Sample 3300003555

3300003555: Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_17_M020 (Metagenome Metatranscriptome)

Overview

Basic Information
IMG/M Taxon OID	3300003555 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0099541 \| Gp0089010 \| Ga0008453
Sample Name	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_17_M020 (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	26692968
Sequencing Scaffolds	30
Novel Protein Genes	37
Associated Families	34

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Erwiniaceae → Erwinia → Erwinia mallotivora	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Heliobacteriaceae → Heliomicrobium → Heliomicrobium modesticaldum	1
Not Available	7
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis	4
All Organisms → Viruses → Predicted Viral	2
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	2
All Organisms → cellular organisms → Eukaryota	3
All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	1
All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Phaeocystales → Phaeocystaceae → Phaeocystis → Phaeocystis antarctica	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	1
All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	1
All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Marine Archaeal Communities From Monterey Bay, Ca, That Are Ammonia-Oxidizing
Type	Environmental
Taxonomy	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater → Marine Archaeal Communities From Monterey Bay, Ca, That Are Ammonia-Oxidizing

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	marine biome → intertidal zone → sea water
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline)

Location Information
Location	Monterey Bay, California, USA
Coordinates	Lat. (^o)	36.25	Long. (^o)	-122.2099	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Associated Families

Family	Category	Number of Sequences	3D Structure?
F000049	Metagenome / Metatranscriptome	3277	Y
F000155	Metagenome / Metatranscriptome	1877	Y
F000237	Metagenome / Metatranscriptome	1498	Y
F000480	Metatranscriptome	1090	Y
F000787	Metagenome / Metatranscriptome	891	Y
F000798	Metagenome / Metatranscriptome	886	Y
F001293	Metagenome / Metatranscriptome	729	Y
F002590	Metatranscriptome	545	N
F003248	Metatranscriptome	497	N
F003424	Metagenome / Metatranscriptome	487	Y
F005848	Metagenome / Metatranscriptome	388	Y
F006424	Metagenome / Metatranscriptome	373	Y
F009426	Metagenome / Metatranscriptome	318	Y
F012917	Metagenome / Metatranscriptome	276	Y
F016399	Metagenome / Metatranscriptome	247	Y
F017317	Metagenome / Metatranscriptome	241	Y
F019482	Metagenome / Metatranscriptome	229	Y
F020014	Metagenome / Metatranscriptome	226	Y
F027998	Metagenome / Metatranscriptome	193	Y
F031748	Metatranscriptome	181	N
F046638	Metagenome / Metatranscriptome	151	Y
F047695	Metagenome / Metatranscriptome	149	N
F059360	Metagenome / Metatranscriptome	134	Y
F062376	Metagenome / Metatranscriptome	130	N
F064770	Metagenome / Metatranscriptome	128	Y
F067105	Metagenome / Metatranscriptome	126	Y
F070259	Metagenome / Metatranscriptome	123	Y
F074943	Metatranscriptome	119	N
F080848	Metatranscriptome	114	N
F081750	Metagenome / Metatranscriptome	114	Y
F085780	Metagenome / Metatranscriptome	111	Y
F091179	Metatranscriptome	107	N
F097458	Metagenome / Metatranscriptome	104	Y
F099846	Metagenome / Metatranscriptome	103	N

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
Ga0008453J51685_102445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Erwiniaceae → Erwinia → Erwinia mallotivora	522	Open in IMG/M
Ga0008453J51685_103060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Heliobacteriaceae → Heliomicrobium → Heliomicrobium modesticaldum	1193	Open in IMG/M
Ga0008453J51685_103434	Not Available	1393	Open in IMG/M
Ga0008453J51685_104470	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis	633	Open in IMG/M
Ga0008453J51685_104946	All Organisms → Viruses → Predicted Viral	1408	Open in IMG/M
Ga0008453J51685_104965	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
Ga0008453J51685_105370	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Ciliophora → Intramacronucleata → Spirotrichea → Oligotrichia → Strombidiidae → Strombidium → Strombidium rassoulzadegani	517	Open in IMG/M
Ga0008453J51685_106246	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis	627	Open in IMG/M
Ga0008453J51685_106318	All Organisms → cellular organisms → Bacteria → Proteobacteria	803	Open in IMG/M
Ga0008453J51685_106656	Not Available	536	Open in IMG/M
Ga0008453J51685_107009	All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	673	Open in IMG/M
Ga0008453J51685_107255	Not Available	1037	Open in IMG/M
Ga0008453J51685_107365	All Organisms → cellular organisms → Eukaryota	618	Open in IMG/M
Ga0008453J51685_107534	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis	570	Open in IMG/M
Ga0008453J51685_108048	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	595	Open in IMG/M
Ga0008453J51685_108693	All Organisms → cellular organisms → Eukaryota	1283	Open in IMG/M
Ga0008453J51685_108733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	614	Open in IMG/M
Ga0008453J51685_109191	Not Available	864	Open in IMG/M
Ga0008453J51685_109852	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Phaeocystales → Phaeocystaceae → Phaeocystis → Phaeocystis antarctica	595	Open in IMG/M
Ga0008453J51685_111725	All Organisms → Viruses → unclassified viruses → Circular genetic element sp.	558	Open in IMG/M
Ga0008453J51685_112751	All Organisms → Viruses → Predicted Viral	1169	Open in IMG/M
Ga0008453J51685_113066	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	1320	Open in IMG/M
Ga0008453J51685_113220	Not Available	597	Open in IMG/M
Ga0008453J51685_118443	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	541	Open in IMG/M
Ga0008453J51685_119620	Not Available	516	Open in IMG/M
Ga0008453J51685_122248	All Organisms → cellular organisms → Bacteria	869	Open in IMG/M
Ga0008453J51685_122925	Not Available	725	Open in IMG/M
Ga0008453J51685_126871	All Organisms → cellular organisms → Eukaryota	549	Open in IMG/M
Ga0008453J51685_133584	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda	765	Open in IMG/M
Ga0008453J51685_134770	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Multicrustacea → Hexanauplia → Copepoda → Neocopepoda → Gymnoplea → Calanoida → Temoridae → Eurytemora → Eurytemora affinis	510	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0008453J51685_102445	Ga0008453J51685_1024451	F019482	MKCQIYKSVVGSGRWSSLGNISFLSHSSDVNDLLEGLDGVLEDWLDRLHDTESSLHIVDLWLHAFDGLHLSGDFDEWLSIIKSLEDSGGKGFLDVLDGSGLGNGGVSISSGLGHLSGGKVGSELGKELILGHEVVLVGSNGGDKGAGEFHL*
Ga0008453J51685_102875	Ga0008453J51685_1028751	F000155	FSFQMKFTLAIAAVAANRYDHMNEDELLVNLSSTLSSALASEARGDGDAAVAKTAAIKNIQKSLTARILKRLDDGQPLVEVARKMKAIEGMQP*
Ga0008453J51685_103060	Ga0008453J51685_1030601	F059360	MIVTLFKEVLVPANLVPAAAVIREGQALPVITGRTESVDCTISYMLKFKAQL*
Ga0008453J51685_103434	Ga0008453J51685_1034342	F085780	MRSKLKSLKIVQVLPNGCVHFDHLVYLKTYTRYNFSKKSLFFSLLDKKKLFFENSNFFYKKYRNQSV
Ga0008453J51685_104140	Ga0008453J51685_1041401	F000155	LILTMKFACLIAVVAASKYDQMNEDELLVSLESTLSSAQRSEARGDGDAAVAKTAAIKNIQKALTARILKRLDDGQPLVEVARKMKAIEGMQP*
Ga0008453J51685_104470	Ga0008453J51685_1044701	F017317	AKKAQLMKMAKNRQCGADETECPAGCCPEANWFCCPDNMYCAATAADCPFVAKKAQLMKMAKNRQCGADETECPAGCCPEANWFCCPDNMYCAATAADCPFVAKKAQLMKMAKNRQCGADETECPAGCCPEANWFCCPDNMYCAATAADCPFVAKKAQLMKMAKNRQCGADETECPAGCCPEANWFCCPDNMYCAATAADCPFVAKKAQL
Ga0008453J51685_104946	Ga0008453J51685_1049462	F099846	MSTYLGLRSIDELVNYTYNRTPDEILKAGFSTTDPGTGGNYNPLFGAMAWANFNMEANIFAALPKYVWDFSGWRIFDTKAPNLTTVAGARDGLGGTIEGGAIAPAIKPGVQEITVKPKTLQYVFEASELLEQLVDNSRDDNYGSLAQQRVYASDQFKERVNLMLTAIPTDVVATNALERLNLESLDVIVASYAEQQFEAHANLTDLYNPWKGANGAGVNRNAAAATWDSTVKSPSGTIGTADVLTDAVLRDTLADIRIAAGKEPTVMIGGQDTYSEVQSIYMNAYRIQNTADLRTEFSVGVNGVDTFTGTGAGLHISTIYGLPFIPSKDTTQSAEGSVDDLFILNTSADKNAPNKPLLGMQVLKPIVYYEAGKRQQGYPFINEAFTDRALYNMLGETTCRNFKAQAKIRDIASGI*
Ga0008453J51685_104965	Ga0008453J51685_1049653	F027998	IILSDELTNTSAAEIGITTITTANITLLKNALNEGVILITDLTF*
Ga0008453J51685_105370	Ga0008453J51685_1053701	F000787	MKFILATIVAAVSAGAPPAVGLGHGIIPATREDFDNSKGVWGGDWAKYRAAHPNDQDCSVSESDNWKGAQQCSQSWECRGARLCERGGWCSGYDGCEGTPLPNQAPGLAADC*
Ga0008453J51685_106246	Ga0008453J51685_1062461	F000480	LGLTMKFFALAFLVAAASAKDIRLNLLAPPTELEYGFCDGSPTPMTFDVISVAPFPILVQNGASITLEVQITLNEEVAVGAQVDLNIVLEGIIPIKIPCLDIEGLHIGSCHYDGDELLATASDFLCPTYVPEGQACALPLGPGVYGGGDPLVIGPIESIPDILLPFLKGTVRAEATVTDAAGATVACVYVRAAVDH*
Ga0008453J51685_106318	Ga0008453J51685_1063181	F031748	FKLGIDKMKVGAALLGLLPSVASILVSSDCREGEGSLYDHSLTLLMDGRNVSLSELSGKVVLLTNVASY*
Ga0008453J51685_106656	Ga0008453J51685_1066561	F009426	LIKSQAKMEIKLAATKVNKNLKLLPNMTISEILYTIIFFMTTSPCVISAGAARETLFEGKADYCMIECE*
Ga0008453J51685_107009	Ga0008453J51685_1070092	F005848	MPLPVQRTYQNTDAVPPALNVTAFMHDLQTGQNNFLVLTPNVLQDMVMNPPMAATQLYEFNLVKNGNATSVRSFSTALDPASSGRVSIGNVNMSSGNYQWSVKQTAGVVASPQILVRYGSPLN
Ga0008453J51685_107255	Ga0008453J51685_1072552	F097458	LHRSYKLPPISLSFAFAALLPRRGIYALAGTPKIDFQHAMPIDSRYELLGSPILVDTRTLVVRSQGSR*
Ga0008453J51685_107365	Ga0008453J51685_1073651	F006424	LEIGITALGSGWVNAVFVRDNFPEFGTDLVTALSSLNMYDF
Ga0008453J51685_107534	Ga0008453J51685_1075341	F002590	GSSLTMKVVAALVTLALHQATADWSGSGEFSCYGHVSTDVSSPEGGDHLGEGTMRCNIIEWGGGPLGPEAMFFKPNGGAEFEIWAWDYHDWDNEHWPMPYATCEGQIWYKKDDMGAGYCTPHKGFTGCGYGHCVGDIVCIGC*
Ga0008453J51685_108048	Ga0008453J51685_1080481	F001293	LIDKPMIRNSLICKLINVQPSMKENNEKKMKNEDEISKLTKAPPKDTAALDKRSVLAKVNSQGSGT*
Ga0008453J51685_108693	Ga0008453J51685_1086933	F070259	MKSESLVIVNQHVTVNDLSNFAHTAHHARKVVPAGHLLGALYTP*
Ga0008453J51685_108733	Ga0008453J51685_1087333	F020014	FMLFKTSYKDEPRPEYEPKKKSVNKPRAASPPTVATIQSGTLPISLILIKFF*
Ga0008453J51685_109191	Ga0008453J51685_1091912	F020014	NWLNNSYKDEPRPEYAPKKNSVNKPRAASPPTVATIQRGTLPISLILIIVIKK*
Ga0008453J51685_109451	Ga0008453J51685_1094511	F047695	VSADPGGVNIVTPTVSGNWAEYPATVDPNNANKYSYTFAEGVTSAEFVWKVYGTSAGDVQESLTSLVGGGAIENNLAATLPTGNGINTDYSTYCNRTVASDSGDFVAPTFVFNSFRQVGVTYTELVLTADSGDSYAIDYSVNDYSEYHGPGATDNGDGTYTVIVDPSSAFTYLRNDIT
Ga0008453J51685_109452	Ga0008453J51685_1094521	F047695	SYTFAEGVTSAEFVWKVYGTSAGDVQESLTSLVGGGAIENNLAATLPTGNGINTDYSTYCNRTVASDSGDFVAPTFVFNSFRQVGVTYTELVLTADSGDSYAIDYSVNDYSEYHGPGATDNGDGTYTVIVDPSSAFTYLWYNITTSTQEDLSACDSSNRDHAAGDSEADSFGVCPTSTSQTITVSIDVSADPGGVNIVTPTVSGNWAEYPATVDPNNANKY
Ga0008453J51685_109852	Ga0008453J51685_1098521	F091179	LLFPRMLSVVASSALSLNIGTSALTSARAAPSMAAALETKFVYERPAPIGTTTGPEYPNTALHAPKLEGVVGKVVPTNMNGKSPKFLQQDFLFGNPKRPGVYSEQCTPPSMGENRRSWQAYHAPF*
Ga0008453J51685_111725	Ga0008453J51685_1117251	F016399	KRFTRSARRGSKSIGSSLKTGVIGEVVKGIGAGSLVNVVMSRVAPGSSITPIASTGAAFLAGGVVGGAANLVLSGGLSQLGGIFGGGATAPQQEFGV*
Ga0008453J51685_112751	Ga0008453J51685_1127511	F003248	LILLRSQHKMARLLLVGLVALCVASTKAAVIPMEELVDGLQNFLTAPEESGLRLKRSTGEWDKEFDLSSMGILFQLKYTNPANPFEGGRAHVKVPGARFVRNAPFDDMEMDIEFNGGSAIDGLFDMKVDYKFIQKFMFLADRPQEGSFVLYRKMEGGMWKTRVTIDNNNRMPKPFLDIAVESDRKTKLHVLFNFEEDNKWELKIDRVPGQKMTIEAVIDGQKWTGVGTLNQGDMKLNLKVDSEFTGKHYTLDFDLNPAGMWGIHVTGDVDGPVDAKWTMQKDFTMGEIVVKYKNQNYAFMQLKGNAEMRGMFPVMFDYVVKYNINDVVEHQGKAKMKFDGKTPAKKFEMSFAPKTGTPMDLVWNVDFSSGFKYDYDFKVNAVTMEKGNG
Ga0008453J51685_113066	Ga0008453J51685_1130661	F046638	MIKTLKNSIFKNLVVLIHGPIILLNNPNKKLTFKELESINPFISLLGFRLNNKIYSRKQIKNLKKMSYIENISIFHNSIKTFTKLPYKFKNKKI
Ga0008453J51685_113220	Ga0008453J51685_1132202	F074943	MNMAEETVNMMNDAIASQGSDIDESQRQIKRLLEENLEIWKANL
Ga0008453J51685_118443	Ga0008453J51685_1184432	F081750	MGQKTDARIFRQGVGKKKLRIENIEKNNEESSLYLYKTLEIQKYITRFFGLYKMKIHNCKIFYSESSLQIFISFYVTKKTIYIINKTLTKYSKKL
Ga0008453J51685_119620	Ga0008453J51685_1196201	F003424	IELGVGRWISVGFEHVPDSISTPENINDNRGTEGNVTRSTTATVSVDFNDMNTTYLKLNTPMGIYLKWGNVSTDLDIKETMASGNTYKNTSVDGTSTGIGYQKTFGERGFGFRLEGNYVELDNITVNNGVTKTAGTGLNNFKEIQAKNLEGLTAKVALTYTFGRSGNSF*
Ga0008453J51685_120177	Ga0008453J51685_1201771	F000237	KHLNTDQLVRLMVLHYLTPYYLYLVQLHAMFCHESDSDSGENTLEDKSGTYISFYDAFLKEIQDAWYTLFVFVYFWNHHFSPSTVNYFFFERNTRELDEIRFYGVAPHYFRPFMGLLVVTPTHYEGLMMGLLGLLATLPILYNFYNVNNHYLAVIPMQSSILQTGGFILYMLSMYCMVSMLPCGRYYYDPEGGYVGDP*IKFSYQYA
Ga0008453J51685_122248	Ga0008453J51685_1222481	F012917	ILLKFLRFPLNDCGYYEKYASLAEVNQAWDKKKHLRRKRWSQE*
Ga0008453J51685_122925	Ga0008453J51685_1229251	F067105	ETSAPVQENVQTPTETSVVEATPEVANTEVAPKESVTNSEELMKLVIDQESELGSTKTALEKAQSELVKLQAQWKEREDNERLHTKSKAEALSKALVDSWSASLPADMMTDENKQAIFTMAQKFPEQSVKMMEIAHKASKKYKQDIDSLRSQQQIKQKRALESRVTDIITKKRRFQPETTSVVHAASVKKANPFCFGTSKTSSSMKSVRETNPHLFSALAGFSSGNLRDRMGQIANISGN
Ga0008453J51685_126871	Ga0008453J51685_1268711	F062376	GTVASWSAGLVPHQPPSRAAVSHNRAAAQMVDMETIIGVGVTLLGVGGGVGLIALTENAGKRNDEMANQQVCFECKGANVIDCSLCKGTGTDPFADLVKGVQEMAAGDVPPPPPASDKIKIDDWDAGEKEVVMFEEILADYPVKATEKVCLRCSGRGVVVCDNCDGTGIQPRFLERYSPDDF
Ga0008453J51685_128443	Ga0008453J51685_1284431	F000049	MAFWQENYQFIKEIYEMRHTKMAEWMENVEKAIARIMADKVYTSAEFKRERDNFQALCKDLERTEVKKWLNQILEILMAERAKSQQETENEKLNLLIKKHEELIPSVQKTSVMVDLYWKCYAYGDELKPHIEFLDGIMLSSTRDIAPSCVENVDELIERQEKSLVQLDTKRNVVNELIEKGTKILENPDKP
Ga0008453J51685_130770	Ga0008453J51685_1307701	F064770	FNLKTYKSIKIRHYFRTINCFFFFHGGSINNKNWIKVEQNLANHKLKYYRILNKLMVKALKNSIFKNLIVLIHGPIFLLSGNNANLTFKELENINPFIGLLSLKLNNKIYSKEQIKNCQKLSYLSNVSNFHNSLKTITRTPYYKLKSGKNSPLSK*
Ga0008453J51685_133584	Ga0008453J51685_1335841	F000798	VKRIQEGWDDTKKKAQDRLKLLQDTKEAWVGYAENNETIAAQFEVAEAEIKLVKKRYNLEDALSDMKKRQDLYNKSNNTISGLFKSINDNFTCMSITLPEDKKKLVDKEIKAVEAKLEVVGRFKDTVKVIEDFCAALVNFDNSLKAVDGWKDAATAELKDIKEASGAMLPEDRVASTMDLQEDIAAKLEILKGCAATEAALLPQGAGVDAHAQAFKDELKRITDYVTNLAGDTKIECDKYSNDVKFWAEYRTGIK
Ga0008453J51685_134770	Ga0008453J51685_1347701	F080848	FPMHKFCYKKSDKGCPGVCNYKYTLSGKGYPCFSDHSNTDCAWCNKEGWQCEQNSITGPDSNKGSRCQARTNQKYCASQQGDCKHIGYCDPNATCKKKANVGKFGQYWQCECNKGWSGNGIQCMDSNGTLSAMPGQQVEVTLTMTAGLYDEAPVQNEFNHGAAMESLLSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300003555: Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - Metatranscriptome CAN11_17_M020 (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences