Sample 3300005511

Overview

Basic Information
IMG/M Taxon OID	3300005511 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0053073 \| Gp0061137 \| Ga0077121
Sample Name	Combined assembly of arab plate scrape MF_Col (Combined Assembly)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	2241371899
Sequencing Scaffolds	57
Novel Protein Genes	64
Associated Families	53

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis	2
All Organisms → cellular organisms → Bacteria → Proteobacteria	4
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1
Not Available	7
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-33	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Arabidopsis, Maize, Boechera And Miscanthus Rhizosphere Microbial Communities From Different Us Locations
Type	Host-Associated
Taxonomy	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere → Arabidopsis, Maize, Boechera And Miscanthus Rhizosphere Microbial Communities From Different Us Locations

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	Unclassified
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere

Location Information
Location	University of North Carolina, USA
Coordinates	Lat. (^o)	35.9082	Long. (^o)	-79.0499	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F001574	Metagenome / Metatranscriptome	669	Y
F002233	Metagenome / Metatranscriptome	580	Y
F003272	Metagenome / Metatranscriptome	496	Y
F007178	Metagenome / Metatranscriptome	356	Y
F008003	Metagenome / Metatranscriptome	341	Y
F009763	Metagenome / Metatranscriptome	313	Y
F012265	Metagenome / Metatranscriptome	282	Y
F014281	Metagenome / Metatranscriptome	264	Y
F016724	Metagenome / Metatranscriptome	245	Y
F019503	Metagenome / Metatranscriptome	229	Y
F019507	Metagenome / Metatranscriptome	229	Y
F019855	Metagenome / Metatranscriptome	227	Y
F020707	Metagenome / Metatranscriptome	222	Y
F025057	Metagenome / Metatranscriptome	203	N
F027578	Metagenome / Metatranscriptome	194	Y
F038811	Metagenome / Metatranscriptome	165	Y
F044594	Metagenome / Metatranscriptome	154	Y
F047261	Metagenome / Metatranscriptome	150	Y
F051218	Metagenome / Metatranscriptome	144	Y
F052711	Metagenome	142	Y
F053537	Metagenome / Metatranscriptome	141	Y
F057616	Metagenome	136	Y
F057637	Metagenome / Metatranscriptome	136	N
F059087	Metagenome / Metatranscriptome	134	Y
F060073	Metagenome / Metatranscriptome	133	Y
F060793	Metagenome / Metatranscriptome	132	Y
F066929	Metagenome / Metatranscriptome	126	N
F066965	Metagenome / Metatranscriptome	126	Y
F068795	Metagenome / Metatranscriptome	124	Y
F070258	Metagenome	123	Y
F071622	Metagenome / Metatranscriptome	122	Y
F072533	Metagenome / Metatranscriptome	121	Y
F073708	Metagenome	120	Y
F074001	Metagenome / Metatranscriptome	120	Y
F075015	Metagenome	119	Y
F080119	Metagenome	115	Y
F080316	Metagenome / Metatranscriptome	115	Y
F084157	Metagenome	112	Y
F085924	Metagenome / Metatranscriptome	111	Y
F086200	Metagenome	111	Y
F089476	Metagenome / Metatranscriptome	109	Y
F092261	Metagenome	107	Y
F092520	Metagenome	107	Y
F092690	Metagenome / Metatranscriptome	107	Y
F094025	Metagenome / Metatranscriptome	106	N
F094368	Metagenome	106	Y
F095729	Metagenome	105	Y
F096718	Metagenome / Metatranscriptome	104	Y
F098177	Metagenome / Metatranscriptome	104	Y
F099462	Metagenome	103	Y
F101930	Metagenome / Metatranscriptome	102	N
F103484	Metagenome	101	Y
F105520	Metagenome / Metatranscriptome	100	Y

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0077121_10010491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12637	Open in IMG/M
Ga0077121_10012866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	11115	Open in IMG/M
Ga0077121_10028868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6445	Open in IMG/M
Ga0077121_10031420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter	6074	Open in IMG/M
Ga0077121_10046358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis	4645	Open in IMG/M
Ga0077121_10049571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → Ramlibacter tataouinensis	4431	Open in IMG/M
Ga0077121_10056780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4031	Open in IMG/M
Ga0077121_10066132	All Organisms → cellular organisms → Bacteria → Proteobacteria	3622	Open in IMG/M
Ga0077121_10067627	All Organisms → cellular organisms → Bacteria	3564	Open in IMG/M
Ga0077121_10086698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2977	Open in IMG/M
Ga0077121_10129254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2219	Open in IMG/M
Ga0077121_10138473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2108	Open in IMG/M
Ga0077121_10144465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2042	Open in IMG/M
Ga0077121_10159883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1894	Open in IMG/M
Ga0077121_10173379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1785	Open in IMG/M
Ga0077121_10187702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1683	Open in IMG/M
Ga0077121_10190512	All Organisms → cellular organisms → Bacteria → Proteobacteria	1665	Open in IMG/M
Ga0077121_10204792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1577	Open in IMG/M
Ga0077121_10218515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1503	Open in IMG/M
Ga0077121_10221850	Not Available	1486	Open in IMG/M
Ga0077121_10223669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1477	Open in IMG/M
Ga0077121_10227091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1461	Open in IMG/M
Ga0077121_10239262	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1405	Open in IMG/M
Ga0077121_10271463	Not Available	1279	Open in IMG/M
Ga0077121_10295754	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
Ga0077121_10303186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1179	Open in IMG/M
Ga0077121_10317612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1139	Open in IMG/M
Ga0077121_10319606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1134	Open in IMG/M
Ga0077121_10324928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. sBnM-33	1120	Open in IMG/M
Ga0077121_10342597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1077	Open in IMG/M
Ga0077121_10344695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1072	Open in IMG/M
Ga0077121_10354301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	1050	Open in IMG/M
Ga0077121_10367958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	1021	Open in IMG/M
Ga0077121_10381434	Not Available	995	Open in IMG/M
Ga0077121_10383152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	991	Open in IMG/M
Ga0077121_10388599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	981	Open in IMG/M
Ga0077121_10390922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	977	Open in IMG/M
Ga0077121_10391969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	975	Open in IMG/M
Ga0077121_10404869	Not Available	952	Open in IMG/M
Ga0077121_10467399	All Organisms → cellular organisms → Bacteria → Proteobacteria	856	Open in IMG/M
Ga0077121_10480300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	840	Open in IMG/M
Ga0077121_10500467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	815	Open in IMG/M
Ga0077121_10518317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
Ga0077121_10521025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	791	Open in IMG/M
Ga0077121_10561199	All Organisms → cellular organisms → Bacteria → Proteobacteria	749	Open in IMG/M
Ga0077121_10601205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → unclassified Comamonadaceae → Comamonadaceae bacterium	713	Open in IMG/M
Ga0077121_10603500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	711	Open in IMG/M
Ga0077121_10617955	Not Available	699	Open in IMG/M
Ga0077121_10619188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	698	Open in IMG/M
Ga0077121_10654761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	670	Open in IMG/M
Ga0077121_10722829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	624	Open in IMG/M
Ga0077121_10762632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
Ga0077121_10797075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	581	Open in IMG/M
Ga0077121_10852910	Not Available	553	Open in IMG/M
Ga0077121_10869979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	546	Open in IMG/M
Ga0077121_10938937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	517	Open in IMG/M
Ga0077121_10942990	Not Available	515	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0077121_10010491	Ga0077121_1001049112	F012265	MDNRRIDRTQLDRTESRTPDGVGGPAQDRAVDSPEFARQIAAAIHERKGTVGEAVLRELVTEFVKPIVSDPQILSTERAIVILEQLLTTVLPQLKESEEFNNLAKTVLGEEIEQRRNLRARSLEDTPT*
Ga0077121_10012866	Ga0077121_1001286613	F092690	VSDTRFPDDRKARLVRNLLALRTVLAMDQMQTGRWSERIEEIDEELAGLGHDMKSIAAFATESLRRTFLLPRLVNRRKRAAHRRLGREAPQE*
Ga0077121_10018874	Ga0077121_100188741	F094025	ILASRPPINLGSQVGQQGAPSQAGSAPAAQGAQIEERRLEAKISDDPKKAQDGKNTGKPADTTLQTVLTNSGMKNVSNPPSEADLKTYYSKNGPAHELIAKGSYQEAAAEYRKLADKAADPAEQKRLTTAADQLEVAQKMKTAKVGSLQFPPTETNVTDYFKTMKGKPISEIKDAFQSYANAFYVHSEKKGVDRGDVVYSEHKYKEGTIVYNSHAPVSWKEVTDDREVHSDGRRIIDCEGYAHMGQQIFKAAGFQNVNFGVVARKDDPHTSQNESLTDQHIMVSGSRTIMVDGKPKTEMAVISNNRIDSKIADDNLKPADLKNFQTGLFARTFQQTYVDKVPGLIRVGPEAWREEFKLEDDIKAWQKK*
Ga0077121_10028868	Ga0077121_100288682	F057637	MTETLVVRELAVRELDPKLGNLGGADGARLGRLRATAADLEKTKMMTFDQIEQPQPRSDFEIAKISAWCRKHGYACHVSSRGQLELRTKSSAMATRGRTTALAM*
Ga0077121_10028868	Ga0077121_100288683	F060793	MIARNHIRAARYRALALTETDQERANLLDRLAAEAEHGVLCTLRHHLRLVYSADEAVCAKAA*
Ga0077121_10031420	Ga0077121_100314206	F074001	MTRNTSPAPLEQARSKTDQVQRDLEVASAELGLTHGALDRELPPDVKQGDVAWALHQNKKLERKVQQAAEELEEVTDLLDQAKAGGSGGDGRSRDPH*
Ga0077121_10046358	Ga0077121_100463581	F094368	MAQPIPFLDPEVKPPDYRVPRGRSGHGAKSALETLLKDLDRVRRAKEAYGDLPKR
Ga0077121_10049571	Ga0077121_100495715	F094368	MSQPIPFLDPEVKPPDYRIPRGRSGHGSKSALETLLKDLDRVRRAKEAYGDLPKRPDSSLRY*
Ga0077121_10056780	Ga0077121_100567802	F038811	MHPAFWPMHAFVFWSDVFMIPWKMLMAPVSSSMKEATAATDPAAVAGLDPVSPEEIGTSATDFRTNSDTSH*
Ga0077121_10066132	Ga0077121_100661325	F080119	MRRLIFLWLVLPACLLGPGAVAQSDPRQAVCQASWERCLGSGGDGKNWKPIYDRCMKARVACLGGRAYLPTVPQNFSSGAILEQGAGASADPANADPATQDAQCQNGGRRGARSNCVLAMAGEGYGQSFSLLGPGVPMARIQRVSSVVKCAGGKPASFYSNGRIESCTLDNSGMATVALTDTSGKTANCAARAVVRFDPEGRLAACDRP*
Ga0077121_10067627	Ga0077121_100676277	F080316	MVIEEEILARIRAAKTWDSSARVEDFQVQAADNGFVLINLKTRRAQLLYDEDSELSDLEQLFPENEKRYRGLL*
Ga0077121_10086698	Ga0077121_100866984	F105520	MDALSRTELAFLHRLLLDLQRQGEERGDAQGVAALELALAVLRWDGETPPPLDAQVGLGAAIQSRLGLDALCAWHQWRAERRRHPTLTT*
Ga0077121_10129254	Ga0077121_101292542	F003272	MARVGHMMLAAAMLAAMNKPVAAQVLDATYRGTMVCDKLPSISQQTREAIEVTVSGGAVRYSHVVRLHNSAVEATAEQGTGTLDGQNINLQGSWKSGSRQYEAIYSGSFVRRSARLKGTQAWNDGGKTVTRACAGAIKRPLKPFLPRDRR*
Ga0077121_10138473	Ga0077121_101384733	F066929	ACRTSKSLDLAAYQKLARTMIVAVGDNMREFSASVQDAPKAEAQFAAQAGRGAAGELQRLANDPVVKEFLNRNRKRAAVELTQTYLENIERALLLRRVQARQASPLATGDDILLEIEKVSSSPLDYADANNKKRAMNRFLELMAIAERAVSETSNQTELLKWGPVRLMVVLEGPLKEHCVMKG*
Ga0077121_10144465	Ga0077121_101444654	F003272	MVRVGPVMLAALAVTATPAAAEVLDATYRGTMVCDKLPFTSDKMREAIEVTITGGAARYSHVVRLRNLAVEATAEQGTGTVDGQKIDLQGTWKGGSRDYAAKYSGSFVRRSARLKGTQTWTDGGKTVVRACAGAIKRPFKPFLPRNKKQAAAR*
Ga0077121_10159883	Ga0077121_101598832	F070258	MMARRAIGLLLMAICIAGLLAFNIHPPEGDDSNLLNKLVVTAVLGGGAFAAWKFLVRTRRA*
Ga0077121_10173379	Ga0077121_101733792	F001574	MTSLRLSADARDFLNPNGLARPALEKFAGAWLACFVVMAHGDFANALSLDHARIASICGTIGALVAVALLTQMDRTTISLPRQMTISAFATFIGDVFAHPSHFPPQWAEPLVTAGVSAAIAVALWQARRLIKSL*
Ga0077121_10187702	Ga0077121_101877022	F073708	MYVVFVEEVGGPQDPIHTARTLEQAFAQIVCRCGYSYRFEPADEHGWCLFLTDVERPERSPDPIHSSCIKPRDAQHDLMSQAVDGRLRGHVALHIDVYRRAQVLRAGNGSKVLLEAYG*
Ga0077121_10190512	Ga0077121_101905123	F086200	MERIPDVFEIPEPMRGKPLPWLTAIAMTAIVVVATLALVVANEVPSENPQVMVDR*
Ga0077121_10204792	Ga0077121_102047923	F071622	MKDGKPSNAGEPQGWRPASAGRKGGPARQRGFVERATASGHSGHGSESVRPHLRDQLRLKSLLPQPYPTPEPEGPKDDQAY*
Ga0077121_10218515	Ga0077121_102185152	F002233	MEDKEMRQVRSLLSSASSRIVRRFAQIVAIAAASLPAVGA*
Ga0077121_10221850	Ga0077121_102218503	F099462	MSAQTQIVYLEYLITVIEEAGRFTSRVTRDGGLIEHDGHFSEGWKTASCASLNRAVQVAKTAIDNDQIR*
Ga0077121_10223669	Ga0077121_102236692	F057616	MNGGDGWVNDKAVPLLSGAPPQIRERDHGDSHAADIDQVSEESKPA*
Ga0077121_10227091	Ga0077121_102270911	F092520	MRRIIQANIDRFRDLLKTETDATKRAMEVRLLAEEEAKLEQLPAYDKKEPQAY*
Ga0077121_10239262	Ga0077121_102392622	F092261	MAYKIQYFRDGKPYAEVYWDQPLPQTRETAKKGLKRNRAESATILDMDQGLKPVETLTASP*
Ga0077121_10271463	Ga0077121_102714631	F025057	LRARSDRFGGGGTCSGSSAARGLRGEMGGLSLIEAT*
Ga0077121_10295754	Ga0077121_102957541	F002233	MQQVRSLLRGASSRIGRRLSQIVAIAAASLPEAGA*
Ga0077121_10303186	Ga0077121_103031862	F103484	MKLVPHVAKVALVGLAMAGLTAPVFAAGLMPGNGGTIKLPTVLPPSVKESLSLLPSSGGTSGFDVLGQKFGVQNGALDFFSVRPSEGGEFKPLFRGGFGEGGLKLQLKW*
Ga0077121_10317612	Ga0077121_103176123	F089476	MKKAFLTAVIVEIAFLGVATTASLADDLPALNSKWREPQHRTCLEITQISDALPGPAGCAQIAGRMKDDLMIGYACKSGSDISFFSGLQTDNSIKPDIFIGRYSAEAIIAQYCTRITNDWPPEYDCRNEMTFKSVSSCTP*
Ga0077121_10319606	Ga0077121_103196062	F068795	MGIDMTKETKPLWVWLSLALLAIGSVAYITTVFLFEYIIGLF*
Ga0077121_10324928	Ga0077121_103249281	F007178	VKMIKRGDRVKLTARVAAAFNNNKRPGKVDWTDRRGVIERISANKVHAFVLWDGRKTPDELPINGIEPG*
Ga0077121_10342597	Ga0077121_103425972	F059087	LKSRMSVHISFTHHPIGKPLPVGAVAFAIGLKLLVPTPGKHGLVAVKDLHE*
Ga0077121_10344695	Ga0077121_103446952	F044594	MSVLAHTSHIAYRTAPRAARQPGQFRRLLDRFLEWRQRRVEQDIAIHLGITGGYITDEIERRIFERLMTRGGFRG*
Ga0077121_10354301	Ga0077121_103543012	F019855	MLQAVSSDATFGRAPTFNTDTGFTLALSPDKKAFTATFSGLEAILEAKSTPIVTRTFSFAIPLVDTEPGDEIPFFVQGTAEFENGANVHMVFTVNDQSTTAYFPAQSKDGFLHRLDYKVTDAKEARVTVLLLASRDSKAGVEAYLNVSTIDTDIAKH*
Ga0077121_10367958	Ga0077121_103679582	F053537	MKYMHKAIWQADGNLVIRGNTRALLFRALEDVRADLAARGEEADPLKRTLAALQDVLGEYDGPVPSAVDLLGDPAKERVSRNLLKG*
Ga0077121_10381434	Ga0077121_103814342	F008003	MIFSDLPAPAEASVLPTRICRGFAQAGNRDTLFGIMLAGS*
Ga0077121_10383152	Ga0077121_103831523	F052711	MVRGGRAALAAAMMAATGTPVAGQVLDATYRGTMVCEKLPFTSGQMREAIEVTISGGAARYSHVVRLRNAAVEAAAEQGTGTVSGTKIDLQGSWKGGS
Ga0077121_10388599	Ga0077121_103885991	F019503	RDIFKQRGWYDDRRSLQIAASIAVAVVVIGLIVWGLVWAWHYIKRYRLAMGFMSLTLGFAIIRFISLHEVDAWNANAPWARTAVDLIAAAGVALIAIARLWQLRAFALQRATEKS*
Ga0077121_10390922	Ga0077121_103909222	F059087	LKNSVCVHISFTHPPSANHPPMGAVAFAIGLKLLVPTPGNNGFRAVKDFIE*
Ga0077121_10391969	Ga0077121_103919693	F092690	AVRQGTHQARVMLGASTENDAVTDSSFPEDRNARLVRNLLALRAVLAMEQMQTGRWSERIEELDQELASLGHDMKSTAAFATECLRRTFLLPRLVSRRKRAAHGLAKQPQPQE*
Ga0077121_10404869	Ga0077121_104048692	F098177	MTNETEKTVAPGTTKVEPAVTPAPQQNQGDAKPSADKPANQQQK*
Ga0077121_10467399	Ga0077121_104673991	F012265	MDNRRIERSQLDRTESRAPEGFAGPVNDRAVDSPEFARQIAAAIHERKGTVGQAVLRELVSEFVKPTVSDPQILSTDRAIAILEQLLTTVLPQLKESEEFNQLAKTVLGEEIEQRRNLRARSLEDTPT*
Ga0077121_10480300	Ga0077121_104803001	F020707	QMCLIHRDFKHFATANAIQFRRWRKVSSIMCAKVLSIMREDPARVTSP*
Ga0077121_10500467	Ga0077121_105004672	F009763	MFRKTVHPLDLVLAVLVAVAPGMAVFYWLAINGRLPFDLLTGLSYLLVAASVMLAAVGSIVWFAVWFCSPRRG*
Ga0077121_10518317	Ga0077121_105183171	F051218	SAQEDRDPLFFAEFLIAEQAQIVGGDPFDRSAPPAPAFTSYMMCQPPELDALATQLGKELCVQSTIVADLTATGPALATAAAAPAQVSPEDIVSSDPGAISCRLDPKRSDAQLPAVACARGSYWAWYKAKWSDPLLATPAPP*
Ga0077121_10521025	Ga0077121_105210251	F027578	MDRRKFFGLSVAAGGLLAARPLYAQPTGPAYAGSPKMEVQTFRPQQQQFRIGYTTNTRGGWEGSPFVGISEGRDVGFRYFEIFGSSFCATKDGFEPAPRDTQPMKAWPDGYSWKYPTGARLKREVYYPDRWEAL
Ga0077121_10531945	Ga0077121_105319452	F075015	MAEKLSDKEIERRKKQAEMNAAAPKPHENFQQFGGKGKSGPKQAKARIQRHQGR*
Ga0077121_10561199	Ga0077121_105611992	F012265	MDNRRIERTQLDRPDQHAPDGVGGPARDRAVDPPEFARQIAAAIHERKGTVGKAILRELVSEFVKPTLADPQILSTDRAIAILEQLLTTVLPQLKESEEFNRLAKTVLGEEIEQRRNLRARRLEDTAT*
Ga0077121_10601205	Ga0077121_106012051	F105520	FLHRLLLDLQRRLGDGGAQGDPELVAALELALAVLHWDGEAPPELDAQVGLGAAVQMRLGGDGMVAWRQWRDQRRKRCALTP*
Ga0077121_10603500	Ga0077121_106035001	F012265	MDNRRIERTPLDRPEARGLEGVAGTLKDRAVDPAEFARQIAAALHERQSKFGKTILHELVSEFVKPIVADPQILSTDRSIAILEQLLTAVLPQLKETEEFNRLAKTVLGEEIEQRRHLRARRLEDTAT*
Ga0077121_10617955	Ga0077121_106179552	F072533	MLDTVQSVSLLTLVEIVGPVLLAAGLIYGIWHSRRRRSQQPKSKAGTIYAQDD*
Ga0077121_10619188	Ga0077121_106191882	F066965	RLNGQSTAKIAATVISANTNHSVIKQFPGDATPLFASADAPIYTTGGKPGN*
Ga0077121_10654761	Ga0077121_106547612	F073708	GQEPQHIARTLDQAFAMIVCRCGYSYRFEAAQEQGWLLFLIDVERPERSPDPLHSTCIKPRDAQHDLMSQAIDGRLKGHVALHGEAYLRARVARTGEGSKVYLEAAE*
Ga0077121_10713571	Ga0077121_107135712	F016724	MRTKKSILGLVYAGSEVRRAPLIGMQFLHQGAVRPADVVTPRPRLQAKDLIGLLVRHF
Ga0077121_10722829	Ga0077121_107228291	F014281	RLLHCRRYGCNGAAETDMKIYLLILLIGSLLAAIHFTSAPKQQSETLPQ*
Ga0077121_10757374	Ga0077121_107573742	F101930	GVAEMPNARLITKGSWKLITDPKRPAAVIYELDSEAPSELRDFWEVDKSTLLVLDKDLRVRRSGFGDPDTVAYALYGYHCNPGQRMRDCLHE*
Ga0077121_10762632	Ga0077121_107626321	F084157	MVIRIVAIVIWTVCIYGFLGGSFVYRENLPTGQYNLYILTMYKTLPPPPKGPSYCNFFNAGPYALALPCNLKPPFIGWLQGGKY*
Ga0077121_10765914	Ga0077121_107659142	F060073	TNMPKKSGYVSSSSGMTGLADYSRLVPSAAVGGTPGTLIGIGTQGNRTCFGLLRRSACD*
Ga0077121_10797075	Ga0077121_107970751	F047261	LPVYRYDGLEPLLAALAEKVIAPAERKVKALEERRRMIEAELIKSQ*
Ga0077121_10824090	Ga0077121_108240902	F096718	AFPAFSAVLSAKSMKEGAFKPRIIARNLLVAPPSARVNTGFA*
Ga0077121_10852910	Ga0077121_108529101	F085924	ILELPVVHNLANGRIVVRRNLDEIHACLKRHLDGNHGLDRSVVEAGLIDQLDLCVADFIVGARPVFGCSGRGSVGTANG*
Ga0077121_10869979	Ga0077121_108699792	F019507	MDARELVDIACEDDPRAPCLWLPSDLFPEFCEAIRQRPNLIGAVIYRNKTIRDGGPYSDITT
Ga0077121_10938937	Ga0077121_109389371	F052711	MVRATIAVLALAITIMTDAPAAAQVLDATYRGTMVCDKLPSTSQQTREAIEVTISGGAVRYTHVVRLRNAAVEATAEQGTGTIDGQKINLEGGWKSGSRQYEAKYSGSFVRRSARLKG
Ga0077121_10942990	Ga0077121_109429901	F095729	MKTSLRTFAFASTLLVTAAFPLLSHAQDVRREDRVTHYLEADIIDSNKDHLVSKKEFMDAMSKSWDMHMSDAQKMAPDAKAPKDKMTLQQYLEFSKMFGLNIGG*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300005511: Combined assembly of arab plate scrape MF_Col (Combined Assembly)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences