Sample 3300007334

3300007334: Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 Surf_A metaT (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300007334 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114292 \| Gp0119834 \| Ga0079269
Sample Name	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 Surf_A metaT (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	190805156
Sequencing Scaffolds	71
Novel Protein Genes	83
Associated Families	67

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	33
All Organisms → Viruses → Predicted Viral	8
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
All Organisms → cellular organisms → Eukaryota → Sar	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus str. MIT 9201	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp.	2
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Prymnesium → Prymnesium polylepis	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Fussvirus	1
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1
All Organisms → cellular organisms → Eukaryota	6
All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	1
All Organisms → Viruses → unclassified viruses → Virus sp.	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Synurophyceae → Synurales → Neotessellaceae → Neotessella → Neotessella volvocina	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Libanvirus → unclassified Libanvirus → Libanvirus sp.	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	3
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium TMED271	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Lipsvirus	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus subsp. pastoris → Prochlorococcus marinus subsp. pastoris str. CCMP1986	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Southern Atlantic ocean
Coordinates	Lat. (^o)	-28.2362	Long. (^o)	-38.4949	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000023	Metagenome / Metatranscriptome	5736	Y
F000613	Metagenome / Metatranscriptome	985	Y
F001219	Metagenome / Metatranscriptome	744	Y
F001608	Metatranscriptome	663	Y
F002192	Metagenome / Metatranscriptome	585	Y
F002883	Metagenome / Metatranscriptome	523	Y
F003068	Metagenome / Metatranscriptome	509	Y
F003081	Metagenome / Metatranscriptome	508	Y
F004544	Metagenome / Metatranscriptome	433	Y
F004869	Metagenome / Metatranscriptome	420	Y
F005533	Metagenome / Metatranscriptome	397	Y
F005911	Metagenome / Metatranscriptome	386	Y
F007722	Metagenome / Metatranscriptome	346	Y
F007756	Metagenome / Metatranscriptome	345	Y
F008624	Metagenome / Metatranscriptome	330	Y
F008697	Metagenome / Metatranscriptome	329	Y
F010164	Metagenome / Metatranscriptome	307	Y
F010476	Metagenome / Metatranscriptome	303	Y
F011083	Metagenome / Metatranscriptome	295	N
F012583	Metagenome / Metatranscriptome	279	Y
F013094	Metagenome / Metatranscriptome	274	Y
F013897	Metagenome / Metatranscriptome	267	Y
F022359	Metatranscriptome	214	Y
F023529	Metatranscriptome	209	Y
F025306	Metagenome / Metatranscriptome	202	N
F028201	Metagenome / Metatranscriptome	192	Y
F028518	Metatranscriptome	191	Y
F028529	Metagenome / Metatranscriptome	191	N
F029784	Metagenome / Metatranscriptome	187	N
F031926	Metagenome / Metatranscriptome	181	Y
F032308	Metagenome / Metatranscriptome	180	N
F033077	Metagenome / Metatranscriptome	178	Y
F033464	Metagenome / Metatranscriptome	177	Y
F033465	Metagenome / Metatranscriptome	177	Y
F034581	Metagenome / Metatranscriptome	174	Y
F034958	Metagenome / Metatranscriptome	173	Y
F035327	Metagenome / Metatranscriptome	172	N
F036277	Metagenome / Metatranscriptome	170	Y
F037240	Metagenome / Metatranscriptome	168	Y
F038555	Metagenome / Metatranscriptome	165	Y
F040682	Metagenome / Metatranscriptome	161	Y
F041824	Metagenome / Metatranscriptome	159	N
F042354	Metagenome / Metatranscriptome	158	Y
F043449	Metagenome / Metatranscriptome	156	N
F046424	Metagenome / Metatranscriptome	151	N
F047079	Metagenome / Metatranscriptome	150	Y
F047729	Metagenome / Metatranscriptome	149	Y
F049702	Metagenome / Metatranscriptome	146	Y
F050665	Metagenome / Metatranscriptome	145	N
F053816	Metagenome / Metatranscriptome	140	Y
F054104	Metagenome / Metatranscriptome	140	Y
F056635	Metatranscriptome	137	N
F057664	Metagenome / Metatranscriptome	136	N
F059056	Metagenome / Metatranscriptome	134	Y
F060971	Metagenome / Metatranscriptome	132	Y
F068862	Metatranscriptome	124	N
F071278	Metagenome / Metatranscriptome	122	N
F082819	Metagenome / Metatranscriptome	113	Y
F084269	Metagenome / Metatranscriptome	112	N
F084330	Metagenome / Metatranscriptome	112	Y
F089917	Metatranscriptome	108	N
F090441	Metatranscriptome	108	N
F090442	Metagenome / Metatranscriptome	108	Y
F092181	Metagenome / Metatranscriptome	107	Y
F092219	Metagenome / Metatranscriptome	107	N
F099360	Metagenome / Metatranscriptome	103	N
F104516	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0079269_1012576	Not Available	963	Open in IMG/M
Ga0079269_1013125	Not Available	831	Open in IMG/M
Ga0079269_1022460	All Organisms → Viruses → Predicted Viral	2278	Open in IMG/M
Ga0079269_1023241	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
Ga0079269_1025409	Not Available	570	Open in IMG/M
Ga0079269_1030405	All Organisms → Viruses → Predicted Viral	1029	Open in IMG/M
Ga0079269_1038626	All Organisms → Viruses → Predicted Viral	1054	Open in IMG/M
Ga0079269_1040779	Not Available	1093	Open in IMG/M
Ga0079269_1046299	All Organisms → Viruses → Predicted Viral	1120	Open in IMG/M
Ga0079269_1052308	Not Available	873	Open in IMG/M
Ga0079269_1053594	Not Available	523	Open in IMG/M
Ga0079269_1061508	Not Available	791	Open in IMG/M
Ga0079269_1064609	Not Available	1688	Open in IMG/M
Ga0079269_1070343	Not Available	1793	Open in IMG/M
Ga0079269_1075812	Not Available	963	Open in IMG/M
Ga0079269_1082537	All Organisms → Viruses → Predicted Viral	1304	Open in IMG/M
Ga0079269_1085009	All Organisms → cellular organisms → Bacteria → Proteobacteria	754	Open in IMG/M
Ga0079269_1091405	Not Available	942	Open in IMG/M
Ga0079269_1099033	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	900	Open in IMG/M
Ga0079269_1120068	Not Available	728	Open in IMG/M
Ga0079269_1120487	Not Available	582	Open in IMG/M
Ga0079269_1125356	All Organisms → cellular organisms → Eukaryota → Sar	4569	Open in IMG/M
Ga0079269_1133367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus str. MIT 9201	513	Open in IMG/M
Ga0079269_1159749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp.	642	Open in IMG/M
Ga0079269_1195722	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Prymnesiales → Prymnesiaceae → Prymnesium → Prymnesium polylepis	534	Open in IMG/M
Ga0079269_1198819	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Autographiviridae → Fussvirus	577	Open in IMG/M
Ga0079269_1198916	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	554	Open in IMG/M
Ga0079269_1202243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	997	Open in IMG/M
Ga0079269_1205264	All Organisms → cellular organisms → Eukaryota	653	Open in IMG/M
Ga0079269_1228746	All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	614	Open in IMG/M
Ga0079269_1259909	Not Available	629	Open in IMG/M
Ga0079269_1267180	All Organisms → cellular organisms → Eukaryota	509	Open in IMG/M
Ga0079269_1272294	Not Available	523	Open in IMG/M
Ga0079269_1285948	All Organisms → cellular organisms → Eukaryota	538	Open in IMG/M
Ga0079269_1291322	Not Available	644	Open in IMG/M
Ga0079269_1301349	All Organisms → cellular organisms → Eukaryota	612	Open in IMG/M
Ga0079269_1303015	Not Available	593	Open in IMG/M
Ga0079269_1315178	Not Available	714	Open in IMG/M
Ga0079269_1319596	All Organisms → Viruses → unclassified viruses → Virus sp.	618	Open in IMG/M
Ga0079269_1352910	Not Available	548	Open in IMG/M
Ga0079269_1361446	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Synurophyceae → Synurales → Neotessellaceae → Neotessella → Neotessella volvocina	857	Open in IMG/M
Ga0079269_1368105	All Organisms → cellular organisms → Eukaryota	879	Open in IMG/M
Ga0079269_1370135	Not Available	570	Open in IMG/M
Ga0079269_1374733	Not Available	695	Open in IMG/M
Ga0079269_1387203	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Libanvirus → unclassified Libanvirus → Libanvirus sp.	873	Open in IMG/M
Ga0079269_1388263	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	539	Open in IMG/M
Ga0079269_1388972	Not Available	557	Open in IMG/M
Ga0079269_1409613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	683	Open in IMG/M
Ga0079269_1410021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → unclassified Rhodobacterales → Rhodobacterales bacterium TMED271	589	Open in IMG/M
Ga0079269_1415384	Not Available	803	Open in IMG/M
Ga0079269_1416997	Not Available	730	Open in IMG/M
Ga0079269_1421600	Not Available	535	Open in IMG/M
Ga0079269_1426310	All Organisms → cellular organisms → Eukaryota	1011	Open in IMG/M
Ga0079269_1426513	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → Lipsvirus	552	Open in IMG/M
Ga0079269_1430065	Not Available	987	Open in IMG/M
Ga0079269_1432083	All Organisms → Viruses → Predicted Viral	1171	Open in IMG/M
Ga0079269_1438558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → Prochlorococcus marinus → Prochlorococcus marinus subsp. pastoris → Prochlorococcus marinus subsp. pastoris str. CCMP1986	511	Open in IMG/M
Ga0079269_1445194	Not Available	551	Open in IMG/M
Ga0079269_1450431	All Organisms → Viruses → Predicted Viral	1540	Open in IMG/M
Ga0079269_1453422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus → unclassified Prochlorococcus → Prochlorococcus sp.	844	Open in IMG/M
Ga0079269_1455582	Not Available	635	Open in IMG/M
Ga0079269_1457467	Not Available	909	Open in IMG/M
Ga0079269_1460451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Prochlorococcus	983	Open in IMG/M
Ga0079269_1465931	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Stichotrichia → Urostylida → Pseudourostylidae → Pseudourostyla → Pseudourostyla cristata	650	Open in IMG/M
Ga0079269_1473098	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	680	Open in IMG/M
Ga0079269_1473412	Not Available	947	Open in IMG/M
Ga0079269_1474528	Not Available	1551	Open in IMG/M
Ga0079269_1474775	Not Available	1011	Open in IMG/M
Ga0079269_1475904	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	658	Open in IMG/M
Ga0079269_1477115	Not Available	608	Open in IMG/M
Ga0079269_1480541	All Organisms → Viruses → Predicted Viral	1776	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0079269_1012576	Ga0079269_10125761	F090441	KGEVWELATLSFPDSLALGALITRRVIVGCQFPDAASNRKNDCDTFRFHSGT*
Ga0079269_1013125	Ga0079269_10131253	F005533	MDYTHNETALLTLISNINNQFYYIGEENDQVAPIDVKKFTEHCVAFIDSLEIER*
Ga0079269_1013334	Ga0079269_10133341	F034581	HWTGSTSEYIVEIYNTNTVPSQSIPLDTPRFPAEMNITCRPGFNGSSWGPNFYRTSTTDGEWSGSMPLCLGVPLAALYEKEVFVKDGTLEVVPVKELTPVFVSGRGGAMPILEARDECGDDQLWCDLVAPSAGHMLVWETTKSYAQEVELHWTGSTSEYIVEIYNTNTVPSQSIPLDTPRFPAEMNITCRPGFNGSSW
Ga0079269_1022460	Ga0079269_10224607	F008624	PQAHRSTEELKTIVKALSKLRLLNTPEEDQRLFECEQELRKRKREQDFIDAHFQVITYN*
Ga0079269_1023241	Ga0079269_10232412	F043449	LNKSDKTANNVNKVSRDTKNFEILSRALYLPRINIIPETIRIPIDKSIAGKVEKKGILVKRTPETKLTAAIVKVPVIRLTIRNKGRYKEFLSLKPSNNDLPVD
Ga0079269_1025409	Ga0079269_10254092	F010476	NFKIMFDYKIIAYNKLGKVQETENLFCSPDEIYDVMYTMSEQFGYAEALDTMDTHMGEYGERPLSLGERRYF*
Ga0079269_1030405	Ga0079269_10304053	F004869	MSYDTEHYYALHTFLEDDELHKIWNIVEKAMNRHGFDVSNSELSMRLYDEELEENMEHDYMAEYLESLSEGKDYGSKVDALVDSMGVTENKVAQGHVRKDLDAL*
Ga0079269_1038626	Ga0079269_10386264	F005533	MSYTKNEVALETLISDINNQFYYIGEDDDKVAPIDVKKFTEHCVKFIDSLEVE*
Ga0079269_1040779	Ga0079269_10407791	F092181	SDSYHILRVPAAPDPIATAKREMQADVKSTLIGAINKPTIHVNKTRDITLGFIKLKNELRSSAKPSLEFLDFILSWLNLLYFR*
Ga0079269_1046299	Ga0079269_10462993	F005533	MDYTHNEQQLLTLISNINNQFYYIGEEDDKVAPIDVKKFTEYCVAFIDSLEIEQ*
Ga0079269_1052308	Ga0079269_10523084	F034958	MKSEIDQMIDNLKFCIETIGLNDEQTGEVLAATNELGVNVEYFANEFMETSSRQVHEDDYLNIALFNAMYWEF*
Ga0079269_1053594	Ga0079269_10535941	F084269	NKKQRENSLIVMRAISRIKKYEMNENSSYGLYNPLLKEQTN*
Ga0079269_1061508	Ga0079269_10615081	F090441	TLSFLDSLALGALITRRAIVGCQFPDAVSYRKNDCDTFRSHSGT*
Ga0079269_1064609	Ga0079269_10646091	F005911	MSLKIKLLTLLNSKKGSALLLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSIKGKIDGADINQARLGGSTEAELEAPIDDLFHNAQFVTLKEMVKKAVIIVSDDPTATTRVGTDTGYDLENSGVLIKFADVDGTVIEDGTGGDTLVADVHLFVNLAGTADATTNAPYTAGEPFYYILMDDVTAGFNDASKRTIDLTQFPTGILATNDGGPQAEVSVVLPQDSEE*
Ga0079269_1064609	Ga0079269_10646092	F005911	KGGRKTMSLKTRLLTMLNSKKGSALLLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSIKGKIDGADINQARLGSGTEADIESPVSELFHNGNFITLKEMVKKAVIIVSDDPTATARSGVDTAYDIDNSGVLIKFADADGTVIADGTGGDTIVADVHLFVNLAGTADANTNAPYTAGEPFYYILMDDVTAGFNDATKRTIDLTQFPTGILATNDGGPQAEVSVVLPQDTEE*
Ga0079269_1070343	Ga0079269_10703431	F090442	AIVFQLEYESGKSGIRRGIPANPKKCIGKKHTLTPTNVDQK*
Ga0079269_1075812	Ga0079269_10758122	F071278	MSLKKRLQFLLKSTKGNALLLATAGAIAATFSVYFFVSISTLSDDSKQRVTHLYNAYQMALSVKGKINGDSMQANKLDGTNVEDDIEDSLDPLFHNGSFITLREMVIASIIIVQNDPTTTSERGKKIPYDVDNSGVLIKFANSTDAVIAPSDTNRAIEDRANLAKVHDLHLFVNLAGTTDIDSRPNGPYAVGDPFFYVVMASDSDTGRTDGLTDALKTVNLTQFPTGMLATNQGGPQAETSVILPQDFD*
Ga0079269_1082537	Ga0079269_10825375	F028529	MRLSKFLTEDLETKTVNLTLTFDERSELLKHLEMFDEHIDQLHPLVESVQDKLLGID*
Ga0079269_1085009	Ga0079269_10850091	F092219	TYYFLTPIWSTTMKKFITALAATFATVVIGSAASAATPTFNVYHEEVLPALVETNAPATFSVYHEEVLPALVAANTPPTFNVVREEILPAMNRAVASMPVTFAEVYGDIVYHEEVVPVADADPFSEHVVGGLGPQLPYDPMRGVDYGFVQALLQQNADPFAEEIVGGLGPQGEIDPFAEEIVGGLGPQPFNAITYSEVFVGGQLHIIPATDVETFSVAGN*
Ga0079269_1091405	Ga0079269_10914051	F090441	TLSFLDSLALGALITRRVIVGCQFPDAASCRKNDCDMFRSRSGT*
Ga0079269_1099033	Ga0079269_10990334	F029784	YKCFANANKSQGTYYTCCDLDTREIRYVTYIYDGYFMGYYLVQSATKVAENFANCQEKIFLSSASNKWPYYKGNDNEYTIDRQYPMQYDIPSLDEVEYSYLDSLLTAGTSK*
Ga0079269_1120068	Ga0079269_11200681	F056635	MKFALLALTIAVASATKCSHTTCKMVDVDSLFPGHLGSGYKVMQITHSNEETVCHKHSNAHDNHGDAAFAWQETGNKLHCKIIDSNPIKQGEQCECHKLGSNGDLPSPQGVNHDLTVPKTTGTATYTENQANNGLDQKSKATRIAERNTHVSN*
Ga0079269_1120487	Ga0079269_11204871	F056635	MKFALLALTIAVASATKCSHTTCEMVNVDSLFQGHLGSGYKVMRITHSNEETVCHKHSNSHDNQGDAAFAWQETGNKLHCKIIDSNPIKQGTQCECHKLGTNGALPTEQGVAHDLQHIAKKTGTNTYVENSANNVLDTKSKAERIAQRNTHV*
Ga0079269_1125356	Ga0079269_11253563	F001219	MIFPTTIFINKLFDFDLTFVIELGFFITLAIIVTFKFINPISKEIDDRAEFINYNLRKSTILLTFGYEKLSDCISLLTQEINELNRQTKLTRNYCNSNFENEISSIQKENLKILSELKGDLSIKSAFLFSNISGDLNSLTDKFFEKKFQSAP*
Ga0079269_1133367	Ga0079269_11333672	F036277	LCSNPFVDKTTQYELLPPNKSKIGLIYLGSASLNN*
Ga0079269_1159749	Ga0079269_11597491	F032308	MIYSGDVSMKEGATLTVWLPIGAINNSDDLNLEINLVDVTRVEPINSPILS*
Ga0079269_1161375	Ga0079269_11613751	F023529	MDEAAYVSRDEPDRVWFVDTTAGSAQPSYKPVADADTTHPRAISGGDTIFVGDQRCDVVSSDAEATIGLAARASSMEKYLSGSVVCAQALSENAHSTADAIVTHDPIEVLLGGATQSCSATDRPVLRFINDHGTQAASQFCADSSACADVLAYNGANRLVRWASGETIAEESANEPMDSGDVAPNDRVSLRMADLHTYETRTVDFVSFGGADGNNFFTVSQPFSAAHRQKRIHLNYKGTTSSAACSGRGLCDGSAAECQCFKGYTGQACQIQNALAA*
Ga0079269_1195722	Ga0079269_11957221	F028518	GYHMLMDVCFMIGVVVNDIAHLMMPSFLVAMLVVVYSQFLIGDLPGAAPAVAFALVFAYLARGAPAREPMKWNLATIFYSLQGLILVAVGIAMLSGDDSIIPEQLKPLDSPKVKFIGTTELTLSAYLFGSILAGHAQAMQPFCALFMLVALALHVAIGDWEGCPLIVVLATAHLCLG
Ga0079269_1198819	Ga0079269_11988192	F031926	ISSIQFDFAFNDAIKKASKSVSGEATTFQNGIPNQTVLVFKTICCLPDEIHTRIISEWTRKLFGVAVSTTSTVRNLHKLDSYGLIDIVDNPHGKSHKFTWIKLTAQGRKLQKLFVGSSSDWKDKPRPIIERNLKSAMAGGNE*
Ga0079269_1198916	Ga0079269_11989161	F008697	MKLTNKIKTPQVKPLPGMTPLGIKTSNAKPKSKPTTNNKAVVKSVELLVKDDELTYDDIWQFVQTKAGGNEANVKIVPLDNVDLKSESPVPFGYGGKAGGVRQKIQDWMLRGVDGDTTLKTVLNKAAPLGHSRKKPVCLHALLHGGYSPSSKYWMTPFVKLVVQAQT*
Ga0079269_1202243	Ga0079269_12022432	F099360	VLVEGSVIAFGAVLGLFWGLEQATAWVLGGLILLGALTTQRACSERKPDRVGQSVIAKWLVIALGFSAVFSGWNAVPLALLILGALAVNLASPISAVIVATNRRRY*
Ga0079269_1205264	Ga0079269_12052641	F050665	MTPSSPGGYFNDALGDNGYYVFSLYDLDPTPQFPYHGGDAGFMYNTVEEFKGKMALEMESIPPAIKRNDGKMQKFTLALPIGASCHEYEQYVPMKGNGCGGACEPKTNNATMVDYVRGWFDVLTSAETKSKYGDLFCVNKDKDSAFLGLSLWSYSYQMTYPPMKWFNNEFLPGTPPADAMQLLSSRLAELAC*
Ga0079269_1228746	Ga0079269_12287461	F007722	LLNSVKGLDWDTVATLTGDIGTIKKSIQTLNNRINGLNSPKLNDELLRYAIKQQDNVTDIKKNLGG*
Ga0079269_1259909	Ga0079269_12599092	F046424	MANTNVAKKAEAKLPALSLDMMESDAHSGLENIQQDDLATPR*
Ga0079269_1267180	Ga0079269_12671801	F089917	NMALTMFNMHNSLFPSEAGFGGFQEFRRMDRLMEQMDRQRAEFLQDMDTEPAAPEQGKPFAQSYSFSSFTSNTNGEVVTHRSENFQSSAGEKLSRSRRAIGQGESAKAIEETMKGEEQTRTLHNMEEQDLEAFNQQHAARLHWQPFHALEPRAEQPKHALHAALEQDID
Ga0079269_1272294	Ga0079269_12722943	F059056	MTGIELFIVIGGCYAIYTCGMAIATTIDYYSTEKEAKLVKL
Ga0079269_1285948	Ga0079269_12859481	F004544	MARLLHLFLVGAVAVSPVQKVIQLLDELKGKVESDLANEEKLMEEYTTWCDEEANTKEDAITSSKRTIGDLEATIEDAKASIVTLTSSIDELTTSISTSEAELDKATKLRNKENDDFMASEKELVDTVDSLERAITVLKKNLGFLQNGRVSEALGASLSG
Ga0079269_1291322	Ga0079269_12913221	F047079	SPLEQFSINKFIPIFIGNFDFSITNSTVLVFLSTTLAFLFFNFAVANAKLVPSS*
Ga0079269_1301349	Ga0079269_13013491	F001608	KDFKDSATAVAKAMEVLNDYYASASFLQVRSTTRRMSAKQPEFGGAKSDVGSTIVSILEVAESDFTTMLAEAEADESSAAEAYEKLTQENAITKTTKQGDVKGKTSEGKQLEVALGNYAENKATTTDELDAVLMYLDKLKPQCESKVMSYAERKAKREQEIEGLKEALTILSSEALIQVKSSLRGIRRA*
Ga0079269_1303015	Ga0079269_13030151	F042354	ALVLILLALLLSATTAFSQASVSAGLSYGSFSYDISGTKYTGDGGVLSLDGQFSPSIMYSIGLSDGKLDDQVLSNGEGSITYNVYPNIGIHFMGSQTKLATVQETDTSLGFSYNINTPTLGINVFAGSDINNYGKFYTYGTNIDLGVAKGTSLILSYKTEDRKQKATTMDARFIYDLTSNIGLNLGYKSTETKNAAG
Ga0079269_1315178	Ga0079269_13151781	F022359	YACTTAVVCSVFTIKHPDGKELTPPLSPTMQCVLNLVFQYFLIYLLLWIFITVEDLTSGQINLHAAKDAIESAKSTVQFAPMLCILFVATRMRALQMTQNRGAPQGWVQDGMYLASWSVLIQFMMCLLMPVFTGKKYTPDSLDGETKPKEDENLSNPWAAGAVTAIRYIALLSLLGGTATVITGVILMTPETANGRGALPVIADGTLGVDLAPQPPGINDVPGAKGAMKGVGKTVGG
Ga0079269_1319596	Ga0079269_13195961	F002192	IALFALFLGFYANGRVAKIIAGTKDLDWDAVANMTGDLATTKKTIQTLNNRINGMHSPKIAEQELMMQLLQQQQNKPNGKMMGG*
Ga0079269_1346107	Ga0079269_13461071	F038555	VHDDESVDSDYDYDDFDFQGLGVELLAGELELAKVYGQEDPPAAEDELEWECRYFILYDKGKICHFDALEDGLPVGDRGIIELKRIKTVEKVLALPTFVMKGDNKVYLFRLPNPDEVMMRTWIAAISQELKGK*
Ga0079269_1352910	Ga0079269_13529101	F037240	MASVKGANITNIDATPIVKVSSEVFGGKMRVQHDTFEASSLASGSDITIARVPKN
Ga0079269_1361446	Ga0079269_13614462	F010164	LAEKGFTQSLFWLQSWKNLYEKDKVEIVETKYKLVKTGLTNTFSTTENLIKNFENKAFVALQRYMVLITASRILRKFLFLSEAEQSKLIDATISKLGGFKK*
Ga0079269_1368105	Ga0079269_13681051	F053816	TTDAPPQAQQIAMPITFEFYHGTSMANARNIMDNGFQASSGGYLGKGVYGAYEDKARDFASLGGRHKGDEGALIKCRVTVDENKVKTRTHATNSTQLNGQTADCVWYPGGGSVKRPEVCITDPSKIEILGMERVANR*
Ga0079269_1369345	Ga0079269_13693451	F104516	MKPNMIKKWSIALLVAAGAAGLTGCEGMRVDEGASSATNNGNINVAPNGATLKANLSGTVVDDFGKAMTGVSVYAYGKTTTTDAGGNWVMNDVPVTGVNVNSTPQNLEQTTDVTTSGSIYITYSKEGYAEYRSKINNPAVITHYGTAGGNPNSIVVDNLVASEAVQLPELVNTVTGMVIDKGSYYTAPIGEYDMASGLTVRLVPAVDVVNNAYGSAAQTGAGTTECYEGCGFYSIEEMVATTDSTGTFTFTKVPKIPGGYIMRVDQPGYRPMARPNDGTGFSYDYDDSYEAGLTT
Ga0079269_1370135	Ga0079269_13701351	F005911	ATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSIKGKIDGADINQARLGSSTEADIESPVSELFHNGNFITLKEMVKKAVIIVSDDPTATSRSGVDTAYDENNSGVLIKFADADGTVIADGTGGDTIVADVHLFVNLAGTADANTNTPYTAGEPFYYILMDNVTAGLDASAITIDLTQFPAGILATND
Ga0079269_1372217	Ga0079269_13722171	F000023	MRSLEGTVRDIERKMGDADGGDMGKFRQSGAQTDAQVLKKVSTRLQDFEAQITAQLSNMQSDFDKKLSHLNRGSSGVKGMDTTTSVAGIETVVEDLDALKYDVGELKDLLNNNKGEINHVRRIVLACERDMEDFTAAMDAVNVDLDEMRARVDATHSIITSRQRVEATMTAEISTMRLDIGDIQEALKNHDSWMEDVSNTLQQMQEKEENLTEDLINLKNEMNAKLDTKVDNVAWKEAND
Ga0079269_1374733	Ga0079269_13747331	F011083	DDPLTTVKSSMMKQVVQVGHTDNSAFSTDARTREEFLMVYHDPYGGVWRTDGIVASTSDIIAASRVQDALRALPNEVLEGVSVKARTSSTVSLCTRFYDGVQHLGGYSETTDGAFKNSKMTTNFCETTYQLATATNKMDFTIEFADKPGQTGVQYLMEVDINKRGAGSFPVSGGITGGAYSVAEMNFNTNLGNLSELAECSDRGLDDGDGACECFDGFRGLACEEQEALV*
Ga0079269_1387203	Ga0079269_13872031	F012583	MNPVKIDVFDRYIMRGGDQSLQNIEDLCDFGFNMLQQPFEPELFDDVVIDVIRKLTKDLDK*
Ga0079269_1388263	Ga0079269_13882633	F049702	MTLIDFNKKELHDIYSALSYTRLETGFENESEAKLYDRLTKLMDKVAKLRQV
Ga0079269_1388972	Ga0079269_13889721	F003068	VTAGVAHNSAVYGASAKETNRNESNVVKTVDKESGVFTESHQSYFMELNAGEFISLGFEHTPDSITTPENQRITNTNATTKVKVDFNDLNTAYVKLNVPGGLYVKAGVVETDLDIKESMASGSTYNNVSTEGTLLGVGYSRDLGDSPFSIRVEGSYMELDDVTTSNGVSATGGSIANGGRNQIDA
Ga0079269_1394387	Ga0079269_13943873	F054104	DKVEIVETKYKLVKTGLTNTFSTTENLIKNFENKAFVSLQRYMILITASRILRKFLFLSEDEQSKLIDVTISKLGGFKK*
Ga0079269_1402655	Ga0079269_14026551	F034581	EVELHWTGSTSEYIVEIYNTNTVPSQSIPLDMPRHPSEMNITCRPGFNTSSWGPNFYRTSTTDGEWSGSMPLCLGMPMTLVYETSVMVRDGSLQVTSTVELTPEFVTGRGAAMPILEDRDECGDDQLWCDLIAPSAGHMLVWETTKSYAQEVELHWTGSTSEYIVEIYNTNTVPSQSIPLDLPRHPSEMNITCRPGFNTSSW
Ga0079269_1409613	Ga0079269_14096132	F025306	MPKAIKFTEAELETIERAMDDYMCYHDPNTPASDLIGGLPVAERVNDIMVKITEAYANL*
Ga0079269_1410021	Ga0079269_14100212	F084330	MASRLVSVSKNIFGKAFYSNLWIAISFGLISQVIGYTKYEGYFDLYWIIMKDGYLYFNLYPSFDELSAILFIRVFLAVFVFLTVKDKLKGN*
Ga0079269_1415384	Ga0079269_14153841	F042354	MFKYNFNIYEIENSEIIMKKLYPLAILVSLIISVTTAFSQASVNSGLSYGSFNYDISGTKYTGDGGVLSLDGQLSPSLSYSLSMSDGKFDDVVFSDSQGSITYNVYPNIGIHFMGSQIRLSTVQETDTSLGVSYNINTSSLGLKVFVGSDINNYGKFYTYGTKINLGVAQGSSLILGYKTEDRKQKVTTMDVSFVYDLTSSLGLNLGYKSTETKNAAGTAVVLKGNTTYAGIIYRF*
Ga0079269_1416997	Ga0079269_14169971	F003068	NIRITTMRKILTIISMVTLVSFPVKAVDFDFGSVSVTGGVALNSAVYGGSAKETNRDESNVIRTVNKESAVFTEDHQSVFGELNLGEFVSLGFEHTPDSITTPENRRTTQAEGNSTAGTTTVSVDFNDLNVAYLKFNLPGGMYLKYGYVDVNLDIKESMASGSTYANVGTEGTLAGIGYSRPLGDAGLALRVEGSYMSLDDVTTSNGVSASGATVANGGRNQIDASNLEGLNGKIALTYTFGG
Ga0079269_1421600	Ga0079269_14216001	F007756	MSQINTLKRFYINVKFEKYGTYTIEATSKEHALEIYNDGDYGWSDYSEDFGEFNEVVEDVEEEVFADTQLSLAGVL*
Ga0079269_1421913	Ga0079269_14219131	F034581	MLVWETTKSYTQEVELHWTGSTSEYIVEIYNTNTVPSQSIPLDMPRFPAEMNVTCRPGYNTSSWGPNYYRTSTTDGEWSGSMPLCLGMPMAALYETSVFVKDGSLEVTSVTELTPGFVSGRGAAMPILEDRDECGDDQLWCDLVAPSAGHMLVWETTKSYTQEV
Ga0079269_1422983	Ga0079269_14229831	F000613	MPLVKKRLSVAAGATSDQVLAGTTYEYVDPGTRIVVAAAVDTVGTATADTTMDFTVNNAEFSKNASVSAIVTGEPFGWNGNYVMNDMVTTGQVRNRPVITFTNGTSATRTIDVAVFIGG*
Ga0079269_1426310	Ga0079269_14263101	F068862	TLGINFFFKAMLYKLFIALATLLVVNANAPSERSVHISTNTDVDGLNGLNLNWQVPFKVDDYTVGFRYKLNELKKYPETLFAKKTFDVADGEATVDADVNVDDKSLSANLKWVSDKLVDGMKTTFRLNGNSNDKLTSVGAEVSKNVDGHDVELKGHYDLADSRLDANGKVVIDKTTAEVSYNSGDEDIRVQLSHDLDENNSPKGSYSTKTGHVAYGWTRKWEGGELDGTYHPDNGGRAVLEWTDKGNQGDWKTRAEVPLANNEIGNSKVTIKREWKY*
Ga0079269_1426513	Ga0079269_14265132	F013094	VVVAIPTSLVMMKLLNSSLFINNSELLDMNQKISVIIHQLDDFREERREEREKFLNVSDDTKQVLSD*
Ga0079269_1430065	Ga0079269_14300652	F033465	MEFILFTTLFLCIIAMIGENSNPRGMNIFWYKVNVVRKQYFKALTEYDSGNNKGNGKHSR
Ga0079269_1432083	Ga0079269_14320831	F047729	MSTSELNKLKNAQYHLKKLEAHIKDNKWYSHLYSHLAAVEGELQRQVAILENTPQAKTEDIEDTEKLYNVLEEQTNGFFPPDTSYTSLTRVVASQKFEDLLAAGVSPNSIKIVRVK*
Ga0079269_1432083	Ga0079269_14320835	F012583	MSLSEQVKIKVFDKYIMRGGDQSLQNIEDICDFGFNMCQLGYDTESFNDVVIDVICKLTEKLEDKS*
Ga0079269_1438558	Ga0079269_14385581	F041824	LQNRPIYHLIDRSTTQVIGRGLEHVQELHHGKHVF*
Ga0079269_1445194	Ga0079269_14451941	F060971	IPVYDWENFDELTPHHISHLMHVVQMCTLKRDAQNIDYYAGVFGNV*
Ga0079269_1450431	Ga0079269_14504315	F057664	MIFTETEQLAVDTFLELQEQVKAFGLHNFEREERLLFKRGRTLLEYAKKQASKKKTPYTDAETECLLNAYLLNRADMEKTRTVFFREFPNSKHSYSSVWQKISRIRTLDNLFPTDTEWETDLQVRTMCKEYNFYH
Ga0079269_1453422	Ga0079269_14534223	F032308	VIPSCFYIKDVSIKEGATLTVWVPTGAINNSDDLNFEIN
Ga0079269_1455582	Ga0079269_14555822	F033077	MTTPQPDNTTYKVLRLTTEGWTDLDPLMAVNLTKEQCDAVLQNCINDGIDYRELKAVKDN
Ga0079269_1457467	Ga0079269_14574671	F090441	GALITRRVIVGCQFPDAVLHRKNDCNVFRSHSET*
Ga0079269_1460451	Ga0079269_14604513	F032308	VIVIRSSFYRGDVSIKEGATLTVWVPIGAINNSDDLNLEINLVDVTRVEPINSPILS*
Ga0079269_1465931	Ga0079269_14659311	F003081	MFNDTRYGAEVYYMHVRGVDTLMVLSYVHILKKIFLKNYVTSESDG*
Ga0079269_1473098	Ga0079269_14730981	F082819	MSYTKNEAALETLISNVNSFFYYVGEDDDLIPFPRYEIRERLDKYVSQFMQSIEVEGDDD
Ga0079269_1473412	Ga0079269_14734121	F002883	MSTLHHEDMLLDIFEEVQEAFPYLDEEKQIEIANNRFQDLLQ*
Ga0079269_1474528	Ga0079269_14745282	F035327	LIKTDIQTSKVLAEGLKKIVKLEGVDEKKEPYEKTKKVTKGVVVALSSEAKQKVIKSL*
Ga0079269_1474775	Ga0079269_14747752	F028201	MIEYDSKQSKEIYNALLESKVDLLEYFLGPDPKKTSYYRKHVKRYRVKSILNDY*
Ga0079269_1475277	Ga0079269_14752771	F040682	KESNNEKIVAPIIRNLKPKLNIKAAIVQMKRNIPKNPKILGVFSNSSKKDI*
Ga0079269_1475904	Ga0079269_14759043	F033464	LLYLSLLASHDPTHWTIKCDGWRQLASEVRQDEYLDKQSKLDLINYFKTKVEEECDFEP*
Ga0079269_1477115	Ga0079269_14771151	F005911	TAGAIAATFSVYFFVSLTNLSEDSKQRVAHLYNAYQMGQSLKAKIDGADINQARLGGGDEDEIEAPIDDVFHNGVFITLKEMVKKAVIIVSDDPTATARKGYDIGYDLDNSGVLIKFAAADGNVIQPDQGDADDTIVSDVHLFVNLAGTADTDSNAPYVDGTPFYYILMDSTTAGLAASLETIDLSIYATGILATNGGGPQA
Ga0079269_1480541	Ga0079269_14805414	F013897	MSFTKDQLLALMNTIDFATDNDASYEEYTILQSGTSDLEPIRDILYNEYIHQT*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007334: Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 Surf_A metaT (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences