| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300007607 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0103597 | Gp0123881 | Ga0099779 |
| Sample Name | Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_D4L_HD (Metagenome Metatranscriptome) |
| Sequencing Status | Permanent Draft |
| Sequencing Center | DOE Joint Genome Institute (JGI) |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 93882372 |
| Sequencing Scaffolds | 5 |
| Novel Protein Genes | 5 |
| Associated Families | 5 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| Not Available | 3 |
| All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Atkinsviridae → Helacdivirus → Helacdivirus borborovicinum | 1 |
| All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria |
| Type | Engineered |
| Taxonomy | Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Austria: Klosterneuburg | |||||||
| Coordinates | Lat. (o) | 48.3 | Long. (o) | 16.2 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F002779 | Metagenome / Metatranscriptome | 530 | Y |
| F014988 | Metagenome / Metatranscriptome | 258 | Y |
| F025291 | Metagenome / Metatranscriptome | 202 | N |
| F070166 | Metatranscriptome | 123 | N |
| F071145 | Metagenome / Metatranscriptome | 122 | Y |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| Ga0099779_1018099 | Not Available | 712 | Open in IMG/M |
| Ga0099779_1248904 | All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Atkinsviridae → Helacdivirus → Helacdivirus borborovicinum | 2163 | Open in IMG/M |
| Ga0099779_1256390 | Not Available | 605 | Open in IMG/M |
| Ga0099779_1278683 | All Organisms → Viruses → unclassified bacterial viruses → environmental samples → uncultured marine phage | 1252 | Open in IMG/M |
| Ga0099779_1283317 | Not Available | 500 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| Ga0099779_1018099 | Ga0099779_10180991 | F070166 | MNLNNYIVQIHRRTKRITLQRFLVSKIAYGKDFSLIELAALFHNQLWLQVKCDTDVHFKEKFGSSLKEVAKILKECNFSRGLQPGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGVEINKLPPKSFIGKGYRDHGTAPSPEKDGSPSWQEVGSEFSNLEREDTENLLFLLKIIEGTSNVSIKEQIAGIKRTIEVSRAIARIDPNWRNTQLT |
| Ga0099779_1248904 | Ga0099779_12489041 | F014988 | YTIVVDTAPNINGKQYAVTVMGGTQVGVDANSVSKPFTLTFFRPAVLRVLPAVNPVTGVVKNIPVNSYKLITRKGAVPAVNQSIQVARITTVIEVPAGTDTYEPEDIKAMISAHFGAGYANASGIADTVITGVL* |
| Ga0099779_1256390 | Ga0099779_12563901 | F025291 | KQPNQRRKQITNGKNKHHMVNLQREINIFRESAWRVITYNYHLGDHSSTGLYTLNVGADQRYMSFQTLLSTDEFQNMSIVYNEFKIHKAVFTSLPTTNSNRLPYLYVDIEPSTSAGVNPNNVRVCADDSARIFAPKALTAQSCEWNLKGLGPNFGIWLDTGATIPGQFQIGNYIFGSIPMNLGWEVKFQLVVEFTNPK* |
| Ga0099779_1278683 | Ga0099779_12786831 | F002779 | KNMKNLKLELFNFKQSLDFDRSDIAYIVEGHMNACNDLSEKTIIFSLNEKLKSFTYDDDVNTLLEGLNDDMSKYQLLYELKNLYSVLNSKNQGELYRQPINVLLQTINLDTDEDRMSKVLNELAIYDWVPEIKLFVYNLTKSPEQRSNLLSGGKSEVVYTIVEQVEDGHLAYIKDSWFLLTDDSIEKTLLENHVKDDNRMKTLRSLQTAMQFATINESRIDFRISEYLTIGLSVNDSTIFINEDELSEDTSLENLFSSPIVPIVNRNFYPLLVEVSNNIDSFVELDVVKRVSNLISPTLEVFAFNYKKNTFIYRCDERYGNSFFKYESALELVNEVRNELNYDLTFFYDNKLSKEIVAKKQLEDKERQITLKLEDVNFNISKLNGSVKVLGSTDVLTEALSNLEKRRDLLVDDLRAV |
| Ga0099779_1283317 | Ga0099779_12833171 | F071145 | MFLEEYMRKLSSIAGAALLAFTAFATPASAQSMSAGGSCGYSVGDYGFTDINSSKTMEAGESTVPALFYTVNYSGVPAPTIVGVIVRYNGELQSQIAVQVVTAENSGGSIDGALRAN |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |