	All Organisms → cellular organisms → Archaea	555	Open in IMG/M
Ga0127425_139120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	679	Open in IMG/M
Ga0127425_139195	Not Available	594	Open in IMG/M
Ga0127425_140556	Not Available	593	Open in IMG/M
Ga0127425_140759	Not Available	745	Open in IMG/M
Ga0127425_140901	All Organisms → cellular organisms → Eukaryota → Opisthokonta	1248	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0127425_100676	Ga0127425_1006762	F010686	VPFETKGAWGMSWRQETLKGVEDCEKLGEAVKQALIPRYPNWYPLNS*
Ga0127425_101365	Ga0127425_1013651	F003497	DPLNSPLPDRHARPKHGSQRSGDGTLLLPVTAFIRLRISAPEPIRLFYLLEAFVSEQSFARPQRLFSFENHRGEVKAPDLSLRRNSELFFQPVRPCAPTLGVVHHASGGVHRTKPVAVSRAQNSQTSIQPSLPFRTFVPPDRSAQSAACSEKPTLVPGPFSLRSPKASITF*
Ga0127425_101714	Ga0127425_1017142	F032479	MTYQWYDDTKVYSDRTAFVWVVGKLQLMPLRMVDALASERVPDLILSYVFTHKMRRTIPPRSTHSTSHRAPVLL*
Ga0127425_101877	Ga0127425_1018771	F046349	FTASLSAGMHGTEHCRQVYGTDPRSLPATAVQRQRIDARKSASAYNQSGAGLSQRSFTRSQRLFARRTTIPRSVFPACCFETLLNRLQAR*
Ga0127425_101991	Ga0127425_1019911	F001233	LNVSRIIPGDWGKVESGWLAQPLQKRVVRFDGGGRIHQFLWRRSRVVSKREKGTER*
Ga0127425_102019	Ga0127425_1020191	F001233	LKPNVSRIIPGDWAKVESGWVAEPLLSRIARSGSGGRIHQFLWRRSRVVSKREKGTVR*
Ga0127425_103059	Ga0127425_1030591	F056193	LRFRSPSEVHRSTPAPSRGPEGPHVGRCFLSWALVPYDTSGTTDPRFTGLPTPLRATSGVWVPPSRLPPSSLPTPFGAGASLGFILQGVLLATIGTPSEAPCPLGVSRVDSPHPHGERADAAAFRALIPSRARSAIPDPEGSGAPMPSWVSTLQSVPSPRPSPPLRIAGDPLARVGRFDVPARLRLRVFRLGEIGCPLSGMPALLGFFTFRPSRHRGDRGGGRAHDFTSRLARVASGANRSEPPRITDPAVAFAAARRRRPSVNGC
Ga0127425_103157	Ga0127425_1031571	F081897	MLSFPCRHLAPYLGMAAGFPTLFSTASGVFGLVAGPSSTLRLLNFE*
Ga0127425_103463	Ga0127425_1034631	F023352	MRPKHPHAAESGVGKHKARESEAPNNVPSGKSAWRTP
Ga0127425_103626	Ga0127425_1036261	F003427	LVKTRSRNHKRVFTWFASWRLQTSAEASLEASLEILSPQGEGRPCYEAESIPLAVENSVGKLAANVR
Ga0127425_103763	Ga0127425_1037631	F045561	PDFRKEDGGSGQKARAGRQPESRQAHPGNGETPGTNREGFFAVKAEGGGDVKAFPRCTGRAPGGAEAHEGSGSVEA*
Ga0127425_104365	Ga0127425_1043651	F015442	VSGQSLRASERSLRETGSGQVVRAGGLGSVNPQSSKDGSGESTRIRPGILFAMLSAECAGGGQGCES
Ga0127425_104414	Ga0127425_1044141	F000817	VSRIIPGDWGKVESGWLAQLLLSRIARFGSGGRIHQFL*
Ga0127425_104581	Ga0127425_1045811	F040607	SDLISSLALRGHAPHRASQSIVPCAPPVNSPTDVFTTRRINAFRHAACCYRSGPVARNGLSLACNSCSFSEPPFQGQRSWPATSRPTAWSHCPFGFRLRHRFRFAPDNGSIFASIPSQRFHTIRATASAVSTPLRDCYVPPDQSVQPYRLPLDPPSGSARFPLAPRSLFYS*
Ga0127425_105389	Ga0127425_1053892	F016975	LQAGGATTSPSELKSLTQKFCDRKAQNGPATRPKTPLAVENSVGKLAASARLMPARERERGA
Ga0127425_105442	Ga0127425_1054421	F004353	GRVFLTTVAGLTLVVAVWAFSPPSTQEAALLNLSSTSNVPQEQSVSGKIASVEKTSFTLTVGQSQTQNLQQDPATAKTMTFLIDKNTTIDGSLKVGANADVTYRQEKGSNVAISVRVTP*
Ga0127425_106043	Ga0127425_1060431	F032829	LVRILVAAALLIVAVPVIASAQIYSRDDRYDRYDRSNRFDVRDAIARLDNASARLQSDLYAGNERRVLGGLLSFRTVDNDAIAEARDFRRAVRNLRAAARGGFDLDGSVDEARVVLDRGVQLDRYLRLRTGRTSVDADLAEIRSDLHVIANAYGLSMPY*
Ga0127425_106299	Ga0127425_1062991	F080014	GFDVVGSPAELRAEVAGWPRKSTGTKASANKNELALAA*
Ga0127425_106460	Ga0127425_1064601	F029699	MVTTLLILAIPIVGSAQFYNRDRYDRSYRSDVHDAIVRLDNSSARLESDLSYTRGRRVLGIFWVSNSDPNAVAQVRDFRRAVRQLRIASAGGRDLNNSYDEARIVFDQGVQLDRYLRLRTGQTGVDADLSEIRSSLNVIANAYDFSYDLRTRY*
Ga0127425_106857	Ga0127425_1068572	F079648	MRRSAGAPLTRFSATLRISVPVGRQDQQTIKASWSFVAFLPFHTASRLSSPPGPVAIKARARYVVFPTRLERRTGIRAGYPVYSPLMPLAEARLQGVPPPVKRRSRRNACLPGRSLPRGFPSPASCSGFPEDPLTALGRRQNTVRPGPQGLAPLTSWLPPLAG*
Ga0127425_107054	Ga0127425_1070541	F076940	GTLRLSTPQRAFSPPAGSMPQGTPPAALDRGRSLVTAFRSPVTAASSRSVHPGVKAPGLLLRFLPLVHAARSDFSLHHRYRFAPASGDFVASIPLQRLRAVRTTAPAISTPLQDSCILPDQSVQSPRLPLGPPSESARLPLPPRGRSIARYGAGSSFMARYVSGGLLFL
Ga0127425_108068	Ga0127425_1080681	F066797	LILYEIISSADLGGSSNYSKGKTFFYFSLKTEVAKGFMTTVIDHELVDPKMKDYEK*
Ga0127425_108182	Ga0127425_1081821	F000203	MGVRQSLFPMLTFGAPFSGAVSFPTPFSTASGVSGLVAGPSSALRRLDFE*
Ga0127425_108471	Ga0127425_1084711	F006508	VALANASSKAMADQCQVVKTRSQSYRRVLTWFASRWRNHQPKRAEKP
Ga0127425_108542	Ga0127425_1085421	F104573	MQPELGNRFYLKLNIVWKPIVKKYSNGKVKRTLKKGSKVLEMVKREGNKIIYNR*
Ga0127425_108641	Ga0127425_1086411	F026580	RKGTARGGTIRNRSESSRVVQESFEPERIAVTQRVNGCYCVSARANGSGGFRKEVSQRKDAERRDKVSVRTGEDTGSRQDP*
Ga0127425_108881	Ga0127425_1088811	F015442	VSGQSFRASERPLRETGSGQEVRAGGLASVNPLPLKGGSGEQTRIRSGNLSAMLGAVHAGGGRGCESGHL
Ga0127425_109353	Ga0127425_1093531	F085271	MESGLGERREIGRLAEVSFWKAKPAEHCDPEGHKNPQWGVEAGGAFRSIGLERIR*
Ga0127425_109517	Ga0127425_1095171	F000329	MVAAQEARAWSGESWPVGEPVTLVIEDERFFGWVASGSPAHSLACVAIEFKRGSHRVQERIPVENIQRLRDYLHAHPELRTAKEQGAPLRNG*
Ga0127425_113341	Ga0127425_1133411	F044917	ETASLVGRSEPGTLIRGRRHLKMESGHGERREIGRSAQVGFQKAELVEHYDPEGHKNPQRGVEAREAFWDIGLERIR*
Ga0127425_113833	Ga0127425_1138331	F017280	FCKGGNGKVRRSILARLIFTAALLILALPLVSSAQIYNRYDYDRYNSDRTDRRDVHEAIRQLDISSARLESDLNYGRTRRVFGGIFQFRTVDTGAIDQVRDFRRAVRDLRTSSRGGFALDASVDEARMVLDRGVQLDRELRLRTGNGSVDAELAAIRSSLHIIADAYDLSMPY*
Ga0127425_115803	Ga0127425_1158031	F056193	PLRATSGVWVPPSRLPPSSLPTPFGAGASLGFTLQGLLLATIGTPFGAPCPRGVSRVDSPHPHGERADAAAFRASIPSSSSFCHSRSRRTRRADAFLGFTLQSTLSPRPSPPLRFAGDPLARVGRFDVPARLRHRVFRLEEIGCPLSGVPALMGFLTLRPSRHRGGRGGGRAHGFTSRLARVAGGANRSEPPRITNPATTFVA
Ga0127425_116062	Ga0127425_1160621	F014312	VTGPDLRPAKGSANGVVRLWERVKAERFAFAMTPLVEAERLARKTERFSGRPDKNG*
Ga0127425_116288	Ga0127425_1162882	F009335	MVETRRRNHKRGSTWFVSRRPQTPAEASLEASLKIQRPQGAGRPCYEAEDSACRGEWRREAGS
Ga0127425_116939	Ga0127425_1169391	F039900	MNHSLADQDRETWNYVLSDYRTESERDSEADIPVPDRLLPRRRSLELVRMLKLGQMVGILLWLNRENLITLGGRERLLYLQSKASFEALEAGLRFARRLSQEEKLRSDFRHQMRELNRRPQSKHFRQSEARRIGVGYRDKGMLPEASSGARTAAQKDSFIPSHLIPSILLGSIRTVIPSCLTADEEWVDLSMVAGSFGTQADIGARPLLPPL*
Ga0127425_117454	Ga0127425_1174542	F012439	MRFHPPSSFPPPSEFYGLRAALRAWLNLATQPNSRRAPSLGFPSLIATSAAGVYHSAGIPDPAVTFRPRRFSRPRRFPPPTAFAGLFHPAATSRVCPSGVCPSPRSRTGFTRPIHALLPLDAAACDQRPRPRLQGFAPRSECGVGLDGLGLDRSAPLLGLSSSGFSPRATWERLHVPSALDLHRDEPTAAGPRRFAVAQIGLPGFRLPTRSSFLA*
Ga0127425_117609	Ga0127425_1176092	F024104	VAAASLPVARCTSTTRFGLPRPASPLPSGTFASLGIKAFNAVCCRPVRLTNPPDFLSLPVARSNESEDNGSSFQVRYVSIGL
Ga0127425_117880	Ga0127425_1178801	F003497	DPSNSPLPDRHARSKHGSQRSGDAALLLPVTALSGYGSVRQSSSANFYLLEASVSERPFARPQRLFSFENHRSEVKAPDLFLRRNSELFFQPVRPCAPTLDDVYHASGDVRRSKPVAVSRAQNSQTSIQLSLPFRTSVPPDRSAQSAARSEKPTLVSGPFFLRSPKASITF*
Ga0127425_118333	Ga0127425_1183331	F013993	RKEKTMKRQKAFSLLQLLIEVVITLFIAGIVVPSLLRSDVAMKEALAVGSLHNIKIAGVVLSYTNQNVEFAILGALVGAMAAFAIHFAAITPKNTSFTRTTTLRAAPLQH*
Ga0127425_118705	Ga0127425_1187051	F068019	MKGSKIMAKYQDKVSEATQELSESIREATQAIADSAVSAQERNWKFAQSTFENEVELLKSHAESTRTMMEKLVGESQKGQPLFQSVADSVVDARERNLKFVQSFLDNGTEVLRSHTESTRTLMQTLSEQSQKQQEAFQVLARGTWDAYMGFLSSPFSYYEEAMETAESIARQGVDTVQKMTRQGMGTAEKATHYEKQKV
Ga0127425_119048	Ga0127425_1190481	F049431	RINQVTILSPSAEAPEQTPRRRPGCTGRKGRRRSEPQPQASEVCETPKPQATDSIAPTEFPKLRSATGGIRLLHRSLHRYIRPSGGEDSRQVNAQARVLDRAIPEDLVKRLAKPVIHRPQMLPANRETNRTSVPSTSTLQLPEGGQHRASRKESPSPK*
Ga0127425_119514	Ga0127425_1195141	F032115	SSLGLMVAPPACEPGQDTFVTLLPRLDQLAPGRPPRLAVRWPGATGLTSYLSGCLSLTSQRSVFDTSPTFWKFFGPGLDPHCFPVSEALFVRLSASLLRRVSRRNRQSTPLRAGAQ*
Ga0127425_119766	Ga0127425_1197661	F037756	LFPVPTLGAHLAVAAGFPTLFSTASGVFGLVAGPSNVSRR*
Ga0127425_119766	Ga0127425_1197662	F004925	LLNVSRIIPGDWGKAESGWLAWPLSTRTAGFGSGGRIHQFLWQRSRTVSNAKQEPGGKER
Ga0127425_119877	Ga0127425_1198771	F012439	KVCPEHLPPPEVPASPAAAQCESPRSALPLVDLVLPGVLYADESRGHWVPRSRHGLGFSPWPSRSLFVRRPLHLSMKFHPPASSPPPAESCGLHAALRAWSNLATRPNSRRAPPMGSSPSSRRQQAASTTPQGIPTQRSKFRPRRFSRPRRFPPPPAFAGLFHPAATSRVCPSGDCPSPRSRTGFPRPCHALLPLSAAACDQRPRPRLQGLAPRCECGVGRDGLGLDRSAPLMGFSSSGCSPRTTWECFHIPSTLGLHREEPLAVGPRRLTVARVGLPGIRLPTRSSFPA*
Ga0127425_120315	Ga0127425_1203151	F060086	GQEDPFELDSSLLLSSGRLGEDVRGSTSYDHETPLLVDLADLLYNGIA*
Ga0127425_120362	Ga0127425_1203621	F003911	MESEKRRMTELKQLERDTQNVNGLNEHSSYCECIWCLEGGRQVVEASELAKRELEQEMATMLRDLPLTVAITKQDDRSSDEYTWKCLGMTGKATSFVDATREALQSLIGDFIVTR
Ga0127425_120713	Ga0127425_1207131	F019606	VPRSGLLAEKQRVISRALIRVGQKPMRGAEEKVPRFSRMPCYGRACRLESELFKGSLG
Ga0127425_121034	Ga0127425_1210341	F033276	EIPLSLVAVCRKDKKIRAAITSLPVSVAPIKSGVISMDLRPENYNMSRDEEHNAMRKEIERVRERGIARGSERKTKHSTGVIPASRSFNAVRKQGRKISPEILPACYVRSFINKVKEENVLREVAPLEVSLPPGDGSQINRLIDNIRAFKLTQNSSANPGTIDTTVDFVSLCC*
Ga0127425_121344	Ga0127425_1213441	F032115	VRPLSSLGLMVAPPACEPGQDTFVTLLPRLDQLAPGRPLRLAVRWPGATGLTSYLSGCLSLTSQRCVLNTSPTFWKFFGPGLDPLSFPDPETLFVRLSASLVRRVSRGNRQSTPLRAGAQ
Ga0127425_122323	Ga0127425_1223231	F032218	MTDNRIQETSWDVVNSVRDANQVVANTAVTVLDRNMKFAQNTFLGGIEILERETDDMRNLTREWGQQVQKQQEAFQKLWFGSMETYMNFLNTWFSFYQQVWGANRAALDREFRFAQEAAHRGQENG*
Ga0127425_122423	Ga0127425_1224231	F001093	WTEENSPRTTIRESSPLKLSRVFRFVDPQTSASQISDFPDSNPSGDTPLEVRMKHFTEIENFTFLGYTLAHELGGTTPTPIRTVIDLQVPDEEFQNFINEAKSATLTDEELADTVLDVGINWEHFVASNDNLLIPEHPLKITDVLMQEKIDSLDIITEAFVREVNLRSIEKKTGTKGRQS
Ga0127425_122588	Ga0127425_1225881	F003427	MVKTRSKNHKRVFTRFACWRLQTSVEASLEASLKILPPQGAGRPCYEAESIPLAVENSVGKPAANARPMSARERERGELP
Ga0127425_122995	Ga0127425_1229951	F067356	ARSTGQNEGEIFTKKLHGEPGIVKKVLKEEKNEDGNDLRAETGTELAAFTCGPVAVKVTGGVVVAAKSEGKLKTNKMLNKILVEFLAEKPGKQIPEKWTPNGGGISNEKHEEITEHLFGDVGKGPEASGQSLKTVQKSGTIKVELRQCEKTITCSN*
Ga0127425_124031	Ga0127425_1240311	F012104	VSQTVPKTGQLNQCFGVYKSVCCGSEIVITKGAIFPFCPDHARSPTVWKLMPDEDMTQLTDKKKSDPKRAA*
Ga0127425_124152	Ga0127425_1241521	F017280	EKGGNEKVRKNILVRLIFTAALLILALPIVTSAQDYNRYDYDRYNSDRTDRRDVHEAIRQLDSSSARLENDLNYGRTRRVFGGIFQFRTVDTNAIYQARDFRRAVRDLRMASRGGFALGSSVDEARMVLDRGIQLDRDLRLRTGNGSVDAELAEIRSSLHVIADAYDLRIPY*
Ga0127425_124854	Ga0127425_1248541	F000203	GMGVRHALFPMPALGAVKAASFPTLFSEANGVIGLVAGPSSALPPLDC*
Ga0127425_124934	Ga0127425_1249341	F003911	MESENIRMTDLKHLERDIQNIHGLNEHGSYCECIWCVERNTQLVKSSDLAKQEIEQEMTAMLQDLPLSISITKQGDLDSDEYTWQCMGITGKADSVVDATREALQSLIKAY
Ga0127425_124974	Ga0127425_1249741	F032115	GWECATLSFPVPALGACWLPAPRRYSPRPAEFVRPRSRAVQRLALAEFRVRPLGSLGLVVAPPACKPGQDTFVISLPRLDHLAPGRPPLLTVRWPGATGLTSYLSGCLSLTSQRCVLKHRRRSGSSAGPAWPASFPESESLFVRLSAFLIRRVSDRQSAPLRAGAQ*
Ga0127425_126435	Ga0127425_1264352	F068679	HKAPTSYKTTPEPSTGHKTVAAVLQGYASRFDCDNLAGGGDKPPVPREANIVPFEMRKGMTRMLGEIIVLLAMKQRRAPLPVSPALLKSLWLRGFPENWGELESFARRFLFLGDERMLLAELRRRSAPITYRPANPQGPTGIAVGQRRETERGQKCQCLPTN*
Ga0127425_126528	Ga0127425_1265281	F082021	VNPASTLKLALSLQRGLANQPDLTFPQSPGIILEVSGFNMLTAVV
Ga0127425_126547	Ga0127425_1265471	F068669	WEVVVMLHEVMKIYEVEAETKEEAMSKVADMETMGKQWLLLRGVLVRVSSWPMVRDQDKPQEQEIFRR*
Ga0127425_127246	Ga0127425_1272461	F037587	FTTGMHGTEHCNPERRAHCPSASPVSDFAVTGSKLPDALQLSPGRGWMLVTAFRSSATAAAFTASIPESTLLAYYFASAPIDSAARSVFGSATGPRFAPPPAASTPQTRCSFLDQLDLPRPQPPLPVRTVTSLRIKAFCRTCRSSTRLPIPPDLRSLPAAGLYC*
Ga0127425_128047	Ga0127425_1280471	F002020	MHGIEHCRQEAPGDSPLRSPMAVLPTTRSMRRDSPLAAFCPEPVARNGFSLAHNGYRLSATSIPGSKLPACYFASFQVRFRARSTLRLHYRDHRIAPVAAASLPVARCTSTTRFSLPRPASPLPSGTFASLGIKAFNTVCCQPVRLTNPPDFPSLPAARSDQSWDNGSLFQVRYVSVGL
Ga0127425_128701	Ga0127425_1287011	F054015	VLVTLAVARKRDLPNERRPTAGQSEHTHREGHVIAAGSVKTFRHVGDVEMNTAGL*
Ga0127425_130737	Ga0127425_1307371	F033328	RKTNARMSPKALWIIPGDWAKVESGWLAQPLLKFDRKVETEEA*
Ga0127425_131358	Ga0127425_1313581	F003402	AFIPPSVGPLIHKFALCNPDDHKVCGPQPRPSPANAIIFSGVGKLTPASDNGVDASRAEWVVFRVYIEDRSEPGGFHPKGAVEPADIYCFQAWKTGIRTAKKPDFSTISAEFRTALGQANCDFLNSLESGALPIGSLPSPSVNGVTADIQDCGPLHDGNQQIHPSTGATCNQ*
Ga0127425_132242	Ga0127425_1322421	F000817	VSRIIPGDWGKAESGWLARLLLSRIARFGSGGRIHRFL*
Ga0127425_132423	Ga0127425_1324231	F038031	MFTDPLTVVYDGSSKSLPRISVEKDYTRYQTADGEFEVQISNNLRSARNGIAVASVKLARRIPDPTPGDVFNKDFREIRNVLGLSYTFDALTRAETSVDVPRLRTALLALVDSTFQGRVISGEK*
Ga0127425_133330	Ga0127425_1333301	F014482	MEYLQTKAPDDSPLSSPKSGFPGPRFNASWLAACSLLPGTGLLVTAFRSPATAASSRRPPFRGQCSQPATSHSPESFPCPVHPWLRYRASGLLRSRPLLRSGPVALPLPGSACRIAHPPLPSGIFTSLGIKAFSYACCLPGPPDESARFPFAPRCPFSKVWAADHRSRSATFPPAC
Ga0127425_134002	Ga0127425_1340021	F075940	MKNEMKNEILLNVEELEERIAPSATNASGTGKHHGSTPEVPSGAHPQPNPNPNSH*
Ga0127425_134429	Ga0127425_1344291	F079669	VASGERAAKSRGRPEANRSRRGDEVINVSLTWFVSRWRNHQPKRAEKPHSTIQCREVLDGPATRPETPLAVENSVGKLAA
Ga0127425_135142	Ga0127425_1351421	F035259	IHAIPIVLQKVGSPMIELPTKIALFVVVDVPLLRVFIRVEIEDQVFTWSSMFSCDTSPVDTTQVLIHIDQQLRLVLDVSSVYLCQFVANVAFRCCSIRDRTFLFEMQPHIEYGQTLRGSAGPHLRALFINLKDHSKQANEVLH*
Ga0127425_136540	Ga0127425_1365401	F003911	MESEKRRMTELKQLERDTQNVNGLNEHSSYCECIWCLEGDTQVVEAPDLAKRELEQEMATMLKDLPLTVAITKQDDLSSDEYTWKCLRFTGKASSFVDATREALQSLIGDFIVTRYN*
Ga0127425_137327	Ga0127425_1373271	F016001	VWESAIETTVFSRRLDPIPSWASLLQVFALDAVEAPSRPLPLMALSATLSSHCHRRPSAFRHRAWLASLEAAYLLEVWDLPPIPSCPGICGEVRRSASTELPRLP
Ga0127425_137594	Ga0127425_1375941	F003269	VKTRIRIRRRVLTWFVSRWRNHQLKQAEKPHSKFSARKTLDGPATRPKTPLAVENSV
Ga0127425_137599	Ga0127425_1375991	F060937	VAESGRKKVDGDAGIIPGDWGKVGTGWLAQPLEVRAARFGDWRQDSPVPLAGVATRRNANEELGG*
Ga0127425_137819	Ga0127425_1378191	F002020	FQVTRFPALLSTGMHGMEHCEPKRRAFRLSAPRWLSFSCRRINASWLAAAVSGSGPVARNGFSLARNSCRLLAASIPGSKLPACYFASFQMASVPVRPFGSTTASRIAPVAAASWPGTRCTSTTWFGLPRPQSPLPSGIFASLGIKAFNCVCCQPVRLTNPPDFPSLPAARPD*
Ga0127425_138104	Ga0127425_1381041	F036176	MKRFRIVGLCLAAIFALTALVATGASAETPPEVGRCLKLAGGKWKDGGCKVKSLPGEEKFEWYAAFVGGVPNTERGTPKLKYTSASKPETIIQLESVSGAVIKATSQSATGEVTGAKTNIAQNIDFKGVEFKGFKCTSTTPKGVGEGDVKVNNLNGNLGIEKKGETTAKDKAANRFVPKSGTTFTEFSCNVIPIIVRGAVLNPLTSNAMKGFPTPVTVKFTGANGKQKPSKFVGGPEETLESSIEGGPFEKSDQVLTTLQ
Ga0127425_138333	Ga0127425_1383331	F003391	MRKIRKITRDKKGIDTILAALLMVVIVVVAAVMVYAWSTGLLSALLVQNPVPKESMNFENFAFNTNNMNLTLNVRNTGSVAIAFASYYVKDSNGNQYARLSWPTDNAGKYPAAVNPNGLISVNIAISSACGSSCTGATYQFSSGLSYTVTLVTTRN
Ga0127425_138351	Ga0127425_1383511	F000611	TTMQTNMNFPTYVFATVNPGRSTKVVDELKHNSQIDIIAPVTGRWDLVLRLKPNTPHNIYQTVKEIREISDVRTTDTHSGFDGMQPSKKLESQMALGFSLLNVQHTSVENTIKQLSNISGFVEACTVPGQFDIVALWQARTSEDIVKASFEKVNHLEGIFSSETLLAYAPIFKA*
Ga0127425_138386	Ga0127425_1383861	F013305	VKGRFEQPEPVSNGLQAGFRALIRRSTKGAARSKEDSVQRLLTAKLMPCMPAGVELF
Ga0127425_138561	Ga0127425_1385611	F000611	NMNFPTYVFATVNPGRSTNVVEELKRNSQIDIIAPVTGRYDLVLRLKPNTPHNIYQTVKEIREISDVRTTDTHTGFDGITPSKKLENQMALGFSLLNCEHTTSEQVIKQLSSIPGFVEASTVPGQFDIVALWQAKTSEEIVKTSVERVSHLDGIFKSETVLAYTPVFKA*
Ga0127425_139120	Ga0127425_1391201	F079669	VAPGQRTAKSRGRPGAKWSRRGNKVANVSLTWFASRWRNHQPKRAKKPHSKIQRRKTLDGPATRPITPLAVENSVGKLTAPARAAPNVSAGKREW
Ga0127425_139195	Ga0127425_1391952	F036030	MSHPLETQIGEIRQYLEWEFPGQVRNTWWDEDVRAPVFEVIHETGCHHVIIDTGFIQGCQDAAASLRASELADYMREARAQERRFVVLAESGEVHIRSTAL*
Ga0127425_140556	Ga0127425_1405561	F032479	RGQRTMTYQWYDDTTVYSDRTAWVWVVGKLQLMPLRLGNALASERVPDRILSYVFTHKMLRKIHPRSTHSKRTALVHGLGGPKA*
Ga0127425_140759	Ga0127425_1407591	F033328	TNARMSLKASWIIPGDWGKAESGWLTQPLLKFDRKVETAEA*
Ga0127425_140901	Ga0127425_1409011	F002654	KGNSPEQVFKVPKFLLSESKEVFKLYNQEIGLEAAIF*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300010060: Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_0_1 metaT (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences