| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300003309 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0110137 | Gp0103705 | Ga0057736 |
| Sample Name | Guam |
| Sequencing Status | Permanent Draft |
| Sequencing Center | |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 113479370 |
| Sequencing Scaffolds | 7 |
| Novel Protein Genes | 9 |
| Associated Families | 8 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora | 1 |
| Not Available | 3 |
| All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa | 1 |
| All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora → Acropora digitifera | 1 |
| All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Cnidaria Microbial Communities From The Caribbean, With Black Band Disease |
| Type | Host-Associated |
| Taxonomy | Host-Associated → Invertebrates → Cnidaria → Unclassified → Unclassified → Cnidaria → Cnidaria Microbial Communities From The Caribbean, With Black Band Disease |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | Unclassified |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Animal → Animal surface |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | Luminao reef flat, Guam | |||||||
| Coordinates | Lat. (o) | 13.4644 | Long. (o) | 144.6439 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F000221 | Metagenome / Metatranscriptome | 1543 | Y |
| F005840 | Metagenome / Metatranscriptome | 388 | Y |
| F008935 | Metagenome / Metatranscriptome | 325 | Y |
| F014703 | Metagenome / Metatranscriptome | 260 | Y |
| F023524 | Metagenome / Metatranscriptome | 209 | Y |
| F028418 | Metagenome / Metatranscriptome | 191 | Y |
| F036052 | Metagenome | 170 | Y |
| F052317 | Metagenome / Metatranscriptome | 142 | Y |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| Guam_1001440 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora | 4009 | Open in IMG/M |
| Guam_1004060 | Not Available | 4961 | Open in IMG/M |
| Guam_1034840 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa | 720 | Open in IMG/M |
| Guam_1057260 | Not Available | 544 | Open in IMG/M |
| Guam_1057261 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Astrocoeniina → Acroporidae → Acropora → Acropora digitifera | 544 | Open in IMG/M |
| Guam_1063601 | Not Available | 516 | Open in IMG/M |
| Guam_1072944 | All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Cnidaria → Anthozoa → Hexacorallia → Scleractinia → Faviina → Merulinidae → Orbicella → Orbicella faveolata | 616 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| Guam_1001440 | Guam_10014404 | F014703 | MGNVAEKQGLPLQQHFPYKFSYSFKTSDCHKISCFNDGGLKFGHFDILDMLFPFLAFVKL |
| Guam_1004060 | Guam_10040603 | F036052 | MARQEVKRTLKFGFQVYRQFVCEEGFQDFCVGPILIANYILISPQFKK* |
| Guam_1034840 | Guam_10348401 | F052317 | MAAGENRFAAELTEDELSKLLDNATPANTKKATKYSMKIFQGNKFC* |
| Guam_1051246 | Guam_10512461 | F000221 | VAIQVKATEQYFPVVLFIMLYKVVITFESVDEILKCDNSNESY* |
| Guam_1056862 | Guam_10568621 | F000221 | VDEIRTVIIQMKATEQCFPAVLFIMLYKVVLTFQSLDEILKCDHSKESY* |
| Guam_1057260 | Guam_10572601 | F005840 | VFLAGYTVAMVTYCVTEMITMCSPMIGHFFDTMIVESSDKEWL* |
| Guam_1057261 | Guam_10572612 | F023524 | MQKAIISETRRRLGDGFREHLRDVEKHDKDASKPAARHFNLPNHSNKHMSICSLSLHQGTTDSPKNLEQRFIFQIGTLNPQHQRTLFIQLIYSGFSRHQV |
| Guam_1063601 | Guam_10636012 | F028418 | MIDLKYCFECDWFIELSDNKLSDNNLASELVENRSFLNQSQTRKL* |
| Guam_1072944 | Guam_10729441 | F008935 | MIGQMAIVIALLGFNNLGCSVTPTFLFRNRFYLQLSPHCPKMNKKSMWEVKKISRFLSSGHGILPSCGCKAHETMVAKCELVL* |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |