Sample 3300007616

3300007616: Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_A_H2O_MG

Overview

Basic Information
IMG/M Taxon OID	3300007616 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114514 \| Gp0125934 \| Ga0102936
Sample Name	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_A_H2O_MG
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	409429768
Sequencing Scaffolds	54
Novel Protein Genes	64
Associated Families	31

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	29
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	1
All Organisms → Viruses → Predicted Viral	5
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	3
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-6	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum aethiopicum	1
All Organisms → Viruses → environmental samples → uncultured virus	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum persicum	1
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Chromohalobacter → Chromohalobacter salexigens	1
All Organisms → Viruses	2
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella viridis	1
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Siphoviridae sp. gcode 4	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Salt Pond Water, Soil And Salt Crust Microbial Communities From South San Francisco Under Conditions Of Wetland Restoration.
Type	Environmental
Taxonomy	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water → Salt Pond Water, Soil And Salt Crust Microbial Communities From South San Francisco Under Conditions Of Wetland Restoration.

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	aquatic biome → pond → saline water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	South San Francisco, USA
Coordinates	Lat. (^o)	37.4958	Long. (^o)	-122.1331	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F004256	Metagenome	446	Y
F008719	Metagenome / Metatranscriptome	329	Y
F016383	Metagenome / Metatranscriptome	247	Y
F018106	Metagenome / Metatranscriptome	237	Y
F026202	Metagenome	198	Y
F029568	Metagenome / Metatranscriptome	188	Y
F032166	Metagenome	180	Y
F038111	Metagenome	166	N
F041612	Metagenome	159	N
F054456	Metagenome	140	N
F061556	Metagenome	131	Y
F062297	Metagenome	131	N
F062489	Metagenome	130	Y
F066493	Metagenome	126	Y
F066527	Metagenome / Metatranscriptome	126	N
F066711	Metagenome / Metatranscriptome	126	Y
F072017	Metagenome	121	Y
F073275	Metagenome / Metatranscriptome	120	Y
F076468	Metagenome	118	N
F079661	Metagenome	115	Y
F085171	Metagenome	111	N
F088354	Metagenome	109	Y
F089905	Metagenome	108	N
F089940	Metagenome	108	Y
F090210	Metagenome	108	Y
F094957	Metagenome	105	N
F096726	Metagenome	104	N
F097996	Metagenome	104	N
F099972	Metagenome	103	Y
F100063	Metagenome	103	N
F104555	Metagenome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0102936_1002405	Not Available	7278	Open in IMG/M
Ga0102936_1004160	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales	5464	Open in IMG/M
Ga0102936_1009894	Not Available	3520	Open in IMG/M
Ga0102936_1010139	Not Available	3472	Open in IMG/M
Ga0102936_1016983	All Organisms → Viruses → Predicted Viral	2626	Open in IMG/M
Ga0102936_1019635	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	2428	Open in IMG/M
Ga0102936_1021274	All Organisms → Viruses → Predicted Viral	2324	Open in IMG/M
Ga0102936_1024250	Not Available	2158	Open in IMG/M
Ga0102936_1029639	Not Available	1925	Open in IMG/M
Ga0102936_1030811	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-6	1884	Open in IMG/M
Ga0102936_1038115	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum aethiopicum	1671	Open in IMG/M
Ga0102936_1039174	All Organisms → Viruses → Predicted Viral	1645	Open in IMG/M
Ga0102936_1040571	All Organisms → Viruses → environmental samples → uncultured virus	1612	Open in IMG/M
Ga0102936_1057021	Not Available	1317	Open in IMG/M
Ga0102936_1065012	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1214	Open in IMG/M
Ga0102936_1067398	Not Available	1188	Open in IMG/M
Ga0102936_1071612	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	1144	Open in IMG/M
Ga0102936_1072045	All Organisms → Viruses → Predicted Viral	1140	Open in IMG/M
Ga0102936_1078745	All Organisms → Viruses → Predicted Viral	1077	Open in IMG/M
Ga0102936_1081236	Not Available	1056	Open in IMG/M
Ga0102936_1083158	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum persicum	1040	Open in IMG/M
Ga0102936_1083159	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
Ga0102936_1083790	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	1035	Open in IMG/M
Ga0102936_1085742	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Halomonadaceae → Chromohalobacter → Chromohalobacter salexigens	1020	Open in IMG/M
Ga0102936_1093219	Not Available	967	Open in IMG/M
Ga0102936_1099115	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	929	Open in IMG/M
Ga0102936_1105027	All Organisms → Viruses	895	Open in IMG/M
Ga0102936_1110732	Not Available	865	Open in IMG/M
Ga0102936_1111017	Not Available	864	Open in IMG/M
Ga0102936_1112701	Not Available	855	Open in IMG/M
Ga0102936_1114078	Not Available	849	Open in IMG/M
Ga0102936_1124584	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella viridis	800	Open in IMG/M
Ga0102936_1129528	Not Available	780	Open in IMG/M
Ga0102936_1130270	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	777	Open in IMG/M
Ga0102936_1137164	Not Available	751	Open in IMG/M
Ga0102936_1143650	Not Available	729	Open in IMG/M
Ga0102936_1143761	Not Available	728	Open in IMG/M
Ga0102936_1145126	Not Available	724	Open in IMG/M
Ga0102936_1150666	Not Available	706	Open in IMG/M
Ga0102936_1157196	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Caudoviricetes sp.	687	Open in IMG/M
Ga0102936_1158594	Not Available	682	Open in IMG/M
Ga0102936_1162269	Not Available	672	Open in IMG/M
Ga0102936_1164233	All Organisms → Viruses → environmental samples → uncultured virus	667	Open in IMG/M
Ga0102936_1172026	All Organisms → Viruses	648	Open in IMG/M
Ga0102936_1181563	Not Available	625	Open in IMG/M
Ga0102936_1198128	Not Available	591	Open in IMG/M
Ga0102936_1217508	Not Available	556	Open in IMG/M
Ga0102936_1223892	Not Available	545	Open in IMG/M
Ga0102936_1224236	Not Available	545	Open in IMG/M
Ga0102936_1225520	Not Available	543	Open in IMG/M
Ga0102936_1237979	Not Available	524	Open in IMG/M
Ga0102936_1246328	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
Ga0102936_1248147	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Siphoviridae sp. gcode 4	510	Open in IMG/M
Ga0102936_1251621	Not Available	506	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0102936_1002405	Ga0102936_10024052	F073275	MTKYLKVDLENCYGVSLCGTKEEVIEGCGYDVDEITFVELLVEMEGVYEIIEVKGEFELKWLTEE*
Ga0102936_1004160	Ga0102936_10041605	F100063	MSETCEVCGQFTGQTESFDLWIRGLDRRGEGERIEIDVSGVSVGECCGLGVLQGPDETRVDRSYQRYLNGTPDGELRYVVMIRDEIETDSDTEEVEIDTNSVQLHPITGNHLPESIDGYVIGKID*
Ga0102936_1009894	Ga0102936_10098943	F089940	MKYAAAFFIVLGLGIVAGAETQDWFPMFAAQVALGVVTLITGGLFATQIDTDD*
Ga0102936_1010139	Ga0102936_10101392	F029568	MKYRYDLKDTHVKIFYDATDEFEEVRTLCLKEKNWLRENYTRGNLKIEQHSGYGVLFKTSTGEPMVMGGVFNDGRYPSNVAKQINRLYTFPKFRMTRSDMTDGFRCTCKLIDALSAVNDYEIYLITMQNRPNRKNKGFWNLWCKHMNIASKGAWNLGEGYIQTCPWNVQKCWQNFVWQEKKEGTFREWWPKTIDHVEWLSLEEGK*
Ga0102936_1010139	Ga0102936_10101395	F004256	MSEDKKVFVQWFYNDGEYHKGQNEVLDPKLMGEKFNREIYYLKIMKENYPDLVPDYSLDLDDRKVFLQVDGKDFWNRAKCSVENYSNVIPDWKQQMLDILEKHKNLGLFKFSLHPSSYFIVNRKLKSINYFFTYHKNEGPISISDHASHIYSSRQDTMQKQIESMGISWNNPEPLEKLQILCFESFRSNYTDDFINQAKEIYYD*
Ga0102936_1016983	Ga0102936_10169834	F089940	MKYLSAFFIVLGLSIVIGAEAQDWFPMFAAQIGLGVVTLIAGGLFASQIVIENE*
Ga0102936_1019635	Ga0102936_10196354	F096726	MTRDEWIDPADTEASIREHVERLARGDRLDVDTPTGTERIERRGPEWRLTHLGTGGGWCWSERMDTRQLVDYLTQWRSQSQYDPITVRFVEDGGE*
Ga0102936_1021274	Ga0102936_10212743	F066711	VAKVIRTRWYSFIGDCYEYHGQDPSSRERTHSDVGWRLRSKNYRGVSTFKNLPLSESLEQRLCPLDERDSGIYILRDSIFPEGFYVGKGKKMHERIWKHGVKLTGTQRWNKAVETTVEFERYRKLREAKGLNTLEDVEIAFWFTDKIDELEDQILGAYTAKYNRTPFCNSAEEAMFEAFDI*
Ga0102936_1024250	Ga0102936_10242501	F066527	MTNRFYHEDLLDEFGDDLERIFGPVEERTRGLTSLAGQPDGDLKALIKGLKTKVIDCSGFMPKRQPFLNVVKEVLRVMRDSIDPATGKSIFYGYNLPYFITEERVQGVEEFAWDEIYIDYNVQRNIDVAHIIKDILVEWDTKLCDPAHC
Ga0102936_1029639	Ga0102936_10296392	F062489	MTGPDAIVIREEVTAGPTRRYVYHPLAAGGYERKTQLWRQATDGWHTTGTEVVESLAIDTPEGRR*
Ga0102936_1030811	Ga0102936_10308115	F061556	MLTNQTYRLATKTPKGEVIAFGPLMSRAIAERKRIEVARLAPSYPVYIVNTLAQ*
Ga0102936_1038115	Ga0102936_10381153	F066493	VSQSREWTDGVIDVADELVQEHSAEGAIEHLQRRRQTSDDELQARCNEAIAWIRREVQSDD*
Ga0102936_1039174	Ga0102936_10391741	F094957	MKALTGYMAQINAHLAIFGEAPLDPYRDYAEVRRAVEVLGSPEILAKDGELTREEVEARTNTWLDAITELDAIEQELTA*
Ga0102936_1040571	Ga0102936_10405713	F072017	MSKSTTSSLKTQSDTNIKSTVHKHDAIHRLTQEHIDVLTADDRLLDFYEWQQVIRSSETTVRRLAYSEIEEGVDQ*
Ga0102936_1057021	Ga0102936_10570214	F089905	MRTVREIEQDIREAEEAQAETEFSSTSWDSLNAEITGLHRELKRATYHWDRLRLCGMMGVDTHTR*
Ga0102936_1065012	Ga0102936_10650123	F089940	MKYIAAFLIVLGLAIVGGAEAHDWFPMFAAQIALGTVTLFSGILFAIEVDEWYE*
Ga0102936_1067398	Ga0102936_10673982	F054456	VISMGYSPTLDFKTDTEKLSPRRAHDRWEDVTNLDTPELERLEDSRRNELYLDAAEGNQGEDNPPIPGGPLDDAQHLASTPRDEWGPDERAEAEEALNFLSRTMPQFEQSEGEALIEDESPKIHKDELSIMRWGVDPKPGDDFL*
Ga0102936_1067713	Ga0102936_10677131	F085171	TAATRTTPKELISTENILPIMSEARKRTHTDLDGLIDLDSRSLIKLGNSAVVSIPSADDLGIIGNIDDLDAAVSVRCVEPHQIVIEARVDLSNVDLEDIDLGVD*
Ga0102936_1071612	Ga0102936_10716121	F032166	AQPGDEPLEDAIELLETPADEWRDLDDGFNEVEEAEELLDFQRRTQGQIEAQGLGENYLTDARDMTKREAASIRWAIDPDTEREWL*
Ga0102936_1072045	Ga0102936_10720453	F079661	MSNTTIQIPESVRDELKDERLPHESNYGDTIERLLGDSTGGQLWTEQEIRDMAQQEIESVRR*
Ga0102936_1078745	Ga0102936_10787452	F066493	MSEREWHDGVVDVADELVQQHSATGAIDRLQKRRQTASDKLQARCTEAIAYIRREVMDDQS*
Ga0102936_1081236	Ga0102936_10812362	F079661	MTKTTIELPESTRDKLKAERKPHESNYGETIERLLGDTSGGSLWTEQEIRDMIEREIEQHARH*
Ga0102936_1083158	Ga0102936_10831581	F066493	MSQSREWTDGVIDVADELVQEHSAEGAIERLERRKESTRSDDLEARCREAIDWIESEVQGDD*
Ga0102936_1083159	Ga0102936_10831592	F038111	MIHRVPVVKRPEYTIWLENYKGIANFIHADVYKYNKTVREDFGKDLDKLMDLHVDPLYVLTETDNKKLKKFMSIYGLELDHRPDCDDGVAREVFRLTRRQ*
Ga0102936_1083790	Ga0102936_10837901	F066493	MSQSREWTDGVIDVADELVQEHSAEGAIERLQRRKESTRSDDLEARCNEAIDWIEAQVIDE*
Ga0102936_1085742	Ga0102936_10857421	F038111	MIPSRVPVVNKNNYTIWLENYKNIANFIHAEVYKYNKTTREEFGKDLDKLMDLHQNSLYVLTESDNKKLKKFMNIYGLRLDHKPLCDDGIEREVYR
Ga0102936_1091257	Ga0102936_10912572	F076468	MTNLEEIDTKAVWLSGRYWRRESKVVHIDGDCDQLDSCDNPRGPVDPDVLQPDMSVCKRCDPTEPDQYGGSGTSLAHRLRHGDLQDATIDSDSVGGNE*
Ga0102936_1093219	Ga0102936_10932192	F016383	MQTKFDYYYNDVPGHGKCRNNLVYTSLISHDKKTFCQWYYNDKVYHSSQNKVIDPDLMQEKWNREVYFLSEMNNNYPEHLPQILD
Ga0102936_1099115	Ga0102936_10991151	F032166	PGDEPLEDAIRLLETPADEYRDLDDGFNEVEEAEELLDFQRRTQGQIESQGLGENYLTDAKDMTKREAASIRWGIDPDADREWL*
Ga0102936_1105027	Ga0102936_11050273	F088354	MTDTPRAELDVDRFETTTVNANGQIYVGRDLEGVKVHVAVEIVDEQPD*
Ga0102936_1107734	Ga0102936_11077343	F104555	MRDDNPDNMTAFERLDWILGSPFGGEDLAALPVSDDQTIRQAIRRSIDNNGIQATGEHWAAVLDTIGPVPQLYLDTVKVIFNQEVGATF*
Ga0102936_1110732	Ga0102936_11107322	F089940	MKIISAALIVLGFGIIAGAETHDWFPMFAAQIALGTTVLISGGLFATQINDEEEVE*
Ga0102936_1111017	Ga0102936_11110173	F062297	MSMDDLKHCPRRYVVLAERVEDGRVVEQSVTGQSRAEELFERWDEGEQLCNLRVKAISAPMDDVTRHFEHDWPPTNNSPVSSDGGSTESATKGWETR*
Ga0102936_1112701	Ga0102936_11127011	F041612	CTASPTTGGRGSPILSSRKRELLAADAVTAATVRNGVELQVRAGLRVRDGDGVVARASATDTAPLAVTQQIDPAAHGTVGGAGGVSIETG*
Ga0102936_1114078	Ga0102936_11140783	F066493	MSQSREWDDGLIDVADELVKEHSAEGAIERLQRRRQTSDDELQARCNEAIAWIRREVLDDE*
Ga0102936_1124584	Ga0102936_11245841	F026202	MKNVVSCDAASKATVLSMGSLELLLRASVLAVLDLNEMGGTTLPGEVLGASLSGLVSCG*
Ga0102936_1129358	Ga0102936_11293582	F090210	MIIERWAFAGAAREQLEEVAKDRPILYKLLGIKPKWGIDFSLDYVSQEICMEVMHVEQDFLTVEDALAAKQKLESIVDNTDWEAGARELIARKSEWYDLSSDDHSDYKAKFFGVHRAFDNKKVFV*
Ga0102936_1129528	Ga0102936_11295281	F061556	MQNAITYRLATKTKTGDVVQFGPRMSIAIAERKRKAMVALTSHPVYIVNTLAE*
Ga0102936_1130270	Ga0102936_11302703	F026202	MKNVVSCDAASKATVLSMGSLELLLRTSILAVLDLNEMGGTTLPIEFLGASLSGLVSCG*
Ga0102936_1137164	Ga0102936_11371641	F099972	LNLPQAAEYSKWSYERGVEHGRREMQAEMMKALEALSSEAKEDLKEKLNDL*
Ga0102936_1143650	Ga0102936_11436502	F089905	MRTVREIQQEIREAEEAQAETEFSSVGWDFLNAEIIGLHAELKRATYHWDRLKLCGMLGVDTYTP*
Ga0102936_1143761	Ga0102936_11437612	F094957	MKALTQYMDQINAHLAIFGEAPLDPYRDYAEVRRAVEVLGSPEILAKDGELTRAEVEARTNTWLDAITELDAIEQELTA*
Ga0102936_1145126	Ga0102936_11451261	F094957	VRQEGNTMKALTGYMAQINAHLEIFGEAPLDPYRDYAEVRRAVEVLGSPEILTKDGTLTRAEVEARTNTWLDAITELKAIEQELTA*
Ga0102936_1150666	Ga0102936_11506661	F008719	TFAWNNIPGANNLGVSVESFSDDALKRQQVAEHIQVKMSYDMKVVGADLGGFINSAIS*
Ga0102936_1150666	Ga0102936_11506662	F097996	MAINRDGMHPRYLGWQVDWPIFVKVPFTADGKYWKKSEHFNWAERNLEMKDVASLYAQGFVYHNTELNKANKVGDRLSEMNAEDLKSLVTQLNVIVKDRTSSNQEFNNKKCKQSKIEDKQRGLIRRFLNHNPWIAEDFYTIRDTIL
Ga0102936_1157196	Ga0102936_11571962	F018106	MAKKLSETESKQTLGVAGDNTHNGQIRADEFLPELRGKRAIKKYREM
Ga0102936_1158594	Ga0102936_11585942	F094957	MKALTQYMDQINAHLEIFGEAPLDPYRDYAEVRRAVEVLGSPEILTKDGTLTRAEVEQRTNTWLDAITELDAIEQELTA*
Ga0102936_1162269	Ga0102936_11622692	F041612	GVELQVRAGLRVRDGDGVVARASATDTAPLAVTQQIDPAAHGTVGGAGGVTIETG*
Ga0102936_1164233	Ga0102936_11642333	F088354	MTDTDTPRAQLDVDRFETATVNANGQIYLGRDLQGVKVHVAIEIVTDDDEQEDPE*
Ga0102936_1172026	Ga0102936_11720262	F062489	MGPDAIIIREDVRDGPTRRIVYHPLTTGGYERREQLWRLSIEGWHTTGTEIVEELAIDAPGGER*
Ga0102936_1181563	Ga0102936_11815632	F089905	MRTVKEIEQDIREAEEAQAETEFSSVGWDFLNAEITGLHAELKRATHHWDRLKLCGMMGVDTHPR*
Ga0102936_1198128	Ga0102936_11981282	F089905	MRTVKEIEQEIREAESAQAETEFSSTMWDSLNAEIIGLHAELKRATYHWDRLKLCGMMGVDTYGR*
Ga0102936_1209241	Ga0102936_12092411	F089905	EFSSTSWDSLNAEITGLHRELKRATYHWDRLKLCGMMGVDTYGR*
Ga0102936_1214255	Ga0102936_12142552	F089905	MRTVREIEQDIREAESAQAETEFSSTMWDSLNAEITGLHAELKR
Ga0102936_1217508	Ga0102936_12175081	F089940	FYIMKIISAALIVLGFGIIAGAETHDWFPMFATQIALGTTVLISGGLFATQINDDDEEEVE*
Ga0102936_1218310	Ga0102936_12183102	F104555	MREDNPEKMTTSERLDWILDSPFGGEDLAALPVSDDQTIRQAIRHSIDANGVQATGEHWAAVIDTIGPVPKLYLDTIEVIFNQEVSECF*
Ga0102936_1223892	Ga0102936_12238922	F089940	MKYAAAFFIVFGLGIVASAETQDWFPMFAAQVALGVVTLITGGLFAAQIDTEEDDT*
Ga0102936_1224236	Ga0102936_12242362	F089940	MKYVSAALIVLGLSIVLGAETHDWFPMFAAQIALGTVTVISGGLFATLIDTSEE*
Ga0102936_1225520	Ga0102936_12255201	F094957	MKALTQYMAQINAHLAIFGEAPLDPYRDYAEVRRAVEVLGSPEILAKDGTLTRAEVEQRTNTWLDAITE
Ga0102936_1237979	Ga0102936_12379791	F097996	MHPRYLGFQVDWPVFIKILFTADGKQWKKSEHFNWAERGIETKNAATLYAQGFIYHNTELAKANKVGDRLGEMSKDDLYSLVVQLNNIVKKQTTTTKEFNNKKCKQSKIEDKQRGLIRRFLNHNPWITEEYYEIRDHI
Ga0102936_1246328	Ga0102936_12463282	F038111	MVPSKVPVVNRNNYTIWLENYKNIATFIHADVYKYNKTIRQEFGEDLDLLADLHNSPLYVLTHKDNKKLKKFMSIYGLVLDHTPLCDDGIEREVYRLDRRQ*
Ga0102936_1248147	Ga0102936_12481472	F089940	MKYIAAFFIVLGLGIVLGAETHDWFPMFAAQIALGTVTLFSGFLFATQMDE*
Ga0102936_1251621	Ga0102936_12516211	F038111	MIPSKVPVVNKPDYTIWLDNYRNIATFIHADVYKYNKSVRQEFGEDLDKLLRLHNFPLYVLTDKNNTKLKKFMNIYGLVLDHTPLCDDGVEREVYRLDRRV*
Ga0102936_1255710	Ga0102936_12557101	F090210	HTAPVKYWYIDKEDAEKGLVLDHCMLLTRFAFAGAARSQLEEIAQQRPILYKLLGIKPKWGIDFSLDYISQEICMEVIHIEQDFDNLDNALEAKLRLENIIENTDWQAGAEELIERKSEWINLSSDDHSDYKAQFFGWHRAFDNRKVFST*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007616: Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_A_H2O_MG

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences