Sample 3300006714

3300006714: Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S7 DCM_B metaT (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300006714 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114292 \| Gp0119811 \| Ga0079246
Sample Name	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S7 DCM_B metaT (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	107601542
Sequencing Scaffolds	52
Novel Protein Genes	56
Associated Families	42

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	18
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora → melanogaster group → melanogaster subgroup → Drosophila melanogaster	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Amphiesmenoptera → Trichoptera → Annulipalpia → Hydropsychoidea → Hydropsychidae → Macronematinae → Macronematini → Leptonema	1
Not Available	16
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Phaeophyceae → Ectocarpales → Ectocarpaceae → Ectocarpus → Ectocarpus siliculosus	3
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Peronosporales → Peronosporaceae → Phytophthora → Phytophthora ramorum	2
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Hymenoptera → Apocrita → Parasitoida → Chalcidoidea → Pteromalidae → Pteromalinae → Nasonia → Nasonia vitripennis	1
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Bathycoccaceae → Ostreococcus → unclassified Ostreococcus → Ostreococcus sp. 'lucimarinus'	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Eukaryota → Sar	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine → Marine Microbial Communities From The Southern Atlantic Ocean Transect To Study Dissolved Organic Matter And Carbon Cycling

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → marine water body → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Southern Atlantic ocean
Coordinates	Lat. (^o)	-28.2362	Long. (^o)	-38.4949	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F002742	Metatranscriptome	533	Y
F003068	Metagenome / Metatranscriptome	509	Y
F005093	Metagenome / Metatranscriptome	412	Y
F005876	Metagenome / Metatranscriptome	387	Y
F005911	Metagenome / Metatranscriptome	386	Y
F007891	Metagenome / Metatranscriptome	343	Y
F008031	Metagenome / Metatranscriptome	340	Y
F010769	Metagenome / Metatranscriptome	299	Y
F011083	Metagenome / Metatranscriptome	295	N
F013645	Metagenome / Metatranscriptome	269	Y
F014386	Metagenome / Metatranscriptome	263	Y
F016139	Metagenome / Metatranscriptome	249	Y
F016280	Metagenome / Metatranscriptome	248	N
F017306	Metagenome / Metatranscriptome	241	Y
F017397	Metagenome / Metatranscriptome	241	N
F017554	Metagenome / Metatranscriptome	240	Y
F018014	Metagenome / Metatranscriptome	237	Y
F018182	Metagenome / Metatranscriptome	236	N
F019484	Metagenome / Metatranscriptome	229	Y
F021310	Metatranscriptome	219	N
F023863	Metagenome / Metatranscriptome	208	N
F025972	Metagenome / Metatranscriptome	199	N
F030404	Metagenome / Metatranscriptome	185	Y
F034581	Metagenome / Metatranscriptome	174	Y
F039593	Metagenome / Metatranscriptome	163	N
F041790	Metagenome / Metatranscriptome	159	N
F042917	Metagenome / Metatranscriptome	157	N
F047111	Metagenome / Metatranscriptome	150	Y
F049032	Metagenome / Metatranscriptome	147	Y
F051931	Metagenome / Metatranscriptome	143	N
F060931	Metagenome / Metatranscriptome	132	N
F067780	Metagenome / Metatranscriptome	125	N
F068736	Metatranscriptome	124	N
F070163	Metagenome / Metatranscriptome	123	Y
F071278	Metagenome / Metatranscriptome	122	N
F074776	Metagenome / Metatranscriptome	119	N
F077350	Metagenome / Metatranscriptome	117	Y
F078612	Metagenome / Metatranscriptome	116	N
F093978	Metagenome / Metatranscriptome	106	N
F099350	Metagenome / Metatranscriptome	103	N
F101226	Metagenome / Metatranscriptome	102	Y
F105005	Metagenome / Metatranscriptome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0079246_1001561	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	772	Open in IMG/M
Ga0079246_1006440	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Diptera → Brachycera → Muscomorpha → Eremoneura → Cyclorrhapha → Schizophora → Acalyptratae → Ephydroidea → Drosophilidae → Drosophilinae → Drosophilini → Drosophila → Sophophora → melanogaster group → melanogaster subgroup → Drosophila melanogaster	508	Open in IMG/M
Ga0079246_1008414	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	503	Open in IMG/M
Ga0079246_1008752	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	826	Open in IMG/M
Ga0079246_1008863	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Amphiesmenoptera → Trichoptera → Annulipalpia → Hydropsychoidea → Hydropsychidae → Macronematinae → Macronematini → Leptonema	566	Open in IMG/M
Ga0079246_1009473	Not Available	682	Open in IMG/M
Ga0079246_1013693	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	828	Open in IMG/M
Ga0079246_1014698	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Phaeophyceae → Ectocarpales → Ectocarpaceae → Ectocarpus → Ectocarpus siliculosus	680	Open in IMG/M
Ga0079246_1018222	Not Available	685	Open in IMG/M
Ga0079246_1019158	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Peronosporales → Peronosporaceae → Phytophthora → Phytophthora ramorum	703	Open in IMG/M
Ga0079246_1021121	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Hexapoda → Insecta → Dicondylia → Pterygota → Neoptera → Endopterygota → Hymenoptera → Apocrita → Parasitoida → Chalcidoidea → Pteromalidae → Pteromalinae → Nasonia → Nasonia vitripennis	828	Open in IMG/M
Ga0079246_1024908	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	922	Open in IMG/M
Ga0079246_1027950	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	877	Open in IMG/M
Ga0079246_1032689	Not Available	770	Open in IMG/M
Ga0079246_1033407	Not Available	781	Open in IMG/M
Ga0079246_1041185	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	698	Open in IMG/M
Ga0079246_1042842	Not Available	668	Open in IMG/M
Ga0079246_1044511	Not Available	675	Open in IMG/M
Ga0079246_1064893	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	862	Open in IMG/M
Ga0079246_1128842	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → Mamiellophyceae → Mamiellales → Bathycoccaceae → Ostreococcus → unclassified Ostreococcus → Ostreococcus sp. 'lucimarinus'	787	Open in IMG/M
Ga0079246_1169189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	626	Open in IMG/M
Ga0079246_1199585	Not Available	627	Open in IMG/M
Ga0079246_1201786	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	534	Open in IMG/M
Ga0079246_1222816	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	549	Open in IMG/M
Ga0079246_1222944	Not Available	659	Open in IMG/M
Ga0079246_1227259	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium inclinatum	508	Open in IMG/M
Ga0079246_1231531	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	936	Open in IMG/M
Ga0079246_1240455	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	590	Open in IMG/M
Ga0079246_1240986	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1674	Open in IMG/M
Ga0079246_1243210	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	734	Open in IMG/M
Ga0079246_1248492	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	523	Open in IMG/M
Ga0079246_1251417	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Oomycota → Peronosporales → Peronosporaceae → Phytophthora → Phytophthora ramorum	691	Open in IMG/M
Ga0079246_1254389	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Phaeophyceae → Ectocarpales → Ectocarpaceae → Ectocarpus → Ectocarpus siliculosus	656	Open in IMG/M
Ga0079246_1254501	Not Available	712	Open in IMG/M
Ga0079246_1259332	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	560	Open in IMG/M
Ga0079246_1259751	All Organisms → cellular organisms → Bacteria → Proteobacteria	672	Open in IMG/M
Ga0079246_1260170	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → PX clade → Phaeophyceae → Ectocarpales → Ectocarpaceae → Ectocarpus → Ectocarpus siliculosus	565	Open in IMG/M
Ga0079246_1260450	Not Available	674	Open in IMG/M
Ga0079246_1262955	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	540	Open in IMG/M
Ga0079246_1266612	Not Available	561	Open in IMG/M
Ga0079246_1267639	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	644	Open in IMG/M
Ga0079246_1270177	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	519	Open in IMG/M
Ga0079246_1270954	All Organisms → cellular organisms → Eukaryota → Sar	551	Open in IMG/M
Ga0079246_1272862	Not Available	556	Open in IMG/M
Ga0079246_1273635	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	523	Open in IMG/M
Ga0079246_1276517	Not Available	683	Open in IMG/M
Ga0079246_1277023	Not Available	1743	Open in IMG/M
Ga0079246_1283236	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	836	Open in IMG/M
Ga0079246_1283791	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	716	Open in IMG/M
Ga0079246_1284501	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Pelagophyceae → Pelagomonadales → Pelagomonas → Pelagomonas calceolata	605	Open in IMG/M
Ga0079246_1290271	Not Available	674	Open in IMG/M
Ga0079246_1297227	Not Available	566	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0079246_1001561	Ga0079246_10015611	F041790	MPTAAPTAAGALSLCARDDGSKMAVVSGSLTFGATRDDDDEEGCLMRSGDDRFSSAYATAAPKTDATISARVMSEGSIRRDYGLLLRVTDDWDDSFRYQPRAGYRCTVNTGRDGTADSTLSVEVLREDGSRSTVATYGPAFALEPGTWYTVSGSAVGNRITCQIMRGDWVLGSAEAVDDTYGDGYFATWNYKDDSGPHWWGDLRIVDAPPPAARRLRGSR*
Ga0079246_1006440	Ga0079246_10064401	F018182	ADGRTLLAKLVFAGSARLAECGLGIDELRAAFKHAHGEEASQGTLTYQLNEQDDDALQLLDDADLALAKKHGSEPLKITSTEVDTRNVFDHASSELAKHGLDAPPTELKKLLDVLQFKPRRLVKCGLAPPKALKCTAKGDEAEEPEDVLVVEALSIEDKEADATLDDAA
Ga0079246_1008414	Ga0079246_10084141	F016280	LNENDEDALQLLDDADLALAKKHGSEPLKITSTEVDTRNVFDHASAELAKHGLDAPSTELKKLLDVLQFKPRRLVKCGLAPPKALKCTAQGDEAEEPEDVLVVEALSIEDKEADATLDDAALAAKLQAEEYGNHDVVLEAVTGKGIKLDANTLHALLRMLHCRPARF
Ga0079246_1008752	Ga0079246_10087521	F101226	MLDASKLKVGDFLEAIASLEPKRVKSDRFGTPPLGTPGFDWDGSISINTYTDYLTSFGPFTIHKYHEEWESGTSIYATDESNGKELMGKIVECMRASGRYRGDESFGTLDDDGAREDSELLREMDEVEADYAGLGKFYRGNIARDHGDDTYDIVYYRYDDGGRVRETRVAKSLIRLV
Ga0079246_1008863	Ga0079246_10088631	F030404	DALTAWRGDEATVSKFWRIDCDDDGFTWERRWPRRKPVIEDVAWDRITRVCWECGEWLCMDNFYLIADHEDREWVVPSGALGHGRLVDVLDRKGIFPTKTYVACQCASEGGVTICEANPNARAPALAPTPSELSYVDAQKAAFKKRCKEAQAARDAETAAKSI*
Ga0079246_1009473	Ga0079246_10094731	F005911	KKGNALLLATAGAIAATFSVYFFVSITTLSADSKQRVAHLYNAYQMGQSLKAKIDGADINESRLGNGTEADVEAPIDEVFHNGKFITLKQMVKKAIIIASKDPTATERSGTDTGYDIVNSGVLIKYADAAGAIIAPTDSPDDATDTLVSDVHLFVNLAGTPDVEFENKPYQAGEPFYYILMDNTSASLAADLLTISTTQYPAGILETKDGGPQAEVSVVLPQDAEE*
Ga0079246_1011653	Ga0079246_10116531	F060931	FDMRNEYLFRMANTVRTGVGAITSCGTNAVWNYPLLDATTPLAHKFNEETMIEDTASSHEAIVAGRKGVYLFKRLVLGARKGTADYVAAVFRWSKGAVQLSWTSFWFPLHKYCYPWLVLFFVVAPIMATVIYFQATRLDKCHRTKYSAEMWKKVGVDEEWCRLGPTVGLISDPIFVCYGIYMVLMSIASFNNPRIGANLIMFENITYFFSSQTAYFWLAIPCVMTMAPDPSALTYDAVTLTIGGLWVEVHMNYIYGHIAAWAPLENNQAPDKL
Ga0079246_1013693	Ga0079246_10136931	F021310	MNPSNIQMKDTNDGVVVKADGRTLLAKLVFAGSARLAECGLGIDDLRAAFKRAHGEEASKGTLTYQLNEQDEDHLQLLDDADLALAKKHGSEPLKITSTEVDTRNVFDHASSELAKHGLDAPSTELKKLLDVLQFKPRRLVKCGLAPPKALKCTAKGDEAEEPEDVLVVEALSIEDKEADATLDDAALAAKLQAEEYGTHDVVLEAVTGKGVKLDSNTLHALLRMLHCRPARFVKLGLVEDVKAARQAYKLG
Ga0079246_1014698	Ga0079246_10146981	F021310	RILNESVKKRRTTKQATMNPSNNISMKDTRDGVVVKADGRTLLAKLVFADSARLAECDLGIDELRAAFKRAHGEEASKGTLTYQLNEQDVDHLQLLDDADLALAKKHGSEPLKITSTEVDSRNVFDHASAELAKHGLDAPSTELKKLLDVLQFKPRRLVKCGLAPPKALKNTIQGDEAEEPEDVLVVEALSIEDKEADATLDDAALAAKLQAEEYGTHDVVLEAVT
Ga0079246_1018222	Ga0079246_10182221	F077350	VAVTDSALANQIQKTEADPNQADIQALLEELEGKLRGALDVLKPSVNAMCDNLKAAASEIRKDKDATKLWGTLNDLQVFLSLVQQICTSVGSQGPKVVEFDNALGDSLGTLETVVVDADDPEEVASFIEQNLIRSFDKWADAEAELRSMANL*
Ga0079246_1019158	Ga0079246_10191581	F051931	GITEGTEIKKRQRKRWVDGHFELQGWKYALHVLFVLMMTIMGTSAWVTFLPGTGVNKDPLPPTMREVEDHMELNAETQNPLCLVAFSISASEPRMMVLRNLVGKMMAWVVRRKFVFESQAMTQKVQLFEEESSLKHLHSPTRVRISEDTNMAYTERLKAFYAKYDPHKVDGVFALLKKYKGKEEELMTELVHKYGPEPPPRSQRELRRARKESSQTISAERRLDEYVEMIDIFQ
Ga0079246_1021121	Ga0079246_10211211	F021310	QATMTSNNISMKDTRDGVVVRADGRTLLAKLVFAGSARLAECDLGIDELRAAFKHAHGEEAAQGTLTYQLNENDEDALQLLDDADLALAKKHGSEPLKITSTEVDARNVFDHASSELAKHGLDAPSTELKKLLDVLQFKPRRLVKCGLAPPKALKCTARGDEAEEPEDVLVVEALSIEDKEADATLDDAALAAKLQAEEYGNHDVVLEAVTGKGIKLDSNTFHALLRMLHCRPARFVKLGLVEDVKAARQAYKLGGRACAKEWFRNKGGHGKGGK
Ga0079246_1024908	Ga0079246_10249081	F017306	MSSMMDNLQLSQRVGPSDYGCDPYQVVVSTANGDELVHEYCLYSSAYGGPVRPDPVTGLRAEQTGGGRATIKWEWSENSFDLASPGASFERDVILEPLAWAGDVRKTPKTKPVARAPKVEVSRELRAADVAVKSEWRMNGCDDEWEIHVSHAPSGSRLVWKGTSTAEHQDVKGLRHVGADGVVRVDFVYYVGENGNNSASDRSLFVKLGETGIEWVPKHVSNGRMYDGRCSGTL*
Ga0079246_1027950	Ga0079246_10279501	F017397	WSKGAVQLSWTSFWFPLHKYCYPWLVLFFVVAPIMATVIYFQATRLDKCHRTKYSSKMWKKVGVDEEWCRLGPTVGLISDPIFVCYGIYMVLMSIASFNNPRIGANLIMFENITYFFSSQTAYFWLAIPCVMTMAPDPSALTYDAVTLTIGGLWVEVHMNYIYGHIAAWAPLENNQAPDKLGLLRAQQMFFVTAPLHTLAIFQGTQDSWKILFAAKDASRWASFDSINAITTAKLWVLTMMVMLSSSIVVGLVRIGTAKKPFDEIERWLGVVMSFVFLSLTAVPSAAMFFH
Ga0079246_1032689	Ga0079246_10326891	F077350	VTDSALANQIQKTEADPNQADIQALLEELESKLRGALDVLTPSVKAMCENLQRAANEIRTDKDATTLWGTLNDLQVFLSLVQQICTSVGTQGPKVIEFDNALGESLGTLETVVLDSEDAEEVAVFIEESLIRAFDKWPDAEAELCKIAEV*
Ga0079246_1033407	Ga0079246_10334071	F077350	EVAVTDSALANQIQKTEADPNQADIQELLEELESKLRGALDVLTPSVTAMCENLQKAANEIRADKDATTLWGTLNDLQVFLSLVQQICTSVGTQGPKVVEFDNALGESLGTLETVVVDSDDPEVVASFIEDSLIRAFDRWAEAEAELRTIAEI*
Ga0079246_1041185	Ga0079246_10411851	F016280	MTSNISMKDTRDGVVVKADGRTLLANLALAKKHGSEPLKITSTEVDTRNVFDHASSELAKHGLDAPPTELKNLLDVLQFKPRRLVKCGLAPPKALKNTIKGEEQEEPEDVLVVEALSIEDKEADATLDDAALAAKLQAEEYGTHDVVLEAVTGKGIKLDSNTLHALLRMLHCRPARFVKLGLVEDVKAARQAYKLGGRACAKEWFRNK
Ga0079246_1042842	Ga0079246_10428421	F005911	LLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQALKAKIDGADINQARLGSGTEDDLEAPIDDVFHNGKFISLKVMVKKAIIIAADDPTATARAGSDMPYDLDNSGVLIKYADADGNVIAATETGSGTDTIVADVQLFVNLAGTPDATSNSPYTDGDPFYYILMETATSGLAADDITVNLVQFPAGILATNDGGPQAEVSVILPQDDED*
Ga0079246_1044511	Ga0079246_10445111	F005911	LLATAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQAIKAKIDGADINQARLGGSTEAGLNSPIDDIFHNGKFITLKQMVKKAVIIAADDPTATARAGTDLSYDLDNSGVLIKYADADGNVIAPDAGGDAIVMDVHLFVNLAGTPDAASNTPYTDGDPFYYILMETAESGLAADDITVDLTQFPTGILATNDGGPQAEVSVVLPQDDED*
Ga0079246_1064893	Ga0079246_10648931	F021310	ASFRPSRRILNESVKKEEEHQATMTSNISMKDTRDGVVVRADGRTLLAKLVFAGSARLAECDLGIDELRAAFKRAHGEEASKGTLTYQLNENDEDALQLLDDADLALAKKHGSEPLKITSTEVDSRNVFDHASSELAKHGLDAPPTELKKLLDVLQFKPRRLVKCGLAPPKALKNTIKGDEAEEPEDVLVVEALSIEDKEADATLDDAALAAKLQAEEYGTHDVVLEAVTGKGVKLDANTLHALLRMLHCRPARFVKLGLVEDVKAARQAYKLGGRACAKEWFRNK
Ga0079246_1128842	Ga0079246_11288421	F078612	GSDATMSLVDNDVAATVLHEFVYHGIKNLGFDESNVHVHVSNGGGHSDIVAIEWEIELNNQYYKALDTKQYFNYLFKNDNWHNHVTSWMKGQGKGSILKAAETMKNLDEFALILPAHIDTKPQSNFDDASHTEEVKSLIDKWLGSKKPDTDTITLYAGCSPTSTLTFTPTDFGAQVGASIITKSLNNDFLFDHAVEMEQTDCGTFKTKVLPKKGEEFGFYLFWKDNLTEWESVSDIGCTGPNTDKCPPGDVLPSLAACTNA
Ga0079246_1169189	Ga0079246_11691891	F003068	IIMRKILTVISVLSLISFNANALERGDISATIGVAANSAVYGASAKETNRDDSSNIRRTASESGVFTESHTSGFIELNVGEFVSLGYEHTPDSITTPQADRTTNTNAKTTVSVDFNDLNIAYLKLNTPFGVYLKAGLVETDLDIKESMASGSTYSNVSTEGTIMGIGYNKALGERLAVRVEGSYMELDDVSTSNGVAADGSTVANSGR
Ga0079246_1189618	Ga0079246_11896181	F034581	GHMLVWETSQIYSKGVELHWTGSTSEYVFDIYSTNTRPSQSVALSAPSSAEEMRMPRFPAEMNITCRPGFNTSSWGPNFYRTSTSDGEWAGSMPICVGLELPALYETAVLVKDGSLQVTSVQELTPEFVTGRGAAMPLLEDRDECGDDQLWCDLIAPSEGHLLVWETSKSYSQEVELHWT
Ga0079246_1199585	Ga0079246_11995852	F017554	MNTTILYSFPDDLKYRYMSFNTYEQALKAIELFKQIEVKAEVKV*
Ga0079246_1199585	Ga0079246_11995854	F049032	MINTNNYSHNRGSKVINSMQDYSEYDNMYEEILHYYDTEKYTVFPQVIHNSCGKSI
Ga0079246_1201786	Ga0079246_12017862	F005093	MSQTNDKFRTLTITEAEETALVEIIRYFNDMGLPENVNNEDYNTLTDKVCEPAFWEYN*
Ga0079246_1222816	Ga0079246_12228161	F067780	NLNAGQAEYPRRLPIDQSSLPLQRDATMPRRAALLLVAASPARALLAPQTVTRTQTRRNLATTPDEISHAAHYNAYDYNAESQGASEDDWRSMATAAGAIDEDPAEKWAGLFTPWDASQETAAEDTSLEKIYAVQRDPVNLPPTPQQNFGGMFSPWSDEDDSLDKIYAVQSDPVAQVVPHYE
Ga0079246_1222944	Ga0079246_12229441	F005911	TAGAIAATFSVYFFVSLTTLSEDSKQRVAHLYNAYQMGQSLKAKIDGADTNQARLGAGTEDDIESPIDEVFHNGQFIDLKTMVKKAVIIASDDPTATARSGEDTAYNLVKSGVLIKYADDEGAIITPTAHGSGSSTIVGDVHLFVNLAGTPDATTNAPYGATDPFYYIVMETDNSGLTATDITVDLTMFPAGILSTNDGGPQAEVSVILPQDTED*
Ga0079246_1227259	Ga0079246_12272591	F016139	LAWKQQTSIRVWGPSSCSFLAHSSNINDLLEGLDGVLKDWLDGLHDTESSLHIVDLWLHTLDGLHLSGDLNEWLSIIESLEDSGSKSFLDVLDSSGLGNGGIGITAGLESLSLVELGLKGDEELVLIHSLISLHGLEELSLVVVVVVVS
Ga0079246_1231531	Ga0079246_12315312	F047111	MQLTAKSIVLDYYPIKNGNSNILPDKFLRILSFKGETQTKRIVNEAQMNEEILDRVSNYNYNVTDNLLNLPQFHTLGGAL*
Ga0079246_1240455	Ga0079246_12404551	F018014	MIVNLTKNEIKHLVYLCGKGDADFPELNQNILDKLQPLIDACVCKSQGEN*
Ga0079246_1240986	Ga0079246_12409862	F008031	MAAYKNYAGAILEPGNQINKLSGFNHEGVYGWPGIEAYELIGYHKITNKTGTKASHKSFNITVPSPDRREGDRVRNDRSSLVVQASSARPAYVYGASVAIAQDIPSGGEPSFPASPVTADLKGTTGEFIFVGPDNSTAPFGVPATQA
Ga0079246_1243210	Ga0079246_12432101	F023863	MAMLALSSLSAAQNPWVNRRKNKDKDAPVAADPASGDTDFSKLNDMVKNLQQAGAAGGAGGEDMFAGMGDMWESLMDSPEMEEMLANPELLKATIKNNPLINAIPGASEQVEALLQSDAFNDPAQLKQAMRQGVDAMKAVGSEFGSQLGAQMKLAQQNPEAFKAQMEAMMSQLAGGPEQGRALMEAAKGLWDGSADPAQLEALSKLPGMEALADPEAMKRQMAELQKMMG
Ga0079246_1248492	Ga0079246_12484921	F070163	ESRLWCGHLRECLDATPSYGSVTDPDALSRRWRKLPWAKQRELFKSWAQPRASDCYPGDLRLGWWWDLRSVGFGHYASWSDDDISTVVTKTTYYEVWLSASGTRVYRKVSYSMTLPANLVIPVVLAVGAIVVAGLAVGAAKLLLWLW*
Ga0079246_1251417	Ga0079246_12514171	F011083	FLMVYHDPYGGVWRTDGIVASTSDIIAASRVQDALRALPNEVLEGVTVKARTSDTVSLCTRFHDGVQHLGGYSETTDGNFKNSKMSTNYCETTYTMATGSNKMDFTIEFADKPGQTGVQYLFEVDINKRGAGSFPVSGGITGTGAYSVAEMNFNVNLGNLSELAECSDRGLDDGDGQCECFDGFRGLACEEQEALV*
Ga0079246_1254389	Ga0079246_12543891	F042917	PRCSRRTTRTSRHLSIRIMVRTLKTALLLGASSSALMVPGKPRTKTLRFVEVAERISTSEDKAETFETADYLQDMDRYEGKNNVIPTGFDVNAAIDAAATESTTFIDVVVEETVAKVAEERKDEAAADAVAEVEKKLETKLETTMEAIEAAAVPMEEIEVGPVGEFLIKWGFKDDPRIPEDERIPAMQRIKDSGKAGVIAYALTEGAFWIGSVPFAIA
Ga0079246_1254501	Ga0079246_12545012	F068736	PGIAGFKTKMEFLACADLTSGTPDAKVTFGLRNKAKNTVELERTLVGEEIGIDERVKVDIGSTLRYPDKLELRADEVSNLRQKLEQANLEVDLDKIAICIDLD*
Ga0079246_1259332	Ga0079246_12593321	F005876	TMEDLVAVNRLLLEQLTSVANNHPEKDNILRALQPAYARIDGAGERFRSLEGSIRDMERKLGEGGEGGEMGKFRASGQQTDAQILKKVSTRLQDFEAQITAQLSNMQGDFDKKLSHLNRGSSGMKGLDTTTAVAGIETVVEDLDALKYDVGELKDLLNNNKGEINHVRRIVLACERDMEDFTAAMD
Ga0079246_1259751	Ga0079246_12597511	F093978	LLDEPLMKEAFNYLKTRYREEIFNTSYSDHNQRQVLWMAYNMVEKIKGHLESVMNEGKLAAKELDQLQDLTK*
Ga0079246_1260170	Ga0079246_12601701	F014386	IEITSSSMTDAEVQQVFKCRVNENLKSTELPLLRLGGTVKQNPHMRAFWASTCSFFIAFVGWFALAPVAVDVMYSIGQCENQLYLDSGDTKATIEHDLKRPAFIAFKSLKTGKPYCVHGKEEDGSDCKEIPDVADIKECEEDASSEECKFLKETKYDVDELPKCVCGKGTQCKNIIANGGITSVGSTV
Ga0079246_1260450	Ga0079246_12604501	F010769	FVNIMQYNDVDGSCELSMQELMAVCTGPMFQTCLDFLASSEPTTQCEPVFLGPDMGFVNIMVYNDNDGSCQISLQELQAVCSGAMFQTCMDFLESSEQGPQCDSVFLGPDIGFVNVMVYNDADGSCEISMVELAQVCQSFFQECMAFLESSEPTQCDSVYLGPDMGYVNIMVYNDADGSCELSMEELLEVCSGAMFQTCLDFLASSEPSQQCDTVFLGPDLGFV
Ga0079246_1262955	Ga0079246_12629551	F105005	LSSCAKAPASHVRNRARGIEFAASPSRNPGFSGTQTSYTMYKAITLALALSAPALGLKKPAHGAAALRVRGGTFGFDAHQTGEQCGIEEPEKEVVKTIKTAVTYPIKKVFGIARGGALLDVSARETAEQCEIEECESLVVRTIKAAFDYTAERVLESGVVPDELAKD*
Ga0079246_1266612	Ga0079246_12666121	F039593	PKHPPMAFASHSAWISELREQYATIGSRGPVPSGFGGGLGEPQLMEHLDERFNEALDFVDEPVYRSVSTDLSWQPANDELYFDSDEPVYRSFGGFGSSTSAGEDVDEGLPGSHEAWMRSMPPLVQRQSACSHL*
Ga0079246_1267639	Ga0079246_12676391	F016280	FKKAHGEEASQGTLTYQLNENDEDALQLVDDADLALAKKHGAEPLKITSTEVDTRDVFDHAAAELAKHGLDAPPTELKKLLDVLQFRPRRLVKCGLAPPKALKNTLKGDEAEEPEDVYVVEMAEALAIEDEPKPVNSGLAALQKTANEAAAALDKEADATLDDAALAAKLQAEEYGNHDVVLEAVTGRGVKLDSNTLHALLRMLHCRPARFVRL
Ga0079246_1270177	Ga0079246_12701771	F025972	KQKMIIRNTGSEDLAVYFMGALHEGDLSLWDGSETLNDIVSPGQVTARYVRYNDSFAVRSGDLKWRVRLSLYKNDDKEQPYKVTFHNVMTDEKDQPVELKHHAAGYLWIEPNHHVTHSAAQGHEFALRDRESKERLAVSVHALGRDEL*
Ga0079246_1270954	Ga0079246_12709542	F013645	MNPEFLLGTAFNIAYWHRKYHSGTICKGVTNPHTSNALSGCDKE*
Ga0079246_1272862	Ga0079246_12728621	F074776	VLNKVFGQDIFPQYGIGENTVSIPRSIIIERFGSMSNFRQMVQKDGNNNNVPPSQGIMTSPQTT*
Ga0079246_1273635	Ga0079246_12736351	F099350	ADRLPVAMLRVAFPLDGDGLAAPAPYDDGSGSLLSIDFAPGSPARDGIEAYDSGDHSPSMWAADHSARGESTVRERFLRLWNFFPAAARVRMDVTRASPRRWSDADYHDLAKLFLCDLDERAVEVVNTEAHDGWYKNDVLVLDDGWASVGPGGIMQYPFDHHGWELPEAKREQV
Ga0079246_1276517	Ga0079246_12765171	F007891	MTLYSNFFSSAINSVETKEKEVLITYSSNIAKEYVYNCEDVPAFTNNLCSVLISNELQQDGGSVGSFIHRSRKDQVLTEQ*
Ga0079246_1277023	Ga0079246_12770232	F019484	YFLTILGGSLKKIAKKITTNVPISKKVYTNASII*
Ga0079246_1283236	Ga0079246_12832362	F042917	MAARITTLLLSASTTVTALQVPARRAGSAPKTLRFVEVAERIATSEDKAETFSAGDYLNTLDRFVGPDSTEPANNIIASPFDAEPNAFDAMIDEAAEEAAKVLDGVVEEVVQQVAEDRKDEAAADAVAAVEAKIETKLDSTMEAIESAAVPMEEIEVGPVGEFLIKWGFKDDPRIPEDERIPAMQRIKDSGKAGVIAYALTEGAFWIGSVPFAIAAVTLATGSFPDIASDEGKAAIGADAFIFINF
Ga0079246_1283791	Ga0079246_12837911	F101226	MLGLDRVGGFLEAIAALEPKEIKSDKFQYPKSLSDPDWDGSISINTYTDYSTLYGPFTVHTYHEEWDSGTDIYATDAETGKDLMGYIVQCMRASGRYRGDELFGTPDDDDEREDSERLREMDEVEADYAGLGTFYRGNIARDHGDDTYDVVYYRYDDGGRVRETRVAKSLIRLVHRWR*
Ga0079246_1284501	Ga0079246_12845011	F018182	MTSNNISMKDTRDGVVVQADGRTLLAKLVFAGSARLAECDLGIDELRAAFKRAHGEEASKGTLTYQLNEQDVDHLQLLDDADLALAKKHGSEPLKITSTEVDARNVFDHASSELAKHGLDAPPTELKKLLDVLQFKPRRLVKCGLAPPKALKC
Ga0079246_1290271	Ga0079246_12902711	F071278	YFFVSISTLSDDSKQRVTHLYNAYQMALSVKGKINGDSMQGNKLDGTNVEDDIEDSLDPLFHNGSFITLKQMVIASIIIVQNDPTTTSERGQKIPYDVINSGVLIKYANSTDDVIAPSAENRAIAARADLAKVHDLHLFVNLAGTTDIDSRPNGPYTAGDPFYYVVMASDAETGRTDGLTDDLKTVNLTQFPTGMLATNQGGPQAETSVILPQDFD*
Ga0079246_1296875	Ga0079246_12968751	F002742	SVMFALFCFLVAAEAAVATQREDKNRPVTKVINLIKDMMAQLEKEADEDEEVYEKVACWCQTNDKSKTTSIGDAEDAITSLTADIEEFTASSARLNTEIKNLEAEIAKNQEALDKATALRQKELAEFNGEEKDMLQSIGALKSAVTVLSKHNSFAQVPSEALLNIAATLKWQFHKHRDILAEITTPAQHKAIAAFVQAPGDYFDAEPTFKQSYAPQSGQIFGILKQMKETFETNLSTAQKEEMAAQQAYEDLKAAKEAEIKAGQEQRDAKTQEL
Ga0079246_1297227	Ga0079246_12972272	F007891	MTLYSNFFSNAVESVETKENEVLITYSSNIGKEYAYNCTDVPSFTNNLCSVLISNELQLDDGSVGQFIHQARRDSVLTDK*

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300006714: Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S7 DCM_B metaT (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences