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Sample 3300009325
3300009325: Processed tobacco microbial communities from USA domestic dry snuff from retail store in Atlanta, GA, USA - Dry Snuff D1 2x mi-seq runs combined
Overview
Basic Information
IMG/M Taxon OID 3300009325 Open in IMG/M GOLD Reference Gs0114789 | Gp0115765 | Ga0116603 Sample Name Processed tobacco microbial communities from USA domestic dry snuff from retail store in Atlanta, GA, USA - Dry Snuff D1 2x mi-seq runs combined Sequencing Status Permanent Draft Sequencing Center Centers for Disease Control and Prevention (CDC), USA Published? N Use Policy Open
Dataset Contents
Total Genome Size 63665558 Sequencing Scaffolds 2 Novel Protein Genes 2 Associated Families 2
Dataset Phylogeny
Taxonomy Groups Number of Scaffolds All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae 1 All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Cordycipitaceae → Beauveria → Beauveria bassiana → Beauveria bassiana D1-5 1
Ecosystem and Geography
Ecosystem Assignment (GOLD)
Name Processed Tobacco Microbial Communities From Usa Domestic Dry Snuff Type Engineered Taxonomy Engineered → Food Production → Unclassified → Unclassified → Unclassified → Processed Fermented Consumer Product → Processed Tobacco Microbial Communities From Usa Domestic Dry Snuff
Alternative Ecosystem Assignments
Environment Ontology (ENVO) Unclassified Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant corpus
Location Information
Location Georgia, USA Coordinates Lat. (o ) 33.733333 Long. (o ) -84.383333 Alt. (m) N/A Depth (m) N/A Location on Map
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Associated Families
Family Category Number of Sequences 3D Structure?
F037234 Metagenome / Metatranscriptome 168 Y F062378 Metagenome / Metatranscriptome 130 Y
Associated Scaffolds
Scaffold Taxonomy Length IMG/M Link Ga0116603_104711 All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae 3798 Open in IMG/M Ga0116603_113435 All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Cordycipitaceae → Beauveria → Beauveria bassiana → Beauveria bassiana D1-5 885 Open in IMG/M
