Sample 3300004689

3300004689: Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE20Aug07 (version 2)

Overview

Basic Information
IMG/M Taxon OID	3300004689 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0110170 \| Gp0088285 \| Ga0065172
Sample Name	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE20Aug07 (version 2)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Bioenergy Institute (JBEI), DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	92227011
Sequencing Scaffolds	58
Novel Protein Genes	72
Associated Families	65

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Raphidophyceae → Chattonellales → Chattonellaceae → Heterosigma → Heterosigma akashiwo	1
Not Available	47
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Lactococcus → Lactococcus garvieae	1
All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Freshwater Microbial Communities From Crystal Bog Lake, Wisconsin, Usa
Type	Environmental
Taxonomy	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater → Freshwater Microbial Communities From Crystal Bog Lake, Wisconsin, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater lake biome → freshwater lake → lake water
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline)

Location Information
Location	Crystal Bog, Wisconsin, USA
Coordinates	Lat. (^o)	46.0072	Long. (^o)	-89.6063	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000350	Metagenome	1248	N
F000784	Metagenome / Metatranscriptome	891	Y
F000787	Metagenome / Metatranscriptome	891	Y
F000924	Metagenome	832	Y
F001030	Metagenome	800	N
F001580	Metagenome	668	N
F002300	Metagenome / Metatranscriptome	573	Y
F002386	Metagenome / Metatranscriptome	565	Y
F003221	Metagenome	499	N
F004496	Metagenome / Metatranscriptome	435	N
F005227	Metagenome	407	N
F010521	Metagenome	302	Y
F010743	Metagenome / Metatranscriptome	299	Y
F013390	Metagenome / Metatranscriptome	271	N
F013499	Metagenome / Metatranscriptome	270	N
F014702	Metagenome / Metatranscriptome	260	Y
F016925	Metagenome / Metatranscriptome	243	N
F018531	Metagenome / Metatranscriptome	234	N
F019439	Metagenome / Metatranscriptome	229	Y
F019779	Metagenome / Metatranscriptome	227	N
F022586	Metagenome / Metatranscriptome	213	N
F023037	Metagenome / Metatranscriptome	211	N
F025228	Metagenome / Metatranscriptome	202	Y
F027373	Metagenome	194	N
F027409	Metagenome / Metatranscriptome	194	N
F028416	Metagenome / Metatranscriptome	191	N
F032129	Metagenome / Metatranscriptome	180	Y
F037570	Metagenome / Metatranscriptome	167	N
F039010	Metagenome / Metatranscriptome	164	N
F039941	Metagenome / Metatranscriptome	162	N
F042163	Metagenome / Metatranscriptome	158	N
F043898	Metagenome / Metatranscriptome	155	N
F045559	Metagenome / Metatranscriptome	152	N
F047673	Metagenome / Metatranscriptome	149	Y
F047956	Metagenome	149	N
F049273	Metagenome	147	N
F049374	Metagenome	146	N
F049406	Metagenome / Metatranscriptome	146	N
F050893	Metagenome / Metatranscriptome	144	Y
F051691	Metagenome / Metatranscriptome	143	N
F054474	Metagenome / Metatranscriptome	139	N
F055676	Metagenome / Metatranscriptome	138	Y
F057095	Metagenome / Metatranscriptome	136	N
F057096	Metagenome / Metatranscriptome	136	N
F057849	Metagenome	135	N
F057900	Metagenome / Metatranscriptome	135	Y
F058632	Metagenome	134	N
F062383	Metagenome	130	N
F065190	Metagenome	128	N
F065414	Metagenome / Metatranscriptome	127	N
F066437	Metagenome / Metatranscriptome	126	N
F067430	Metagenome / Metatranscriptome	125	N
F069662	Metagenome	123	Y
F071947	Metagenome	121	N
F073059	Metagenome / Metatranscriptome	120	N
F076793	Metagenome	117	N
F080806	Metagenome / Metatranscriptome	114	Y
F082055	Metagenome / Metatranscriptome	113	N
F082064	Metagenome / Metatranscriptome	113	Y
F082116	Metagenome / Metatranscriptome	113	N
F082343	Metagenome / Metatranscriptome	113	Y
F088322	Metagenome / Metatranscriptome	109	N
F096484	Metagenome	104	N
F098531	Metagenome	103	N
F102512	Metagenome / Metatranscriptome	101	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0065172_1000200	All Organisms → cellular organisms → Bacteria	2301	Open in IMG/M
Ga0065172_1000872	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Raphidophyceae → Chattonellales → Chattonellaceae → Heterosigma → Heterosigma akashiwo	1351	Open in IMG/M
Ga0065172_1002362	Not Available	1001	Open in IMG/M
Ga0065172_1003380	Not Available	906	Open in IMG/M
Ga0065172_1003819	Not Available	874	Open in IMG/M
Ga0065172_1003932	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani	865	Open in IMG/M
Ga0065172_1004388	Not Available	837	Open in IMG/M
Ga0065172_1004703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Acinetobacter → Acinetobacter baylyi	819	Open in IMG/M
Ga0065172_1005011	Not Available	804	Open in IMG/M
Ga0065172_1005130	Not Available	798	Open in IMG/M
Ga0065172_1005146	Not Available	797	Open in IMG/M
Ga0065172_1006273	Not Available	748	Open in IMG/M
Ga0065172_1006518	Not Available	739	Open in IMG/M
Ga0065172_1007227	Not Available	717	Open in IMG/M
Ga0065172_1007292	Not Available	715	Open in IMG/M
Ga0065172_1007617	Not Available	705	Open in IMG/M
Ga0065172_1007842	Not Available	699	Open in IMG/M
Ga0065172_1007869	Not Available	698	Open in IMG/M
Ga0065172_1008073	Not Available	693	Open in IMG/M
Ga0065172_1008261	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	688	Open in IMG/M
Ga0065172_1009014	Not Available	670	Open in IMG/M
Ga0065172_1009462	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	660	Open in IMG/M
Ga0065172_1009740	Not Available	654	Open in IMG/M
Ga0065172_1010143	Not Available	645	Open in IMG/M
Ga0065172_1010236	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	644	Open in IMG/M
Ga0065172_1010284	Not Available	643	Open in IMG/M
Ga0065172_1010389	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata	641	Open in IMG/M
Ga0065172_1010588	Not Available	637	Open in IMG/M
Ga0065172_1010843	Not Available	633	Open in IMG/M
Ga0065172_1011659	Not Available	617	Open in IMG/M
Ga0065172_1011754	Not Available	615	Open in IMG/M
Ga0065172_1011894	Not Available	612	Open in IMG/M
Ga0065172_1011949	Not Available	611	Open in IMG/M
Ga0065172_1012154	Not Available	608	Open in IMG/M
Ga0065172_1013331	Not Available	589	Open in IMG/M
Ga0065172_1013468	Not Available	587	Open in IMG/M
Ga0065172_1013523	Not Available	586	Open in IMG/M
Ga0065172_1014115	Not Available	577	Open in IMG/M
Ga0065172_1015067	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Chrysophyceae → Chromulinales → Chromulinaceae → Spumella → Spumella elongata	564	Open in IMG/M
Ga0065172_1015552	Not Available	558	Open in IMG/M
Ga0065172_1016330	Not Available	549	Open in IMG/M
Ga0065172_1016494	Not Available	547	Open in IMG/M
Ga0065172_1017120	Not Available	540	Open in IMG/M
Ga0065172_1017384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Lactococcus → Lactococcus garvieae	537	Open in IMG/M
Ga0065172_1017576	Not Available	535	Open in IMG/M
Ga0065172_1017592	Not Available	535	Open in IMG/M
Ga0065172_1017695	Not Available	534	Open in IMG/M
Ga0065172_1017885	Not Available	532	Open in IMG/M
Ga0065172_1017888	Not Available	532	Open in IMG/M
Ga0065172_1018174	Not Available	529	Open in IMG/M
Ga0065172_1018380	Not Available	527	Open in IMG/M
Ga0065172_1019161	Not Available	519	Open in IMG/M
Ga0065172_1019165	Not Available	519	Open in IMG/M
Ga0065172_1020137	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Cryptomonadales → Cryptomonadaceae → Cryptomonas → Cryptomonas curvata	510	Open in IMG/M
Ga0065172_1020153	Not Available	510	Open in IMG/M
Ga0065172_1020319	Not Available	508	Open in IMG/M
Ga0065172_1020830	Not Available	504	Open in IMG/M
Ga0065172_1020849	Not Available	504	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0065172_1000200	Ga0065172_10002005	F047673	MFVSEIIDEASEILATTDQNKVFRTLTQAVQILMESGHYFHTNQEVDVCTGWDGQTITLPRGIEVPLAVNIDGSPTYFRGRLFQYNVNKGGMYNPVGWAWDDRGFVATQMDIRQPSQLIAVSEHSADAGLQIRVVGTDGNNRELRTQFPDGTTADGLLVPIHAQSDFPYGTIIP
Ga0065172_1000456	Ga0065172_10004561	F010521	MKLTPAIVRNLYSAIYCMKPFDRWNMPLPEEIQFIVDKDPAVMGSYLYDTGEDYEHTVTISAARCGHLDTVIRVLCHECIHMSRHKTNKWTHHDKEFRNRAHRISSELGFDPLEL*
Ga0065172_1000872	Ga0065172_10008722	F082055	MLLKYNMQNGFLNWGKLEMEMECDDLTWKKVLTQYSDRLLSFVLNSQLNTLPTPNNLRLWGCAKNLSCGLCGKSDSVTFGHIMGGCPWVLNVENKTSPNEDRYTWRHNNVLRVLCNAIIHKVQQCNADNHKNNISGIQFVKEKASATTINTAKTQSKRKTFYGDLAGANDWTVFFELPELKELSIKHFPQDICQTKKEVDAFVISQSRKICLVGPELTVPIEERIAFWNEKKTGKYEKMIADHGSPSWKLKCIVAEVGCRGYIPPSFRKALQHFGFTSKELKKLVDECSLVSRRSSYYIWLNRFHQSFIPFQMVPIDTAAYKSIAVV*
Ga0065172_1002362	Ga0065172_10023622	F027373	MKTKEEIIGTKITFYKPPEPVGYWCLYGGGPTTKFAMFQKPTDKQIKNTTELLGWIWEDAK*
Ga0065172_1003380	Ga0065172_10033802	F066437	MTVVVLIQKCFSKRGGWPEPSKFAHFYENLLANCPYKTFFDVASLCDPANAALVETMITMEEKDANTFFEITFRGPRGGPPSSQRSAKTF
Ga0065172_1003819	Ga0065172_10038191	F014702	MNLNDTVLLSVLEKYHHYAYLFHKELEEEVKRKNFTFNKRTQILLATVIKENNRKLLWTLFPYLVLLTLAGKLFGYKTVLLIIFATNLIQQTQAETTPTTLQSLHNTLLYIRFRIHHNWLGSGFGVKQYQEMEAGLVDAIIQLQQLATPPPPKPTSASKIPIFQSNNERIHGIIHSFVNKTLNKQAEEREEAPNASGLTKQQEMVYATE*
Ga0065172_1003932	Ga0065172_10039321	F000787	NLFFINKYYSKHNKMKLFALVALFAAVEAGTPPTVGLGHAFIPANREDYDNAASLWKNNWAKYRKAHPNDQDCSISESDNWKGAQQCSQSWECRGARLCERGGWCSGYDGCEGTPLPDQAPGLSPDH*
Ga0065172_1004388	Ga0065172_10043882	F039010	MEENEDLDASGIDSHRSDDSNEVRCRFHDFMSHEIETLDQILVEMISVAENISENTIISQLKRCFEYIDNMMIYVNQFINQAQSVKMKHFIRFYSLYDGIRHSMMRTLTIINNLRKRNLFQMVPLVKDLTLDLDEIKVLVSRTTLEQVKEVLEGYRIKRSYIRRKIENFI*
Ga0065172_1004703	Ga0065172_10047031	F002386	FAFIPKQSYKIGQIIKVHGKRMRVESYTHTGKNVTVCTLVGAPKFERIVCVCTDSPAIEAVTA*
Ga0065172_1005011	Ga0065172_10050111	F000784	AFFFFFLDILALKIDRADAVPDPEPKLLDSNFVEPSKLQLLFRPSGKYAASTHYIHIRVPFNFSRLTLMPDIIFDRYHRYIEIWPEPHKTQVEQIAELSRSCLADKQNDFNNMLDALPQHEVVTREKRFLDLVALGMSSAALTLASFNTAKISHLETQIVNNNKRLDHLVDITALHKKHFKAVDNKVDDMAKQLAIILRYDKVKFSKLTDLMEQKFGMAVAISERLIHMAYSNRLSPGALDHEALVTAVKYVNEIAQNSDMLSFVHK
Ga0065172_1005130	Ga0065172_10051301	F039941	MDIETLALRLEEVRLSRLEVLEEKKVLAGELLAGSLRIELKRSIMENMSLLIQLDLTLNEAEILYESLIECRLLHARFRQQSS*
Ga0065172_1005130	Ga0065172_10051302	F037570	MNIKKLDLLKIRNLKFRASQRQVIIDRLLKKKDLEKDLWKVSVKTLIILAKIKVRCEELERISENLQQTIINGY*
Ga0065172_1005130	Ga0065172_10051303	F057095	IDDLIKKESYPLQEVITFHNKKCKILKSKDIATLEKVEIANKLLIKTLSEETRNALKEQLALVSKVGSTFTNLSLMYTYIEENDSALQSETKK*
Ga0065172_1005146	Ga0065172_10051461	F082064	MNFAWSFPQFIVNPLSNGLPNVVTAINWVCTGTDGSVTSSSSGTANLGTPNPAEFVSYDDITQSLAAQWVSQCISMLGVEELIAVQIGQLTKPISQSQTPPF*
Ga0065172_1005146	Ga0065172_10051462	F010743	MDNLELELKLTVAHINTVLKHLSAGVYSEVADLISLLHGQAKPQIETPAPETPPETPAAE
Ga0065172_1006273	Ga0065172_10062731	F065190	SPHQFMLRRPDASLYPARPICYADDLQSFASSLLGLQDTAILVSVCAMVFNLSIAVHKLRAFHYCGLSAPPEDPEALLIYSAGWTPHTALIRTSGTFKSLGVEYPVSQADSTSLQLMKQKLLVAIRALSIKKASPRSINLVMAKCLYARGAYVGILSSWSLQECEEIDTIFAAELRRRSKNLRTSQTENLYQPVREGGLGFQRFSSMVQQRKKNCVHRLLAHGDQWTQFAVQALCARGHPSPYHFSMSS
Ga0065172_1006518	Ga0065172_10065182	F054474	SNATIWTPQSGVFSNSGPTKASAPTADATNLVYRGVVFYIPYSCNITDVIFDIGTVPKDSAGTPVAVSAIQPYVSNNFATSTGVYATFANISSPAAQRYTATFVGSQLANSNATLQDFQNPYVGQDPAWYGQVVVTLAMTTTAAGLTSGQVEVTIRYNQNDMNIGNATTYPYGNFD*
Ga0065172_1007227	Ga0065172_10072271	F003221	NEFIITNNATFVLSSEILVKDLFGTELTEKRQEELYQQLCKSAESVLVNSGEKSYTMKGSEEGMRKVITRYPMRSLMKPTEKREPTITYSGMIPGEEPPYRPLLTEQIDIEQGLQELGQVSAGLVEVEDALEDWGEYHRKPKLKGALSYLDQCIVDWDEDDLKNPSAYSWEGDNYSRGYSPHLVGWSGKTGECARSLSRVSSEVPTGYRAHGLRVEGPNGSDYTGGPARSLSKVSSEVT
Ga0065172_1007292	Ga0065172_10072921	F096484	RHSTKRPIRKTFQKYKEKKGSPIKYNPDCDIQKKFDLEVMAFLVNSNLHYSFVETKGFRHFVAVTNPQYNIRSSRSMSKRMTGLLYKNLEKALQFVLEAELPDCHNVAFTYSEWAPNNNQNFVAPSIHYINRKFEFRKIALCVDIFLEPTTQQGPM*
Ga0065172_1007617	Ga0065172_10076171	F049406	LSDNPNSSYDLQEDLNSQNVADVPIISQFTQKLPISNKLDVLIPPQTLTSIPCALTDTVDLRLLTKQKNENVFFEVKSISKPNICSPEALLSFTDRDQLNIPVFNSSLEEIFIPANSQFAAIEICEESFEVFHMNFSYDNTFCVPSNNLDQIQEDSYLDEDEKEQAFLEYLKTGSYTKSMSQVIKDSPSVTEMKLQKTNPWKDQEFEQQFDLDHLPSKSKKHAIKTFKKHIDIF
Ga0065172_1007842	Ga0065172_10078421	F014702	ETRTVYAPDFNQTQCYNMPSGHQFALQISAFPPRIKMNLNDTVLLSVLEKYHHYAYLFHKELQEEVRRKNFILNKRTQILLATIIKENNRKLLWTLFPYLVLLSLAGKLFGYKTVLLIIFATNLIQQTQAEKPTTLQSLHNTLLYIRFRIQYNWLGSGFGEKQYREMEAGLVDAIMQLQQLATPPPPKPISATKIPMFQSNDERIHGIIHSFVNKTLNKQAEEREETPNASG
Ga0065172_1007869	Ga0065172_10078691	F019439	MFKGRCLSSKIRGQSQENVFSGIISSHLTKFFIILCGLVKITSGCYTLESVPEKKTIEIRTVYASEFNQTQCYNMPSSHQFALATSAVPPEINMNLNDTVLLSVLEKYHHYAYLFHKELEEEIRRKNFALNKRTQILLATVIKENNRKLLRTLFPYLALLVLAGKLLGYKTVLLLIFATNLIQQTNAKPTTIQNLYKTIAYIQLREISPWLTFTEDEFKAMETGLLDAI
Ga0065172_1008073	Ga0065172_10080731	F073059	SSSSSSNHEDRLEPSPDVLDQFKVDILSLEDGPAARIVLYNVNLPRRLWQDESSLIRIRDLVTRDFHNVSGIYFQMSATYTLVNRENGEIRTWSGSFNPRNRVISELTSHSSFQSDSFVPFVLAHSSPDWVFDKLTTGGGQLTAGKTSVWVLDEVKSIVISFQARVGVSHSFFSRYPSLNWRTRRSSRRRHGGAAAPGGGGNKRGFGFQLD*
Ga0065172_1008261	Ga0065172_10082611	F054474	VYRGVVFYLPYSCNITDVILDVGTIPKDNAGTPVAVSAIQPYVSNNFATSTGVYATFANISSPAAQRYTATFVGSQLTNSNATLQDFQNLQAGQEPAWFTQVVVTLKMTTTSAGLSSGQVEVTLRYNQNDMNIGNATTYPYGNFD*
Ga0065172_1009014	Ga0065172_10090141	F000924	RTLVHDLRVPKKWSDPTILSLVLFVINDAVNSETGVRPLDAKFGSADGIYFHLPDNASPSEITNAWVRALDEDLQHTRAVSLEYQKSLVTKRTKDTPEQLQNCFQPGDFVLHQRNPDVPLPSKLSSPYAGPYEVIQQYKNDVECRHLVMGNVTRLHVTRLKLFVGTRDEAYKVALLDADQFVIYKIHYWRGDPNKRSEMFFYTEFTDGDCVLLPYSKDLSSSA
Ga0065172_1009462	Ga0065172_10094621	F082343	MSSTYSINSSQIISLALGRLGVLEIGDTPDTNTYNNALMSLNLLIKQMSVDGLKLWKITELIIPTTSGKTSYVLGGSTSTLMYDSLNPTVAITDKPLKIIQGFYRNIQVTPNIDTPVLIVSKQEYNMLGSKFSTGTANTLFY
Ga0065172_1009740	Ga0065172_10097401	F022586	DSFYEIIHEDGDLISYEQEKLDKLLDSIIIGIKPTPELEKETEEKIQKAVEITEDIISTMDRFIEDATLAENSIFIGFHEDHQKDAKSSAMKTLDMAEKLRENNFLSLIPVIRNLTTRIEWIEFILSKTSIEQMKNTLENRKAALK*
Ga0065172_1010060	Ga0065172_10100601	F047673	MFVSQIYDEAAEILATTDQKKVFRKLTQAVQTLMESGHYFHTNQEVDVCTGWDGQTITLPRGIEVPLGVNVDGSPTYFRGRLFQYHVNKGGMYNPVDWAWDDRGFMATVMDIRQPSQLVAISEHSVDAGKQIRVVGTDSNNRELRTQFPDGTTADGILVPIHAQSDFAYGTIEPDGVTIQTRDVGVSPFTKFASTSAHQF
Ga0065172_1010143	Ga0065172_10101432	F080806	MAPHIDTAATGAIGFTAPIAAATISLDPALDLELRVLSLIIGIFVGIASFAKLVYDIWADHKNRNRK*
Ga0065172_1010236	Ga0065172_10102362	F032129	SYTGSTFLTYKVFAKNNNNGVTLNVLQQPFVALYTANRSYDPFAYSEKTDIQWQLVTNTGTVAAGIIVTGKLIQNNNNTTGVGT*
Ga0065172_1010284	Ga0065172_10102842	F013499	MSEIMKDIGTTISGIRGLIMLLQAHQRELASKGELDPSEGSLETARLAIDQLKEKIEAIVGPEESTGAEGFEVEVHESEDQSQT*
Ga0065172_1010284	Ga0065172_10102843	F051691	AGIRKNMCKVMPPLGHRVRTLHTQFTQLTDEEKDLIRPRLENALDKILIMVRKVNHNFQEEEGRNTYQDSLINE*
Ga0065172_1010389	Ga0065172_10103891	F000350	SEFTAHTMATALFTYFCTFGMFDELWSDPGSDLLSAVVAQLSEWMGVKRVISLVDRHQSNGVEGTNKQIVRHLRTLVHDLRVPKKWSDPTILSLVLFVINDAVNSETGVRPLDAKFGSADGIYFRLPENSSPSEITNAWVRALDVDLQHTRAVSLEYQKSLVVKRTQDTPEQLQNCYQPGDFVLHQRNPDAPLPTKLSSPYAGPYEVIQQYKN
Ga0065172_1010588	Ga0065172_10105882	F057849	MGKIQEWYDSWLLEQAKQAVADKRFKPKPPKYVFPREIVDALREQARDCEECERDPITGISLWPKETTLEWQAADLIDERFAEIRYYEKLREDMIELWVQMRELLGGDYDETLA*
Ga0065172_1010843	Ga0065172_10108431	F067430	MSTSSTDQTEDNKEKLVESIEAIFGLLTLLDNYCRILKDKGKPDPSKGSIETAKESIVEMAKRIKEVLEIENTKIDLTNGKA*
Ga0065172_1010843	Ga0065172_10108432	F102512	MSVRKLIDEALVTYIRREMCDNIVMLCTEMKTFAENLEKFPVEKLLLLKTEIIRVHNQIFGMMEEVKESFLQLV*
Ga0065172_1011659	Ga0065172_10116591	F019779	MKDHPAIDFIPMDAEGEEDRYSETLDSPDIKNEIECSSERCFTPPEDDWEIINRGSDFIIHGLETLDEQLDIIATRIDTENKKEEILKNIRKGFSIIDDIVLYTTTFINEANKAKVEKFKGFISDLLDFAKTNITKTLVIVRKLRARSLLSLIPLTKDLIMEQKH
Ga0065172_1011754	Ga0065172_10117542	F098531	MANVSAYRFVGPTTAISVSGTSSTSVTITPNGNDQANFCGFLNTGANPV
Ga0065172_1011894	Ga0065172_10118941	F057900	WKGFDDLVAQIVHENVTFGYCGLCWDDLRDWKPEFLRQDYTFFSIETPQVTDQTPIWGRKRRYQIAELLPVLENPPLSAAAGWHINNLVESINNAIPAGRTLDADDDARRYEDWIREGSYGASYENDAKYVELGEILVREPHGKISRYLFDDKSGKEICTQVDRYNKMSKCLALFSVEIGSGNLMSSRGAGRDLYNTHVAVEKA
Ga0065172_1011949	Ga0065172_10119491	F055676	INELNDNIIGIDFMHRNKLIYDVNTRQVKFADEKMNTICAIKQVTIPAMTSCIITTKFNGETHPEKTYIATIHCPGSPTVTGVPSLVTIDNDQNCKVVIENCAPYEVTIERNDIMGIIEMEEDTLYPLTDEAAAGICAIIKDKIPNTPRTRLTKEDISRRCHLQVPDQFKGKYLDLLYKYQEAISIDKYDLGLARNYKHKIHL
Ga0065172_1012154	Ga0065172_10121541	F016925	TQHIVATNGIVRPVGPTDLRDLMGIPRIPVAKTIQPEIVIDLEKLEEIDISKTSGIKRELLMIARNRAIRQLQKNIDDLVNGDQTQSELQKFRKIQDTLKRVKAIDPSWKVKLNF*
Ga0065172_1012154	Ga0065172_10121542	F023037	MNESQYNPSRLMTPAAAKLELISEIQASLNAIDSEESFGYNIQKVMRLYHAIERLKQIEPFWLFEVRVISAAGTLV*
Ga0065172_1012718	Ga0065172_10127181	F049374	PLNATNLSIEGNLVISGANPTLGSGWGTNPSILASNTFCFKVTVGTGGAANGTINLPTAYNGWLGFAADVTSGNAVFLQLTGSTASSVTFTSYSVTTGAAANMTAGDIVLVNCIAY*
Ga0065172_1012718	Ga0065172_10127182	F025228	MTTPSNSAVQNLLPVQAYFNVDGSFNTFIGQGKPFYATANPVQSGLAITNSTLDSSPIGSITPSTGAFTNISTTTGTIS
Ga0065172_1012839	Ga0065172_10128392	F076793	FYTEFTDGDCVLLPYSKDLSSSAPFDEYIHSEPMLFPLRFNSDDAPKRITVLKRQPITSVNVGDTFFLDLRYFGYSWYDNLELPDAYVTTHVVACEYIEWRVHRRYRYIRVRCPVFDEMLTDWDNFDVFTYGSIRVLLDLTHTLVDQAFCVAHPNVLPTRSRERLLRLYSNRN*
Ga0065172_1013331	Ga0065172_10133311	F005227	EEPDEETELVLDAVGALVRAQVDRPLSMREGEFQAGGVSVSVFKVLFDTGALHKSYISADLVERYRDSWSSCIFPHRAVACLADQATKIETNEVVRGTLTFVADDGSTEYSGQVEAIVWNMPGMDFILGLPDITRNFVDLLTSMLRVTTNEVSSVVLETEMRPGEIMQWSTGEVEESPEEEDTPVPVAFGPVLAFM
Ga0065172_1013468	Ga0065172_10134682	F062383	MSDIKSKDISDIILQIGPKNSLSKYVNYNTILNLIVEEISKFPNLGLLKLNTHVELELIKLVMSIVENVVHKKNPLAIDKMNLVCDILKNVFSLSPIEIDILKKQIQYIFDNNQIVKIPI
Ga0065172_1013523	Ga0065172_10135231	F018531	GEIIDINDTNAKIKFKNKVKVLNVAKLKHFFENVKKSAEKESEANEFNQNFNQQSENERPDFNDFNDIFIKAHSEGPITRAKAKLIKYKDAAQLALLLLKSETDTINSLCDPGQNCGRCESEETYLAESKMLPFQWRQLKLAENRCKQWQLKLMKREAEKINSTEERCHSNVPVRFREPLMKVAYKLLSRDEATF
Ga0065172_1014115	Ga0065172_10141151	F001030	GTREEAYKAALLDADQFVIARIHYWRGNPEKRSEMFFYVEFDDGDKVLLPYSKDLSAAAQFEDFVYSEPQLFPLRFNAADAPKRVTAMRKEPIRNVEIHDVFYLDLRYWGYDWFDALDLPNAYVTTYVVPCEYVAWVTRRRYRFIQVRCPLFDEVLFTLWDHYYVFAFGSIRELTASHTLVTEEFCLLYPAV
Ga0065172_1015067	Ga0065172_10150671	F000350	EMFKQVHGGRKLHFGARRTWQAFNKTFPGHGVAFRQIQEAINQCPLCQKDRLGMDNYVLPVVRHLKKEHPRKAVGVDCLTVTPVDEEGNTCLIVIVEFFTKYVWALPAKEYSAHTAAVALFQYFCTFGMFDELWSDPGANFMSEVVSKLSEWMGVRRVISLVDRHESNGVEGTNKQIIRHLRTLVHDL
Ga0065172_1015552	Ga0065172_10155521	F002300	SNLTSPGNLTRASETLAFIQATNKEIYDQMDQALERIERSMRRIPELAEKMSRSTRTAEPRQALDQAAAILGKYKPEPQYQLSEYATGNRRRWKRDTGAGSNDSQTARTAPKAETIAEYFIYNLASTLFPFTGFTSIGAALQIATGIKRSKRAPSVYPFEVTDLLEYEARKKHSQNKILGEKIAKI
Ga0065172_1016330	Ga0065172_10163302	F028416	MERQAANGHAIINRPERHPNVFRLRRTWLKVAGEALDLLNLIDVAQSNTAADNTLVFEAIYDKVKQLKRIDPDKLVNQDTMVQATVIKYDCPNCLPTDNIYLADYELD
Ga0065172_1016494	Ga0065172_10164942	F025228	MAVNDSVTQNLLPVQAYFNLDGSFNTFIGQGQPFYASINPVQSGLTITNSTIDS
Ga0065172_1017120	Ga0065172_10171201	F001580	GTREEAYKAALLDADQFVIRRIHYWRGNPEKRSEMFFLVEFDDGDKVLLPYSKDLSSSAQFEEFIFAEPQLFPLRFNAADAPKRITAMRREPIRNIALHDVIYVDLRYWGYEWFDTLDLPNAYVTTYVVACEYVAWHTHRRYRYVKVRCPLFDEVLSDLWDYYYVYIYGSISTLNDTHTL
Ga0065172_1017384	Ga0065172_10173841	F004496	STAQHSSAQHSTTQHNTTPTLPERHRNQNVEDSTTHLQTTMADQPQPLAGGSGVINPPVAQNVVINPAAQQAAAQLAQQILANTNVTLKQEIVKIPEFFGEKLKDTVTAQEFMLRIDECQVSNDWNDVTTFANFRLCLRGEAEEWLSSTVRHLKLTPAQKTWTRIRPLFKREFATTSD
Ga0065172_1017576	Ga0065172_10175761	F045559	NYKYVKLTGISNVINSLCGTDFSNESLMHHRMNRIHVLKWKIKNIDPNWHLADQVALMEHQILDLLDGIDHMKPWNEVGNKLKYMALFSIIENLRKLHPIWGIHLESLETPEKNHWCKCYKCHEARMQKYKIVIQDNPETEKLDESS*
Ga0065172_1017592	Ga0065172_10175921	F027409	IATDQGEKIKDNFDKSALPHDFKINDSVWYEDFSPLGKNAKLTPKWQGPAKITEINDTNARILLANGKTKILNIMRIKKFFKSENSNNENKTVSGSDELNFNAKPEFTGPVTRAMKKLLEQQNATNLAISVLCDLSKKHCSMCEWEQECSDNPLLFDPIFARQYIKERQSWLINKQSM
Ga0065172_1017695	Ga0065172_10176951	F082116	YKVAQLHLRDLEDMEESIAILRKSLPVVPNRNTGKIPVQAQYAPPQGAHVVNMQAYTDTHDHLLTLIPEKTPVNLRTNSQGSVEITEPRNITRTNPAVKATGPTITKSGRHRGSRRANREDQTTPEFIWGRKWVIPERGTSQPLTEEAMDRMTVVRPKREILGGIALGVAVAATAMG
Ga0065172_1017885	Ga0065172_10178851	F065414	MSEPEVVINLNNLEELNIHKAKGLRKELLYIIRNRAYRQLYSLLNKVAASKKEKDNKERFKIIFKVLKRIKAMEPDNHLNLASYIVSRNGV*
Ga0065172_1017888	Ga0065172_10178881	F001030	IQQVKNDVECRHLVMGNIKVLHVTRLKLFVGDREEAYKLALLDADQFVIRRIHYWRGNPEKRSEMFFFTEFTDGDSVLLPYSQDLRSSVQFDEYIYAEPQLFPLRFNASDANKRINALRREPIRTVELGSVIYVDLRYWGYDWYDGLDLPNAYVTTHVVACEYLRWRTHRRYRFVQV
Ga0065172_1018174	Ga0065172_10181741	F000784	CLSTAFIFFFLDILALKMNTAYAVPDPEPKLLDSNFVEPSKLQLLFRPSGKYAASTHYIHVRVPFNFSRLTLMPSVIFDRYHRYIEVWPEPSRTQVEEVAELSRSVLQDKYNDFKNQLDALPQYEVVTRDKRFLDLVSLGMSTAALTLSTFNTVKISHLETQIVNNNKRLDHLVDI
Ga0065172_1018178	Ga0065172_10181781	F088322	AVTISPEEYHPPARRRAVPRIPTGRNQSEVQDWVYGYPLTPQTPTVDRRGRIIKPKTRYDPEDEEQRHRNLRQQARQRALATQAMSTPRVENLAEDTSLKEVGVQEDFSGAISTKAQTQKKSNFGSRKTPSKRS*
Ga0065172_1018380	Ga0065172_10183801	F043898	MLSLSTLSLSLSIPFPILILTSFLMRIFSNERLHTHRVMVTAPAVLAAAASAPSTVPRYFQSQVEMTGKKRMHPENVAAIKNRFLELFIFRRPPQDERDLELCDCFNRKHFIVGTFERALALLEKHQPSDFHGPALYAYVISALGKNAPLVEQVTSGDQE
Ga0065172_1019161	Ga0065172_10191611	F047956	LYTMKASAGATTSYRATIPSQNKSVFNCGDVMIFQIPCGRKNSYLDGQNSYLKICIQNNDVTAANVLNLDHSGYGLINQLTVFQSGNLIEQISNYNVLLNGLIDFQMDGSSSMGYSTILGTAPKTSESLISNGTAVANNAVLGTLNTTLNSLRSGNQIPASGRLTLCLPIVS
Ga0065172_1019165	Ga0065172_10191651	F058632	MDEQLSNKHYQTYYDPKDKKLLFNVTGTRPTASDWLNNINLGLGIGFKESKRYQEAHKGLRDAKQKYNAQNAVVTAHSKGGLIANYISSKGDNVVTLDAAQTIGNKSQSGSKNYRTNGDIVSLLGANKHNTINLSNPNKQTGNIVHDILNAHDIKNIKNEKLFV*
Ga0065172_1020137	Ga0065172_10201371	F071947	SMGYLDSLPLVQSTNHNLSGSVKLDLDLLKPWRVSAAAAPRDDDASPPVRHRSQEQPSQVWLQYAYRKHHPALQWLPTKLAEWIANNMQDELGFPDKADPRRGWTPAELNSILQNHVVRDRNGCALTTFGCVEWESELYRGVMHARCYQWNMPKHRFHKMNPQVIPGYPW
Ga0065172_1020153	Ga0065172_10201531	F013390	KNRKCTHTVKIADESSENILGIDFLQKFRLHLDPKTKEITFQSAPSRALFATKNFTIPPFATTLVQARTFQNIDHQLHYIADIGVPKQPLISGLSTLVSFDHRNQCTMPIQNCAPHEVNVSTGDIIGILSTEKEDPIPFDDNSLATICEQIHQRLPKVKKRAWTRKEIE
Ga0065172_1020319	Ga0065172_10203192	F069662	MDTKKLVPYSVYLPIEHHTKLKEFAKDRQASALIRDAIGMLVDGTDVFRTGYNKGIRDAAKVIYDCEEAQMIAIKGKDLGVVLS
Ga0065172_1020371	Ga0065172_10203711	F049273	LELGAGPAHGAPQGDDLDPHVTTRGTSKKTVRFNPEIVERVERMEAVAQAQSAELQSTQESLTTVSSKLSVQDIVIEDLAKKVDEFEEAFYVITEMRKVSDLAEAKEEHSESTASGDAMPVHPREPRASTCTNDPETAFTYADLRGRADTPQHRTSRGVQAQEEDQEE
Ga0065172_1020830	Ga0065172_10208301	F050893	MEEIIIKIGEIERLVMLLLIQKEKLEEREEADPSKGSIHKTLLAIKQLNRKLEIIPGNKKLRTSEELEMKVRKNE*
Ga0065172_1020849	Ga0065172_10208491	F057096	TTEHSQGIKQVMLFVTKAHVQAWITSLKHKVDTAGDCEICDLEKILGEESLEIAEAVKMALSNRNEETRSRVLRGLLEKTTTKIEALSVRVSQTPQP*
Ga0065172_1020849	Ga0065172_10208492	F042163	MNLTVKITEQIEKKLEAVLKGKYDNRTIWMYYKVSLQMLRDIIEDLIACHHTTHPLAEKDLYYEQNKVQI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300004689: Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE20Aug07 (version 2)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences