Sample 3300007228

3300007228: Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 8/11/14 A brown RNA (Eukaryote Community Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300007228 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114511 \| Gp0116025 \| Ga0075175
Sample Name	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 8/11/14 A brown RNA (Eukaryote Community Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	192131523
Sequencing Scaffolds	52
Novel Protein Genes	58
Associated Families	35

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
Not Available	30
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei	1
All Organisms → cellular organisms → Eukaryota	3
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Volvocaceae → Volvox → Volvox carteri	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	2
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	1
All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Vannellidae → Vannella → Vannella robusta	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	4
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Dictyochophyceae → Rhizochromulinales → Rhizochromulina → Rhizochromulina marina	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Monogononta → Pseudotrocha → Ploima → Brachionidae → Brachionus	1
All Organisms → cellular organisms → Eukaryota → Sar	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → unclassified Bacillariophycidae → Endosymbiont of Durinskia baltica	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Wastewater Effluent Complex Algal Communities From Wisconsin, To Seasonally Profile Nutrient Transformation And Carbon Sequestration
Type	Engineered
Taxonomy	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent → Wastewater Effluent Complex Algal Communities From Wisconsin, To Seasonally Profile Nutrient Transformation And Carbon Sequestration

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Milwaukee, Wisconsin, USA
Coordinates	Lat. (^o)	43.023	Long. (^o)	-87.895	Alt. (m)	N/A	Depth (m)	0
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000251	Metagenome / Metatranscriptome	1457	Y
F001488	Metagenome / Metatranscriptome	686	Y
F001602	Metagenome / Metatranscriptome	664	Y
F001758	Metagenome / Metatranscriptome	640	Y
F002212	Metagenome / Metatranscriptome	582	Y
F007408	Metagenome / Metatranscriptome	351	Y
F010383	Metagenome / Metatranscriptome	304	Y
F012678	Metagenome / Metatranscriptome	278	Y
F014836	Metagenome / Metatranscriptome	259	Y
F021307	Metagenome / Metatranscriptome	219	Y
F022205	Metatranscriptome	215	Y
F022887	Metagenome / Metatranscriptome	212	Y
F022892	Metagenome / Metatranscriptome	212	Y
F024806	Metagenome / Metatranscriptome	204	Y
F027186	Metagenome / Metatranscriptome	195	Y
F033437	Metagenome / Metatranscriptome	177	Y
F040485	Metagenome / Metatranscriptome	161	Y
F043395	Metagenome / Metatranscriptome	156	N
F044534	Metagenome / Metatranscriptome	154	Y
F051952	Metatranscriptome	143	N
F059886	Metagenome / Metatranscriptome	133	Y
F061006	Metagenome / Metatranscriptome	132	Y
F061786	Metagenome / Metatranscriptome	131	Y
F065812	Metagenome / Metatranscriptome	127	Y
F067805	Metagenome / Metatranscriptome	125	Y
F070166	Metatranscriptome	123	N
F073141	Metagenome / Metatranscriptome	120	Y
F085203	Metagenome / Metatranscriptome	111	Y
F087278	Metagenome / Metatranscriptome	110	Y
F091427	Metagenome / Metatranscriptome	107	Y
F096705	Metagenome / Metatranscriptome	104	Y
F098745	Metagenome / Metatranscriptome	103	Y
F100471	Metagenome / Metatranscriptome	102	Y
F101221	Metatranscriptome	102	N
F104572	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0075175_1001311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3251	Open in IMG/M
Ga0075175_1003019	Not Available	2111	Open in IMG/M
Ga0075175_1005918	Not Available	2164	Open in IMG/M
Ga0075175_1007763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Enterobacter → Enterobacter cloacae complex → Enterobacter hormaechei	555	Open in IMG/M
Ga0075175_1016785	All Organisms → cellular organisms → Eukaryota	710	Open in IMG/M
Ga0075175_1028228	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Volvocaceae → Volvox → Volvox carteri	562	Open in IMG/M
Ga0075175_1038528	Not Available	517	Open in IMG/M
Ga0075175_1044837	Not Available	639	Open in IMG/M
Ga0075175_1044865	Not Available	1260	Open in IMG/M
Ga0075175_1051922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	12590	Open in IMG/M
Ga0075175_1052542	Not Available	721	Open in IMG/M
Ga0075175_1053061	Not Available	1369	Open in IMG/M
Ga0075175_1054194	Not Available	766	Open in IMG/M
Ga0075175_1057320	Not Available	587	Open in IMG/M
Ga0075175_1063906	Not Available	625	Open in IMG/M
Ga0075175_1067399	Not Available	635	Open in IMG/M
Ga0075175_1072961	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	641	Open in IMG/M
Ga0075175_1089573	Not Available	641	Open in IMG/M
Ga0075175_1098152	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	3496	Open in IMG/M
Ga0075175_1130161	Not Available	710	Open in IMG/M
Ga0075175_1157248	All Organisms → cellular organisms → Eukaryota → Amoebozoa → Discosea → Flabellinia → Vannellidae → Vannella → Vannella robusta	548	Open in IMG/M
Ga0075175_1235285	Not Available	931	Open in IMG/M
Ga0075175_1244372	All Organisms → cellular organisms → Eukaryota	688	Open in IMG/M
Ga0075175_1251167	Not Available	510	Open in IMG/M
Ga0075175_1252524	Not Available	665	Open in IMG/M
Ga0075175_1297013	Not Available	695	Open in IMG/M
Ga0075175_1340561	Not Available	743	Open in IMG/M
Ga0075175_1366077	Not Available	736	Open in IMG/M
Ga0075175_1369081	All Organisms → cellular organisms → Eukaryota	859	Open in IMG/M
Ga0075175_1369591	Not Available	634	Open in IMG/M
Ga0075175_1380576	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1324	Open in IMG/M
Ga0075175_1389602	Not Available	606	Open in IMG/M
Ga0075175_1397247	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	759	Open in IMG/M
Ga0075175_1406477	Not Available	568	Open in IMG/M
Ga0075175_1411345	Not Available	523	Open in IMG/M
Ga0075175_1416222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1287	Open in IMG/M
Ga0075175_1416504	Not Available	591	Open in IMG/M
Ga0075175_1422990	Not Available	791	Open in IMG/M
Ga0075175_1423982	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Dictyochophyceae → Rhizochromulinales → Rhizochromulina → Rhizochromulina marina	506	Open in IMG/M
Ga0075175_1432324	Not Available	608	Open in IMG/M
Ga0075175_1434765	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	1481	Open in IMG/M
Ga0075175_1437409	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	661	Open in IMG/M
Ga0075175_1447784	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Postciliodesmatophora → Heterotrichea → Heterotrichida	712	Open in IMG/M
Ga0075175_1450124	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora	556	Open in IMG/M
Ga0075175_1452792	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Spiralia → Gnathifera → Rotifera → Eurotatoria → Monogononta → Pseudotrocha → Ploima → Brachionidae → Brachionus	550	Open in IMG/M
Ga0075175_1473530	All Organisms → cellular organisms → Eukaryota → Sar	2488	Open in IMG/M
Ga0075175_1477308	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Bacillariophyceae → Bacillariophycidae → unclassified Bacillariophycidae → Endosymbiont of Durinskia baltica	678	Open in IMG/M
Ga0075175_1483041	Not Available	667	Open in IMG/M
Ga0075175_1491443	Not Available	594	Open in IMG/M
Ga0075175_1493270	Not Available	609	Open in IMG/M
Ga0075175_1493275	Not Available	609	Open in IMG/M
Ga0075175_1493508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	1796	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0075175_1001311	Ga0075175_10013112	F091427	MLILGVYYAGISTTISLVNLLSTRRTLSIPGLRNRRILLPFVSITVLLMLRALAVITPVLGSAMLMLVLDRH*
Ga0075175_1003019	Ga0075175_10030192	F091427	MIILGVYYAGISTTISIVNLLVTRRTLAMPGLRSRRILLPFITITSLLMLRALSIITPILGSAMLMLLTDRH*
Ga0075175_1005918	Ga0075175_10059183	F024806	MPTNSNFNFTNQSVVTLELPFAEHVEELRQRIFLFIGIILFFTCVAFVEVKDLVKILELP
Ga0075175_1007763	Ga0075175_10077631	F044534	GIYHQFLWPESCPVSSHTNQELSGKARLETASSRVRPTGSFDPCADAVTPEGFGCYCADQNAVTGPGGPTPPEGLARRTSEARKGTATAGRERIWQNP*
Ga0075175_1007850	Ga0075175_10078501	F000251	MGAGGFGEVWVKTMSDPKSFKIIHNLDRAGCCWFPTLCFCAKGQKARSYLVISENFIHGNNSYPAGICCCLRDAPYTYYYDRQPFAENACERSLQSCLGGGDFVTEHDMCYCCYVIPMIGVYDALCRPCYGGYVGRTSSNRSKEVCFLIETRCC
Ga0075175_1016785	Ga0075175_10167851	F087278	IDRRTPEQKARDVENILNWKRNPKANDGPETEPFKKIDQLLPKKPGQTLEDRAKDIDNVLTWMRNGGVDEPKFGPNEPFRPTKNIDMPDKRSPIEKARDIENITNWVRNPKDNERPETEPFKKIDQLLPKKPGQSPEDRAKDIDSALTWVRNRGVDQPLFDSPSSFTPLSNLPIDRRTPEQKARDVENILNWKRNPKANDGPET*
Ga0075175_1028228	Ga0075175_10282281	F065812	MINRDLLLRLNIYRRPIAYKYCEGKMKRTLKRGLKDLKSLKRKR
Ga0075175_1035456	Ga0075175_10354561	F001758	SQVTGEKSGQAGWRDSSQAGAQVPGAEAEFTSSSGDVRASSVYAKKELGDEER*
Ga0075175_1038528	Ga0075175_10385281	F061006	PDNRSPTEKTRDLENITNWVRNPKDNERPETEPFKKIDQLLPKKPGQTPEDRAKDIDSALTWVRNRGVDQPSLEDLSPFEPMKSLPIDRRTPEQKARDVEDILNWKRNPKEHDSPETEPFKRIDQLLPEKPGQSPVGRANDIDNVLTWLRNGGIDAPTLGPNEPFRPTKMI
Ga0075175_1044837	Ga0075175_10448371	F087278	QKARDVENILNWKRNPKEHDSPETEPFKKIDQLLPEKPGQTPEDRANDIDNVLTWLRNGGIDEPKFGPNEPFRPKENIDMPDKRSPTEKARDIENITNWVRNPKENDRPETEPFKKIDQLLPKKPGQSPEDRAKDIDNALTWVRNRGVDQPLFESPSSFKPVNNLPIDRRTPEQKARDVENILNWKRNPKEHDSPETEPFKKIDQLLPEKPGQ
Ga0075175_1044865	Ga0075175_10448651	F070166	MNLDNYIVQIHRRTKRITLQRFLISKIAYGKDFSLIELAALFHNQLWLQEKCDTDVHFKEKFGRSLEEIAKILKECNFSRGLQPGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSITTRWRKQEGVEINKLPPKSFIGKGYRDHGTAPSPEKDGSPSWQEVGSEFSNLEREHTENLLFLLKVIDNEPNISIQEKLQGIRRALEIDTAIKRIDPNWRDTQIAEASKGRYADAKRIKQVKP*
Ga0075175_1051922	Ga0075175_105192223	F001488	MARLELTLNFPKHFHIKTFNVKSEPMLSPLAKSILQSVQFKHFYYVRDDIDYRLRSHPMERDFLLQALFSIAISLQNNLSINFFDMWIYEIYISKVSNPNKFLKESSQNKEFDEYITIKLAYGINTSQEKK*
Ga0075175_1052542	Ga0075175_10525421	F070166	MNLNNYIVQIHRRTKRITLQRFLVSKIAYGKDFSLIELAALFHNQLWLQVKCDTDVHFKEKFGSSLEEVAKILKECNFSRGLQPGTISRMKAKVLALEGDFLIPQRNLPNLEAQLRNSITTKWRKQEGVEINKLPPKSFIGKGYRDHGTAPSPEKDGSPSWQEVGSEFSNLEREHTENFLFLLKVIDNEPNISIKEKLQG
Ga0075175_1053061	Ga0075175_10530613	F051952	MPKFPRQTIAPDHFTTTALSENSWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGSEVFTFRAVFTSLEDVVSANPQDRLIRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKDMAYDGSPSWQEVAMADTNLGTSDTSKTDYLEFLFRNFNTNRVQLFPQKKPGEKLHSSSN*
Ga0075175_1054194	Ga0075175_10541941	F059886	VIYASRAASAILRGGRHQLSPTIPRSPGIIPAVLSVAPFRPLRFDC
Ga0075175_1054194	Ga0075175_10541942	F033437	LAFAGGVLPDATLRGMRMSRSHGGTVLTVAGRDLSSEASAPGSDAPCREHRAGRGADTPATNISRVGTLTTGTAPACDRPLAPRYGSDLLPLRLHFAFAAG*
Ga0075175_1057320	Ga0075175_10573202	F027186	MTTNSNFNFTKNSIITLELPFSEHIEELRQRIFLVFGI
Ga0075175_1063906	Ga0075175_10639062	F024806	MTTNSNFNFTKNSIITLELPFSEHIEELRQRIFLVFGIILLLTCFAFIEVKTLVKILEL
Ga0075175_1067399	Ga0075175_10673991	F051952	MPKNPRQTIAPDHFTSTALSENSWRILGKVTENEVTLVRYFLSKIVYTDEVVTLEETCILFLSFEKMVQKMSQHEAYRAKYGSDVFTFRAVLTSLEDVVSANPQERLIRMREVYGFYRGKLFSRRYYFSVRGQLTRELRLKVLTRFPKKFKPKAFVGKGYGDHGTAKEMAYDGSPSWQEVAMADTNLG
Ga0075175_1072961	Ga0075175_10729611	F087278	PFDKLNSLPIDRRTPEQKARDVEDILNWKRNPKEHDSPKTDSFKKIDQLLPEKPGQSPKERANDIDNTLTWLRNRGVDEPQFGPEEPFKKTKNLPMPDTRSPDQKAKDLDDIMNWIRNPKEHDSPKTEPFKKIDQLLPEKPGQSPEDRAKDIDNALTWVRNRGVDQPSMEPTSPFDKLNSLPIDRRTPEQKARDVEDILNWKRNPKEHDSPKT
Ga0075175_1089573	Ga0075175_10895731	F087278	LNSLPIDRRTPEQKARDVEDILNWKRNPKEHDSPKTEPFKKIDQLLPEKPGQSPEERANDIDNTLTWLRNRGVDEPQFGPEAPFKTTPNVPMPDNRSPDQKAKDLDDILNWVRNPKEHDSPKTEPFKKIDQLLPKKPGQSPEERAKDIDNALTWVRNRGVDQPSMEPTSPFNILNSLPIDRRTPEQKARDVEDILNWKRNPKEHDSPKTEPFK
Ga0075175_1098152	Ga0075175_10981521	F027186	MVSNLDFNFKNNATLTLELPFSEHIEELRQRISHIFWIILLLSFLAFF
Ga0075175_1130161	Ga0075175_11301611	F100471	THSPSFKKYIYHPDKDIDILKEDKMSKPGATPLPISGNEPGNRTRNPRNIPLNTSVPQDVGSVPAAATTVPEIKEDILNAFMTELYNVNNITNDELANIYEALRYKGFNRTEVIKQLAVVTKNTRLSTEIIIAVALQGPQRASRTKLTNGMTPIQMGIPASGGQGTKTLTLNKILSATADLAAFFLKRLNVPKRMLSDLPGWLQFPSAGSIKMPDNYRQLHIQFSKNFSELIGGFF
Ga0075175_1157248	Ga0075175_11572481	F061786	NNVKGLYLCETIWPSENRQSCIPPDKLEKAIKKGLVPARAISEEQNLDEDEDELIDSCIREVWDYYDPKKVGFLNKKQTQQFFKDALELVALRKQAKVKDLFQNRPQGACLDAAFKEVNTSGDGKVTFEQFEEFINNYDIDEAIAFLTGAGGEFQIPVDKVQMVDNSHLPAGGGGPQKGKIE
Ga0075175_1235285	Ga0075175_12352851	F007408	STVDAVKASADEITSKLRDAVRKPLDAIVEVICGTVFVHDYWVQWQIWWMARKITNFICEITTLDGFLESAQKLAAAVQKHVDEEGGKCIGKKEESDKFIEDASAALWKALADQSVGLWTKIYTLSENINNLFSDQSEEVTEPLLELLSHIFEVQVRGFNAIRIVYLTKLKESIGEAKDHDALKAASSEALRHAIFENINILAEEHWVKTHEALVEATKAYVRDRFLHDVWPSIKSGLDDLLSLLPEELKSLGLDVAGMVLKVALIIINKGVTWALTKIGMRMENAIFAQD*
Ga0075175_1244372	Ga0075175_12443721	F002212	MLKAAAAIALALGVQAADPVPLCLPKVHTVHVSTFRDVQHEERHRPPDEMKAGDEIQIFFDMGQQKSLVWIHDDGPQRGGRREPDHGQLTDYAKQLQWNWDYVNQTVQRCTLQVQTRPLAPICISNAYLNGTGTIGEDFPIDFYSANVTDPTRQVTEMVFTLMEKDSTSKPVKQDRRGRQVQPDRTVVEWFDRVSWYNMVETPIDPKVFAVPDACPA*
Ga0075175_1251167	Ga0075175_12511671	F061006	PRDIESPETEPFKRIDQMLPEKPGQSPKERANDIDNVLQWMRNRGVDQPEFKDEPFQTAKQMPLPDRRSPEQKAKDLDDILQWVRNPRDSDSPSTEAFKRIDQLLPEKPGQSPEDRAKDLDNALTWVRNRGVDRPEFEATPTFDKLNSLPFDRRTPEQKARDVDDILNW
Ga0075175_1252524	Ga0075175_12525241	F040485	HNMRLVLVFLAVVALAFAATPSTPVWPAAFAANILASDNQGNQRFFRWVYSSTLAKERIEGMVPWNDQQYYAEQIRDYASDNQYDIFYQQEYASCFTHPINGTVPHPNFSQFTYMGQALVQYDTVYHWGFYDKTNNFTMNYFDVQSTREPKRFDLSDLNRGWSETWVYMGFDDEPQDPSLFTVPSQLLPLCNAVTVPPKKF*
Ga0075175_1297013	Ga0075175_12970131	F014836	MRVFLLLALVAIIFGTVECSCPAVQGYCPQEKIYQGCHCFHEWNDANRVGNWTFPENWLQLYEPAWVSFVSIAGDNTVTVDVERRVNELYVGPNRWDTTRLVIDEDLTIVYDDVPVISAVRGYRLPNGVVRLVIQGKGFGFVSDDIQVTVHEYYEIDGDSNIEDREEFVYDCQYVTLTYRDAKIECNIAPTRPMPYTLTVQVAANGMITDHQFLSKYIE*
Ga0075175_1340561	Ga0075175_13405611	F073141	NSIHIQNMTSIDNKTNEDELLRNYVTELYNLNNITPEEIKLWNDTYSYKGFDRIKVMKDLMKKVPDIKTAQQIIMICGLSGPQRAALTKLINGKTIGSYGIPASGMKGSEGVSCQRITAATADLCAFLLKQANVPKRMNIPLPGWLQFPSAGSIKMPQELRQMHIDFAKRFSTVIGGQFNEQIYEQMAANSYLNENLNLFSNIEAYMQQPAQSNVLPVPAPTFNPARGDVNPPKTADSSKVKPAGRG
Ga0075175_1361727	Ga0075175_13617271	F085203	LEKIQRRTMKEAADRCIGFIFASPAVKAVIKRMDGILKRKPKQAFDKWRKFVQAVNNKEILDGVKSRELKAKLDKVARRTLRDATERILGDGSKVKGAIKKIFSALQRMPKVALEKWRKYLQGLKDKSFFDNLRSAKLLNCLSRIPTRRTRDAAQRILGGGNKIKGCLQNLINGLKNIPK
Ga0075175_1366077	Ga0075175_13660771	F073141	MSNTEVKSINNEDDQLRTYITDLYNLNNITSDEIKLWNEAYSYKGFDRTKVMKDLMKKVPDVKVAQQIIMICGLSGPKRAALTKLINGKTIGSYGIPASGLKGTDGVSCQRITAATADLCAFLLKQVNVPKRINLSCPGWLQFPSAGSIRLPQEIRAMHIEFAKRFSTVIKGEFNEQIYDQMAANSYLNENLNLFSENAVVLPSSISGVARSGPRVVSKP*
Ga0075175_1369081	Ga0075175_13690811	F010383	LTSGFGGATLSLKSAANLREYTPQRDEHLSAIAAATGKSSVEFSFKDIKGLDAELAKRGYENRMGEVFFSSYLQRLAESLTKLCSNEHAKTSLNQKWTSNKIFYEIDAKAPTYQNVDFPNGDLRVSNKTDYIWSNIDSLGEDIPDKLTSDILGTTLSLKSAQNIREYEEKAGVHLAAIGAAIGRAGPVTFVVEDVKNVDAQVNTRGYNNRIGEIIWESYLQHMADKLTSLCKDDMVKEAIGDSFKNNLVFKLDPKAVTYQNCKFVGGNLEMSCKADYIWSNIDSL
Ga0075175_1369591	Ga0075175_13695911	F096705	AMVLTKRTIFIAYLNVLLVALVVTLAVLHVQRTESLKRSREPSRGLDENLNINTGDVNITCSPSRNPYYRDIQCGNGKCVNFDSTGYREEIREAYGQTICACADGFSHYLAPCDYQRKPQLNAWFASFFGGIVGADWFYLYAGVGGNGGYPVAGVFKLLTGGFFSIWCFVDWIRVLAHGFNDSRGMALYENLTGETQTHHHGTNSQDRHTG
Ga0075175_1380576	Ga0075175_13805762	F091427	MLILGVYFAGISTTISLVNLLATRRTLAIPGLRTRRILLPFISITILLMLRALAVITPVLGSAMLMLALDRH*
Ga0075175_1389602	Ga0075175_13896021	F040485	AFFALVAVAFAATPSTPVWPSAFAASVVAEDNRGNQRYFRWYYDSANLKERFDGMVPWNDQFYYAEQIRDFSKDLQYDVFYQQEYATCFSHPINGTVPHPNFAQFSYVGQALVQYDNVYHWSYWDKTSNMTFNYFDNQATREPKRFDLANLNAGWEETWLFMGFDADAQDASLFTVPSVLLPLCNAVTVAPEKF*
Ga0075175_1397247	Ga0075175_13972471	F001488	MARLELTLNFPKSFQIKTFNVKSEKKLSPLAKLILQSVQFKHFYYVRDDISYLLKSNPVERDFLLQALYSIVISLQNNLSINFFDMWVYEIYINKVSNNNKFMYEKYQNLEPGEYITIKLAYGINTSQEKK*
Ga0075175_1406477	Ga0075175_14064771	F101221	MVQLNKNINLYRERAWRVITYNAHLSENGSTGLYTLSTGSDVRYLTFSTLLSSDEFVNMAIPYNEFRIHKAVFTSLSPQRSDRIPYLYVNVEPSNVAANPNNVRLCASDTSRIFSPRCLSPEAVEYDLRGVGTTTNIWIDTGSTNIPGQFNLGNYINGTLPVSINWEVKFQLIIEFTNPK
Ga0075175_1411345	Ga0075175_14113451	F022205	FLLPYNKFHNATESTSSITTNGFGFPLTRPLRPHAVEVRYAHINPVGIRFRIYAGNGEEVYVSPALVAGPAPQVFRARLPANTDFAMYGPSQTVMDFAGTATYAIRLIMAHKENTA*
Ga0075175_1416222	Ga0075175_14162225	F012678	MLNQHSIEEISEIYSLLDNIKEEYKNGIKPIILKNSPNLFKNPHTVPKLK
Ga0075175_1416504	Ga0075175_14165041	F022205	RTMRNRNKRFLLPYNKFLNETGATASLTASAMGIPTNRPCRPHAVEVRYANLVPSGVRFRIYAGNNEEVYVSPALIAGQAPQVFRATLPANTDFALYGGSQTIIDFAGTATWAIRLIMAHKENVA*
Ga0075175_1422990	Ga0075175_14229902	F104572	MRPIPLLAAGNGVGEPAADRKVERPMSVQGKESVANS
Ga0075175_1423982	Ga0075175_14239821	F067805	MAKKGAKQEEITLSKKDQKKVDKLEAQIPYHEGRGNLEEVTKIKEQVAAIWDKAREAALA
Ga0075175_1432324	Ga0075175_14323243	F022892	IKKPKTKNNGVLKCKKPPHNVASQLKILIPVGTAIIIVAAVK*
Ga0075175_1434765	Ga0075175_14347653	F091427	MLILGVYYAGISTTISLVNLLSTRRTLSISGLRNRRILLPFVSITVLLMLRALAVITPVLGSAMLMLVLDRH*
Ga0075175_1437409	Ga0075175_14374091	F091427	MLILGVYYAGISTTISLVNLLITRRTLSMPGLRNRRVLLPFISITILLMLRALSVITPVLGSAMLMLLTDRH*
Ga0075175_1447784	Ga0075175_14477841	F001602	GIIFGVVLGLIITFSFQTENKCHPQCSWKCDDPHCPAICDPVCEPPKCHTSCAEPKNAICDVKCEKPECEIKCPDKGCEMFDCPKCVTVCKQPHCVTHCQAPKPECEAVCEEPRCDWKCHKPACPKPKCELVCENPNCVPKVECCPCAMGAPRVSTPFPFFKETEGNQGCCSCKNNQARLLSDIDARTRTSRTINDFGTHVVTSENSERIDNFARPKQIGDSYFEGNGKAVKDFET
Ga0075175_1448462	Ga0075175_14484621	F043395	MKKIIITGLVLVGSMNVFGQCPNTTGNYEFSIANDAKNIVIKARNTTGTIRSSYVNPAIDGNFVGLVFGIKWSAKSDIVLYRNSSEAPFNIVPSGGILEKSNFSFQSFGDVADNLPMLSKDFMNGDWHVIATIPYSGNLANGDKFELTECGFDETTNPYFAQMDKDGNYGQFAPNLVRNSAQGANIEVANAVIVYPNPTMGDLNVDVSSSTVTRATFKVLDMTGKTVKTIQSDLVE
Ga0075175_1450124	Ga0075175_14501241	F091427	MLILGVYYAGISTTISIVNLLITRRTLSMPGLRNRRILLPFMTITTLLMLRALSVITPVLGSAMLMLLTDRH*
Ga0075175_1452792	Ga0075175_14527921	F022887	KLKKYYTLTLDTNNDGLVNWSDFEAAIENIVPKEDAEKNSRLKILRKRLEQNFQKYFWDLCEVGDANKDGNIDLDEWLDVMNDIIGQVRDQNTLPEWYEGLHKALFRSNEFFDDRDVLKDEFINMMLTWEIDEEASGKAFDYMTQNGKKKMDYGLFCDFMKQFLVNEESGHPINMGLC*
Ga0075175_1473530	Ga0075175_14735301	F091427	MLILGVYYAGISTTISLVNLLSTRRTLSIPGLRNRRILLPFVSITILLMLRALAVITPVLGSAMLMLVLDRH*
Ga0075175_1476558	Ga0075175_14765581	F043395	GNFVGLVFGIKWSSKSDIILYKNSSLAPFDIVPSGGILSKNDFSFQSYGDEAKELPILSKEWMNGDWNTIATIPYSGSLSNGDKFELVECGFDETTNPFFAQMTKDGILGQFAPNLVGNKADGANIAVSNAVIVYPNPTKGDLNVDVSSSTVTRATFKVMDMTGKTVKTI
Ga0075175_1477308	Ga0075175_14773081	F098745	MKKLFAKDRENRQVVKQLELKHFILKQISTNSNFVKTARWNALYELIHSK
Ga0075175_1483041	Ga0075175_14830411	F101221	KKNHTMVQLNKNINLYKERAWRVITYNAHLSENGSTGLYTLSTGSDQRYLTFATLLSSDEFVNMAIPYNEFRIHKAVFTSLSPQRSDRIPYLYVNVEPSNTSANPNNVRVCAADTSRIMSPRSLVPEAVEYDLRGVGTTTNIWIDTGSTNIPGQFNIGNYINGTLPSSINWEVKFQLIVEFTNPK*
Ga0075175_1491443	Ga0075175_14914431	F101221	NNKKKNHTMVQLNKNINLYKERAWRVITYNAHLSENGSTGLYTLSTGSDVRYFTFSTLLSTDEFINMAIPYNEFRIHKAVFTSLSPQRSDRIPYLYVNVEPSNTAANPNNVRLCASDTARIFSPRSLQPDAVEYDLRGVGTTTNIWIDTGSTNIAGQFNIGNYINGTLPSSINWEVKFQLIIEFTNPK*
Ga0075175_1493270	Ga0075175_14932701	F061006	NDIDNVLTWLRNGGIDEPKFGPNEPFRPTKSIDMPDKRSPTEKARDIENITNWVRNPKDNDRPETEPFKKIDQLLPKKPGQTPEERAKDIDNALTWVRNRGVDQPLFESTSPFEPLNSLPIDRRTPQEKARDVENILNWKRNPKEHDSPETEPFKKIDQLLPEKPGQSPTDRANDIDNVLTWLRNGGIDEPKFGPNEPFRPT
Ga0075175_1493275	Ga0075175_14932751	F061006	GQSPEARANDIDNTLTWLRNRGVDEPKFGPEEPFKTTKNVRMPDNRTPEQKAKDLDDILSWVRNPRDTESPETEPFKKIDQLLPKKDGQSPEDRAKDIDNALTWVRNRGVDQPSLEPTSPFDVLNSLPIDRRTPEQKARDVEDILNWKRNPKEHDSPLTEPFKKIDQLLPEKPGQSPEARANDIDNTLTWLRNRGVDEPKFGP
Ga0075175_1493508	Ga0075175_14935084	F021307	MNRILYEIRCKCNEEISITKKRKSTNRSEGKPLLYPNPTELTSKTFQIKYEKPLSSVAKFLLNSFQNKYLYYAIDDLLYLLNSNVSERDNLLALLYSPVLSLQNNLSINFFD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300007228: Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 8/11/14 A brown RNA (Eukaryote Community Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences