| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300007587 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0103597 | Gp0123885 | Ga0099789 |
| Sample Name | Active sludge microbial communities from Klosterneuburg, Austria - Klosterneuburg WWTP active sludge MT KNB_D6R_HD (Metagenome Metatranscriptome) |
| Sequencing Status | Permanent Draft |
| Sequencing Center | DOE Joint Genome Institute (JGI) |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 36961630 |
| Sequencing Scaffolds | 4 |
| Novel Protein Genes | 4 |
| Associated Families | 4 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| Not Available | 2 |
| All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora | 1 |
| All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Atkinsviridae → Helacdivirus → Helacdivirus borborovicinum | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria |
| Type | Engineered |
| Taxonomy | Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge → Active Sludge And Wastewater Microbial Communities From Klosterneuburg, Austria |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Water (non-saline) |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Austria: Klosterneuburg | |||||||
| Coordinates | Lat. (o) | 48.3 | Long. (o) | 16.2 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F014988 | Metagenome / Metatranscriptome | 258 | Y |
| F045132 | Metagenome / Metatranscriptome | 153 | Y |
| F070166 | Metatranscriptome | 123 | N |
| F091427 | Metagenome / Metatranscriptome | 107 | Y |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| Ga0099789_1029650 | Not Available | 827 | Open in IMG/M |
| Ga0099789_1116670 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora | 1212 | Open in IMG/M |
| Ga0099789_1120782 | All Organisms → Viruses → Riboviria → Orthornavirae → Lenarviricota → Leviviricetes → Norzivirales → Atkinsviridae → Helacdivirus → Helacdivirus borborovicinum | 1964 | Open in IMG/M |
| Ga0099789_1122949 | Not Available | 1249 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| Ga0099789_1029650 | Ga0099789_10296501 | F045132 | VLMHSSNHYPLGNCDSPKPETSLDYLTRLGAVSHHSSSPSSLFAYTDSVRTLPEELVNPASAAKYISTRLQRGLVNQPDLAFPRSPGRILETAADQLLSTDRPSQL |
| Ga0099789_1116670 | Ga0099789_11166704 | F091427 | MLILGVYYAGISTTISIFNLLSTRRNLSIPGLRNRRILLPFITITVLLMLRALFVITPVLGSAMLMLEFDRH* |
| Ga0099789_1120782 | Ga0099789_11207823 | F014988 | PNINGKQYAVTVMGGTQVGVDANSVSKPFTLTFFRPAVLRVLPAVNPVTGVVKNIPVNSYKLITRKGAVPAVNQSIQVARITTVIEVPAGTDTYEPEDIKAMISAHFGAGYANASGIADTVITGVL* |
| Ga0099789_1122949 | Ga0099789_11229491 | F070166 | MNLDNYVVQIHKRTKRITLQRFLISKIAYGEDFSLIELAALFHNQLWLQTKCQVDPHFKVKFGMTLEVIASFLKECNFSRGLQPATISRMKAKALTLEGDFLIPKRNLPNLEAQLRNSISTKWRKPEGVEVSKLPPKQHVGKGYRDHGTAQKPEIDGSPSWQEVGSEFGNLERESTELILKLLKIIEGTSNDSITEQVKQIQRTVAVHEAIKRIHPNWRNTEIAEASEGKIRMKF* |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |