Sample 3300009387

3300009387: Microbial communities of water from Amazon river, Brazil - RCM24

Overview

Basic Information
IMG/M Taxon OID	3300009387 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0117984 \| Gp0126460 \| Ga0103871
Sample Name	Microbial communities of water from Amazon river, Brazil - RCM24
Sequencing Status	Permanent Draft
Sequencing Center	University of Georgia
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	97912340
Sequencing Scaffolds	72
Novel Protein Genes	81
Associated Families	66

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14
Not Available	43
All Organisms → Viruses → Predicted Viral	3
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium	1
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Aquatic Microbial Communities From Amazon River, Brazil And North Atlantic Ocean
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water → Aquatic Microbial Communities From Amazon River, Brazil And North Atlantic Ocean

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater river biome → river → river water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Amazon river
Coordinates	Lat. (^o)	N/A	Long. (^o)	N/A	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000203	Metagenome / Metatranscriptome	1619	Y
F000340	Metagenome / Metatranscriptome	1267	Y
F000344	Metagenome / Metatranscriptome	1257	Y
F000652	Metagenome / Metatranscriptome	959	Y
F000734	Metagenome / Metatranscriptome	915	Y
F000817	Metagenome / Metatranscriptome	879	Y
F000952	Metagenome / Metatranscriptome	822	Y
F001443	Metagenome / Metatranscriptome	693	Y
F001583	Metagenome / Metatranscriptome	668	Y
F001633	Metagenome / Metatranscriptome	660	Y
F001758	Metagenome / Metatranscriptome	640	Y
F001926	Metagenome / Metatranscriptome	616	Y
F002098	Metagenome / Metatranscriptome	593	Y
F002157	Metagenome / Metatranscriptome	589	Y
F002868	Metagenome / Metatranscriptome	524	Y
F003495	Metagenome / Metatranscriptome	483	Y
F005297	Metagenome / Metatranscriptome	405	Y
F005450	Metagenome / Metatranscriptome	400	Y
F005903	Metagenome / Metatranscriptome	386	Y
F007695	Metagenome / Metatranscriptome	346	Y
F008512	Metagenome / Metatranscriptome	332	Y
F009934	Metagenome / Metatranscriptome	311	Y
F010305	Metagenome / Metatranscriptome	305	Y
F011249	Metagenome / Metatranscriptome	293	Y
F011838	Metagenome / Metatranscriptome	286	Y
F014107	Metagenome / Metatranscriptome	265	Y
F014484	Metagenome / Metatranscriptome	262	Y
F014734	Metagenome / Metatranscriptome	260	Y
F014854	Metagenome / Metatranscriptome	259	Y
F015571	Metagenome / Metatranscriptome	253	Y
F016374	Metagenome / Metatranscriptome	247	Y
F018879	Metagenome / Metatranscriptome	232	N
F020700	Metagenome / Metatranscriptome	222	Y
F021290	Metagenome / Metatranscriptome	219	Y
F023129	Metagenome / Metatranscriptome	211	Y
F023544	Metagenome / Metatranscriptome	209	Y
F025670	Metagenome / Metatranscriptome	200	Y
F025755	Metagenome / Metatranscriptome	200	Y
F026473	Metagenome / Metatranscriptome	197	Y
F027192	Metagenome / Metatranscriptome	195	Y
F034812	Metagenome / Metatranscriptome	173	Y
F036080	Metagenome / Metatranscriptome	170	Y
F036126	Metagenome / Metatranscriptome	170	Y
F036206	Metagenome / Metatranscriptome	170	Y
F037987	Metagenome / Metatranscriptome	167	Y
F039529	Metagenome / Metatranscriptome	163	Y
F041277	Metagenome / Metatranscriptome	160	Y
F041602	Metagenome / Metatranscriptome	159	Y
F045132	Metagenome / Metatranscriptome	153	Y
F049019	Metagenome / Metatranscriptome	147	N
F052615	Metagenome / Metatranscriptome	142	Y
F053810	Metagenome / Metatranscriptome	140	Y
F056408	Metagenome / Metatranscriptome	137	Y
F059663	Metatranscriptome	133	N
F059886	Metagenome / Metatranscriptome	133	Y
F060922	Metagenome / Metatranscriptome	132	Y
F069751	Metagenome / Metatranscriptome	123	N
F071975	Metagenome / Metatranscriptome	121	Y
F080128	Metagenome / Metatranscriptome	115	Y
F081198	Metagenome / Metatranscriptome	114	N
F087216	Metagenome / Metatranscriptome	110	N
F093791	Metagenome / Metatranscriptome	106	N
F094801	Metagenome / Metatranscriptome	105	Y
F095354	Metagenome / Metatranscriptome	105	N
F096611	Metagenome / Metatranscriptome	104	Y
F100535	Metagenome / Metatranscriptome	102	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0103871_1000652	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2068	Open in IMG/M
Ga0103871_1000682	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2039	Open in IMG/M
Ga0103871_1001257	Not Available	1668	Open in IMG/M
Ga0103871_1001464	All Organisms → Viruses → Predicted Viral	1574	Open in IMG/M
Ga0103871_1001829	Not Available	1457	Open in IMG/M
Ga0103871_1002111	All Organisms → Viruses → Predicted Viral	1374	Open in IMG/M
Ga0103871_1002154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1365	Open in IMG/M
Ga0103871_1003333	Not Available	1148	Open in IMG/M
Ga0103871_1003597	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1113	Open in IMG/M
Ga0103871_1003758	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1094	Open in IMG/M
Ga0103871_1004044	All Organisms → Viruses → Predicted Viral	1063	Open in IMG/M
Ga0103871_1004450	Not Available	1027	Open in IMG/M
Ga0103871_1004463	Not Available	1025	Open in IMG/M
Ga0103871_1004926	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	983	Open in IMG/M
Ga0103871_1005291	Not Available	955	Open in IMG/M
Ga0103871_1005452	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	942	Open in IMG/M
Ga0103871_1006350	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	881	Open in IMG/M
Ga0103871_1006713	Not Available	859	Open in IMG/M
Ga0103871_1006714	Not Available	859	Open in IMG/M
Ga0103871_1006859	Not Available	852	Open in IMG/M
Ga0103871_1006945	Not Available	847	Open in IMG/M
Ga0103871_1006993	Not Available	845	Open in IMG/M
Ga0103871_1007072	Not Available	841	Open in IMG/M
Ga0103871_1007133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	838	Open in IMG/M
Ga0103871_1007447	Not Available	825	Open in IMG/M
Ga0103871_1007588	Not Available	818	Open in IMG/M
Ga0103871_1007602	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	817	Open in IMG/M
Ga0103871_1007770	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	811	Open in IMG/M
Ga0103871_1008025	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	799	Open in IMG/M
Ga0103871_1008060	Not Available	797	Open in IMG/M
Ga0103871_1008126	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	795	Open in IMG/M
Ga0103871_1008280	Not Available	789	Open in IMG/M
Ga0103871_1008631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	774	Open in IMG/M
Ga0103871_1008645	Not Available	773	Open in IMG/M
Ga0103871_1008656	Not Available	773	Open in IMG/M
Ga0103871_1008945	Not Available	763	Open in IMG/M
Ga0103871_1009065	Not Available	759	Open in IMG/M
Ga0103871_1009070	Not Available	759	Open in IMG/M
Ga0103871_1010142	Not Available	724	Open in IMG/M
Ga0103871_1010164	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	724	Open in IMG/M
Ga0103871_1010251	Not Available	721	Open in IMG/M
Ga0103871_1010745	Not Available	708	Open in IMG/M
Ga0103871_1011513	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	688	Open in IMG/M
Ga0103871_1011612	Not Available	686	Open in IMG/M
Ga0103871_1011799	Not Available	681	Open in IMG/M
Ga0103871_1012385	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	668	Open in IMG/M
Ga0103871_1012391	Not Available	668	Open in IMG/M
Ga0103871_1013571	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	644	Open in IMG/M
Ga0103871_1013767	Not Available	641	Open in IMG/M
Ga0103871_1013823	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	640	Open in IMG/M
Ga0103871_1013860	Not Available	639	Open in IMG/M
Ga0103871_1014086	Not Available	635	Open in IMG/M
Ga0103871_1014350	Not Available	630	Open in IMG/M
Ga0103871_1014957	Not Available	620	Open in IMG/M
Ga0103871_1014958	Not Available	620	Open in IMG/M
Ga0103871_1015212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei	616	Open in IMG/M
Ga0103871_1015389	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	613	Open in IMG/M
Ga0103871_1015404	Not Available	613	Open in IMG/M
Ga0103871_1015765	Not Available	607	Open in IMG/M
Ga0103871_1016764	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium	591	Open in IMG/M
Ga0103871_1017478	Not Available	581	Open in IMG/M
Ga0103871_1019013	Not Available	561	Open in IMG/M
Ga0103871_1020325	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	547	Open in IMG/M
Ga0103871_1021887	Not Available	531	Open in IMG/M
Ga0103871_1021915	Not Available	531	Open in IMG/M
Ga0103871_1022056	Not Available	529	Open in IMG/M
Ga0103871_1022543	Not Available	524	Open in IMG/M
Ga0103871_1022642	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	523	Open in IMG/M
Ga0103871_1023594	Not Available	516	Open in IMG/M
Ga0103871_1024698	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea	506	Open in IMG/M
Ga0103871_1024801	Not Available	505	Open in IMG/M
Ga0103871_1025499	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	500	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0103871_1000652	Ga0103871_10006522	F093791	VSEQQDKALGVLDRVLAYVDSPFKLIALLIMFVFGFCAWFVYSNQELLVGAYKESQKLPSINEARADDVANMLFKYGNASTVAIFKVNPLFGTRVLYRAYTKDGRDKRMEGIDVGLFTQNPNNNADVVKLMAGETPCGDYHKPQSEIGLWYVEVGVTHGCRISVPPDATRFIGQITVGFKDRPESIEDVQSLLGIASTMLTRKSY*
Ga0103871_1000682	Ga0103871_10006822	F000952	MKSDAEQQSVNVPQHKRIAMGVKLDGTSYQSKGGSSSGKPVGGLAQAKKK*
Ga0103871_1001257	Ga0103871_10012571	F100535	AWLLGQVNSFSERLTKVEGSMPALITKEGIPTDSPISAERRHMLEEEIYRDIHQLQVKVQLLEEHERMGKK*
Ga0103871_1001464	Ga0103871_10014642	F000952	MATSDQEQKGINVPQHKRLAAGEKLNGQSMQSKGGSQSKHSGGGLSHAKKK*
Ga0103871_1001829	Ga0103871_10018292	F021290	MRAREFVTEAVYTPGNRTKPRHEFERAHPGMVMPGGKGDLYWGRYYDFYRVCSLAGMSPDDIDKVDEIGFFGNLPMFSAYTDYDREKLMAIMKKLQMHPKDGVSKGSREIDSVNNASPVQSFRGYGK*
Ga0103871_1002111	Ga0103871_10021113	F011838	MSDALKYLSDKFQTDLKRLEEDIARGGAEDFAAYKYACGVYRGLLMANNHIIELAQRLEKDDD*
Ga0103871_1002154	Ga0103871_10021541	F049019	MSLQENQFFLRALIDGQHLISTKGYPIMNRRVIQRRKLQMRTSRKLTHVLFAVFTLAIMSMAALAADPGTSLPASSGASDQKQGSLLIYSHYDSVTSNVSANDTRINITNTHVTASVVVHFFFVSQSCNIADFKTELTQSQTYSFLVSDFDPDTKGYIMAVAEAENGLPIAANYLIGDLFVKSSTGPVSANLGAIAFAALWDGTNNGNNPNAEGFWPIPGGDATTPSVNITFGGNYNSLPRTLAVDNIPSYAGGDRTLLVLLTPVQSFVTGGGAVGTLFGLLYDDAEQSQSFQISGGSCQSATVISDSFPRTAPRFTTVVPAGRTGWMKVYKTSDLGILGSVIVYNIGGRDVNFHGGHNLHHLTLSGSQTATLPVFPFELQTN*
Ga0103871_1003333	Ga0103871_10033332	F002098	MGFRKAADGITKMGKTKGKNLGDSGPTVGIQNGPKATGSKGGKTNADMKKMGRGLAKVAAQKKG*
Ga0103871_1003597	Ga0103871_10035972	F005903	MIVYDPRGMTWDQYVKLMAELFAPNQLGYVPEEKWRDWVDGMNGIGYFVQSSVPDHRSYQKWQDW
Ga0103871_1003758	Ga0103871_10037581	F002868	VSEDNKLNANDTLSKVLAYVDSPFKLFALVLMAVLSFSGYFVYENKDLLVGAYKESKRTPDINEDRAEDAAAMLFKQTGAQFVAIFKVNQMFGTSMSPYSEAYYNS
Ga0103871_1004044	Ga0103871_10040442	F016374	MNKEITLTPDSGNFYRAMAFHYATVAVMISPLFLALVLAIINPFWFRDSMFNFVERKVNQFTRWRNNLKYHIYLGCDPKVWHTLKGDL*
Ga0103871_1004450	Ga0103871_10044502	F053810	MSLSVRPVDANFVQQVWPMVEGYLQSALEKDGACTDYNIHHIQTFLTSGQWLLVVAVDEDSKIHGAMTVSFVNYPLHRVAFVTATGGKFIANSELLDQLKVLVKLRGATKIQAFGTS
Ga0103871_1004463	Ga0103871_10044632	F000340	MAWSDVLKAVIPIVVACIAWLLGQVASFSERLTKIEGSMPALITKEGIPTDSPISAERRHSLKEEIYRDIHALQVKVQLLEEREKMGKKP*
Ga0103871_1004926	Ga0103871_10049262	F071975	MTVDVVVYVSSVANAHKFPRKTACLENFAQGVKTAGATVAIEKAYKYTPSRLAVVLGWATTNTGGRNIMLRKQIIA*
Ga0103871_1005291	Ga0103871_10052911	F081198	IASHGTHGDVQESITTSGTIPGVVTSSDVAIQVGSKTVKPIRQYGQFQAIPTGQNTARFYRISVPDAGAITESPTTDITAATHTLTSVDITCSIRGWRQTVKKQELENYPASFLNALRETARLEAIRDEHKLIVQALGSLSVDFGGTTTAPYHISGSDGTAVTTGTLEDATGEFDEDGITFAKRYLEQLGQDTSPGNLIAFISPRAFRSLITSSGLTSYTQIGFANVTQLGQLEQLFGVDIVVTNELKTNANSYRNIVAVKGKAWALASQREMEIELQKLIKGQYWDVVWTHRIGCDVIDPNTYVIVSSKQD*
Ga0103871_1005452	Ga0103871_10054521	F016374	MNKEITLTPEGGRFYRAMTFHWATVAVCLPPLILCMIIAILNPFWFRDSMFNWVERRVNAFTRWRNNVKYRIYLGCDPVVWHLDVAL*
Ga0103871_1005452	Ga0103871_10054524	F056408	LDDKFKETWSTMTPADLEKFVTHFAELLIRDCADTAYNNSSLTLGQGYTVAKDIKRHYGVDL*
Ga0103871_1006350	Ga0103871_10063502	F036206	MNMIPKVKTVKCQPQIGTGITEDRLSSPGEYQSGKLPSGGFQSVWNFKNGQTNDYFSRKSSPTSGGGKKVY*
Ga0103871_1006350	Ga0103871_10063504	F005297	MSWADVLKAVIPIVVVCLAWLLGQVNSFSERLTKIEG
Ga0103871_1006713	Ga0103871_10067131	F041602	MEKQVVKISQQELINILNTIEKPTFCNILTETMVKMNKGKTNEGTKENNPYHNKVVKVKSGNFLIGIDYQRRVQGNDEKEGGEGNFESQENKVGVHISKCILYNENTNKHYLFHERFDEVKPKVEYLHEGNPIEEQLFSKWVTSTSNYESQPRDRKVKVMSVTLDNIKGITLEGTKYVIE
Ga0103871_1006714	Ga0103871_10067141	F007695	MAADLELSGQDAETSYRRVLVWFAGRWRNHQSKRAEKPHSKSSGGDALDGPATRPETPLAVENSVGKLAAPEAPNASTGKRAWRTPIPHFGPCLGVKTR
Ga0103871_1006859	Ga0103871_10068591	F045132	VLIYSSNPYPLGNCDSPRPETSLSYLTQLGAVSYRTSLPSPFFALTDGARTPPEELVNPASASECVSTRLQRGVVNQPDPAFPRSPGRILETSASKLLLTGLRLSSR
Ga0103871_1006945	Ga0103871_10069451	F014854	RTAVIERKSLVVSGIIPGNWGKVEPGWLARPLLNRIARFGGGGRIHQFLWSRSHAVSYAKRNLAARGDKKPLRVGSSSSGRFRAWANRSYPEGKWLLLCIGTGRVTLADSINRLKPPNESHRKVDKGSTRTGKITQARQAA*
Ga0103871_1006993	Ga0103871_10069931	F014854	RTAVIERKSLVVSGIIPGNWGKVEPGWLARPLLNRIARFGGGGRIHQFLWSRSHAVSYAKRNLAARGDKKPLRVGSSSSGRFRAWANRSYPEGKWLLLCIGTGRVTLAGSINRLKPPNESH*
Ga0103871_1007072	Ga0103871_10070721	F080128	VALANALPKAVADQSQVVKTRKENRRRVLTWFASRWRNHQPKQAEKPHSKFSGANRWTALLRGRKLRLPWRMASGSRQPLKSVRPMSAREREPGELPSPDLSLLDRKVGQGLLK
Ga0103871_1007133	Ga0103871_10071331	F000344	MRPESPHAAESGVGKRTARESERVQACAAGKERVTNAHPHFLAPGPQGPGAKKF
Ga0103871_1007447	Ga0103871_10074472	F007695	VKRRDPWFEENALPKAAAALGLSGQDADESHRSVLIWFAGRWRNHQSKRAEKPHSKSSGGNALDGPATRPETPLAVENSVGKLAAHEAPNASTGKRAWRTPIPHFGPCLGVKTR
Ga0103871_1007588	Ga0103871_10075881	F069751	VVSGQRIAKSGGCPDASGEDADASHKRVFTWFASWRRKRQLKQAKRPHSKSSCREALDGPATRPTTPLAVENSVGESAVTCVTPNVDIGKESVASSHPPLCPCLVARPG
Ga0103871_1007602	Ga0103871_10076021	F005450	MDAKQVKGIAKKEVKAHEKRMHGATKMAKGGVTTDMMKKYGRNMARVIN
Ga0103871_1007770	Ga0103871_10077701	F000344	MRSKAALAALSGVGKHTARESESAQACAIGKERVANAHP
Ga0103871_1007959	Ga0103871_10079591	F037987	GMGVRHALFPEPTFGALLFKEAVGFPTPFSTASGVSGLVAGPSDALRRADFE*
Ga0103871_1008025	Ga0103871_10080254	F094801	MDEIKLKTDLVNAILQYLGNRPFVEVAGLIQGIQQQAAEQGAQPAAAPVEAAPE*
Ga0103871_1008060	Ga0103871_10080601	F036126	VNSASPKLALRFVRSQINQPDLTFPQLPGIIRETY
Ga0103871_1008126	Ga0103871_10081262	F025670	SLVCQHEGRTKEMIPYQTLSQGSQYNLQESVAPGFHVYQARVKVKNDLYSNSMDVAIFAKNGLMARQLLMAQYGRDSVITNVVQIA*
Ga0103871_1008236	Ga0103871_10082361	F052615	VARGQRIDKTDGRPHANWTRRGAEIINVSCPGPQAGGATTSRSGLRGLTQNFSVRKPLDGPAMRPMTPLAVENGVGKLAASKAPNASTGKRAWRTPTPHFVPVRPKGR
Ga0103871_1008280	Ga0103871_10082801	F041277	MRPETPLAVENSVGKPAAPEAPNVGMGKRAWRTPI
Ga0103871_1008297	Ga0103871_10082971	F000203	PILGVRHALFPMLTLGAVQAASFPTPFSTASGVSGLIAGPSSGSRHLDFE*
Ga0103871_1008631	Ga0103871_10086313	F001926	VRHEDIPETNNPKIRFPVLEGDKLMKEVLNGGYNVHPVPPPNSDIKERIRRRYERKRIKIEKLLILGYTTSGDP*
Ga0103871_1008645	Ga0103871_10086451	F008512	LLLWISTVRTALAGANKIETAQRKTPKGGQKERTHREEHGNLAGSVKNFQRPAMLKTTPLDCEIKSSLREKRRDPWFGVNASSKAMAVPGPVVKTRENIIGVS*
Ga0103871_1008656	Ga0103871_10086564	F000652	AKLEGQGMKTVRVETLLAQELEVPEDWTREHVYDFLAEYQSFRDTFQGVSDTDQTARIVDVMVVEERVTELGDEAYDD*
Ga0103871_1008945	Ga0103871_10089452	F045132	VLIYSSNPYPLGNCDSLRPETSLSYLTRFGAVSNHTLSPSSFFAFTDSARTLPEELVNPASNFECISTRLQRGLVNQ
Ga0103871_1009065	Ga0103871_10090651	F060922	LEVSKIIPGDWGKVGSGWLIQPLSNRIARCGGGGRIHQFL*
Ga0103871_1009070	Ga0103871_10090702	F059886	VTYASGPAFAAWRGEQHQLPLTFPRSPGIIPAVFSEAPFR
Ga0103871_1010142	Ga0103871_10101421	F005450	MDKMKKVAKAEVKAHEKRMHAAKMAKGGKTNAQMKALGRGLAKVANQK
Ga0103871_1010164	Ga0103871_10101642	F014484	LKNAYRSDFTVAGGKTPEAVTTNDMPMGNTSPMSKVKRPANPATGAQPRG*
Ga0103871_1010251	Ga0103871_10102511	F023544	METNDDEVSINEDYYMQGNLAAGVEGALHQNDKLYNEVKSGTWSQTFDTGNLKYTVGALDGNRYVQYDQKNVEQIRQYCKERREFYQAMGTTDNPIFPGTFEAMNLPKCFAHEISSKWFGTS
Ga0103871_1010251	Ga0103871_10102512	F018879	NYTYQIDDSWVMDQTGSDSNSVLFLNPDVVQWGSLRELGPNNEVFSNADASLDQYIMEGTLIVRNPAGVAVLVAINNDTSAVVTTPRASGQVVRYTS*
Ga0103871_1010745	Ga0103871_10107452	F014734	MAESTQSEKGIFIEKLLFALLPLIIAGVGYLLNAVSQLNHQVTILESKVSLVVTTDNKQASNTGAELAREKLRQDLEKEIQKNRDDIQLNRERIAVMEERLKQLKGK*
Ga0103871_1011513	Ga0103871_10115131	F002157	VGSAQAANVPVIVRDDTGAQIATDTLNLPANAHTSFTLGVDKYTVAAGKRGTIEFVTPAGGQIGVLGIRIPPTLTFTTLPALAK*
Ga0103871_1011612	Ga0103871_10116121	F020700	MTARLSLHLRFARLCPKTLQGAFSDAAAGIAATSIRLRISVLFQAVKPEKV
Ga0103871_1011727	Ga0103871_10117271	F009934	MRPQTPLAVENGVGKPATPVREVPNAGMGKRAWRTPIPHFVPVGPKG
Ga0103871_1011799	Ga0103871_10117992	F001443	MYETTVKTAEGEKKVRVYAPDVKEAKKLFESLYGGPRNVPYIPHVVPS*
Ga0103871_1012385	Ga0103871_10123852	F000340	MNWSDVLKAVIPIVVMSLAWLLGQVNSFSERLTKIEGSMPALITKEGIPTDSPISAERRHVMKEEIYRDIHQLQVKVQLLEEREKMGKK*
Ga0103871_1012391	Ga0103871_10123911	F041602	MEKQVVKISQQELINILNTIDKPTFCNIVSETIVKMNKEKTKEGNKEFNPYHNKVVKLRKGNFLIGSDYEKRVNNNDLKEGGEGNFESQESKVGVHISKCVLYNERLGKHYLSHERFPEVKPTNEFIFEGNTIDKMIFDKWVSDSNNYENQPQERKVVWT
Ga0103871_1013571	Ga0103871_10135711	F003495	MKENNENEISNCDEISKLTNAPPKDTAALDKRSVLAKVNSQGSGR*
Ga0103871_1013767	Ga0103871_10137671	F041602	ELINILNTIEKPTFCNIVSETIVKMNKEKTKEGNKEFNPYHNKVVKLRKGNFLIGSDYEKRVNNNDVKEGGEGNFESQESKVGVHISKCVLYNERLGKHYLSHERFPEVKPTNEFIFEGNTIDKMIFDKWVSDSNNYENQPQERKVVWTTLTIDNIREISLNGEKYVIE*
Ga0103871_1013823	Ga0103871_10138232	F014107	MSLTNILSVCESVGINDQRFVGQTISRNQKIVTSEVLTVVPFVFELRPMNYLQYSQSRTILNSLRIADKSLEQYLNFSSTGWVNYIKYQGQMTSGQIAACQWQTSSANKTLVLGSLPSVASTTYLFRIGDFVQVGRYAYIVTDDVQRGSGST
Ga0103871_1013860	Ga0103871_10138601	F011249	MSKTGTLLSLGGIAGLAIAASVAATMPAFANGGDFFNELSESWGSNADTGVPFFGWVRDTKGKAIARAIVTATVQNGPDGQSVTIISDNLGHYKIPGLGKEVLAKDVVIDCAKAGYRAVAQDRRVLRSLPKAPIEVDCKLSPVAAQS*
Ga0103871_1014086	Ga0103871_10140861	F087216	RIPRIVCSIHLGQQLALDPHFACSRCFLLSQAASCGICLGSGLANQPGKPIRSSGLYLAFNTFLFSSTSSSL*
Ga0103871_1014350	Ga0103871_10143501	F000817	DERRSLVVSRIIPGNWGKVEPGWLARPLLNRIVRFGGGGRIHQFL*
Ga0103871_1014957	Ga0103871_10149572	F014854	KSQVVSGIIPGNWGKVEPGWLARPLSDRIARFGGGGRIHQFLWSRSHAVSYAKRNLAARSDEKPLRVGSSSSGRFRAWANRSYPEGKWLLLCISTGRVTLAESINRLKPPNESHRKVDKRSARTGKITQARQAA*
Ga0103871_1014958	Ga0103871_10149581	F023129	VKRRDPWRRANARPKAVADPVLSGEDAELKSQPCLDLVRKPVAQPPAQ
Ga0103871_1014958	Ga0103871_10149582	F014854	KSQVVSGIIPGNWGKVEPGWLARPLSDRIARFGGGGRIHQFLWSRSHAAGNANRNLAMRSDEKPLRVGSSTSSEFRAWGNRSYPEGKWLLLCISTGRMTLADSINRLKPPNESHRKVDKRSRRTGKITQARQAA*
Ga0103871_1015212	Ga0103871_10152121	F001633	PDATLRGMRMFRSHGGTVRTVTGPDLSSEASAPGSDASCRKRLAGRGADTPAIFMVSRLHRVHGDGASFWPAVGPALRV*
Ga0103871_1015389	Ga0103871_10153891	F026473	PLMACSNTTGNTTVNVDQLISYAYRDAGKQAEEMTPEYVQAAKQALFYNLMDLSNMGVNLWLLENQLYGAVTAQQQLYLPKTTIDVREANWVYIINSEAASYLPVDNPESPVAFDQNLYNVATSTLSENYLGLQYQQAQPVFYVGWNGYALPNETTTYNLAYEVSDDGVVWTTIQTFPETTLADREWVYFNIAITPNHLYYRLR
Ga0103871_1015404	Ga0103871_10154042	F001758	VTGEKLDQAGWFNSSQAGPQGSGAEAGFTSSSGGVRAPSVNAKKELGIEER*
Ga0103871_1015765	Ga0103871_10157651	F045132	VLIYSSNPYPLGNCDSLKPETSLSYLTRFGAVSHRTSSPSPFFALTDGARTPPEELVNPASAAKCISTRLQRGLVNQPDPAFPRSPGRILEPSA
Ga0103871_1016764	Ga0103871_10167641	F027192	AIAQTEAEALVTGEVVSALVLVNVDGDWGVFAAGNTYVITPAGFKNPPGPGEGAGVVVGPVGFEVDGIGGEDVIVNLVLPGAMNSDDDAAGLPLSNWTYGWNYDNDPGASFAASGAVTGNAVALSINSNAATGLFLGATVTVPPTAFPGTYTAQIIGSAVYTGN*
Ga0103871_1017478	Ga0103871_10174781	F010305	LKQAEKPHSKFSDRKTLDGPAMRPETPLAVENGVGKLAASKRAPNVSLGKREWRTPIPKFCPHL
Ga0103871_1019013	Ga0103871_10190132	F096611	MDDKMRAEEFITEWRPSKHDCESPKRKSRSVYSSCVSQGYIAHQSKGKGHTDGHGNYLKGHKAKGKKYGGDVPDYT*
Ga0103871_1020325	Ga0103871_10203251	F015571	PPKEQLASKFGLRLFVSEVPMNDFRCAIANDIADDLFQTYKSQTDEIVTHILVEQKTRFMEVMKSISHCCGYDDMGVDDNTGETKLRKRKIYDSTIQKALDMCDSFKGFNLTNDPALEEARASLEKALSGVDAEIIRESDAVRTSVKEEVDSILTKFGAFQCV*
Ga0103871_1021887	Ga0103871_10218871	F025755	AFSQITISGYSEVGFITGTNKNGSSTTNLASTSKNLGGETVITVAGKGKTSNGWEYSVYQNFDTDEVGQGRNIGSTMSMTTRAIEISPIKDFKLFYSYDGVYGGEIARTAVPTVTERVADQTGFSGLSEFIDVTSGGHVVGFDILNVGPNGRLSVAYNPNLDALPQQSSDRLYSGT
Ga0103871_1021915	Ga0103871_10219151	F000734	VKTFREVGDVKNDTADLWTKGNLRVKRRDPWHRANALPEAAADPKLSGEDADKNTQTCL
Ga0103871_1022056	Ga0103871_10220564	F001443	MPLYETTVRTPQGDQKKQVYADTPQEAKKIFEQLYGGPRNVPYIPHIKPS*
Ga0103871_1022543	Ga0103871_10225432	F059663	FFAGFRAKIVYSWGATGARRIAMLTSLFVVISVVIAFLATTGITNALKTDNPVCVDGPCNKFVDSQTTSLGTYTHIGVVYNMNSNMTWGPAAGWFLFLACIPLSLLLTIVAGLNNYPVPIDSLGSGEAL*
Ga0103871_1022642	Ga0103871_10226421	F034812	LHLEGPLEHQRNITASVRGNSQESKGGRSILEGGILEMEKEANKASGNVRF*
Ga0103871_1023594	Ga0103871_10235941	F052615	VALGQRTVKSGGRPGAKWSRRAKEVIDVSWSGSQAGGATISPSELKSLTRQFSDRKALDGPAMRPGTPLAVENGVGKLAAWKGA*
Ga0103871_1024698	Ga0103871_10246981	F001583	FFFHVIVFFGISLSATHLSDLTLTIGANIFSLFNFTYKTYYIIFTNKHLNVDQLTRLMVLHYFTPYYLYLVKLHILFCHESDTDSGENILEDKSGTYVSFYDAMLKEFQDAYTLLVFSYFIEHHFNPSTVNYFFFERNISELEEIRFYGVAPH*YFRPLM
Ga0103871_1024801	Ga0103871_10248012	F036080	MKYDLESAIHVAWQTSEDIDLLYHYPKPMTEDQISTVLLGIKALHEMRMDKLFDTFKREFGLDEYCTDPDALAARERLFSELNPKKKGKKNVKV*
Ga0103871_1025499	Ga0103871_10254991	F039529	PGVQNLDLVSSDEYLLGLIRDGMKFREGPKVRNAGGSLAAVSKPVAKAKTAPEDKVTELQKKAQSGDKNATRDLLATMLASNKRKRS*
Ga0103871_1025499	Ga0103871_10254992	F095354	MSTITSANLGNGNGSYTTDIVVKDLDMTVSNYVKDRTPITNMAMSKKRKVNSTLHIWPVDYYRTPALNASKPES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300009387: Microbial communities of water from Amazon river, Brazil - RCM24

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences